Metagenome Family F089138

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089138
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	129 residues
Representative Sequence	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Number of Associated Samples	87
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.80 %
% of genes near scaffold ends (potentially truncated)	41.28 %
% of genes from short scaffolds (< 2000 bps)	83.49 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.083 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.596 % of family members)
Environment Ontology (ENVO)	Unclassified (29.358 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.211 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 78.46% β-sheet: 0.00% Coil/Unstructured: 21.54%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF04951	Peptidase_M55	19.27
PF14534	DUF4440	5.50
PF07589	PEP-CTERM	3.67
PF00487	FA_desaturase	0.92
PF13204	DUF4038	0.92
PF00011	HSP20	0.92
PF01904	DUF72	0.92
PF00474	SSF	0.92
PF01068	DNA_ligase_A_M	0.92
PF13474	SnoaL_3	0.92
PF14499	DUF4437	0.92
PF12695	Abhydrolase_5	0.92
PF01066	CDP-OH_P_transf	0.92
PF12680	SnoaL_2	0.92
PF00753	Lactamase_B	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.92
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.92
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.92
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.92
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.92
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.92
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.92

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.08 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.08 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.08 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.49 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.42 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	78.90 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.42 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	77.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.50 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.92 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.92 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	77.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.50 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.92 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	77.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.50 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	0.92 %
Unclassified	root	N/A	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0649327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	557	Open in IMG/M
3300000881\|JGI10215J12807_1102859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1843	Open in IMG/M
3300001139\|JGI10220J13317_10540793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1453	Open in IMG/M
3300001431\|F14TB_102008087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	960	Open in IMG/M
3300004013\|Ga0055465_10054921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1082	Open in IMG/M
3300004114\|Ga0062593_101928505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	654	Open in IMG/M
3300004463\|Ga0063356_100736839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1363	Open in IMG/M
3300004463\|Ga0063356_101128985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1132	Open in IMG/M
3300004463\|Ga0063356_104403731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	606	Open in IMG/M
3300005289\|Ga0065704_10440053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	715	Open in IMG/M
3300005289\|Ga0065704_10840214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	512	Open in IMG/M
3300005295\|Ga0065707_10875285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	574	Open in IMG/M
3300005328\|Ga0070676_11035632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	617	Open in IMG/M
3300005331\|Ga0070670_101941831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	542	Open in IMG/M
3300005333\|Ga0070677_10229643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	911	Open in IMG/M
3300005356\|Ga0070674_100021132	All Organisms → cellular organisms → Bacteria	4172	Open in IMG/M
3300005543\|Ga0070672_100295325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1373	Open in IMG/M
3300005546\|Ga0070696_100525253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	945	Open in IMG/M
3300005549\|Ga0070704_100417168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1149	Open in IMG/M
3300005577\|Ga0068857_100581705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1057	Open in IMG/M
3300005719\|Ga0068861_100102050	All Organisms → cellular organisms → Bacteria → Proteobacteria	2283	Open in IMG/M
3300005719\|Ga0068861_101122744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	756	Open in IMG/M
3300005840\|Ga0068870_10077329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1830	Open in IMG/M
3300006196\|Ga0075422_10062730	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300006844\|Ga0075428_100262459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1859	Open in IMG/M
3300006844\|Ga0075428_100486007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1321	Open in IMG/M
3300006845\|Ga0075421_100164666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2766	Open in IMG/M
3300006845\|Ga0075421_100195016	All Organisms → cellular organisms → Bacteria	2510	Open in IMG/M
3300006845\|Ga0075421_100947701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	978	Open in IMG/M
3300006846\|Ga0075430_101373837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	581	Open in IMG/M
3300006876\|Ga0079217_10431756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	791	Open in IMG/M
3300006880\|Ga0075429_100952904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	751	Open in IMG/M
3300006894\|Ga0079215_10189469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1029	Open in IMG/M
3300006894\|Ga0079215_10371708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	829	Open in IMG/M
3300006918\|Ga0079216_11698940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	538	Open in IMG/M
3300006969\|Ga0075419_10975132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	615	Open in IMG/M
3300007004\|Ga0079218_10033948	All Organisms → cellular organisms → Bacteria → Proteobacteria	2995	Open in IMG/M
3300007004\|Ga0079218_10188454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1559	Open in IMG/M
3300009094\|Ga0111539_10021840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	7870	Open in IMG/M
3300009094\|Ga0111539_10109611	All Organisms → cellular organisms → Bacteria	3240	Open in IMG/M
3300009094\|Ga0111539_10215902	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300009147\|Ga0114129_11170572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	959	Open in IMG/M
3300009147\|Ga0114129_11780007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	750	Open in IMG/M
3300009176\|Ga0105242_10369446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1330	Open in IMG/M
3300009610\|Ga0105340_1161578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	928	Open in IMG/M
3300012902\|Ga0157291_10082384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	838	Open in IMG/M
3300012904\|Ga0157282_10051465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1009	Open in IMG/M
3300012905\|Ga0157296_10149999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	696	Open in IMG/M
3300012907\|Ga0157283_10197039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	632	Open in IMG/M
3300012910\|Ga0157308_10036447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1207	Open in IMG/M
3300012912\|Ga0157306_10001833	All Organisms → cellular organisms → Bacteria	3977	Open in IMG/M
3300012916\|Ga0157310_10090249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	968	Open in IMG/M
3300013308\|Ga0157375_10976148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	988	Open in IMG/M
3300015200\|Ga0173480_10017859	All Organisms → cellular organisms → Bacteria	2931	Open in IMG/M
3300015200\|Ga0173480_10116067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1322	Open in IMG/M
3300015201\|Ga0173478_10017935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1965	Open in IMG/M
3300017792\|Ga0163161_11183501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	660	Open in IMG/M
3300018079\|Ga0184627_10099965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1530	Open in IMG/M
3300018429\|Ga0190272_10117064	Not Available	1756	Open in IMG/M
3300018469\|Ga0190270_10156619	All Organisms → cellular organisms → Bacteria → Proteobacteria	1860	Open in IMG/M
3300018469\|Ga0190270_11033539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	850	Open in IMG/M
3300019356\|Ga0173481_10313655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	734	Open in IMG/M
3300023057\|Ga0247797_1005205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1419	Open in IMG/M
3300023066\|Ga0247793_1015325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1083	Open in IMG/M
3300023066\|Ga0247793_1034186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	776	Open in IMG/M
3300023072\|Ga0247799_1051671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	684	Open in IMG/M
3300023261\|Ga0247796_1027220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	917	Open in IMG/M
3300023263\|Ga0247800_1121835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	544	Open in IMG/M
3300023266\|Ga0247789_1023408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1048	Open in IMG/M
3300025893\|Ga0207682_10073474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1452	Open in IMG/M
3300025907\|Ga0207645_10120469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1703	Open in IMG/M
3300025908\|Ga0207643_10201644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1212	Open in IMG/M
3300025917\|Ga0207660_11436702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	558	Open in IMG/M
3300025934\|Ga0207686_10406955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1038	Open in IMG/M
3300025940\|Ga0207691_10036989	All Organisms → cellular organisms → Bacteria → Proteobacteria	4521	Open in IMG/M
3300025972\|Ga0207668_10053332	All Organisms → cellular organisms → Bacteria	2802	Open in IMG/M
3300026118\|Ga0207675_101716932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	648	Open in IMG/M
3300026782\|Ga0207595_100553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1046	Open in IMG/M
3300026803\|Ga0207549_108350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	513	Open in IMG/M
3300026976\|Ga0207525_102836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	823	Open in IMG/M
3300027364\|Ga0209967_1024382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	893	Open in IMG/M
3300027364\|Ga0209967_1070500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	545	Open in IMG/M
3300027378\|Ga0209981_1054680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	607	Open in IMG/M
3300027395\|Ga0209996_1012656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1135	Open in IMG/M
3300027397\|Ga0207463_101537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	721	Open in IMG/M
3300027400\|Ga0207560_103464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	627	Open in IMG/M
3300027526\|Ga0209968_1005442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1916	Open in IMG/M
3300027543\|Ga0209999_1060378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	721	Open in IMG/M
3300027552\|Ga0209982_1000813	All Organisms → cellular organisms → Bacteria	4055	Open in IMG/M
3300027552\|Ga0209982_1008081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1541	Open in IMG/M
3300027617\|Ga0210002_1006407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1776	Open in IMG/M
3300027665\|Ga0209983_1149107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	536	Open in IMG/M
3300027880\|Ga0209481_10240833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	910	Open in IMG/M
3300027886\|Ga0209486_10001856	All Organisms → cellular organisms → Bacteria	9076	Open in IMG/M
3300027886\|Ga0209486_10022934	All Organisms → cellular organisms → Bacteria → Proteobacteria	2937	Open in IMG/M
3300027886\|Ga0209486_10345313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	889	Open in IMG/M
3300027909\|Ga0209382_10286585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1860	Open in IMG/M
3300027909\|Ga0209382_10316584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1756	Open in IMG/M
3300030606\|Ga0299906_10116394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2124	Open in IMG/M
3300030620\|Ga0302046_10632567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	870	Open in IMG/M
3300031562\|Ga0310886_10779678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	600	Open in IMG/M
3300031854\|Ga0310904_10272218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1059	Open in IMG/M
3300031913\|Ga0310891_10011565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2049	Open in IMG/M
3300031940\|Ga0310901_10206844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	785	Open in IMG/M
3300032000\|Ga0310903_10294321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	796	Open in IMG/M
3300032122\|Ga0310895_10013846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2464	Open in IMG/M
3300032122\|Ga0310895_10143354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1024	Open in IMG/M
3300032179\|Ga0310889_10620082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	559	Open in IMG/M
3300032179\|Ga0310889_10678100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	537	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.21%
Host-Associated	Host-Associated	46.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.46%
Plants	Host-Associated → Plants	46.79%
Aquatic	Environmental → Aquatic	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.18%
Sediment	Environmental → Aquatic → Sediment	1.83%
Marine	Environmental → Aquatic → Marine	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.26%
Loam	Environmental → Terrestrial → Soil → Loam	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.92%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	20.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	11.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026782	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A2-12 (SPAdes)	Environmental	Open in IMG/M
3300026803	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A1-12 (SPAdes)	Environmental	Open in IMG/M
3300026976	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A4-11 (SPAdes)	Environmental	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027397	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3-11 (SPAdes)	Environmental	Open in IMG/M
3300027400	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A4-11 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_06493272	2228664021	Soil	ALRAKRRRQSADCSSSSGPGSARMLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
JGI10215J12807_11028591	3300000881	Soil	VLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQSIGVNTTPGREWRNALFGADMYIQRYLNELRDSEKSVESDTTEWL*
JGI10220J13317_105407932	3300001139	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQSIGVNTTPGREWRNALFGADMYIQRYLNELRDSEKSVESDTTEWL*
F14TB_1020080871	3300001431	Soil	MLKEEMAKAQIAAVLQAYAHDINRIIALVPQGGATREAQSKLGQLKNAIHSDYKHRHAIARSAQLTPLEQANLEHTIRDVFFALQAIGVNTDPGREWRNALYGADMDIQRYVAELRGPSVEADGEDSDD*
Ga0055465_100549212	3300004013	Natural And Restored Wetlands	MLTEGMAKAQIASVLRGYAHDINRISALMPHGGTAKDAQSRLKQLKDAIHSDYKHRYAIARSTQLTPLEQVNLAHAIRDLFFNLQAIGVNTTPGREWRNALYGADLCIQRYLTELRGPEESVEPDNTEWL*
Ga0062593_1019285052	3300004114	Soil	IVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQSIGVNTTPGREWRNALFGADMYIQRYLNELRDSEKSVESDTTEWL
Ga0063356_1007368391	3300004463	Arabidopsis Thaliana Rhizosphere	MLKEGMAKAEIVAVLRRYAYDINQISALMPDSGTARDAQSRLKQLKDAIHSDYKHRHVIARTAQLTPLEQSNLARAILDVFFALQAIGVNTTPGREWRNALYGADMYIQHCLTEFRDSEKDVESDITEWL*
Ga0063356_1011289851	3300004463	Arabidopsis Thaliana Rhizosphere	GYAHDINRISALMPHGGTAKDAQSRLKQLKDALHSDYKHRYAIARSTQLSPLEQANLARAIRDVFSTLQVIGVNTTPGREWRDALYGADLCIRRYLTELRDPEESVEPDTTEWL*
Ga0063356_1044037312	3300004463	Arabidopsis Thaliana Rhizosphere	LSALRAKRRRQSADCSSSSGPGSARMLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQSIGVNTTPGREWRNALFGADMYIQRYLNELRDSEKSVESDTTEWL*
Ga0065704_104400531	3300005289	Switchgrass Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0065704_108402141	3300005289	Switchgrass Rhizosphere	RMLKEGMAKAHIVTVLQRYAHDIKRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0065707_108752851	3300005295	Switchgrass Rhizosphere	MLKEGMAKAEIVTVLQRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKQRHAIARTAQLTPLEQSNLARAIPDVFFALQAIGVNTNPGREWRNALYGADMYIQRYLTELREPETSVESDTTEWL*
Ga0070676_110356322	3300005328	Miscanthus Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0070670_1019418311	3300005331	Switchgrass Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPIEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0070677_102296431	3300005333	Miscanthus Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0070674_1000211324	3300005356	Miscanthus Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0070672_1002953252	3300005543	Miscanthus Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSRTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0070696_1005252532	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	TRHIGRVLRPPPSRLGSARMLKEGMAKAHIVTVLQRYAHDINRISALIPQGGGTTAQRAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0070704_1004171683	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0068857_1005817052	3300005577	Corn Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0068861_1001020501	3300005719	Switchgrass Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHTDYKHRHAIARTAQLTPIEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEW
Ga0068861_1011227442	3300005719	Switchgrass Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEW
Ga0068870_100773292	3300005840	Miscanthus Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHTDYKHRHAIARTAQLTPIEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0075422_100627302	3300006196	Populus Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIVRSSQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0075428_1002624592	3300006844	Populus Rhizosphere	MLKEGMTKAQIVAVLRGYAYDINRISALMPHAGTVKDAQSRLKDLKDAIHSDYKHRHAIARSAQLTPLEQANLARAIGDMFSALQTIGVNTNPGREWRNALYGADMCLQRYLTELRGLDKSVESDTTEWL*
Ga0075428_1004860072	3300006844	Populus Rhizosphere	MLTEGMAKAQIASVLRGYAHDINRISALMPHGGAAKDAQSRLKLLKDAIHSDYKHRYAIARSTQLTPLEQANLARAIRDVFFNLQAIGVNTTPGREWRNALYGADLCIQRYLTELRGPEESVEFDNTEWL*
Ga0075421_1001646662	3300006845	Populus Rhizosphere	MLTEGMAKNQIVTVLRRYAYDINRISALMPDGGTAKEAQSRLKQLKDAIHSDYKQRHAIARTAQLTPLEQSNLARAILDVFSTLQAIGVNTTPGREWRNALYGAEMYIQRYLTEFRDPETSVESDITEWL*
Ga0075421_1001950163	3300006845	Populus Rhizosphere	MLKEGMTKAQIVAVLRGYAYDINRISALMPHAGTVKDAQSRLKDLKDAIHSDYKHRHAIARSAQLTPLEQANLARAIGDMFSALQTIGVNTNPGREWRNALYGADMCLQRYLTELRGFDKSVESDTTEWL*
Ga0075421_1009477013	3300006845	Populus Rhizosphere	MLKEGMAKAELVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0075430_1013738372	3300006846	Populus Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0079217_104317562	3300006876	Agricultural Soil	MLKEGMAKAEIVTVLQRYAYDINRISALMSDSGTAKDAQSRLKQLKDAIHSDYKQRHAIARTAQLTPLEQSNLARAILNVFSALQAIGVNTTPGREWRNTLYGAEMYIQRYLTEFRDPEASVESDITEWL*
Ga0075429_1009529041	3300006880	Populus Rhizosphere	GSARMLKEGMAKAHIVTVLQRYAHDINRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0079215_101894692	3300006894	Agricultural Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLIPLEQSNLASAILDVFSALQAIGVNTTPGREWRNALYGADMYIQRYLNELRDPEKSVESDTTEWL*
Ga0079215_103717082	3300006894	Agricultural Soil	MLKEGMTKAQIVAVLRGYAYDINRISALMPHAGTVKDAQSRLKDLKDAIHSDYKHRHAIARSAQLMPLEQANLARAIGDMFSALQTIGVNTNPGREWRNALYGADMCLQRYLTELRGLDKSVESDTTEWL*
Ga0079216_116989401	3300006918	Agricultural Soil	GMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQAIGVNTTPGREWRNALYGADMYIQRYLNELRDPEKSVESDTTEWL*
Ga0075419_109751321	3300006969	Populus Rhizosphere	TLSALRAKPRRQSADCSSSSGPGSARMLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0079218_100339482	3300007004	Agricultural Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKQRHAIARTAQLTPLEQSNLARAILNVFSALQAIGVNTTPGREWRNTLYGAEMYIQRYLTEFRDPEASVESDITEWL*
Ga0079218_101884542	3300007004	Agricultural Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQAIGVNTTPGREWRNALYGADMYIQRYLNELRDPEKSVESDTTEWL*
Ga0111539_100218402	3300009094	Populus Rhizosphere	MLKEGMAKAHIVTVLQRYAHDINRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0111539_101096112	3300009094	Populus Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTWIQRYLTELREPETSIESDITEWL*
Ga0111539_102159022	3300009094	Populus Rhizosphere	MLTEGMAKAQIASVLRGYAHDINRISALMPHGGAAKDAQSRLKLLKDAIHSDYKHRYAIARSTQLTPLEQANLARAIRDVFFNLQAIGVNTTPGKEWRNALYGADLCIQRYLTELRGPEESVESDNTVWL*
Ga0114129_111705722	3300009147	Populus Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELHEPETSIESDITEWL*
Ga0114129_117800071	3300009147	Populus Rhizosphere	GRGQSRISRHCLVVSTSESAGSASRLGRTHMLTEGMAKAQIASVLRGYAHDINRISALMPHGGAAKDAQSRLKLLKDAIHSDYKHRYAIARSTQLTPLEQANLARAIRDVFFNLQAIGVNTTPGREWRNALYGADLCIQRYLTELRGPEESVEFDNTEWL*
Ga0105242_103694461	3300009176	Miscanthus Rhizosphere	MLKEGMAKAHIVTVLQRYAHDIKRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0105340_11615781	3300009610	Soil	MLKEGMPKARIVAVLQGYAYDINRIFALIPQGSGGAKEAQSRLKQVKDAIHSDYKHRHAIAQSTQLTPLEQANLTRAIRDVFFALQAIGVNTIPDTEWRNALFGADTEIQRYLAELRGPEKKRVESVDWF*
Ga0157291_100823841	3300012902	Soil	MLKEGMAKAHIVTVLQRYAHDIKRISALVPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0157282_100514652	3300012904	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHTDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQR
Ga0157296_101499991	3300012905	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0157283_101970391	3300012907	Soil	VTVLQRYAHDIKRISAVIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0157308_100364474	3300012910	Soil	ISALMPDSGTARDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0157306_100018333	3300012912	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAREAQSKLKQLKDAIHTDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0157310_100902491	3300012916	Soil	KEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0157375_109761482	3300013308	Miscanthus Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHTDYKHRHAIARTAQLTPIEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0173480_100178593	3300015200	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL*
Ga0173480_101160671	3300015200	Soil	IGRVLRPPPSRLGSARMLKEGMAKAHIVTVLQRYAHDINRISALIPQGGGTTAQKAQSRLKQLKDAIHSAYKHGHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0173478_100179354	3300015201	Soil	TITRRIGRVLRPLPSRLGSARMLKEGMAKAHIVTVLQRYAHDIKRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD*
Ga0163161_111835011	3300017792	Switchgrass Rhizosphere	SALMPDSGTARDAQSKLKQLKDAIHTDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0184627_100999654	3300018079	Groundwater Sediment	LLGSAGMLKEGMPKARIVAVLQGYAYDINRIFALIPQGSGGAKEAQSRLKQLKNAIHSDYKHRHAIAQSTQPTPLEQANLTRAIRDVFFALQAIGVNTIPGTEWRNALFGADTEIQRYLAELRGPEKKRVESVDWF
Ga0190272_101170642	3300018429	Soil	MLEEGMPKARIVAVLQGYAYDINRIFALIPQGSGAKEAQSRLKQVKNAIHSDYKHRHAIAQSTQLTPLEQANLTRTIRDVFFALQAIGVNTIPGTEWRNALFGADTEIERYLAELRGPEKKPLESVDLF
Ga0190270_101566193	3300018469	Soil	MLKEGMAKAEIVTVLRRYGYDINQISALMPDSGTARDAQSRLKQLKDAIHSDYKHRHAIARTAQLTPLEQSNLARAILDVFFALQAIGVNTTPGREWRNALYGADMYIQHCLTEFRDREKSVESDITEWL
Ga0190270_110335391	3300018469	Soil	MLKEGMTKAQIVAVLRGYVYDINRISALMPHAGTVKDAQSRLKDLKDAIHSDYKHRHAIARSAQLMPLEQANLARAIGDMFSALQTIGVNTNPGREWRNALYGADM
Ga0173481_103136552	3300019356	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKNAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0247797_10052051	3300023057	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0247793_10153253	3300023066	Soil	EPAGSARMLKEGMAKAHIVTVLQRYAHDIKRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0247793_10341862	3300023066	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0247799_10516711	3300023072	Soil	LSALRAKRRRQSADCSSSSGPGSARMLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQSIGVNTTPGREWRNALFGADMYIQRYLNELRDSEKSVESDTTEWL
Ga0247796_10272202	3300023261	Soil	PAGSARMLKEGMAKAHIVTVLQRYAHDIKRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0247800_11218352	3300023263	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAREAQSKLKQLKDAIHTDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0247789_10234081	3300023266	Soil	RPPPSRLGSARMLKEGMAKAHIVTVLQRYAHDINRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0207682_100734742	3300025893	Miscanthus Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0207645_101204694	3300025907	Miscanthus Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0207643_102016442	3300025908	Miscanthus Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHTDYKHRHAIARTAQLTPIEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0207660_114367021	3300025917	Corn Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITE
Ga0207686_104069551	3300025934	Miscanthus Rhizosphere	RMLKEGMAKAHIVTVLQRYAHDIKRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0207691_100369895	3300025940	Miscanthus Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSRTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0207668_100533323	3300025972	Switchgrass Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0207675_1017169322	3300026118	Switchgrass Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHTDYKHRHAIARTAQLTPIEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTE
Ga0207595_1005532	3300026782	Soil	MIKEGMEKAQIAAVLQGYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0207549_1083501	3300026803	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQSIGVNTTPGREWRNALFGADMYIQRYLNELR
Ga0207525_1028362	3300026976	Soil	PPTAEPAGSARMLKEGMAKAHIVTVLQRYAHDIKRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0209967_10243821	3300027364	Arabidopsis Thaliana Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0209967_10705002	3300027364	Arabidopsis Thaliana Rhizosphere	LKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0209981_10546801	3300027378	Arabidopsis Thaliana Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAREAQSKLKQLKDAIHTDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0209996_10126561	3300027395	Arabidopsis Thaliana Rhizosphere	ADCSSSSGPGSARMLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0207463_1015371	3300027397	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQSIGVNTTPGREWRNALFGADMYIQRYLNELRDSEKSVESDTTEWL
Ga0207560_1034641	3300027400	Soil	RISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0209968_10054424	3300027526	Arabidopsis Thaliana Rhizosphere	MAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0209999_10603782	3300027543	Arabidopsis Thaliana Rhizosphere	INRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0209982_10008132	3300027552	Arabidopsis Thaliana Rhizosphere	MLKEGMAKAEIVTVLRRYAYDTNRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0209982_10080811	3300027552	Arabidopsis Thaliana Rhizosphere	DCSSSSGPGSARMLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQSIGVNTTPGREWRNALFGADMYIQRYLNELRDSEKSVESDTTEWL
Ga0210002_10064072	3300027617	Arabidopsis Thaliana Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0209983_11491071	3300027665	Arabidopsis Thaliana Rhizosphere	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHTDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0209481_102408331	3300027880	Populus Rhizosphere	MLKEGMTKAQIVAVLRGYAYDINRISALMPHAGTVKDAQSRLKDLKDAIHSDYKHRHAIARSAQLTPLEQANLARAIGDMFSALQTIGVNTNPGREWRNALYGADMCLQRYLTELRGLDKSVESDTTEWL
Ga0209486_100018565	3300027886	Agricultural Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKQRHAIARTAQLTPLEQSNLARAILEVFSALQAIGVNTTPGREWRNTLYGAEMYIQRYLTEFRDPEASVESDITEWL
Ga0209486_100229343	3300027886	Agricultural Soil	MLKEGMTKAQIVAVLRGYAYDINRISALMPHAGTVKDAQSRLKDLKDAIHSDYKHRHAIARSAQLMPLEQANLARAIGDMFSALQTIGVNTNPGREWRNALYGADMCLQRYLTELRGLDKSVESDTTEWL
Ga0209486_103453131	3300027886	Agricultural Soil	RYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQAIGVNTTPGREWRNALYGADMYIQRYLNELRDPEKSVESDTTEWL
Ga0209382_102865853	3300027909	Populus Rhizosphere	MLTEGMAKAQIASVLRGYAHDINRISALMPHGGAAKDAQSRLKLLKDAIHSDYKHRYAIARSTQLTPLEQANLARAIRDVFFNLQAIGVNTTPGREWRNALYGADLCIQRYLTELRGPEESVEFDNTEWL
Ga0209382_103165842	3300027909	Populus Rhizosphere	MLTEGMAKNQIVTVLRRYAYDINRISALMPDGGTAKEAQSRLKQLKDAIHSDYKQRHAIARTAQLTPLEQSNLARAILDVFSTLQAIGVNTTPGREWRNALYGAEMYIQRYLTEFRDPETSVESDITEWL
Ga0299906_101163941	3300030606	Soil	MLKEGMPKARIVAVLQGYAYDINRIFALIPQGSGGTKEAQSRLTQVKNAIHSDYKHRHAIVQSTQLTPLEQANLTRTIRDVFFALQAIGVNTIPGTEWRNALFGADTEIERYLAELRGPEKKRLESVDWI
Ga0302046_106325671	3300030620	Soil	MLKEGMPKGRIVAVLQGYAYDINRIFALIPQGSGGAKEAQSRLKQVKNAIHSDYKHRHAIAQSAQLTPLEQANLTRAIRDVFFALQAIGVNTIPGTEWRNALFGADTEIERYLAELRGPEKKRLESVDLF
Ga0310886_107796781	3300031562	Soil	LKEGMAKAEIVTVLRRYAYDINRISALMPDSGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0310904_102722182	3300031854	Soil	MLKEGMAKAEIVTVLRRYAYDINRIAALMPDSRTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0310891_100115654	3300031913	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDSRTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0310901_102068441	3300031940	Soil	IVTVLRRYAYDINRISALMPDRGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0310903_102943212	3300032000	Soil	MAKAEIVTVLRRYAYDINRISALMPDSGTARDAQSKLKQLKDAIHTDYKHRHAIARTAQLTPIEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0310895_100138465	3300032122	Soil	LQRYAHDIKRISALIPQGGGTTAQKAQSRLKQLKDAIHSDYKHRHAIVRSTQLTPLEQANLARTIRDVFFALQAIGVNTNPGREWRNALYGADMEIQRYVAELRGPSVEADGEDSDD
Ga0310895_101433542	3300032122	Soil	MLKEGMAKAEIVTVLRRYAYDINRISALMPDRGTAKDAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLADAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0310889_106200822	3300032179	Soil	VTVLRRYAYDINRISALMPDRGTAKNAQSKLKQLKDAIHSDYKHRHAIARTAQLTPLEQLNLAHAILDVFFALQTIGVNTNPGREWRNALYGADTYIQRYLTELREPETSIESDITEWL
Ga0310889_106781001	3300032179	Soil	GSARMLKEGMAKAEIVTVLRRYAYDINRISALMPDGGTAKDAQSRLKQLKDAIHSDYKHRNAITRSAQLTPLEQSNLASAILDVFSALQSIGVNTTPGRKWRNALFGADMYIQRYLNELRDSEKSVESDTTEWL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089138

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences