NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F089144

Metagenome / Metatranscriptome Family F089144

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F089144
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 94 residues
Representative Sequence MGLFDRWRSAADGLSAEGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Number of Associated Samples 97
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.39 %
% of genes near scaffold ends (potentially truncated) 39.45 %
% of genes from short scaffolds (< 2000 bps) 78.90 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (70.642 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(9.174 % of family members)
Environment Ontology (ENVO) Unclassified
(29.358 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.119 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.26%    β-sheet: 14.74%    Coil/Unstructured: 40.00%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF01523PmbA_TldD 44.04
PF07759DUF1615 2.75
PF13442Cytochrome_CBB3 2.75
PF13458Peripla_BP_6 0.92
PF00005ABC_tran 0.92
PF01872RibD_C 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0312Zn-dependent protease PmbA/TldA or its inactivated homologGeneral function prediction only [R] 44.04
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.92
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.92

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms70.64 %
UnclassifiedrootN/A29.36 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c0830127All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria635Open in IMG/M
3300000891|JGI10214J12806_10749160Not Available719Open in IMG/M
3300001305|C688J14111_10020033All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1967Open in IMG/M
3300001686|C688J18823_10148470All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1609Open in IMG/M
3300002568|C688J35102_117736985All Organisms → cellular organisms → Bacteria → Proteobacteria502Open in IMG/M
3300004156|Ga0062589_100988199All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae785Open in IMG/M
3300004156|Ga0062589_102376293Not Available546Open in IMG/M
3300004157|Ga0062590_100180331All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1496Open in IMG/M
3300004479|Ga0062595_102248236Not Available536Open in IMG/M
3300004480|Ga0062592_101766007Not Available604Open in IMG/M
3300004643|Ga0062591_100803814All Organisms → cellular organisms → Bacteria → Proteobacteria868Open in IMG/M
3300005093|Ga0062594_100036475All Organisms → cellular organisms → Bacteria2339Open in IMG/M
3300005294|Ga0065705_10287012All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae1087Open in IMG/M
3300005330|Ga0070690_100017425All Organisms → cellular organisms → Bacteria → Proteobacteria4319Open in IMG/M
3300005332|Ga0066388_101423172All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae1206Open in IMG/M
3300005332|Ga0066388_104807930All Organisms → cellular organisms → Bacteria → Proteobacteria687Open in IMG/M
3300005340|Ga0070689_100146569All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1902Open in IMG/M
3300005354|Ga0070675_100893927All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria814Open in IMG/M
3300005355|Ga0070671_101337939All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria632Open in IMG/M
3300005364|Ga0070673_100028943All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria4126Open in IMG/M
3300005365|Ga0070688_101192340Not Available611Open in IMG/M
3300005441|Ga0070700_100897519All Organisms → cellular organisms → Bacteria → Proteobacteria721Open in IMG/M
3300005444|Ga0070694_100619801Not Available873Open in IMG/M
3300005526|Ga0073909_10307155Not Available723Open in IMG/M
3300005539|Ga0068853_101627138All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria626Open in IMG/M
3300005547|Ga0070693_100333672Not Available1033Open in IMG/M
3300005617|Ga0068859_100059442All Organisms → cellular organisms → Bacteria → Proteobacteria3851Open in IMG/M
3300005841|Ga0068863_100432043All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1291Open in IMG/M
3300005841|Ga0068863_100808912All Organisms → cellular organisms → Bacteria → Proteobacteria935Open in IMG/M
3300005843|Ga0068860_100202910All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae1922Open in IMG/M
3300006046|Ga0066652_101424386All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria647Open in IMG/M
3300006049|Ga0075417_10040157All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1981Open in IMG/M
3300006194|Ga0075427_10060445All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria663Open in IMG/M
3300006237|Ga0097621_101537989Not Available632Open in IMG/M
3300006572|Ga0074051_11613807Not Available665Open in IMG/M
3300006573|Ga0074055_11767746Not Available1028Open in IMG/M
3300006575|Ga0074053_11767158Not Available1700Open in IMG/M
3300006575|Ga0074053_12001541All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria825Open in IMG/M
3300006581|Ga0074048_13407732Not Available502Open in IMG/M
3300006604|Ga0074060_11889068All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria673Open in IMG/M
3300006852|Ga0075433_10420269All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1179Open in IMG/M
3300006854|Ga0075425_100940851All Organisms → cellular organisms → Bacteria → Proteobacteria987Open in IMG/M
3300006854|Ga0075425_101980454Not Available652Open in IMG/M
3300006904|Ga0075424_100092510All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3182Open in IMG/M
3300006954|Ga0079219_10479472Not Available862Open in IMG/M
3300009098|Ga0105245_12128519Not Available615Open in IMG/M
3300009156|Ga0111538_10337280All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1908Open in IMG/M
3300010046|Ga0126384_10054726All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2770Open in IMG/M
3300010375|Ga0105239_10276417All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1890Open in IMG/M
3300010397|Ga0134124_10005919All Organisms → cellular organisms → Bacteria → Proteobacteria9817Open in IMG/M
3300010400|Ga0134122_10199596All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1658Open in IMG/M
3300010400|Ga0134122_11015322All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria814Open in IMG/M
3300010403|Ga0134123_10190004All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1738Open in IMG/M
3300011107|Ga0151490_1641275Not Available509Open in IMG/M
3300011442|Ga0137437_1021959All Organisms → cellular organisms → Bacteria → Proteobacteria2195Open in IMG/M
3300012469|Ga0150984_107864111All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria645Open in IMG/M
3300012495|Ga0157323_1029296Not Available575Open in IMG/M
3300012685|Ga0137397_10195280All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1505Open in IMG/M
3300012905|Ga0157296_10023840All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1230Open in IMG/M
3300012922|Ga0137394_10019294All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria5447Open in IMG/M
3300012951|Ga0164300_10768979All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria593Open in IMG/M
3300012960|Ga0164301_10478804Not Available892Open in IMG/M
3300012984|Ga0164309_10096286All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1857Open in IMG/M
3300012985|Ga0164308_10714551All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium865Open in IMG/M
3300013308|Ga0157375_11175994Not Available899Open in IMG/M
3300015371|Ga0132258_10866355All Organisms → cellular organisms → Bacteria → Proteobacteria2280Open in IMG/M
3300015371|Ga0132258_11443531All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1738Open in IMG/M
3300015373|Ga0132257_101692951All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria811Open in IMG/M
3300015374|Ga0132255_104949118Not Available564Open in IMG/M
3300018083|Ga0184628_10006901All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria5440Open in IMG/M
3300019361|Ga0173482_10768424Not Available507Open in IMG/M
3300022886|Ga0247746_1140515Not Available611Open in IMG/M
3300024177|Ga0247686_1030394Not Available635Open in IMG/M
3300024178|Ga0247694_1010826Not Available1082Open in IMG/M
3300024182|Ga0247669_1010490Not Available1696Open in IMG/M
3300024219|Ga0247665_1008374All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1145Open in IMG/M
3300024224|Ga0247673_1006939All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1425Open in IMG/M
3300024224|Ga0247673_1015381All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1003Open in IMG/M
3300024325|Ga0247678_1000215All Organisms → cellular organisms → Bacteria → Proteobacteria13048Open in IMG/M
3300025927|Ga0207687_11831907Not Available519Open in IMG/M
3300025934|Ga0207686_10078876All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2142Open in IMG/M
3300025939|Ga0207665_10802750Not Available744Open in IMG/M
3300025941|Ga0207711_10203138All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1809Open in IMG/M
3300026142|Ga0207698_10588386All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1096Open in IMG/M
3300027821|Ga0209811_10068500All Organisms → cellular organisms → Bacteria → Proteobacteria1238Open in IMG/M
3300027873|Ga0209814_10040595All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium1935Open in IMG/M
3300027909|Ga0209382_10052582All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4847Open in IMG/M
3300028065|Ga0247685_1000393All Organisms → cellular organisms → Bacteria → Proteobacteria5737Open in IMG/M
3300028281|Ga0247689_1000547All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3688Open in IMG/M
3300028381|Ga0268264_10120932All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2307Open in IMG/M
3300028792|Ga0307504_10113568All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria879Open in IMG/M
3300031152|Ga0307501_10003349All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2116Open in IMG/M
3300031184|Ga0307499_10001327All Organisms → cellular organisms → Bacteria → Proteobacteria7366Open in IMG/M
3300031538|Ga0310888_10260051Not Available978Open in IMG/M
3300031538|Ga0310888_10318833All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria893Open in IMG/M
3300031547|Ga0310887_10049255All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium1882Open in IMG/M
3300031720|Ga0307469_10424305All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1143Open in IMG/M
3300031740|Ga0307468_100047046All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2219Open in IMG/M
3300031740|Ga0307468_101435080Not Available636Open in IMG/M
3300031740|Ga0307468_101817505All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria577Open in IMG/M
3300031820|Ga0307473_10041861All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2097Open in IMG/M
3300031892|Ga0310893_10014731All Organisms → cellular organisms → Bacteria → Proteobacteria2204Open in IMG/M
3300031913|Ga0310891_10158052All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria739Open in IMG/M
3300031944|Ga0310884_10056426All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium1782Open in IMG/M
3300032000|Ga0310903_10494737All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria637Open in IMG/M
3300032012|Ga0310902_10566544Not Available750Open in IMG/M
3300032012|Ga0310902_11082884All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria560Open in IMG/M
3300032017|Ga0310899_10158585Not Available972Open in IMG/M
3300032180|Ga0307471_100131260All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2361Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.26%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.42%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.59%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.67%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.75%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.75%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.83%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.83%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.92%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.92%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.92%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006194Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012495Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610Host-AssociatedOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300022886Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5EnvironmentalOpen in IMG/M
3300024177Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27EnvironmentalOpen in IMG/M
3300024178Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35EnvironmentalOpen in IMG/M
3300024182Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10EnvironmentalOpen in IMG/M
3300024219Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06EnvironmentalOpen in IMG/M
3300024224Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14EnvironmentalOpen in IMG/M
3300024325Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028065Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26EnvironmentalOpen in IMG/M
3300028281Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_083012722228664022SoilAGHSAERPGLDALAADMTRQGVIIITRNGGGYTVYWTRRADERPPRQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTTR
JGI10214J12806_1074916013300000891SoilMGLFDRWRSAGDGLSTEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEAL
C688J14111_1002003323300001305SoilMGFLDRWRRAADCLFPVGPGLDALTADMTKQGIVIITRNGAAYTVYWTRMPDERPARQGSVLKRSVEGAGATVLEALLDCRAQALKQREATQTTR*
C688J18823_1014847023300001686SoilMGFFDRWRRAADCLFPVGPGLDALAADMTKQGIVIITRNGAAYTVYWTRMPDERPARQTSVLKRSVEGAGATVLEALLDCRAQALKQREATQTTR*
C688J35102_11773698513300002568SoilMGFLDRWRRAADCLFPVGPGLDALTADMTKQGIVIITRNGAAYTVYWTRMPDERPARQGSVLKRSVEGAGATVLEALLDCRAQALKQREATQTTR
Ga0062589_10098819923300004156SoilMGLFDRWRSVGHGLSLGGQGLDALAADMTRQGVIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGAGATVLEALLDCRAQALKQRGEGPLL*
Ga0062589_10237629323300004156SoilRRMGLFDRWGSAGDGPSAEGQGLDALAADMTKQGVIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKATRTTR*
Ga0062590_10018033123300004157SoilMGLFDRWRSAADGLSAEGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKATRTTR*
Ga0062595_10224823623300004479SoilGDGPSAEGQGLDALAADMTKQGVIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKATRTTR*
Ga0062592_10176600713300004480SoilKGKGRRMGLFDRWRSAGDGLSTEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKATRTTR*
Ga0062591_10080381433300004643SoilKGKGRRMGLFDRWRSAGDGPSAEGQGLDALAADMTKQGVIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKATRTTR*
Ga0062594_10003647513300005093SoilMGLFDRWRSVGDGLFVERPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQA
Ga0065705_1028701223300005294Switchgrass RhizosphereMGLFDRWRIAGDRLSAEGQGFDALAADMTKQGVIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALRDCRVQALKQRKATRTTR*
Ga0070690_10001742533300005330Switchgrass RhizosphereMGLFDRWRSAADGLSAEGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR*
Ga0066388_10142317223300005332Tropical Forest SoilMGLFDRWRNAGDGPSSGEQGFDALAADMTRQGVIIITRNGGAYTVYWTRRVEERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRTPR*
Ga0066388_10480793023300005332Tropical Forest SoilMGLFDRWRSVGDGLSAERPGLDALAADMTKQGVLIITRNGGGYTVYWTRTPDERPTRQNSIQILKRSVEGEGATVLEAMLDCRAQALKQRKGTRAPR*
Ga0070689_10014656923300005340Switchgrass RhizosphereMGLFDRWRSVGDGLFVQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKATRTTG*
Ga0070675_10089392713300005354Miscanthus RhizosphereRSVRRGRKGKGRRMGLFDRWRSAADGLSAEGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR*
Ga0070671_10133793923300005355Switchgrass RhizosphereRMGLLDRWRSVGGGLSAERPGLDALAADMTKQGVLIITRNGCGYTVYWTRTPDERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKATRTTG*
Ga0070673_10002894323300005364Switchgrass RhizosphereMGLFDRWRSVGDGLFEQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRAQALKQRKATRTTG*
Ga0070688_10119234023300005365Switchgrass RhizosphereMGLFDRWRSVGDGLFVERPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKAT
Ga0070700_10089751923300005441Corn, Switchgrass And Miscanthus RhizosphereMGLFDRWRSVGDGLSAERPGLDALAADMTKQGVLIITRNGGGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRAQALKQRKATRTTG*
Ga0070694_10061980123300005444Corn, Switchgrass And Miscanthus RhizosphereMGLFDRWRSVGDGLFVERPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKATRTTG*
Ga0073909_1030715513300005526Surface SoilMGLFDRWRSAGDEPSAEGQRLDALAADMTKQGFIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR*
Ga0068853_10162713823300005539Corn RhizospherePRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKATRTTG*
Ga0070693_10033367223300005547Corn, Switchgrass And Miscanthus RhizosphereMGLFDRWRSVGDGLFVQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRAQALKQRKATRTTG*
Ga0068859_10005944213300005617Switchgrass RhizosphereRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKATRTTG*
Ga0068863_10043204313300005841Switchgrass RhizosphereERSVQRGRKGKGRRMGLFDRWRSAADGLSAEGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR*
Ga0068863_10080891223300005841Switchgrass RhizosphereMGLFDRWRSVGDGLFEQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKATRTTG*
Ga0068860_10020291013300005843Switchgrass RhizosphereGDGLFVERPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKATRTTG*
Ga0066652_10142438623300006046SoilRRMGLFDRWRSVGDCLSVGGQGLDALAADMTRQGVIIITRNGAAYTVYWTRTPDERPARQTSVLERSVEGAGATVLEALLDCRAQALKQRKATPDCGEGALF*
Ga0075417_1004015723300006049Populus RhizosphereMGLFDRWRSVGAGLSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRADERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0075427_1006044513300006194Populus RhizosphereGKGRRMGLFDRWRSVGAGLSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRADERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0097621_10153798923300006237Miscanthus RhizosphereMGLFDRWRSVGDGLFVQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRAQA
Ga0074051_1161380713300006572SoilMGLFDRWRSSGDGPSVEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKGTRTTR*
Ga0074055_1176774613300006573SoilMGLFDRWRSAGAGLSTEGQGLDALAAEMTKQGVIIITRNGGAYTVYWTRRAEERPARQTSVLKRSVEGEGATVLEALL
Ga0074053_1176715823300006575SoilMGLFDRWRSAGAGLSTEGQGLDALAAEMTKQGVIIITRNGGAYTVYWTRRAEERPARQTSVLKRSVEGEGATVLEALLD
Ga0074053_1200154113300006575SoilMGLFDRWRSARDGPSVEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKGTRTTR*
Ga0074048_1340773223300006581SoilMGLFDRWRSARDGPSVEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLRRSVEGEGATVLEALLDCQAQALKQRKATRTTR*
Ga0074060_1188906823300006604SoilMGLFDRWRSAGAGLSTEGQGLDALAAEMTKQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKGTRTTR*
Ga0075433_1042026923300006852Populus RhizosphereMGLFDRWRSVGAGLSAERQGLDALAADMTRQGVIIITRNGSAYTVYWTRRADERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0075425_10094085123300006854Populus RhizosphereMGLFDRWRNAADALPVEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQASILKRSVEGAGATVLEALLDCRAQALKQRKATRTTR*
Ga0075425_10198045423300006854Populus RhizosphereMGLFDRWRSVGDDLSAERPGLDALAADMTKQGVLIITRNSGGYTVYWTRTPTERPTRHNSIQILKRSVEGEGATVLEAMLDCRAQALKQRK
Ga0075424_10009251053300006904Populus RhizosphereMGLFDRWRSVRTGLSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRADERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0079219_1047947213300006954Agricultural SoilMGLFDRWRSVGDDLSAERPGLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKATRTTG*
Ga0105245_1212851913300009098Miscanthus RhizosphereMGLFDRWRSVGDGLFVQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRA*
Ga0111538_1033728013300009156Populus RhizosphereMGLFDRWRSVERGLSAERQRLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLRRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0126384_1005472623300010046Tropical Forest SoilMGLFDRWRSVGDGLSAERPGLDALAADMTKQGVLIITRNCGGYTVYWTRTPDERPTRQNSIQILKRSVEGEGATVLEALLDCRAQALRQRKATRTPR*
Ga0105239_1027641723300010375Corn RhizosphereMGLFDRWRSVGDGLFEQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRAQALKHRKATRTTG*
Ga0134124_1000591993300010397Terrestrial SoilMGLFDRWRSVRTGLSAERQGLDALAADMTRQGVIIITRNGSAYTVYWTRRADERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0134122_1019959623300010400Terrestrial SoilMGLFDRWRSAGDGPSVEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKGPRTTR*
Ga0134122_1101532213300010400Terrestrial SoilLSAERQGLDALAADMTRQGVIIITRNGSAYTVYWTRRADERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0134123_1019000423300010403Terrestrial SoilMGLFDRWRSVGDGLFEQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRAQALRQRKATRTPR*
Ga0151490_164127523300011107SoilMGLFDRWRSAGDGPSAEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRAEERPARQTSVLKRSVEGEGATVLEALLDCQAQALKQRKATRTTR*
Ga0137437_102195923300011442SoilMGLFDRWRSAGDGPSAEGRGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALRDCQAQALKQRKATRTTR*
Ga0150984_10786411113300012469Avena Fatua RhizosphereMGLFDRWRSVGDGLSLGGQGLDALAADMTRQGVIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGAGATVMEALLDCRAQALKQRKATPTTR*
Ga0157323_102929623300012495Arabidopsis RhizosphereMGLFDRWRIAGDCLSAEGQGFDALAADMTKQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0137397_1019528023300012685Vadose Zone SoilMGLFDRWRSAGDVLPTEGPDLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRTTR*
Ga0157296_1002384013300012905SoilMGLFDRWGSAGDGPSAEGQGLDALAADMTKQGVIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKATRTTR*
Ga0137394_1001929433300012922Vadose Zone SoilMGLFDRWRSAGDGLPTEGEDLDALAAEMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKARRTTR*
Ga0164300_1076897923300012951SoilEGQGLDALAADMTKQGFIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR*
Ga0164301_1047880423300012960SoilMGLFDRWRSAADGLSAEGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQ
Ga0164309_1009628623300012984SoilMGLFDRWRSAADGLSAEGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKATRSTR*
Ga0164308_1071455123300012985SoilMGLFDRWRSAGDGPSVEGQGLDALAADMTKQGFIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR*
Ga0157375_1117599423300013308Miscanthus RhizosphereMGLFDRWRSVGDGLFVERPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRTQALKQRKATRTTG*
Ga0132258_1086635533300015371Arabidopsis RhizosphereMGLFDRWRSVRTGPSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0132258_1144353113300015371Arabidopsis RhizosphereVRTGLSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0132257_10169295113300015373Arabidopsis RhizosphereKGRRMGLFDRWRSVSDGPSSEGRGLDALAADMTKQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR*
Ga0132255_10494911823300015374Arabidopsis RhizosphereMGFFDRWRSVGDGLSAERPRLDALAADMTKQGVLIITRNGGGYTVYWTRTPNELKRSVEGEGATVLEAMLDCRTQALKQRKATRTTG*
Ga0184628_1000690183300018083Groundwater SedimentMGLFDRWRSAGDGPSAEGRGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALRDCQAQALKQRKATRTTR
Ga0173482_1076842423300019361SoilMGLFDRWRSAADGLSAEGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Ga0247746_114051523300022886SoilRGRKGKGRRMGLFDRWGSAGDGPSAEGQGLDALAADMTKQGVIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRTQALKQRKATRTTR
Ga0247686_103039413300024177SoilMGLFDRWRSVGDGLFVQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKATRTTG
Ga0247694_101082623300024178SoilMGLFDRWRSVERGLSAERQRLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR
Ga0247669_101049023300024182SoilMGLFDRWRSVGDGLFEQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLDAMLDCRAQALKQRKATRTTG
Ga0247665_100837423300024219SoilGRKGKGRRMGLFDRWRSAADGLSAEGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Ga0247673_100693923300024224SoilMGLFDRWRSVGDGLFVQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRAQALKQRKATRTTG
Ga0247673_101538113300024224SoilMGLFNRWRSLGGGLSAERPGLDALAADMTKQGVLIITRNGGGYTVYWTRTPDERPTRQNSIQILKRSVEGEGATVLEAMLDCRAQALRQRKAARTPR
Ga0247678_100021513300024325SoilMGLFDRWRSVGDGLFVQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLE
Ga0207687_1183190713300025927Miscanthus RhizosphereMGLFDRWRSVGDGLFVQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRA
Ga0207686_1007887613300025934Miscanthus RhizosphereQTSSERSVRRGRKGKGRRMGLFDRWRSAADGLSAEGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Ga0207665_1080275013300025939Corn, Switchgrass And Miscanthus RhizosphereLFDRWRSVGDGLFVQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLGRGVAPVKSS
Ga0207711_1020313833300025941Switchgrass RhizosphereGPGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Ga0207698_1058838623300026142Corn RhizosphereMGLFDRWRSAADGLSAEGPGLDALAADTTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Ga0209811_1006850023300027821Surface SoilMGLFDRWCSAGDARSAEGQGLDALAADMTKQGFIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKGWYVPFRRYGEFISAAE
Ga0209814_1004059523300027873Populus RhizosphereMGLFDRWRSVGAGLSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRADERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR
Ga0209382_1005258263300027909Populus RhizosphereMGLFDRWRSVGAGLSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR
Ga0247685_100039383300028065SoilMGLFDRWRSVGDGLFVERPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCR
Ga0247689_100054733300028281SoilMGLFDRWRSVGDGLFEQRPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRAQALKQRKATRTTG
Ga0268264_1012093233300028381Switchgrass RhizosphereMGLFDRWRSVGDGLFVERPRLDALAADMTKQGVLIITRNGSGYTVYWTRTPNERPTRQNSIQILRRSVEGEGATVLEAMLDCRAQALKQRKATRTTG
Ga0307504_1011356813300028792SoilMGLFDRWRSAEDGLSADRPGLDALAADMTKQGVLIITRNGGGYTVYWTRSPDERPTRQNSVQILKRSVEGEGATVLEAMLDCRAQALKQRKATRATR
Ga0307501_1000334923300031152SoilMGLFDRWRSAGDGPSAEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLRRSVEGEGATVLEALQDCRAQALKQRKATRTTR
Ga0307499_1000132773300031184SoilMGLFDRWRSAGDGPSAEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQARKQRKATRTTS
Ga0310888_1026005113300031538SoilMGLFDRWCSAGDARSAEGQGLDALAADMTKQGFIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRTTR
Ga0310888_1031883323300031538SoilVRRGRKGKGRRMGLFDRWRSVRTGPSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR
Ga0310887_1004925523300031547SoilMGLFDRWRSVRTGPSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR
Ga0307469_1042430523300031720Hardwood Forest SoilRGRKGKGRRMGLFDRWRSAADGLPAEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Ga0307468_10004704633300031740Hardwood Forest SoilFDRWRSAADGLAAEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Ga0307468_10143508023300031740Hardwood Forest SoilMGLFDRWRSAGDGPSAEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKPTRTT
Ga0307468_10181750523300031740Hardwood Forest SoilMGLFDRWRSAEDGLSAAGQGLDALAADMTRQGVLIITRNGGAYTVYWTRRADERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRTTR
Ga0307473_1004186133300031820Hardwood Forest SoilQRGCKGKGRRMGLFDRWRSSGDGPSVEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Ga0310893_1001473123300031892SoilMGLFDRWRIAGDRLSAEGQGFDALAADMTKQGVIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRTTR
Ga0310891_1015805223300031913SoilSVRTGPSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR
Ga0310884_1005642623300031944SoilMGLFDRWRSVRTGPSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Ga0310903_1049473723300032000SoilERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR
Ga0310902_1056654413300032012SoilMGLFDRWRSAADGPSTEGQGLDALAADMTKQGFIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR
Ga0310902_1108288413300032012SoilRMGLFDRWRSVRTGLSAERQGLDALAADMTRQGVIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR
Ga0310899_1015858513300032017SoilMGLFDRWCSAGDARSAEGQGLDALAADMTKQGFIIITRNGAAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATGTAR
Ga0307471_10013126023300032180Hardwood Forest SoilMGLFDRWRSAADGLPAEGQGLDALAADMTKQGFIIITRNGGAYTVYWTRRPDERPARQTSVLKRSVEGEGATVLEALLDCRAQALKQRKATRSTR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.