Metagenome / Metatranscriptome Family F088974

Basic Information
Family ID	F088974
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	105 residues
Representative Sequence	LRSIPEDPTSDFLAGAGRIAMVARDMALARTLFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSVAIGDLATIKVR
Number of Associated Samples	101
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.75 %
% of genes near scaffold ends (potentially truncated)	95.41 %
% of genes from short scaffolds (< 2000 bps)	95.41 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Most Common Taxonomy
Group	Bacteria (69.725 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.174 % of family members)
Environment Ontology (ENVO)	Unclassified (42.202 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.706 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.26% β-sheet: 0.00% Coil/Unstructured: 42.74%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.1: Tetratricopeptide repeat (TPR)	d1wm5a2	1wm5	0.86454
a.118.8.1: Tetratricopeptide repeat (TPR)	d1w3ba_	1w3b	0.8186
a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains	d3txna1	3txn	0.81742
a.118.8.1: Tetratricopeptide repeat (TPR)	d1ya0a1	1ya0	0.81046
a.118.8.1: Tetratricopeptide repeat (TPR)	d3eska1	3esk	0.80368

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00202	Aminotran_3	66.06
PF02163	Peptidase_M50	0.92
PF13414	TPR_11	0.92
PF13620	CarboxypepD_reg	0.92
PF13432	TPR_16	0.92
PF13288	DXPR_C	0.92
PF01148	CTP_transf_1	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.64 %
Unclassified	root	N/A	29.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.64 %
Unclassified	root	N/A	29.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.72 %
Unclassified	root	N/A	29.36 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.12 %
Unclassified	root	N/A	29.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.75 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	40.37 %
Unclassified	root	N/A	29.36 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.75 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.37 %
Unclassified	root	N/A	29.36 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.92 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.92 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.37 %
Unclassified	root	N/A	29.36 %
Chloroflexi bacterium ADurb.Bin325	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin325	2.75 %
Hahellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae	0.92 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.37 %
Unclassified	root	N/A	29.36 %
Chloroflexi bacterium ADurb.Bin325	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin325	2.75 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.92 %
Hahella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella	0.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.37 %
Unclassified	root	N/A	29.36 %
Chloroflexi bacterium ADurb.Bin325	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin325	2.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.92 %
Hahella chejuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → Hahella chejuensis	0.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig62733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300000955\|JGI1027J12803_102444668	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300000956\|JGI10216J12902_108867904	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300004153\|Ga0063455_100367199	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300004153\|Ga0063455_100946182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300005169\|Ga0066810_10090273	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300005179\|Ga0066684_11091252	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005290\|Ga0065712_10197682	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300005332\|Ga0066388_108556543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300005438\|Ga0070701_11366247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300005446\|Ga0066686_10541581	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005458\|Ga0070681_11924519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Hahellaceae → Hahella → Hahella chejuensis	519	Open in IMG/M
3300005529\|Ga0070741_10658822	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005539\|Ga0068853_101060964	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005545\|Ga0070695_101277122	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300005563\|Ga0068855_101837308	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005564\|Ga0070664_101551823	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005764\|Ga0066903_102113942	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300005840\|Ga0068870_11069619	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005843\|Ga0068860_100684309	Not Available	1035	Open in IMG/M
3300006358\|Ga0068871_100062832	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300006854\|Ga0075425_102336387	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300006881\|Ga0068865_102140075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300006914\|Ga0075436_100315857	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300009137\|Ga0066709_103913282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300009147\|Ga0114129_12508190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300009148\|Ga0105243_13105784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300009176\|Ga0105242_12241199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300009177\|Ga0105248_10571704	Not Available	1275	Open in IMG/M
3300009177\|Ga0105248_12742222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300009551\|Ga0105238_10337973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin325	1493	Open in IMG/M
3300009650\|Ga0105857_1028904	Not Available	1465	Open in IMG/M
3300009662\|Ga0105856_1024368	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300010040\|Ga0126308_11225148	Not Available	532	Open in IMG/M
3300010046\|Ga0126384_11061904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300010366\|Ga0126379_11982542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300010397\|Ga0134124_11606627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300010398\|Ga0126383_11497849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300010398\|Ga0126383_11579661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300012212\|Ga0150985_119899806	Not Available	1074	Open in IMG/M
3300012354\|Ga0137366_10973542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300012685\|Ga0137397_10306925	Not Available	1183	Open in IMG/M
3300012925\|Ga0137419_10200962	Not Available	1475	Open in IMG/M
3300012927\|Ga0137416_10008267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	6088	Open in IMG/M
3300012948\|Ga0126375_10282915	Not Available	1141	Open in IMG/M
3300012955\|Ga0164298_10486701	Not Available	821	Open in IMG/M
3300012971\|Ga0126369_10141712	All Organisms → cellular organisms → Bacteria → Acidobacteria	2247	Open in IMG/M
3300012988\|Ga0164306_11032303	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	679	Open in IMG/M
3300012989\|Ga0164305_10267816	Not Available	1244	Open in IMG/M
3300013104\|Ga0157370_10849803	Not Available	829	Open in IMG/M
3300013105\|Ga0157369_10686114	Not Available	1055	Open in IMG/M
3300013297\|Ga0157378_12780281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300013308\|Ga0157375_12964869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300015242\|Ga0137412_10553890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	875	Open in IMG/M
3300015373\|Ga0132257_104432738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300015374\|Ga0132255_102574030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300015374\|Ga0132255_106216863	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300016294\|Ga0182041_10357037	Not Available	1230	Open in IMG/M
3300016294\|Ga0182041_11661838	Not Available	590	Open in IMG/M
3300016387\|Ga0182040_10506875	Not Available	965	Open in IMG/M
3300018000\|Ga0184604_10352634	Not Available	524	Open in IMG/M
3300019880\|Ga0193712_1095571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300019886\|Ga0193727_1112537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300020070\|Ga0206356_11738234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin325	1128	Open in IMG/M
3300021080\|Ga0210382_10272131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300021080\|Ga0210382_10293212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300021432\|Ga0210384_10408473	Not Available	1223	Open in IMG/M
3300023071\|Ga0247752_1060599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300024288\|Ga0179589_10573468	Not Available	527	Open in IMG/M
3300025903\|Ga0207680_11269868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300025909\|Ga0207705_10040576	All Organisms → cellular organisms → Bacteria	3339	Open in IMG/M
3300025921\|Ga0207652_11525728	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300025924\|Ga0207694_10241402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin325	1477	Open in IMG/M
3300025926\|Ga0207659_11060677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300025927\|Ga0207687_11052891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300025927\|Ga0207687_11893912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300025935\|Ga0207709_11180940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300025938\|Ga0207704_11095564	Not Available	677	Open in IMG/M
3300025940\|Ga0207691_10190357	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300025941\|Ga0207711_10692958	Not Available	950	Open in IMG/M
3300025944\|Ga0207661_11131435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300025960\|Ga0207651_10224297	Not Available	1521	Open in IMG/M
3300025986\|Ga0207658_11077418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300026041\|Ga0207639_11105800	Not Available	743	Open in IMG/M
3300026116\|Ga0207674_10606391	Not Available	1057	Open in IMG/M
3300026216\|Ga0209903_1020561	Not Available	1088	Open in IMG/M
3300026221\|Ga0209848_1010660	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300026300\|Ga0209027_1074234	Not Available	1259	Open in IMG/M
3300027903\|Ga0209488_10842040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300028381\|Ga0268264_12430915	Not Available	530	Open in IMG/M
3300028784\|Ga0307282_10311234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300028802\|Ga0307503_10776616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300028881\|Ga0307277_10540047	Not Available	523	Open in IMG/M
3300028885\|Ga0307304_10590918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300031231\|Ga0170824_113842725	Not Available	504	Open in IMG/M
3300031720\|Ga0307469_10371920	Not Available	1209	Open in IMG/M
3300031744\|Ga0306918_10839082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300031792\|Ga0318529_10289958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300031820\|Ga0307473_11138054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300031896\|Ga0318551_10432018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300031942\|Ga0310916_10164957	Not Available	1837	Open in IMG/M
3300031959\|Ga0318530_10224238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300031996\|Ga0308176_11712629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300032122\|Ga0310895_10727735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300032180\|Ga0307471_100333462	Not Available	1620	Open in IMG/M
3300032205\|Ga0307472_102406331	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300033412\|Ga0310810_10977313	Not Available	728	Open in IMG/M
3300033433\|Ga0326726_10137069	All Organisms → cellular organisms → Bacteria → Acidobacteria	2221	Open in IMG/M
3300033433\|Ga0326726_11748975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.30%
Host-Associated	Host-Associated	35.78%
Engineered	Engineered	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.55%
Plants	Host-Associated → Plants	35.78%
Aquatic	Environmental → Aquatic	2.75%
Modeled	Engineered → Modeled	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.84%
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Peat	Environmental → Terrestrial → Peat	1.83%
Sediment	Environmental → Aquatic → Sediment	0.92%
Roots	Host-Associated → Plants → Roots	0.92%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.60%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.67%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.75%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.92%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026216	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051 (SPAdes)	Environmental	Open in IMG/M
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0733.00004070	2166559005	Simulated	ELLTQAAAAARDGKADEVRSALQNIPEDPDAEYLAGAGRVAILAREMPLAKALFLRAIERDPSSYRATLGIASIFLLERDFDSASRAFDAARSRTHDKDEQKFLSAALSDLATIKVR
JGI1027J12803_1024446682	3300000955	Soil	VRASLQQLPADADAEYLAGAGRVAIVARDFVLARSLFARAIERDRMSYRATLGLASTFLFDRDFDSASRAFDAARNRTKDKEEQRFISAAIGDLATIKVR*
JGI10216J12902_1088679042	3300000956	Soil	DPAADYLAAAGRVALIAHDASLAQALFTRALERDPSSYRAALGIASTFLLLRDFDNASRAFDATRNRTRDKDEQKFLSAAIGDLATIKVR*
Ga0063455_1003671991	3300004153	Soil	QAASAARDGNLEAVRSALRVIPEDPGSDFLAAAARIAMVARDMPLARTLFMRALERDPTSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSVAIGDLATIKVR*
Ga0063455_1009461821	3300004153	Soil	YLAGAGRIAMVARDMPLARALFLRALERDPSSYRAALGIASMFLIERDFDSASRAFDAARSRTHDKDEQKFITIAIGDLQTIKVR*
Ga0066810_100902732	3300005169	Soil	ARGELLTQAAAAARDGKADEVRSALQNIPEDPDAAHLAGAGRVAILAREMPLAKALFLRAIERDPSSYRATLGIASIFLLERDFDSASRAFDAARSRTHDKDEQKFLSAALGDLATIKVR
Ga0066684_110912522	3300005179	Soil	DPTSDFLAGAGRVALVARDMALAQTLFKRALERDPSSYRAALGVSSIFLLQRDFDSASRAFDATRTRTHDKDEQKFLTAAIGDLATIKVR*
Ga0065712_101976821	3300005290	Miscanthus Rhizosphere	AAAAARDGNVDAVRAALRVIPEDPHSDFLAGAGRIAMVARDMSLARTLFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSMAIADLATVKLR*
Ga0066388_1085565431	3300005332	Tropical Forest Soil	EDADVEYLEGAGNIALIAHNPALARALFQRAIESDPTAYRATRGVASVFLLNRDFDSASRAFDAARSRTHDKDEMKFISAALGDLQTIRVR*
Ga0070701_113662472	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	FLIESAQAVRDGHADAVRASLQQLPADADADYLAGAGRVAIVARDFSLARSLFSRAIERDRMSYRATLGLASTFLYDRDFDSASRAFDAARNRTTDKEEQRFISAAIGDLATIKVR*
Ga0066686_105415811	3300005446	Soil	RGAFLTELAGLARGGKADDVRSALQRLPADPDADYLAAAGRIALLARDVNLAHTLFVRALERDPASYRAALGIASTFVLLRDFDSASRAFDATRNRTHDKDEQKFLSAAIGDLATIKVR*
Ga0070681_119245191	3300005458	Corn Rhizosphere	VKGQLLTQATAAARDAKAEEVRQALQVIPENPDADFLASAGRIAMVARDPALAKTLFTKALERDPSSYRAALGIASIFTLERDFDSASRAFDAARARTHDKDEQRFLTAAIGDLATIKVR
Ga0070741_106588222	3300005529	Surface Soil	FSQIPDDADANYFGAAGRIALVARDPGLARALFTKALEKDSNSYRAALGVASTFVMLRDFDNASRAFDAARTRTKDKDEQKFITVAIGDLATIRVR*
Ga0068853_1010609641	3300005539	Corn Rhizosphere	DADADYLSGAGRIAMLARDTPLARTLFLRALERDPASYRAAMGVASTLLIQRDFDNASRAFDAARSRTHDKDEQKFLTFAVGDLATIKAR*
Ga0070695_1012771221	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	DLVLKPLPTPSDERHGAILADALGAARAGQPNEAQALLGKGPEDADADYLGAAGRVAMVARRQDLAKALFLRSLERDPSSYRAALGIASIFLWQRDFDSASRAFDAARSRTHDKDEQRFISAAIGDLATIKVR*
Ga0068855_1018373081	3300005563	Corn Rhizosphere	FLAGAGRVAMVARDMGLAKTLFMRALEVDPSSYRAALGIASTFLIERDFDSASRAFDAARSRTHDKDEQKFLSAAIGDLATIRVR*
Ga0070664_1015518231	3300005564	Corn Rhizosphere	ALRSIPEDPTSDFLAGAGRIAMVARDMSLARTLFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSMAIADLATVKLR*
Ga0066903_1021139421	3300005764	Tropical Forest Soil	TALQNIPEDPDAEYLAGAGRVAILAREMPLAKALFLRAIERDPSSYRASLGIASIFLLERDFDSASRAFDAARSRTHDKDEQKFLTAALGDLATIKVR*
Ga0068870_110696192	3300005840	Miscanthus Rhizosphere	HSDFLAGAGRIAMVARDMALARTLFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSMAIGDLATIKVR*
Ga0068860_1006843092	3300005843	Switchgrass Rhizosphere	GHDADSEALLVKVPDDADADYLAAGGRIALVAHRPDLARALFSRALERDPSSYRAALGVASAFLLGRDFDSASRAFDAARNRTHDKDEQKFLTYAIGDLATIRVR*
Ga0068871_1000628321	3300006358	Miscanthus Rhizosphere	PEGVKGELLTQAAAAARDAKADEVRSALQGIPEDPDAEYLAGAGRVAILARELPLAKALFLRAIERDPSSYRATLGIASIFLLERDFDSASRAFDAARTRTHDKDEQKFINAALGDLATIKVR*
Ga0075425_1023363871	3300006854	Populus Rhizosphere	DALRSIPDDLDADGLASAGRVALCARDMGLAMTLFHRALERDPSSYRAALGVASLFLFQRDFDAASRAFDAARSRTHDKDEQRFISAAISELAAIKYR*
Ga0068865_1021400751	3300006881	Miscanthus Rhizosphere	AVRASLQQLPADADADYLAGAGRVAIVARDFSLARSLFSRAIERDRMSYRATLGLASTFLYDRDFDSASRAFDAARNRTTDKEEQRFISAAIGDLATIKVR*
Ga0075436_1003158572	3300006914	Populus Rhizosphere	KLAKAAKTDDVRTALLKMPDDPAADYLAAAGRIALMARDVPLAQTLFARALERDPASYRATLGMASVFTLQRDFDNASRAFDATRNRTGDKSEQKFLTAAIGDLATIKVR*
Ga0066709_1039132821	3300009137	Grasslands Soil	AALLRMPENPAADYLAAAGRIALLARDLPLAHTLFARALERDPASYRAALGIASVFVLQRDFDNASRAFDATRGRTGDKAEQKFLSAAIGDLATVKVR*
Ga0114129_125081901	3300009147	Populus Rhizosphere	KPNDARDALQTLPSDVDADSLAAAARIAVAARDMSLAQTLFRQALERDPASYRAALGIASLFLYQRDFDSASRAFDAARNRTHDKDEQRFISAAIGELAAIKYR*
Ga0105243_131057841	3300009148	Miscanthus Rhizosphere	LADALGAARAGQPNEAQALLAKVPEDADADYLGAAGRVAMVARRQDLAKALFLRSLERDPSSYRAALGIASIFLWQRDFDSASRAFDAARSRTHDKDEQRFISAAIGDLATIKVR*
Ga0105242_122411992	3300009176	Miscanthus Rhizosphere	VTDMAGAGRIALVARDLPLAKTLFMKALERDPSSYRAALGMASLFVLERDFDSASRTFDAARNRTHDKDEQKFLSAAIGDLATIKVR*
Ga0105248_105717042	3300009177	Switchgrass Rhizosphere	KPLTAIQDGHHAPLLSAAAAARDGHDADSEALLVKVPDDADADYLAAGGRIALVAHRPDLARALFSRALERDPSSYRAALGVASAFLLGRDFDSASRAFDAARNRTHDKDEQKFLTYAIGDLATIRVR*
Ga0105248_127422222	3300009177	Switchgrass Rhizosphere	DFLAGAGRIAMVARDMALARTLFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSVAIGDLATIKVR*
Ga0105238_103379731	3300009551	Corn Rhizosphere	QVRTLLTRVSDGADADYLAGAGRIAMLARDTALARTLFLRALERDPASYRASLGVASTLLLQRDFDNASRAFDAARNRTHDKDEQKFLTFAIGDLATIKSR*
Ga0105857_10289042	3300009650	Permafrost Soil	DGKADQVRASLQVIPEDPDADYLACAGRIAMVVRDLGLSRTLFVRALERDPSSYRAALGVASMYLLERDFDNASHAFDAARGRTHDKDEQKFLSAAIGDLATIKVR*
Ga0105856_10243683	3300009662	Permafrost Soil	GKTDQVRASLQMLSEDPDSEYLSAAGRIAMVAGDLSLARTLFTKALERDPSSYRAALGVASTFVIQRDFDSASRAFDAARNRTHDKDEQKFLSVAIGDLATIVVR*
Ga0126308_112251481	3300010040	Serpentine Soil	DAGGQFLMEVADFARAGKTDEVRLALQRLPLDPASDYLASAGRIAMVARDMTLARELFVRALERDPSSYRAALGVASMFLLQRDFDRASRAFDAARARTHDKNEQRFLSAALGDLATIRYNK*
Ga0126384_110619042	3300010046	Tropical Forest Soil	IPEDADADYLAGAGRVAMLARKPDLAYALFVRALERDPSSYRAALGVASTFLLRRDFDSASRAFDAARSRTHDKDEQKFISYAIGDLATIRVR*
Ga0126379_119825422	3300010366	Tropical Forest Soil	DAEYLAAAGRVALIAHRQDAARALFMRALERDPSSFRGALGIASTFLLQRDFDSASRAFDAARNRTRDKDEQKFLSFAIGDLATIRVR*
Ga0134124_116066272	3300010397	Terrestrial Soil	SDFLAGAGRIAMVARDMSLARTLFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSMAIADLATVKLR*
Ga0126383_114978492	3300010398	Tropical Forest Soil	AEYLAGAGRVAILAREMPLAKALFLRAIERDPSSYRASLGIASIFLLERDFDSASRAFDAARSRTHDKDEQKFLSAALGDLATIKVR*
Ga0126383_115796612	3300010398	Tropical Forest Soil	GREADAEALLLKVPEDADAEYLAAAGRVALVAHRRDAARALFMRALERDPSSFRGALGIASTFLLQRDFDSASRAFDAARNRTHDKDEQKFISYAIADLATIRVR*
Ga0150985_1198998062	3300012212	Avena Fatua Rhizosphere	AARDGNLEAVRSALRVIPEDPGSDFLAAAARIAMVARDMPLARTLFMRALERDPTSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSVAIGDLATIKVR*
Ga0137366_109735421	3300012354	Vadose Zone Soil	PDDVSGRLLGEALEAARGGKTEVVRTALSQIPADPTGDYLAGAARVALVARDFALAQSLFKRALERDPSSYRAAMGVASIFLLQRDFDSASRAFDATRSRTHDKDEQKFLSVAIGDLATIKVR*
Ga0137397_103069251	3300012685	Vadose Zone Soil	GRAAEVEAMLGRVPADADAEYLAGAGRVAMLVKRNDLARTLFTRAPERDPSSYRAALGVASIFLLQRDFDSASRAFDAARNRTHDKDEQRFLSAAIGDLATIRVR*
Ga0137419_102009622	3300012925	Vadose Zone Soil	SNEAQALLATVGEDADAEYLAGAGRVAVVARRQDLAKALFLRSIERDPSSYRAALGLASIFLWQRDFDSASRAFDAARSRTHDKDEQRFLSAAIGDLATIKVR*
Ga0137416_100082671	3300012927	Vadose Zone Soil	ERHGNLLADALGAARAGQSNEAQALLATVGEDADAEYLAGAGRVAVVARRQDLAKALFLRSIERDPSSYRAALGLASIFLWQRDFDSASRAFDAARSRTHDKDEQRFLSAAIGDLATIKVR*
Ga0126375_102829151	3300012948	Tropical Forest Soil	AGRVALLARETGMARTYFTRALERDPASYRAALGVATVVLLQRDFDLASRAFDAARSRTRDKDEQKFLSYAIGDLATIKVR*
Ga0164298_104867012	3300012955	Soil	AAARDGHDADAEALLVKVPDDADADYLAAGGRIALTAHRPDLARALFTRALEQDPSSYRAALGVASAFLLGRDFDSASRAFDAARSRTHDKDEQKFLTYAIGDLATIRVR*
Ga0126369_101417121	3300012971	Tropical Forest Soil	ALLVKMPESADAEYLAAAGRVALIAHRQDAARALFTRALERDPSSFRGALGIASTFLLQRDFDSASRAFDAARNRTRDKDEQKFLSFAIGDLATIRVR*
Ga0164306_110323031	3300012988	Soil	LDDRLQAAAAARDGNIEAVRTALSVIPEDPHSDYLAGAGRIAMVVRDMTLARTLFLRALDRDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKCLTFAI
Ga0164305_102678162	3300012989	Soil	DADYLAAAGRIALTAHRPDLARALFTRALERDPSSYRAALGVASAFLLGRDFDSASRAFDAARSRTHDKDEQKFLTYAIGDLATIRVR*
Ga0157370_108498032	3300013104	Corn Rhizosphere	MRTDFLAGAGRVAMLARDTPLARALFLRALDRDPSSYRAALGVASTLLLQRDFDHASRAFDATRRRTHDKDEQKFLTFAIGDLATIKIR*
Ga0157369_106861142	3300013105	Corn Rhizosphere	AALEAARDGRGSEVRTLLSRVAEDADADYLSGAGRIAMLARDTPLARTLFLRALERDPASYRAAMGVASTLLIQRDFDNASRAFDAARSRTHDKDEQKFLTFAVGDLATIKAR*
Ga0157378_127802811	3300013297	Miscanthus Rhizosphere	DADAEYLTGSGNVAMLARDAALARALYQRALERDSSSYRAALGVASVFLLQRDFDSASRAFDAARNRTHDKDEQKFLTAAIGDLATIRVR*
Ga0157375_129648692	3300013308	Miscanthus Rhizosphere	RAAAAARDGNADAVRAALRVIPEDPGSDFLAGAARVAMVAREMPLARTLFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSMAIGDLATIKVR*
Ga0137412_105538901	3300015242	Vadose Zone Soil	LNAVCSNPEVVKFRRGDPVPAAALRLIPDTVDADFLAGGGRIAILAGDRALAKTLFTSALGVDPSSYRAALGVASVFVLERDFDSASRAFDAARSRTHDKDEQKFLS
Ga0132257_1044327382	3300015373	Arabidopsis Rhizosphere	SGKAADVRSALQQMPTESRADYMAAAGRVALLARDLSLAQTLFRRALELDRTSYRAAMGVASIFMLERDFDSASRAFDAARNRTHDKDEVKFLTAAIGDLATIKVR*
Ga0132255_1025740301	3300015374	Arabidopsis Rhizosphere	GELLTQAASAPRDARADEVRSALQGIPEDPDAEYLAGAGRVAILARELPLAKALFLRAIERDPSSYRATLGIASIFLLERDFDSASRAFDAARTRTHDKDEQKFINAALGDLATIKVR*
Ga0132255_1062168631	3300015374	Arabidopsis Rhizosphere	GRVPEEANADYLAAAGRVALLARETGMARTYFTRALERDPSSYRAALGVATVVLLQRDFDLASRAFDAARSRTRDKDEQKFLSYAIADLATIKIR*
Ga0182041_103570371	3300016294	Soil	RDGKAEEIRSALQNIPEDPDAEYLAGAGRVAILAREMPLAKALFLRAIERDPSSYRASLGIASIFLLERDFDSASRAFDAARSRTHDKDEQKFLSAALGDLATIKVR
Ga0182041_116618382	3300016294	Soil	VPLPAHDRGRQMLLDALEAARASNAAQVRTLLERVSSDADADYLAGAGRIALMARDTDLARTLFVRALEIDPSSYRAALGIASTFLLARDFDSASRVFDAARNRTHDKDEIRFLTIALGDLATIKVR
Ga0182040_105068752	3300016387	Soil	MLLDALEAARASNAAQVRTLLERVSSDADADYLAGAGRIALMARDTDLARTLFVRALEIDPSSYRAPLGIASTFLLARDFDSASRVFDAARNRTHDKDEIRFLTIALGDLATIKVR
Ga0184604_103526341	3300018000	Groundwater Sediment	AENRSGRVLVDAAAAVRAGQPTEAAALLGRVPDDADGDYLAAAGRVALLARQYDMARTFFMRALERDPSSYRAALGIASTFLLRRDFDNASRAFDAARARTRDKDEQRFISAAIGDLATIRYSR
Ga0193712_10955711	3300019880	Soil	IEASDDVSGRLLSETLEAARAGKADVVRTALSQIPADPASDFLAGAGRVALVARDLALAQTLFKRALERDPASYRAALGIASMFLLQRDFDSASRAFDATRSRTHDKDEQKFLSAAIGDLATIKFR
Ga0193727_11125371	3300019886	Soil	MPDDADADYFAAAGRIAMVARDTGLAKTLFTRALERDPSSYRAALGVASIFVLERDFDSASRAFDAARSRTHDKDEQKFLSAAIGDLATIKVR
Ga0206356_117382342	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	DADADFLAGAGRVAMLARDTPLARALFLRALDRDPSSYRAALGVASTLLLQRDFDHASRAFDATRRRTHDKDEQKFLTFAIGDLATIKIR
Ga0210382_102721312	3300021080	Groundwater Sediment	QAPDDVSGRLLGEALEAARAGKADVVRAALSQIPADPTGDFLAGAGRVALVARDMALAQTLFKRALERDPSSYRAALGIATGFLLQRDFDSASRAFDATRNRTHDKDEQKFLSAAIGDLATIKVR
Ga0210382_102932121	3300021080	Groundwater Sediment	PAENRQGRVLVDAAAAARGGQAAEATALLGRVPDDADGDYLAAAGRVALLARQYDLARTFFMRALERDPSSYRAALGIASMFLLRRDFDNASRAFDAARSRTRDKDEQRFISAAIGDLATLRYNR
Ga0210384_104084732	3300021432	Soil	EVTEAARGGKANVVRSAFERLPEDPDGDFLAGAGRVAIVARDMPLAQALFKRALERDPSSYRAALGIASMFLLQRDFDGASRAFDATRNRTHDKDEQKFLTAAIGDLATIKTR
Ga0247752_10605991	3300023071	Soil	DDNAKFLIESAQAARDGNAEAVRASLQQLPADADAEYLAGAGRVAIVARDFVLARSLFARAIERDRMSYRATLGLASTFLFDRDFDSASRAFDAARNRTKDKEEQRFISAAIGDLATIKV
Ga0179589_105734681	3300024288	Vadose Zone Soil	SNDVKGELLTQAAAAARDAHPDQARTALQIMPDDADADFMAGAGRIALVARDLPLAKTLFMKALERDPSSYRAALGMASLFVLERDFDSASRTFDAARNRTHDKDEQKFLSAAIGDLATIKVR
Ga0207680_112698681	3300025903	Switchgrass Rhizosphere	EARAALHQLPDEPDADFLAGAGRIALVARDPALAKTLFTQALGIDPSSYRAAMGVASIFMLERDFDSASRAFDAARNRTHDKDEVKFLTAAIGDLATIKVR
Ga0207705_100405761	3300025909	Corn Rhizosphere	LEAARDGRGSEVRTLLSRVAEDADADYLSGAGRIAMLARDTALARTLFLRALERDPASYRAAMGVASTLLIQRDFDNASRAFDAARSRTHDKDEQKFLTFAVGDLATIKAR
Ga0207652_115257281	3300025921	Corn Rhizosphere	PRGDAAATLGEALDAARGGRADEVRAILARVPDDADADFLAGAGRVAMLARDTPLARALFLRALDRDPSSYRAALGVASTLLLQRDFDHASRAFDATRRRTHDKDEQKFLTFAIGDLATIKIR
Ga0207694_102414021	3300025924	Corn Rhizosphere	QVRTLLTRVSDGADADYLAGAGRIAMLARDTALARTLFLRALERDPASYRASLGVASTLLLQRDFDNASRAFDAARNRTHDKDEQKFLTFAIGDLATIKSR
Ga0207659_110606772	3300025926	Miscanthus Rhizosphere	PHADFLAGAGRIAMVARDMALARTLFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSMAIGDLATIKVR
Ga0207687_110528912	3300025927	Miscanthus Rhizosphere	MGVELSAGARHPRREPEDADADYLGAAGRVAMVARRQDLAKALFLRSLERDPSSYRAALGIASIFLWQRDFDSASRAFDAARSRTHDKDEQRFISAAIGDLATIKVR
Ga0207687_118939121	3300025927	Miscanthus Rhizosphere	ARAALHQLPDEPDADFLAGAGRIALVARDPALAKTLFTQALGIDPSSYRAAMGVASIFMLERDFDSASRAFDAARNRTHDKDEVKFLTAAIGDLATIKVR
Ga0207709_111809401	3300025935	Miscanthus Rhizosphere	SDERHGAILADALGAARAGQPNEAQALLAKVPEDADADYLGAAGRVAMVARRQDLAKALFLRSLERDPSSYRAALGIASIFLWQRDFDSASRAFDAARSRTHDKDEQRFISAAIGDLATIKVR
Ga0207704_110955641	3300025938	Miscanthus Rhizosphere	AGRIAMVARDMSLARALFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSMAIGDLATIKVR
Ga0207691_101903573	3300025940	Miscanthus Rhizosphere	DPHSDFLAGAGRIAMVARDMSLARALFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSMAIGDLATIKVR
Ga0207711_106929581	3300025941	Switchgrass Rhizosphere	LRSIPEDPTSDFLAGAGRIAMVARDMALARTLFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSVAIGDLATIKVR
Ga0207661_111314351	3300025944	Corn Rhizosphere	IPEDPHADYLAAAGRIAMVARDMPLARALFLRALERDPSSYRAALGIASMFLIERDFDSASRAFDAARNRTHDKDEQKFLTIAIGDLQTIKVR
Ga0207651_102242972	3300025960	Switchgrass Rhizosphere	APLLSAAAAARDGHDADSEALLVKVPDDADADYLAAGGRIALVAHRPDLARALFSRALERDPSSYRAALGVASAFLLGRDFDSASRAFDAARNRTHDKDEQKFLTYAIGDLATIRVR
Ga0207658_110774182	3300025986	Switchgrass Rhizosphere	MPDDADADYFAAAGRIAMVARDPGLAKTLFTRALERDPSSYRAALGVASIFVLERDFDSASRAFDAARSRTHDKDEQKFLSAAIGDLATIKVR
Ga0207639_111058001	3300026041	Corn Rhizosphere	SGAGRIAMLARDTALARTLFLRALERDPASYRAAMGVASTLLIQRDFDNASRAFDAARSRTHDKDEQKFLTFAVGDLATIKAR
Ga0207674_106063911	3300026116	Corn Rhizosphere	ARDGNADAVRAALTAIPEDPHADYLAAAGRIAMVARDMPLARALFLRALERDPSSYRAALGIASMFLIERDFDSASRAFDAARNRTHDKDEQKFLTIAIGDLQTIKVR
Ga0209903_10205612	3300026216	Soil	GNADQVRAALQTIPENPDAEFFAGAGRIAIVARDMGLARTLFTKALERDPSSYRAALGVASTFVIQRDFDSASRAFDAARNRTHDKDEQKFLSVAIGDLATIVVR
Ga0209848_10106603	3300026221	Permafrost Soil	RDGNADQVRAALQTIPENPDAEFFAGAGRIAIVARDMGLARTLFTKALERDPSSYRAALGVASTFVIQRDFDSASRAFDAARNRTHDKDEQKFLSVAIGDLATIVVR
Ga0209027_10742342	3300026300	Grasslands Soil	LWSQTRVPDDGDADYFGAAGRVALVAHRPEVARVLFTRALERDPASYRAALGVASVFLLQRDFDSASRAFDAARSRTRDKDEQKFLSYAIADLATIRVR
Ga0209488_108420401	3300027903	Vadose Zone Soil	HGPDDVSGRLLSEAQEAARAGKADVVRTALSQIPADPTADFLAGAGRVALVARDTALAQTLFKRALERDPSSYRAALGIASTFLLQRDFDSASRAFDATRNRTHDKDEQKFLSAAIGDLATIKVR
Ga0268264_124309152	3300028381	Switchgrass Rhizosphere	TALRSIPEDPTSDFLAGAGRIAMVARDMALARTLFLRALERDPSSYRAALGIASMFLLERDFDSASRAFDAARSRTHDKDEQKFLSVAIGDLATIKVR
Ga0307282_103112342	3300028784	Soil	RQGRVLVDAAAAARAGQPAEVTALLGRVPDDADGDYLAAAGRVALVARQYDIARTLFTRALERDPSSYRAALGIASMFLLRRDFDNASRAFDAARSRTRDKDEQRFISAAIGDLATIRYN
Ga0307503_107766161	3300028802	Soil	EEVRLALERLPPDPTADYLASAARIAMVAREMPLARNLFMRALERDPSSYRAALGVASMFLLQRDFDSASRAFDAARSRTHDKDEQRFLSAAIGDLATIRYR
Ga0307277_105400471	3300028881	Soil	PVRAADDARGAVLNEVAAAAREGKADRVRAALQLLPDDADADYLAGAGRIAMVAGDMELARTLFVRALERDPSSYRAALGVASMFLLQRDFDSASRAFDAARSRTHDKDEQRFLSAAIGDLATIRVR
Ga0307304_105909182	3300028885	Soil	PTGDYLAGAGRVALVARDMALAQTLFKRALERDPSSYRAALGIASGFLLQRDFDSASRAFDATRNRTHDKDEQKFLSAAIGDLATIKVR
Ga0170824_1138427251	3300031231	Forest Soil	RGELLTQAAAAARDGKADEVRSALQNIPEDPDAEYLAGAGRVAILAREMPLAKALFLRAIERDPSSYRATLGIASIFLLERDFDSASRAFDAARSRTHDKDEQIFLSAALSDLATIKVR
Ga0307469_103719201	3300031720	Hardwood Forest Soil	AAGRIALVAHRQDAAFALFMRALERDPSSFRAALGIASVFMLRRDFDSASRTFDAARNRTHDKDEQKYISYAITDLATIRVR
Ga0306918_108390822	3300031744	Soil	VQAGVALNWQLVLKPVPLPAHDRGRQMLLDALEAARASNAAQVRTLLERVSSDADADYLAGAGRIALMARDTDLARTLFVRALEIDPSSYRAALGIASTFLLARDFDSASRVFDAARNRTHDKDEIRFLTIALGDLATIKVR
Ga0318529_102899581	3300031792	Soil	NIPEDPDAEYLAGAGRVAILAREMPLAKALFLRAIERDPSSYRASLGIASIFLLERDFDSASRAFDAARSRTHDKDEQKFLSAALGDLATIKVR
Ga0307473_111380541	3300031820	Hardwood Forest Soil	AKMLLGRVPDEANADYLAAAGRVALLARETGMARTYFTRALERDPSSYRAALGVASVVLLQRDFDLASRAFDAARSRTRDKDEQKFLSYAIGDLATIKIR
Ga0318551_104320181	3300031896	Soil	QMLLDALEAARASNAAQVRTLLERVSSDADADYLAGAGRIALMARDTDLARTLFVRALEIDPSSYRAALGIASTFLLARDFDSASRVFDAARNRTHDKDEIRFLPIALGDRATIKVR
Ga0310916_101649572	3300031942	Soil	AAAAAREGKAEEIRSALQNIPEDPDAEYLAGAGRVAILAREMPLAKALFLRAIERDPSSYRASLGIASIFLLERDFDSASRAFDAARSRTHDKDEQKFLSAALGDLATIKVR
Ga0318530_102242381	3300031959	Soil	EEIRSALQNIPEDPDAEYLAGAGRVAILAREMPLAKALFLRAIERDPSSYRASLGIASIFLLERDFDSASRAFDAARSRTHDKDEQKFLSAALGDLATIKVR
Ga0308176_117126292	3300031996	Soil	LTVIPDDPHADYLASAGRIAMVARDMPLARALFLRALERDPSSYRAALGIASMFLVERDFDSASRAFDAARNRTHDKDEQKFLTIAIGDLQTIKVR
Ga0310895_107277352	3300032122	Soil	VRTSLQQLPADADADYLAGAGRVAIVARDFSLARSLFARAVERDRMSYRATLGLASTFLFDRDFDSASRAFDAARNRTKDKEEQRFISAAIADLATIKVR
Ga0307471_1003334622	3300032180	Hardwood Forest Soil	ADAEYLAGAGRIAVLARRQDLAKALFLRSIERDPSSYRAALGLASIFLWQRDFDSASRAFDAARSRTHDKDEQRFLSAAIGDLATIKVR
Ga0307472_1024063312	3300032205	Hardwood Forest Soil	EDAKMLLGRVPEEANADYLAASGRVALLARETGMARTYFTRALERDPSSYRAALGVATVVLLQRDFDLASRAFDAARSRTRDKDEQKFLSYAIADLATIKIR
Ga0310810_109773132	3300033412	Soil	SAVLTRLPEAMNADYLAAAGRVALLARNVDLARSYFARALEEDHSSYRAALGVGSVSVILRDFDMASRAFDAARSRTHDKNEERFLSAALGDLATIKVR
Ga0326726_101370691	3300033433	Peat Soil	DDARGTMLMEAVNVARDKQVEKVREILSRVPDDADADFLAAAGRIALVARDTDLARPLFMRALETDPSSYRAALGVASLFLLQRDFDSASRAFDATRNRTHDKDEQKFLTAAIGDLATIKIR
Ga0326726_117489751	3300033433	Peat Soil	DDARGTMLMEAVNVARDKQVEKVREILSRVPDDADADFLAAAGRIALVARDTDLARPLFMRALETDPSSYRAALGVASLFLLQRDFDSASRAFDATRNRTHDKDEQKFLTAAIGDLATIKVR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088974

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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