Metagenome / Metatranscriptome Family F089082

Basic Information
Family ID	F089082
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	48 residues
Representative Sequence	MTDRTFDTNQMLAAAREAFAPVLKAQQEGFKTIERLARLQYAVAGDVL
Number of Associated Samples	96
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.58 %
% of genes near scaffold ends (potentially truncated)	98.17 %
% of genes from short scaffolds (< 2000 bps)	89.91 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (58.716 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.771 % of family members)
Environment Ontology (ENVO)	Unclassified (23.853 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.376 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.63% β-sheet: 0.00% Coil/Unstructured: 47.37%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13561	adh_short_C2	60.55
PF00106	adh_short	8.26
PF09361	Phasin_2	7.34
PF07879	PHB_acc_N	3.67
PF07167	PhaC_N	2.75
PF00472	RF-1	0.92
PF09712	PHA_synth_III_E	0.92
PF05233	PHB_acc	0.92
PF13193	AMP-binding_C	0.92
PF00561	Abhydrolase_1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG5394	Polyhydroxyalkanoate (PHA) synthesis regulator protein, binds DNA and PHA	Signal transduction mechanisms [T]	4.59
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	2.75
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.92
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.72 %
Unclassified	root	N/A	41.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.72 %
Unclassified	root	N/A	41.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.72 %
Unclassified	root	N/A	41.28 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.88 %
Unclassified	root	N/A	41.28 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	55.05 %
Unclassified	root	N/A	41.28 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.28 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.83 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.92 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.28 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.92 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100299368	All Organisms → cellular organisms → Bacteria	2253	Open in IMG/M
3300005363\|Ga0008090_10197554	Not Available	719	Open in IMG/M
3300005533\|Ga0070734_10268160	Not Available	978	Open in IMG/M
3300005542\|Ga0070732_11034006	Not Available	502	Open in IMG/M
3300005548\|Ga0070665_100055230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3983	Open in IMG/M
3300005560\|Ga0066670_11026397	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005586\|Ga0066691_10217914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1115	Open in IMG/M
3300005586\|Ga0066691_10966358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	501	Open in IMG/M
3300005764\|Ga0066903_105583412	Not Available	662	Open in IMG/M
3300005834\|Ga0068851_10198294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1119	Open in IMG/M
3300006046\|Ga0066652_100334866	Not Available	1357	Open in IMG/M
3300006059\|Ga0075017_101592423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	515	Open in IMG/M
3300006237\|Ga0097621_100566049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1036	Open in IMG/M
3300006358\|Ga0068871_100764582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	889	Open in IMG/M
3300006797\|Ga0066659_11482684	Not Available	568	Open in IMG/M
3300006806\|Ga0079220_12140092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	502	Open in IMG/M
3300009826\|Ga0123355_11727468	Not Available	595	Open in IMG/M
3300010048\|Ga0126373_11181075	Not Available	831	Open in IMG/M
3300010049\|Ga0123356_10280469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1761	Open in IMG/M
3300010049\|Ga0123356_10435949	Not Available	1456	Open in IMG/M
3300010301\|Ga0134070_10311007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	603	Open in IMG/M
3300010321\|Ga0134067_10477474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	513	Open in IMG/M
3300010335\|Ga0134063_10646235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	542	Open in IMG/M
3300010361\|Ga0126378_10381488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1521	Open in IMG/M
3300010361\|Ga0126378_12059093	Not Available	651	Open in IMG/M
3300010375\|Ga0105239_11333431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	828	Open in IMG/M
3300010376\|Ga0126381_102583522	Not Available	727	Open in IMG/M
3300012202\|Ga0137363_10522792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	998	Open in IMG/M
3300012927\|Ga0137416_11267930	Not Available	665	Open in IMG/M
3300012927\|Ga0137416_11996037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	532	Open in IMG/M
3300012929\|Ga0137404_10209903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1654	Open in IMG/M
3300012984\|Ga0164309_10020406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3466	Open in IMG/M
3300013306\|Ga0163162_13340552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	513	Open in IMG/M
3300014501\|Ga0182024_12944422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	503	Open in IMG/M
3300015264\|Ga0137403_10150548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2293	Open in IMG/M
3300015356\|Ga0134073_10004246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2978	Open in IMG/M
3300016294\|Ga0182041_10733738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	878	Open in IMG/M
3300016294\|Ga0182041_10836403	Not Available	824	Open in IMG/M
3300016294\|Ga0182041_11163665	Not Available	702	Open in IMG/M
3300016319\|Ga0182033_11244195	Not Available	668	Open in IMG/M
3300016371\|Ga0182034_11318278	Not Available	630	Open in IMG/M
3300016404\|Ga0182037_10164596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1686	Open in IMG/M
3300017657\|Ga0134074_1254875	Not Available	632	Open in IMG/M
3300017927\|Ga0187824_10005789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	3464	Open in IMG/M
3300017936\|Ga0187821_10176923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	814	Open in IMG/M
3300017937\|Ga0187809_10117186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	903	Open in IMG/M
3300017937\|Ga0187809_10222249	Not Available	676	Open in IMG/M
3300017961\|Ga0187778_10030920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	3274	Open in IMG/M
3300017970\|Ga0187783_11378646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	508	Open in IMG/M
3300017972\|Ga0187781_10461470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	910	Open in IMG/M
3300017972\|Ga0187781_11347455	Not Available	527	Open in IMG/M
3300017973\|Ga0187780_10650712	Not Available	758	Open in IMG/M
3300017974\|Ga0187777_10199065	Not Available	1350	Open in IMG/M
3300018034\|Ga0187863_10262599	Not Available	960	Open in IMG/M
3300018085\|Ga0187772_10131824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1639	Open in IMG/M
3300018085\|Ga0187772_11348494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	529	Open in IMG/M
3300018086\|Ga0187769_10027313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3845	Open in IMG/M
3300018090\|Ga0187770_10897106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	711	Open in IMG/M
3300019273\|Ga0187794_1536662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1030	Open in IMG/M
3300019789\|Ga0137408_1482926	Not Available	1315	Open in IMG/M
3300020583\|Ga0210401_10542858	Not Available	1025	Open in IMG/M
3300021088\|Ga0210404_10103516	Not Available	1439	Open in IMG/M
3300021168\|Ga0210406_10434641	Not Available	1047	Open in IMG/M
3300021403\|Ga0210397_10637365	Not Available	816	Open in IMG/M
3300021432\|Ga0210384_10328337	Not Available	1377	Open in IMG/M
3300021478\|Ga0210402_10474485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1162	Open in IMG/M
3300021559\|Ga0210409_10118967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2429	Open in IMG/M
3300021560\|Ga0126371_12732701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	598	Open in IMG/M
3300021953\|Ga0213880_10209266	Not Available	551	Open in IMG/M
3300022557\|Ga0212123_10561961	All Organisms → cellular organisms → Bacteria → Proteobacteria	728	Open in IMG/M
3300025911\|Ga0207654_10111346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1704	Open in IMG/M
3300025917\|Ga0207660_10376520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1141	Open in IMG/M
3300026121\|Ga0207683_10053295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3546	Open in IMG/M
3300026295\|Ga0209234_1070860	Not Available	1326	Open in IMG/M
3300026295\|Ga0209234_1087273	Not Available	1182	Open in IMG/M
3300026312\|Ga0209153_1046787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1524	Open in IMG/M
3300026333\|Ga0209158_1279652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	573	Open in IMG/M
3300027043\|Ga0207800_1042071	Not Available	633	Open in IMG/M
3300027521\|Ga0209524_1128114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	528	Open in IMG/M
3300027648\|Ga0209420_1160019	Not Available	613	Open in IMG/M
3300027681\|Ga0208991_1210131	Not Available	562	Open in IMG/M
3300028047\|Ga0209526_10206597	Not Available	1358	Open in IMG/M
3300028381\|Ga0268264_11137180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	790	Open in IMG/M
3300031474\|Ga0170818_102322546	Not Available	688	Open in IMG/M
3300031561\|Ga0318528_10161443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1195	Open in IMG/M
3300031572\|Ga0318515_10470322	Not Available	672	Open in IMG/M
3300031573\|Ga0310915_11002420	Not Available	583	Open in IMG/M
3300031679\|Ga0318561_10121587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1387	Open in IMG/M
3300031682\|Ga0318560_10306252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	856	Open in IMG/M
3300031740\|Ga0307468_100210916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1325	Open in IMG/M
3300031754\|Ga0307475_10330027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1225	Open in IMG/M
3300031798\|Ga0318523_10266701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	855	Open in IMG/M
3300031819\|Ga0318568_10325170	Not Available	956	Open in IMG/M
3300031819\|Ga0318568_10835518	Not Available	571	Open in IMG/M
3300031880\|Ga0318544_10025059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2035	Open in IMG/M
3300031941\|Ga0310912_10365083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1122	Open in IMG/M
3300032008\|Ga0318562_10216309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1111	Open in IMG/M
3300032008\|Ga0318562_10911985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	501	Open in IMG/M
3300032041\|Ga0318549_10391829	Not Available	626	Open in IMG/M
3300032043\|Ga0318556_10233316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	959	Open in IMG/M
3300032043\|Ga0318556_10397447	Not Available	721	Open in IMG/M
3300032054\|Ga0318570_10509108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	549	Open in IMG/M
3300032063\|Ga0318504_10351141	Not Available	701	Open in IMG/M
3300032065\|Ga0318513_10614600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	532	Open in IMG/M
3300032067\|Ga0318524_10151691	Not Available	1172	Open in IMG/M
3300032089\|Ga0318525_10177151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1095	Open in IMG/M
3300032770\|Ga0335085_12007770	Not Available	587	Open in IMG/M
3300032955\|Ga0335076_10639392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	946	Open in IMG/M
3300033158\|Ga0335077_10834123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	935	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.99%
Host-Associated	Host-Associated	11.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.57%
Plants	Host-Associated → Plants	8.26%
Aquatic	Environmental → Aquatic	6.42%
Arthropoda	Host-Associated → Arthropoda	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.65%
Freshwater	Environmental → Aquatic → Freshwater	4.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.67%
Digestive System	Host-Associated → Arthropoda → Digestive System	2.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.75%
Roots	Host-Associated → Plants → Roots	1.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.92%
Sediment	Environmental → Aquatic → Sediment	0.92%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.76%
Loam	Environmental → Terrestrial → Soil → Loam	7.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.59%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	2.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.75%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.67%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.75%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	2.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019273	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300027043	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 11 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1002993684	3300005332	Tropical Forest Soil	MTDPTFDPNTVLAATREAFAPVFKAQQEGFRAFERLVRLNYAVA
Ga0008090_101975541	3300005363	Tropical Rainforest Soil	MTDRTFDTNQMLAAAREAFAPMLKAQQEGFKTIERLARLQYAVAGDVLETG
Ga0070734_102681602	3300005533	Surface Soil	MSDQTFDWLETYRDTFASVHKAQEQGLKAIERFARFQYAVAGDYLEAGIAQTQAALAA
Ga0070732_110340062	3300005542	Surface Soil	MDTPYRSTHMIDRTFDPNTLINATREAFAPVLKAQQEGFKTFERLARLQFAVAG
Ga0070665_1000552301	3300005548	Switchgrass Rhizosphere	MTDRTFDPNSWLDAYRETFASVHKSQEEGFKAVERFARFQYAVAGDCLEAGIAQTQAVLA
Ga0066670_110263971	3300005560	Soil	MSDRTFDPNTMIAAARESFAPLLKAQQEGFKAVERLARLQYAFAGDVL
Ga0066691_102179141	3300005586	Soil	MSDRTFDPNTMIAAARESFAPLLKAQQEGFKAVER
Ga0066691_109663582	3300005586	Soil	MIDRTFDPTTMIAAAREAFAPVLKAQQEGFKTLERLARLQYAVAG
Ga0066903_1055834121	3300005764	Tropical Forest Soil	MIDRTFDTNHMLTAAREAFAPMLKAQQEGFKTIERLARLQYAVAGDVLETGF
Ga0068851_101982942	3300005834	Corn Rhizosphere	MTDRTFDPNTWLDAYRETFASVHKSQEEGFKAVERFARFQYAVAGDCLEAGIAQTQA
Ga0066652_1003348663	3300006046	Soil	LKTPPAPETTMIDRTFDPNAMIAAAREAFAPVLKAQQEGFKTIERLARLQYAVAGDVLESGLARVN
Ga0075017_1015924232	3300006059	Watersheds	MIDRTFDPNTLINATREAFAPVIKAQQEGFKTLERLARLQYAVAGD
Ga0097621_1005660492	3300006237	Miscanthus Rhizosphere	MTDRTFDPNSWLDAYRETFASVHKSQEEGFKAVERFARFQYAVAGDCLEAGIAQTQAALA
Ga0068871_1007645822	3300006358	Miscanthus Rhizosphere	MTDRTFDPNTWLDAYRETFASVHKSQEEGFKAVERFARFQY
Ga0066659_114826841	3300006797	Soil	MSDRTFDPNAWLDAYRETFAPVYKAQQEGFKTIERFARFQYSV
Ga0079220_121400922	3300006806	Agricultural Soil	MNERTFDPNTVLAATREAFAPVLKAQQDGFKTFERLARLQYAVAG
Ga0123355_117274682	3300009826	Termite Gut	MTDRIFDTNSILTATREAFAPVVKAQQDGFKTLERLARLQ
Ga0126373_111810752	3300010048	Tropical Forest Soil	MFDRTFDPNTLINATRDAFAPVLKAQQEGFKSLERLVRLQYAVAGDMLES
Ga0123356_102804693	3300010049	Termite Gut	MTDRIFDTNSILTATREAFAPVVKAQQDGFKTLERLARLQYAV
Ga0123356_104359491	3300010049	Termite Gut	MTDRTFDPNSLLSATREAFAPVLKAQQEGFKSFERLARLQYAVAGDVLESGLAR
Ga0134070_103110072	3300010301	Grasslands Soil	MVGVDGSGSNASETTMSDRTFDPNTMIAAARESFAPLLKAQQEGFKAVERLARLQYAFAGDVLET
Ga0134067_104774742	3300010321	Grasslands Soil	MVGVDGSGSNASETTMSDRTFDPSTMIAAARESFAPLLKAQQEGFKAVERLARLQYAFAGDVLETG
Ga0134063_106462352	3300010335	Grasslands Soil	MSDRTFDPSTMIAAARESFAPLLKAQQEGFKAVERLARLQYAFAGD
Ga0126378_103814883	3300010361	Tropical Forest Soil	MRSTNIIDKTFDPNTLINATREAFAPMIKAQQEGFKTLERLARLNYAVAGDVLESSLAR
Ga0126378_120590932	3300010361	Tropical Forest Soil	MIDKTFDPNTLINATREAFAPMIKAQQEGFKTLERLARLNYAVAGDVLESSLAR
Ga0105239_113334312	3300010375	Corn Rhizosphere	MTDRTFDPNTWLDAYRETFASVHKSQEEGFKAVERFARFQYAVAGDCL
Ga0126381_1025835221	3300010376	Tropical Forest Soil	MIDKTFDPNTLINATREAFAPMIKAQQEGFKTLERLARLNYAVAGDVLESSLARV
Ga0137363_105227922	3300012202	Vadose Zone Soil	MTDRTFDPNAWLDAYRETFAPVYKAQQEGFKTIERFARFQYSVAGDYLES
Ga0137416_112679301	3300012927	Vadose Zone Soil	MIDRTFDPNTMIAAAREAFAPVLKAQQEGFKTIERLARLQY
Ga0137416_119960371	3300012927	Vadose Zone Soil	MSDRTFDPTTWLDSFRETFASVHKAQQEGFKAVERMARFQYAVAGDYLEAGIAQTQA
Ga0137404_102099031	3300012929	Vadose Zone Soil	MTDRTFDPNAWLDAYRETFAPVYKAQQEGFKTIERF
Ga0164309_100204061	3300012984	Soil	MRVIPPGPEMTNMTDHTFDPTTVLTATREAFAPVLKAQQEGFKALERLARLQYAVAGDVLESGLARVHA
Ga0163162_133405522	3300013306	Switchgrass Rhizosphere	MTNMTDHTFDPTTVLTATREAFAPVLKAQQEGFKALERLARLQYAVAGDVLESGLARVHASFAA
Ga0182024_129444222	3300014501	Permafrost	MIDRTFDPTSLLNAARDAFAPVLKAQQEGFKSIERLARLQFAVAGDVLE
Ga0137403_101505481	3300015264	Vadose Zone Soil	MTDRTFDPNAWLDAYRETFAPVYKAQQEGFKTIERFARFQYSVAGDYL
Ga0134073_100042461	3300015356	Grasslands Soil	MVGVDGSGSNASETTMSDRTFDPNTMIAAARESFAPLLKAQQEGFKAVERLARLQYAFAGDVLETG
Ga0182041_107337382	3300016294	Soil	MIDRTFDTNHMLTAAREAFAPMLKAQQEGFKTIERL
Ga0182041_108364032	3300016294	Soil	MTERTFDTNQILTAAREAFAPMLKAQQEGFKTIERLA
Ga0182041_111636652	3300016294	Soil	MTDRTFDTNHMLTAAREAFAPMLKAQQEGFKTIERLARLQYAVAGDVLEAGFARVNATFVAAT
Ga0182033_112441952	3300016319	Soil	MTDRTFDPNQMLAAARDAFAPMLKAQQEGFKTLERIAR
Ga0182034_113182782	3300016371	Soil	MTDRTFDPNQMLAAARDAFAPMLKAQQEGFKTLERIARLQYAVAGDVLE
Ga0182037_101645963	3300016404	Soil	MIDRTFDTNHMLTAAREAFAPMLKAQQEGFKTIERLARL
Ga0134074_12548751	3300017657	Grasslands Soil	MSDRTFDPNTMIAAARESFAPLLKAQQEGFKAVERL
Ga0187824_100057891	3300017927	Freshwater Sediment	MIDRTFDPNTLINATREAFAPVLKAQQEGFKTFERLA
Ga0187821_101769231	3300017936	Freshwater Sediment	MTDRTFDTNQMLAAAREAFAPLLKAQQEGFRTFERLARLQYAVAGDVLETGIA
Ga0187809_101171861	3300017937	Freshwater Sediment	MIDRSFDTNQMLAAARETFAPMLKAQQEGFKTLERLARLQYAVAGDVLETG
Ga0187809_102222491	3300017937	Freshwater Sediment	MTDRTFDPNQMLAAAREAFAPMLKAQQESFKTLERLARLQYAVAGDVLETG
Ga0187778_100309201	3300017961	Tropical Peatland	MIDKTFDPSTLINATREAFAPMIKAQQEGFKTFERV
Ga0187783_113786462	3300017970	Tropical Peatland	MMTDRTFDPSAIIAAARDAFAPVIKAQHESFKTVERLARLQYAV
Ga0187781_104614701	3300017972	Tropical Peatland	MTTRTFDPNTLIAATREAFAPVLKAQQEGFKTIERLARLQYAV
Ga0187781_113474551	3300017972	Tropical Peatland	MTTRTFDPNTLIAATREAFAPVFKAQQEGFKTFER
Ga0187780_106507121	3300017973	Tropical Peatland	MMTDRTFDPNTLIAATREAFAPVIKAQHEGFKTLERLAR
Ga0187777_101990651	3300017974	Tropical Peatland	MMTDRTFDPSAVIAAARDAFAPVIKAQHEGFKTVERLARLQYAVAGDV
Ga0187863_102625991	3300018034	Peatland	MTTQTFDPTTVLAATREALAPVLKAQQEGFKTLERLARLQYAVAGDVLETSLARVNATF
Ga0187772_101318241	3300018085	Tropical Peatland	MIDKTFDPNSLINATREAFAPLIKAQQEGFKTLER
Ga0187772_113484942	3300018085	Tropical Peatland	MITDRTFDPNALIAATREAFAPVIKAQHEGFKTLERLASAVCRRR
Ga0187769_100273131	3300018086	Tropical Peatland	MTSHTFDPNGMFAAAREALAPAFKAQHESFKTLERLARWQYA
Ga0187770_108971061	3300018090	Tropical Peatland	MTTRTFDPNTLIAATREAFAPVLKAQQEGFKTFERLAR
Ga0187794_15366622	3300019273	Peatland	MIDKTFDPNTLINATREAFAPVLKAQQEGFKTFERLARLNYAVAGDMLE
Ga0137408_14829261	3300019789	Vadose Zone Soil	MSERTFDPNTWLDSFRDTFASVHKAQQEGFKAVERLARFQYAVAGDYLEAVSRRRRPR
Ga0210401_105428581	3300020583	Soil	MTDQNFDTTKFLAATREAFAPMLKSQQEGFKALERIARLQYAVAGDVLESGLA
Ga0210404_101035161	3300021088	Soil	MIDRTFDPSTLINATREAFAPVLKAQQEGFKTLERLARLQYAVAGDVLESSLARVHA
Ga0210406_104346411	3300021168	Soil	MTDRIFDPNTWFDAYREAYASVYKAQQEAFKAVERFARVQY
Ga0210397_106373652	3300021403	Soil	MFDRNFDPSTLMANAREAFAPVLKAQQEGFKTIERLARLQYAVAGDVLESGLARVNA
Ga0210384_103283373	3300021432	Soil	MIDRTFDPTTMIAAAREAFAPVLKAQQEGFKNIER
Ga0210402_104744851	3300021478	Soil	MFDRNFDPSTLMANAREAFAPVLKAQQEGFKTIERLARLQYAVAGDVLESGLAR
Ga0210409_101189674	3300021559	Soil	MIDRTFDPTTMIAAAREAFAPVLKAQQEGFKNIERLA
Ga0126371_127327011	3300021560	Tropical Forest Soil	MTDRTFDPNSMMTAAREALAPVLKAQQEGFKSLERLARLQYAL
Ga0213880_102092661	3300021953	Exposed Rock	MTDRTFDTNQMLAAAREAFAPMLKAQQEGFRTFERLARL
Ga0212123_105619611	3300022557	Iron-Sulfur Acid Spring	MNDRTFDPTAMIAAAREAFAPVLKAQQEGFKTLERLARLQYAVAGDVL
Ga0207654_101113463	3300025911	Corn Rhizosphere	MTDRTFDPNTWLDAYRETFASVHKSQEEGFKAVERFARFQYA
Ga0207660_103765203	3300025917	Corn Rhizosphere	MTDRTFDPNAVLAATREAFAPVLKAQQDGFKAFERLARLQY
Ga0207683_100532951	3300026121	Miscanthus Rhizosphere	MTDHTFDPTTVLTATREAFAPVLKAQQEGFKALERLA
Ga0209234_10708603	3300026295	Grasslands Soil	MIDRTFDPNTMIAAAREAFAPVLKAQQEGFKTLER
Ga0209234_10872732	3300026295	Grasslands Soil	MIDRTFDPNTMIAAAREAFAPVLKAQQEGFKTLERLARLQYAVAGDVLESGLARVNV
Ga0209153_10467873	3300026312	Soil	MIDRTFDPNTMIAAAREAFAPVLKAQQEGFKTLERLARLQYAVAGDVLESGLARVS
Ga0209158_12796521	3300026333	Soil	MIDRTFDPTTMIAAAREAFAPVLKAQQEGFKTLERLARLQYAVAGDVLESGLARVNVAFSATN
Ga0207800_10420712	3300027043	Tropical Forest Soil	MTNRSFDPDTLVAATREMFAPLVKAQHDGFKSLETLARLQYAVAGDVLESGL
Ga0209524_11281142	3300027521	Forest Soil	MMDRTFDPTTMIAAAREAFAPVLKAQQEGFKTIERLARLQYAVAGDVLDSGLARVNA
Ga0209420_11600191	3300027648	Forest Soil	MTDRTFDPNAMLTAARDAFAPVLKAQQEGFKTIERLARLQYAVAGDLLESNLARVN
Ga0208991_12101311	3300027681	Forest Soil	MSERTFDPNTWLDSFRETFASVHKAQQEGFKAVERMARFQ
Ga0209526_102065971	3300028047	Forest Soil	MIDRTFDPATMIAAAREAFAPVLKAQQEGFKNIERLARLQYAVAGDVLENGLARVNA
Ga0268264_111371802	3300028381	Switchgrass Rhizosphere	MTDRTFDPNSWLDAYRETFASVHKSQEEGFKAVERFARFQYAVAGDCLEAGIAQTQAV
Ga0170818_1023225461	3300031474	Forest Soil	MTDRIFDPNTWFDVYREAYASVYKSQQEAFKAVERFARVQYAVAGDYLESGLAQAH
Ga0318528_101614433	3300031561	Soil	MTDRTFDTNQMLAAAREAFAPVLKAQQEGFKTIERLARLQYAVA
Ga0318515_104703221	3300031572	Soil	MTDRTFDTNHMLTAAREAFAPMLKAQQEGFKTIDRLARLQ
Ga0310915_110024202	3300031573	Soil	MTERTFDTNQILTAAREAFAPMLKAQQEGFKTIERL
Ga0318561_101215871	3300031679	Soil	MTDRTFDTNQMLAAAREAFAPVLKAQQEGFKTIER
Ga0318560_103062521	3300031682	Soil	MTDRTFDTNQMLAAAREAFAPVLKAQQEGFKTIERLARLQYAVAG
Ga0307468_1002109161	3300031740	Hardwood Forest Soil	MIDRTFDPNTLIAAAREAFAPVLKAQQEGFKTIERLARLQYAVAGDVLESGLARVNAAFV
Ga0307475_103300272	3300031754	Hardwood Forest Soil	MTDRTFDPNQMLAAAREAFAPMLKAQQESFRTLERLARLQYA
Ga0318523_102667011	3300031798	Soil	MTDRTFDTNQMLAAAREAFAPVLKAQQEGFKTIERLARLQYAVAGDVL
Ga0318568_103251702	3300031819	Soil	MTDRSFDTNQMIAAAREAFAPMFKAQQEGFRTFERLARLHYAVAGDVLETG
Ga0318568_108355182	3300031819	Soil	MTERTFDTNQILTAAREAFAPMLKAQQEGFKTIERLARLQYAVAGDVLETGFA
Ga0318544_100250594	3300031880	Soil	MTDRTFDTNQMLAAAREAFAPVLKAQQEGFKTIERLARLQY
Ga0310912_103650831	3300031941	Soil	MIDRTFDTNHMLTAAREAFAPMLKAQQEGFKTIERLARLQYAVAGD
Ga0318562_102163091	3300032008	Soil	MTDRTFDPNQMLAAAREAFAPMLKAQQEGFKTFERLARLQY
Ga0318562_109119852	3300032008	Soil	MTDRTFDTNQMLTAAREAFAPMLKAQQEGFKTLERLARLQ
Ga0318549_103918291	3300032041	Soil	MIDRTFDTNHMLTAAREAFAPMLKAQQEGFKTIERLARLQYAVAGDVLE
Ga0318556_102333161	3300032043	Soil	MTDRSFDTNQMIAAAREAFAPMFKAQQEGFRTFERLARLHYAVAGDVLETGFA
Ga0318556_103974472	3300032043	Soil	MTDRTFDTQQMLAAAREAFAPMLKAQQDGFRTFERLARLQYAVAGDVLETGIARM
Ga0318570_105091081	3300032054	Soil	MTDRTFDTNQMLAAAREAFAPVLKAQQEGFKTIERLARLQYAVAGDVLETGFA
Ga0318504_103511411	3300032063	Soil	MTERTFDTNQILTAAREAFAPMLKAQQEGFKTIERLARLQYAVAGDVLEAGFAR
Ga0318513_106146002	3300032065	Soil	MTDRTFDTNQMLAAAREAFAPVLKAQQEGFKTIERLARLQYA
Ga0318524_101516911	3300032067	Soil	MTDRSFDTNQMIAAAREAFAPMFKAQQEGFRTFERLARLHYAVAGDVLETGFARM
Ga0318525_101771511	3300032089	Soil	MTDRTFDTNQMLAAAREAFAPVLKAQQEGFKTIERLARLQYAVAGDV
Ga0335085_120077702	3300032770	Soil	MTDRTFDPNTVINATREVFAPVLKAQQEGFKTFERLARLQYAIAGDMLESSLARVHAGFV
Ga0335076_106393921	3300032955	Soil	MIDRTFDPSTLINATREAFAPVLKAQQEGFKTFERLARLQYQVAGDMLESTLARVHASFAAA
Ga0335077_108341231	3300033158	Soil	MTHLNDRTFDPSAMIAATREAFAPVLKAQQEGFKTFERIARLQYAVAGDVLESGLARI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089082

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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