NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F089090

Metagenome Family F089090

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F089090
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 127 residues
Representative Sequence MTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARVVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDND
Number of Associated Samples 74
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 65.14 %
% of genes near scaffold ends (potentially truncated) 35.78 %
% of genes from short scaffolds (< 2000 bps) 85.32 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (60.550 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere
(20.183 % of family members)
Environment Ontology (ENVO) Unclassified
(71.560 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(82.569 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.03%    β-sheet: 12.60%    Coil/Unstructured: 39.37%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF01261AP_endonuc_2 29.36
PF13193AMP-binding_C 18.35
PF02834LigT_PEase 4.59
PF00596Aldolase_II 3.67
PF17042NBD_C 2.75
PF14542Acetyltransf_CG 1.83
PF00005ABC_tran 1.83
PF04397LytTR 0.92
PF02653BPD_transp_2 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG1514RNA 2',3'-cyclic phosphodiesterase (2'-5' RNA ligase)Translation, ribosomal structure and biogenesis [J] 4.59

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms60.55 %
UnclassifiedrootN/A39.45 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_117851079Not Available510Open in IMG/M
3300004479|Ga0062595_101844515Not Available576Open in IMG/M
3300005327|Ga0070658_10115830All Organisms → cellular organisms → Bacteria2223Open in IMG/M
3300005327|Ga0070658_10216380All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1619Open in IMG/M
3300005328|Ga0070676_10042231All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2647Open in IMG/M
3300005328|Ga0070676_10571309Not Available812Open in IMG/M
3300005331|Ga0070670_100025286All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5109Open in IMG/M
3300005331|Ga0070670_100052768All Organisms → cellular organisms → Bacteria → Proteobacteria3491Open in IMG/M
3300005331|Ga0070670_100399364Not Available1213Open in IMG/M
3300005333|Ga0070677_10081480All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1386Open in IMG/M
3300005333|Ga0070677_10134485All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1133Open in IMG/M
3300005334|Ga0068869_100613857All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300005336|Ga0070680_101792143All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300005337|Ga0070682_100660912Not Available833Open in IMG/M
3300005338|Ga0068868_100497775Not Available1067Open in IMG/M
3300005338|Ga0068868_101458813All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia → unclassified Delftia → Delftia sp. 670639Open in IMG/M
3300005339|Ga0070660_100643461All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales888Open in IMG/M
3300005339|Ga0070660_101348375Not Available606Open in IMG/M
3300005344|Ga0070661_100292659Not Available1266Open in IMG/M
3300005344|Ga0070661_100697818All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300005345|Ga0070692_10899796All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia → unclassified Delftia → Delftia sp. 670612Open in IMG/M
3300005347|Ga0070668_100818858All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300005354|Ga0070675_100180364All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1825Open in IMG/M
3300005364|Ga0070673_100376145All Organisms → cellular organisms → Bacteria → Proteobacteria1266Open in IMG/M
3300005366|Ga0070659_100989570All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia738Open in IMG/M
3300005366|Ga0070659_101012401All Organisms → cellular organisms → Bacteria → Proteobacteria730Open in IMG/M
3300005367|Ga0070667_100536252Not Available1075Open in IMG/M
3300005439|Ga0070711_100612258Not Available910Open in IMG/M
3300005441|Ga0070700_101245798Not Available623Open in IMG/M
3300005455|Ga0070663_101332367Not Available634Open in IMG/M
3300005456|Ga0070678_100195040All Organisms → cellular organisms → Bacteria → Proteobacteria1668Open in IMG/M
3300005456|Ga0070678_101715293Not Available591Open in IMG/M
3300005457|Ga0070662_100480048Not Available1035Open in IMG/M
3300005530|Ga0070679_101069525All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia → unclassified Delftia → Delftia sp. 670751Open in IMG/M
3300005543|Ga0070672_100181623All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1753Open in IMG/M
3300005547|Ga0070693_100230204All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1219Open in IMG/M
3300005616|Ga0068852_100225943All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1782Open in IMG/M
3300005616|Ga0068852_100471869All Organisms → cellular organisms → Bacteria → Proteobacteria1245Open in IMG/M
3300005616|Ga0068852_100931046All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus taiwanensis887Open in IMG/M
3300005618|Ga0068864_100232679All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1705Open in IMG/M
3300005840|Ga0068870_10458184Not Available842Open in IMG/M
3300006031|Ga0066651_10581359Not Available595Open in IMG/M
3300006046|Ga0066652_101105931All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia → unclassified Delftia → Delftia sp. 670751Open in IMG/M
3300006237|Ga0097621_100106432All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2366Open in IMG/M
3300006358|Ga0068871_101693443Not Available600Open in IMG/M
3300009156|Ga0111538_13886489Not Available517Open in IMG/M
3300009177|Ga0105248_11232188Not Available846Open in IMG/M
3300010036|Ga0126305_10932580Not Available594Open in IMG/M
3300012212|Ga0150985_118740133Not Available543Open in IMG/M
3300013102|Ga0157371_10959680Not Available651Open in IMG/M
3300013104|Ga0157370_10309898All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1457Open in IMG/M
3300013105|Ga0157369_10860443Not Available930Open in IMG/M
3300013296|Ga0157374_10025027All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales5355Open in IMG/M
3300013307|Ga0157372_10361124All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1692Open in IMG/M
3300014166|Ga0134079_10201512All Organisms → cellular organisms → Bacteria → Proteobacteria835Open in IMG/M
3300014325|Ga0163163_12132281Not Available620Open in IMG/M
3300014745|Ga0157377_10050431All Organisms → cellular organisms → Bacteria → Proteobacteria2344Open in IMG/M
3300014968|Ga0157379_10944860Not Available820Open in IMG/M
3300014968|Ga0157379_12337368Not Available533Open in IMG/M
3300015371|Ga0132258_10644538All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2664Open in IMG/M
3300024055|Ga0247794_10049351All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1150Open in IMG/M
3300025321|Ga0207656_10050231All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1800Open in IMG/M
3300025321|Ga0207656_10051639All Organisms → cellular organisms → Bacteria → Proteobacteria1778Open in IMG/M
3300025321|Ga0207656_10053880All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1747Open in IMG/M
3300025321|Ga0207656_10153622Not Available1091Open in IMG/M
3300025893|Ga0207682_10179935All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300025901|Ga0207688_10052553All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2283Open in IMG/M
3300025908|Ga0207643_10540227Not Available747Open in IMG/M
3300025909|Ga0207705_11485053Not Available513Open in IMG/M
3300025919|Ga0207657_10488487All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales965Open in IMG/M
3300025920|Ga0207649_10385494All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1045Open in IMG/M
3300025920|Ga0207649_10717168Not Available776Open in IMG/M
3300025925|Ga0207650_10126229All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1997Open in IMG/M
3300025925|Ga0207650_10370598All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300025925|Ga0207650_11079903Not Available683Open in IMG/M
3300025931|Ga0207644_10953534Not Available719Open in IMG/M
3300025931|Ga0207644_11744630Not Available521Open in IMG/M
3300025932|Ga0207690_10144731All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1756Open in IMG/M
3300025932|Ga0207690_10456545All Organisms → cellular organisms → Bacteria → Proteobacteria1028Open in IMG/M
3300025933|Ga0207706_10222983All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1650Open in IMG/M
3300025933|Ga0207706_10585356Not Available959Open in IMG/M
3300025933|Ga0207706_10787474All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales808Open in IMG/M
3300025937|Ga0207669_10583913Not Available906Open in IMG/M
3300025942|Ga0207689_11049671All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia → unclassified Delftia → Delftia sp. 670687Open in IMG/M
3300025945|Ga0207679_10384325All Organisms → cellular organisms → Bacteria → Proteobacteria1231Open in IMG/M
3300025945|Ga0207679_10698710All Organisms → cellular organisms → Bacteria → Proteobacteria920Open in IMG/M
3300025972|Ga0207668_12137385All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium504Open in IMG/M
3300025981|Ga0207640_10074897All Organisms → cellular organisms → Bacteria → Proteobacteria2292Open in IMG/M
3300026023|Ga0207677_11169329All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Delftia → unclassified Delftia → Delftia sp. 670703Open in IMG/M
3300026023|Ga0207677_11395373Not Available645Open in IMG/M
3300026067|Ga0207678_10295326All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1392Open in IMG/M
3300026075|Ga0207708_11384724Not Available617Open in IMG/M
3300026078|Ga0207702_10674935All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1017Open in IMG/M
3300026088|Ga0207641_10293337All Organisms → cellular organisms → Bacteria → Proteobacteria1534Open in IMG/M
3300026121|Ga0207683_10006338All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales10133Open in IMG/M
3300026142|Ga0207698_10865927All Organisms → cellular organisms → Bacteria → Proteobacteria909Open in IMG/M
3300026142|Ga0207698_11199178Not Available773Open in IMG/M
3300031939|Ga0308174_10008026All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5914Open in IMG/M
3300031939|Ga0308174_10050599All Organisms → cellular organisms → Bacteria → Proteobacteria2804Open in IMG/M
3300031939|Ga0308174_10273604Not Available1321Open in IMG/M
3300031939|Ga0308174_10944402Not Available730Open in IMG/M
3300031939|Ga0308174_11109791Not Available673Open in IMG/M
3300031996|Ga0308176_11205261All Organisms → cellular organisms → Bacteria → Proteobacteria803Open in IMG/M
3300032074|Ga0308173_10041256All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3298Open in IMG/M
3300032074|Ga0308173_10057005All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2874Open in IMG/M
3300032074|Ga0308173_10078593All Organisms → cellular organisms → Bacteria → Proteobacteria2502Open in IMG/M
3300032074|Ga0308173_10296539All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1388Open in IMG/M
3300032074|Ga0308173_10493549Not Available1095Open in IMG/M
3300032074|Ga0308173_10761367Not Available889Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere20.18%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil11.01%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere11.01%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere10.09%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere7.34%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere7.34%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.67%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.83%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.83%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.92%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.92%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_11785107913300002568SoilMDPFVVAAFKQRAAAEDAVERVRSSGLATREIRVETAPDVINAATIEADEMATGGFFGNAARLLNELFDHRADERLAVDYDDLAHKEARVVTVVLDSRDSANEVQALLTAAGAERVSVLPQAGLDTD*
Ga0062595_10184451513300004479SoilMSPFVVAAFKQRAAAEDAVERLRSSGLATREVRVETAPDVINAASIEADEMATGGFFGNAARLLNDLFDHRADERLAVDYDDLAHKEARVVTVVLDSRDEANQVEALLTAAGAERVSVLPQAGLDSD*
Ga0070658_1011583033300005327Corn RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLKSSDSSQEVVDLLTAAGADRVSALPQPGLDND*
Ga0070658_1021638023300005327Corn RhizosphereMTPFVVAAFKDRLAADAAVERLRAGGPPAREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHPPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD*
Ga0070676_1004223123300005328Miscanthus RhizosphereMTPFVVAAFKDPAAADAAVERLRGSGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG*
Ga0070676_1057130913300005328Miscanthus RhizosphereMTPFVVAAFKDPAAADAAVERLRTSGPSAREIRVDSAPDVLNAGAIEVDEMATGGFFGNAVRLLDELLGYRPDDEHAVDYDDMARKEARVVTVVLESGDSAQEVVDVLTAAGADRVSALPQPGLDND*
Ga0070670_10002528643300005331Switchgrass RhizosphereMTPFVVAAFNDRAAADAAVERLRTSGPPAREIRVESAPDVINAATIEVDEMASGGFFGNAARLLNELFDHPTDERYAVDYDDLVHKEARVVTVVLNSSGSAKEVADLLRAAGARRVSALPQPGLDAD*
Ga0070670_10005276843300005331Switchgrass RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDND*
Ga0070670_10039936413300005331Switchgrass RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG*
Ga0070677_1008148023300005333Miscanthus RhizosphereMTPFVVSAFNDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSTDAAQEVADLLAAAGADRVSALPQPGLDNG*
Ga0070677_1013448523300005333Miscanthus RhizosphereMTPFVVAAFKDPAAADAAVERLRTSGPSAREIRVDSAPDVLNAGAIEVDEMATGGFFGNAVRLLDELLGYRPDDQHAVDYDDMARKEARVVTVVLESGDSAQEVVDVLTAAGADRVSALPQPGLDND*
Ga0068869_10061385723300005334Miscanthus RhizosphereMTPFVVAAFKDRLAADAAVERLRAGGPPAREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGYRPDERHAVDYDDMVRKEARVVTVVLESGDSAQEVVDLLTAAGADRVSALPQPGLDND*
Ga0070680_10179214313300005336Corn RhizosphereGPPTREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHPPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD*
Ga0070682_10066091223300005337Corn RhizosphereMTPFVVAAFKDRVAADAAVERLRASGPPTREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHPPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD*
Ga0068868_10049777523300005338Miscanthus RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSEEVVDLLTAAGADRVSALPQPGLDND*
Ga0068868_10145881323300005338Miscanthus RhizosphereFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG*
Ga0070660_10064346123300005339Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDNRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG*
Ga0070660_10134837513300005339Corn RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLTAA
Ga0070661_10029265923300005344Corn RhizosphereMTPFVVAAFKDPVAADAAVERLRTSGAPMREVRVDTAPDVQNAAAIEVDEMATGGFFGNAARLLDELLGYRPDDRHAVDYDDMVHKQARVVTVVLDSKDSAQEVVELLTAAGADRVSALPQPGLDSD*
Ga0070661_10069781823300005344Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDERHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG*
Ga0070692_1089979623300005345Corn, Switchgrass And Miscanthus RhizosphereAADAAVERLRTSGAPMREVRVDTAPDVQNAAAIEVDEMATGGFFGNAARLLDELFDYRPDDRHAVDYDDMVHKQARVVTVVLDSKDSAREVVDLLTAAGADRVSALPQPGLDND*
Ga0070668_10081885813300005347Switchgrass RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSA
Ga0070675_10018036423300005354Miscanthus RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDERHAVDYDDLAHKEARVVTVVLDSTDAAQEVADLLAAAGADRVSALPQPGLDNG*
Ga0070673_10037614513300005364Switchgrass RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSKDSAQEVVELLTAAGADRVSALPQPGLD
Ga0070659_10098957013300005366Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRTSGPSAREIRVDSAPDVLNAGAIEVDEMATGGFFGNAVRLLDELLGYRPDDQHAVDYDDMARKEARVVTVVLESGDSAQEVVDVLTAAGADRVSALPQPGLDN
Ga0070659_10101240123300005366Corn RhizosphereMTPFVVAAFKDRLAADAAVERLRTGGPPAREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHPPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD*
Ga0070667_10053625213300005367Switchgrass RhizosphereMTPFVVAAFKDRAAADAAVERLRASGPSAREIRVDSAPDVLNAGTIEVDEMATGGFFGNAARLLDELLGYRPDERHAVDYDDMVRKEARVVTVVLESGDSAQEVVDLLTAAGADRVSALPQPGLDND*
Ga0070711_10061225813300005439Corn, Switchgrass And Miscanthus RhizosphereRAAAEDAVERLRSSGIATREIRVETAPDVINAATIEADEMATGGFFGNAARLLNELFDHRADERLAVDYDDLAHKEARVVTVVLDSRDAANQVEALLTAAGAERVSVLPQAGLDGD*
Ga0070700_10124579823300005441Corn, Switchgrass And Miscanthus RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARVVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDND*
Ga0070663_10133236723300005455Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQDVADLLAA
Ga0070678_10019504023300005456Miscanthus RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLSAAGADRVSALPQPGLDND*
Ga0070678_10171529313300005456Miscanthus RhizosphereMTPFVVAAFNDRAAADAAVERLRTSGPPAREIRVESAPDVINAATIEVDEMASGGFFGNAARLLNELFDHPTDERYAVDYDDLVHKEARVVTVVLNSSDSAKEVADLLTAAGARRVSALPQPGLDAD*
Ga0070662_10048004823300005457Corn RhizospherePAERTPALFPETAMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDERQAVDYDDLAHKEARVVTVVLDSTDAAQEVADLLAAAGADRVSALPQPGLDNG*
Ga0070679_10106952523300005530Corn RhizosphereMTPFVVAAFKDPVAADAAVERLRTSGAPMREVRVDTAPDVQNAAAIEVDEMATGGFFGNAARLLDELLGHPPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD*
Ga0070672_10018162323300005543Miscanthus RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDERQAVDYDDLAHKEARVVTVVLDSTDAAQEVADLLAAAGADRVSALPQPGLDNG*
Ga0070693_10023020423300005547Corn, Switchgrass And Miscanthus RhizosphereMTPFVVAAFKDRVAADAAVERLRASGPPTREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHRPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD*
Ga0068852_10022594323300005616Corn RhizosphereMTPFVVAAFKDRVAADAAVERLRASGPPTREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHRPDDRHAVDYDDMVRKEARVVTVVLGPGESAKDVVDMLTAAGADRVSALPQPGLDDD*
Ga0068852_10047186923300005616Corn RhizosphereMTPFVVAAFKDLAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSTDAAQEVADLLAAAGADRVSALPQPGLDNG*
Ga0068852_10093104623300005616Corn RhizosphereMTPFVVAAFRDSSAADAAVERLRTSGPSAREIRVHTAPDVMNAASIEVDEIATGGFFGNAARLLVDLLGSPPDDRHALDYNDMAHKEARVVTVVLDSTDAAQQVAELLTTAGAERVSALPQPGLDNG*
Ga0068864_10023267913300005618Switchgrass RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVMLESSDSSQEVVDLLSAAGADRVSALPQPGLDND*
Ga0068870_1045818413300005840Miscanthus RhizospherePMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDND*
Ga0066651_1058135923300006031SoilMDPFVVAAFKQRAAAEDAVERVRSSGIATREIRVDTAPDVINAATIEADEMATGGFFGNAARLLNDLFDHRTDERLAVDYDDLAHREARVVTVVLDSRDSARQVEALLTAAGAERVSVLPQAGLVDD*
Ga0066652_10110593123300006046SoilMSPFVVAAFKQRAAAEDAVERLRSSGLATREVRVETAPDVINAATIEADEMATGGFFGNAARLLNELFDHRADERLAVDYDDLAHKEVRVVTVVLDSRDVARQVEALLTAAGAERVSVLPQAGLDSD*
Ga0097621_10010643243300006237Miscanthus RhizosphereVVPALEPPIRTRWVATGDRRGGDGRARVMPVIGRLNVPVGVPMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDND*
Ga0068871_10169344323300006358Miscanthus RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLSAAGADRVSTLPQPGLGND*
Ga0111538_1388648913300009156Populus RhizosphereMTPFVVAAFKDRAVADAAVERLRTSGPPTREIRVDTAPDVLNAGAIEVDEMATGGFFGNAVRLLDELLGYRPDDQHAVDYDDMARKEARVVTVVLESGDSAQEVVDVLTAAGADRVSALPQPGLDND*
Ga0105248_1123218813300009177Switchgrass RhizosphereDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSEEVVDLLTAAGADRVSALPQPGLDND*
Ga0126305_1093258023300010036Serpentine SoilMTPFVVAAFKDPAAADAAVERLRTSGPPTREIRVDTAPDVLNAATIEVDEMASGGFFGNAARLLNDLFDYPADDRQAVDYNDMARKEARVVTVVLDSGDSASEVADLLTAA
Ga0150985_11874013313300012212Avena Fatua RhizosphereMTPFVVAAFRDSSVADAAIERLRTAGPSTREIRVQTAPDVLNANTIEADEIATGGFFGNAARLLVDLFGTPPDDRHALDYNDMAHKEARVVTVVLDSTDAAQQVAELLTAAGADRVSALPQPGLDNG*
Ga0157371_1095968023300013102Corn RhizosphereVAADAAVERLRTSGAPMREVRVDTAPDVQNAAAIEVDEMATGGFFGNAARLLDELLGHRPDDRHAVDYDDMVHKEARVVTVVLDSKDSAQEVVELLTAAGADRVSALPQPGLDSD*
Ga0157370_1030989813300013104Corn RhizosphereDAAVERLRAGGPPAREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHRPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD*
Ga0157369_1086044313300013105Corn RhizosphereMTPFVVAAFKDPVAADAAVERLRASGPPTREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHRPDDRHAVDYDDMVRKEARVVTVVLGPGESAKDVVDMLTAAGADRVSALPQPGLDDD*
Ga0157374_1002502743300013296Miscanthus RhizosphereMPVIGRLNVPVGVPMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVMLESSDSSQEVVDLLSAAGADRVSALPQPGLDND*
Ga0157372_1036112423300013307Corn RhizosphereMTPFVVAAFKDRLAADAAVERLRAGGPPTREVRVDSAPDVLDAAAIEVDEMATGGFFGNAARLLDELLGHPPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD*
Ga0134079_1020151213300014166Grasslands SoilMDPFVVAAFKQRAAAEDAVERVRSSGIATREIRVDTAPDVINAATIEADEMVTGGFFGNAARLLNDLFDHRTDERLAVDYDDLAHKEARVVTVVLDSRDSARQVEALLTAAGAERVSVLPQAGLVDD*
Ga0163163_1213228113300014325Switchgrass RhizosphereAPCRQAHIHYIAAGDPMTPFVVAAFNDRAAADAAVERLRTSGPPAREIRVESAPDVINAATIEVDEMASGGFFGNAARLLNELFDHPTDERHAVDYDDLVHKEARVVTVVLNSSDSAKEVADLLTAAGARRVSALPQPGLDAD*
Ga0157377_1005043123300014745Miscanthus RhizosphereMPVIGRLNVPVGVPMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARVVTVVLESSDSSQEVVDLLSAAGADRVSALPQPGLDND*
Ga0157379_1094486023300014968Switchgrass RhizosphereMPVIGRLNVPVGVPMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDND*
Ga0157379_1233736823300014968Switchgrass RhizosphereADAAVERLRASGPSAREIRVDSAPDVLNAGTIEVDEMATGGFFGNAARLLDELLGYRPDERHAVDYDDMVRKEARVVTVVLESGDSAQEGVDLLTAAGADRVSALPQPGLDND*
Ga0132258_1064453843300015371Arabidopsis RhizosphereMTPFVVAAFKDRAAADAAVERLRTSGPSAREIRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDELLGYRPDERHAVDYDDMVRKEARVVTVVLESADSAQEVVDLLTAAGADRVSALPQPGLDND*
Ga0247794_1004935123300024055SoilMTPFVVAAFKDRLAADAAVERLRAGGPPAREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHPPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD
Ga0207656_1005023123300025321Corn RhizosphereMTPFVVAAFKDRLAADAAVERLRAGGPPTREVRVDSAPDVLNAAAIEVDEMATGGFLGNAARLLDELLGHPPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD
Ga0207656_1005163923300025321Corn RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDND
Ga0207656_1005388023300025321Corn RhizosphereMTPFVVAAFKDRAAADAAVERLRASGPSAREIRVDSAPDVLNAGTIEVDEMATGGFFGNAARLLDELLGYRPDERHAVDYDDMVRKEARVVTVVLESGDSAQEVVDLLTAAGADRVSALPQPGLDND
Ga0207656_1015362213300025321Corn RhizosphereRLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG
Ga0207682_1017993513300025893Miscanthus RhizosphereTAMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG
Ga0207688_1005255333300025901Corn, Switchgrass And Miscanthus RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG
Ga0207643_1054022713300025908Miscanthus RhizosphereAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDN
Ga0207705_1148505313300025909Corn RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLSAAGADRVSALPQPGL
Ga0207657_1048848723300025919Corn RhizosphereMTPFVVAAFKDRLAADAAVERLRAGGPPAREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHPPDDRHAVDYDDMVHKEARVVTVVLDSTDAAQEVADLLAAAGADRVSALPQPGLDNG
Ga0207649_1038549423300025920Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDERHAVDYDDLAHKEARVVTVVLDSTDAAQEVADLLAAAGADRVSALPQPGLDNG
Ga0207649_1071716823300025920Corn RhizosphereMTPFVVAAFKDPVAADAAVERLRTSGAPMREVRVDTAPDVQNAAAIEVDEMATGGFFGNAARLLDELLGYRPDDRHAVDYDDMVHKQARVVTVVLDSKDSAQEVVELLTAAGADRVSALPQPGLDSD
Ga0207650_1012622933300025925Switchgrass RhizosphereMTPFVVAAFNDRAAADAAVERLRTSGPPAREIRVESAPDVINAATIEVDEMASGGFFGNAARLLNELFDHPTDERYAVDYDDLVHKEARVVTVVLNSSGSAKEVADLLTAAGARRVSALPQPGLDAD
Ga0207650_1037059813300025925Switchgrass RhizosphereQAARQPRVVPALEPPIRTRWVATGDRRGGDGRARVMPVIGRLNVPVGVPMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDND
Ga0207650_1107990323300025925Switchgrass RhizosphereMTPSVVAVFRKRAAAEAAVERLRESGPPAREIRVETGADVLNAEAIEIDEMATGGFVGNAARLLNDLLGHRADERHAVDYDDLAHKEACVVTVVLDSAGSAAAVADRLTAAGADRVSALPQPGLDDD
Ga0207644_1095353413300025931Switchgrass RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREARVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDND
Ga0207644_1174463013300025931Switchgrass RhizosphereMTPFVVAAFRDSSAADAAVERLRTSGPSAREIRVHTAPDVMNAASIEVDEIATGGFFGNAARLLVDLLGSPPDDRHALDYNDMAHKEARVVTVVLDSTDAAQQVAELLTTAGAERVSALPQPG
Ga0207690_1014473123300025932Corn RhizosphereMTPFVVAAFKDPVAADAAVERLRTGGPPAREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHPPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD
Ga0207690_1045654523300025932Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRTSGPSAREIRVDSAPDVLNAGAIEVDEMATGGFFGNAVRLLDELLGYRPDDQHAVDYDDMARKEARVVTVVLESGDSAQEVVDVLTAAGADRVS
Ga0207706_1022298323300025933Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDERQAVDYDDLAHKEARVVTVVLDSTDAAQEVADLLAAAGADRVSALPQPGLDNG
Ga0207706_1058535623300025933Corn RhizosphereRSQGAVQSMINRDPAATTSGTRRAGRGRPHDFPKTSMTPFVVAAFKDPAAADAAVERLRTSGPSAREIRVDSAPDVLNAGAIEVDEMATGGFFGNAVRLLDELLGYRPDDQHAVDYDDMARKEARVVTVVLESGDSAQEVVDVLTAAGADRVSALPQPGLDND
Ga0207706_1078747423300025933Corn RhizosphereMTPFVVAAFKDRLAADAAVERLRTGGPPAREVRVDTAPDVLNAAAIEVDEMATGGFFGNAARLLDELLGHPPDDRHAVDYDDMVRKEARVVTVVLDPGESAKDVVDLLTAAGADRVSALPQPGLDDD
Ga0207669_1058391313300025937Miscanthus RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLTASGADRVSALPQPGLDND
Ga0207689_1104967113300025942Miscanthus RhizosphereALFPETAMTPFVVAAFKDLAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG
Ga0207679_1038432523300025945Corn RhizosphereMTPFVVAAFNDRAAADAAVERLRTSGPPAREIRVESAPDVINAATIEVDEMASGGFFGNAARLLNELFDHPTDERYAVDYDDLVHKEARVVTVVLNSSDSAKEVADLLTAAGARRVSALPQPGLDAD
Ga0207679_1069871023300025945Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRGSGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDERHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRV
Ga0207668_1213738523300025972Switchgrass RhizosphereLFPETAMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG
Ga0207640_1007489743300025981Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRTSGPSAREIRVDSAPDVLNAGAIEVDEMATGGFFGNAVRLLDELLGYRPDDQHAVDYDDMARKEARVVTVVLESGDSAQEVVDVLTAAGADRVSALPQPGLDND
Ga0207677_1116932913300026023Miscanthus RhizosphereMGTRPAGKRAPALFPETAMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQEVADLLAAAGADRVSALPQPGLDNG
Ga0207677_1139537323300026023Miscanthus RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVV
Ga0207678_1029532623300026067Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSSDAAQDVADLLAAAGADRVSALPQPGLDNG
Ga0207708_1138472413300026075Corn, Switchgrass And Miscanthus RhizosphereAATTSGTRRAGRGRPHDFPKTSMTPFVVAAFKDPAAADAAVERLRTSGPSAREIRVDSAPDVLNAGAIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARVVTVVLESSDSSQEVVDLLTAAGADRVSALPQPGLDND
Ga0207702_1067493523300026078Corn RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAAAIEVDEMATGGFLGNAARLLDELLGHPPDDRHAVDYDDMVHKEARVVTVVLDSKDSAREVVDLLTAAGADRVSALPQPGLDSD
Ga0207641_1029333723300026088Switchgrass RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVMLESSDSSQEVVDLLSAAGADRVSALPQPGLDND
Ga0207683_1000633873300026121Miscanthus RhizosphereMTPFVVAAFKDRVAADAAVEHLRRSGPPTREVRVDSAPDVLNAATIEVDEMATGGFFGNAARLLDDLLGYRPDDRHAVDYDDLVRKEARLVTVVLESSDSSQEVVDLLSAAGADRVSALPQPGLDND
Ga0207698_1086592723300026142Corn RhizosphereMTPFVVAAFKDPAAADAAVERLRESGTTTREIRVETAPDVMNAASIEVDEMASGGFFGNAARLLNDLLGYRPDDRHAVDYDDLAHKEARVVTVVLDSTDAAQEVADLLAAAGADRVSALPQPGLDNG
Ga0207698_1119917813300026142Corn RhizosphereMTPFVVAAFRDSSAADAAVERLRTSGPSAREIRVHTAPDVMNAASIEVDEIATGGFFGNAARLLVDLLGSPPDDRHALDYNDMAHKEARVVTVVLDSTDAAQ
Ga0308174_1000802623300031939SoilMDPFVVAAFKQRAAAEDAVERVRSSGIATREIRVDTAPDVINAATIEADEMATGGFFGNAARLLNDLFDHRTDERLAVDYDDLAHKEARVVTVVLDSRDSARQVEALLTAAGAERVSVLPQAGLVDD
Ga0308174_1005059923300031939SoilMTPFVVAAFKDRAAADVAVERLRTSGPPTRGVRVDSAPDVLNAGTIEVDEMATGGFFGNAARLIDDLLGYRPDDRHAVDYDDLARKEAKVVTVMLESGDSAQQVVDLLTAAGADRVSALPQPGLDNG
Ga0308174_1027360423300031939SoilMTPFVVAAFKDRAAADAAVERLRTSGPSAREIRVDSAPDVLNAGTIEVDEMATGGFFGNAARLLDELFGHRPDDQHAVDYDDMVRKEARVVTVVLGPGDSAQQVVDLLTAAGADRVSALPQPGLDND
Ga0308174_1094440213300031939SoilMTPFVVAAFKDRAAADAAAERLRTSGPPTREIRVDTAPDVLNAATIEVDEMATGGFFGNAARLLDELFDYRPDDRHAVDYDDLVRREARIVTVVLESGAAAKQVADFLTAAGADRVSALPQPGLDND
Ga0308174_1110979113300031939SoilMTPFVVAVFRDSSAADAAVERLRASGVSTREIRVHTAPDVLNANTIEVDELATGGFFGNAARLLVDLLGSPPDDRHALDYNDMAHKAARVVTVVLDSTDAAQQVAELLTAAGAARVSALPQPGLDNG
Ga0308176_1120526123300031996SoilMTPFVVAAFSDLPAADAAVERLRSSGLPTREIRVETAPDVLNAASIEVDEMATGGFFGNAARLLNDLLGHPVDDRHAVDYDDLAHKEARVVTVVLDSGDAAQEVVDLLSAAGAKRVSALPQPGLDND
Ga0308173_1004125643300032074SoilMDPFVVAAFKQRAAAEDAVERVRSSGIATREIRVDTAPDVINAATIEADEMATGGFFGNAARLLNDLFDHRTDERLAVDYDDLAHKEARVVTVVLDSRDSARQVEALLTAA
Ga0308173_1005700513300032074SoilRAAAEDAVERVRSSGIATREIRVDTAPDVINAATIEADEMVTGGFFGNAARLLNDLFDHRTDERLAVDYDDLAHKEARVVTVVLDSRDSARQVEALLTAAGAERVSVLPQAGLVDD
Ga0308173_1007859313300032074SoilAADVAVERLRTSGPPTRGVRVDSAPDVLNAGTIEVDEMATGGFFGNAARLIDDLLGYRPDDRHAVDYDDLARKEAKVVTVMLESGDSAQQVVDLLTAAGADRVSALPQPGLDNG
Ga0308173_1029653933300032074SoilTPFVVAAFKDRAAADMAVERLRTSGPPTRGVRVDSAPDVLNAGTIEVDEMATGGFFGNAARLIDDLLGYRPDDRHAVDYDDLVRKEARIVTVVLESGDAAKQVADFLTAAGADRVSALPQPGLDND
Ga0308173_1049354913300032074SoilMTPFVVAVFRDSSAADAAVERLRASGVSTREIRVHTAPDVLNANTIEVDELATGGFFGNAARLLVDLLGSPPDDRHALDYNDMAHKAARVVTVVLDSTEAAQQVAELLTAAGAARVSALPQPGLDNG
Ga0308173_1076136723300032074SoilMTPFVVAAFNDPAAADAAVQRLRTSGPPTREIRVDTAPDVLNAAAIEVDEVATGGFFGNAARLLNELLGRPVDDRHAVDYDDLAQKEARVVTVVLDSGDAAQEVVDLLSAAGAKRVSALPQPGLDND

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.