Metagenome / Metatranscriptome Family F088943

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088943
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	104 residues
Representative Sequence	MRGLSQSVWAHEDHLVAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV
Number of Associated Samples	70
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.49 %
% of genes near scaffold ends (potentially truncated)	37.61 %
% of genes from short scaffolds (< 2000 bps)	77.06 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (88.991 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (21.101 % of family members)
Environment Ontology (ENVO)	Unclassified (85.321 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (30.275 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.81% β-sheet: 11.19% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF12728	HTH_17	18.35
PF08401	ArdcN	0.92
PF13360	PQQ_2	0.92
PF10102	DUF2341	0.92
PF13453	zf-TFIIB	0.92
PF05869	Dam	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.99 %
All Organisms	root	All Organisms	11.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.99 %
cellular organisms	root	All Organisms → cellular organisms	11.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.99 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.34 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.50 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	3.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3.67 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	2.75 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.92 %
Tenericutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.99 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	3.67 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	2.75 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.92 %
unclassified Mycoplasmatota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → unclassified Mycoplasmatota	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.99 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3.67 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2.75 %
Tenericutes bacterium ADurb.Bin024	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → unclassified Mycoplasmatota → Tenericutes bacterium ADurb.Bin024	0.92 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.99 %
unclassified Methanomicrobiales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales	2.75 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	2.75 %
unclassified Microgenomates group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group	0.92 %
unclassified Eubacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales	0.92 %
Tenericutes bacterium ADurb.Bin024	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → unclassified Mycoplasmatota → Tenericutes bacterium ADurb.Bin024	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.99 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	2.75 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	2.75 %
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	0.92 %
Microgenomates group bacterium ADurb.Bin238	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group → Microgenomates group bacterium ADurb.Bin238	0.92 %
Tenericutes bacterium ADurb.Bin024	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → unclassified Mycoplasmatota → Tenericutes bacterium ADurb.Bin024	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.99 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	2.75 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	2.75 %
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	0.92 %
Microgenomates group bacterium ADurb.Bin238	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group → Microgenomates group bacterium ADurb.Bin238	0.92 %
Tenericutes bacterium ADurb.Bin024	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → unclassified Mycoplasmatota → Tenericutes bacterium ADurb.Bin024	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111016\|draft_c316338	Not Available	508	Open in IMG/M
2209111016\|draft_c85895	Not Available	500	Open in IMG/M
2209111018\|Meso_c1193325	Not Available	503	Open in IMG/M
2209111018\|Meso_c1295760	Not Available	513	Open in IMG/M
2209111018\|Meso_c334776	Not Available	507	Open in IMG/M
2209111018\|Meso_c371793	Not Available	505	Open in IMG/M
2209111018\|Meso_c396042	Not Available	514	Open in IMG/M
3300001975\|Draft_10180117	Not Available	534	Open in IMG/M
3300001975\|Draft_10267663	Not Available	510	Open in IMG/M
3300001975\|Draft_10349913	Not Available	502	Open in IMG/M
3300001975\|Draft_10371793	Not Available	509	Open in IMG/M
3300001975\|Draft_10827315	Not Available	512	Open in IMG/M
3300001975\|Draft_10880274	Not Available	509	Open in IMG/M
3300001975\|Draft_11076953	Not Available	523	Open in IMG/M
3300001975\|Draft_11193325	Not Available	507	Open in IMG/M
3300001975\|Draft_11295760	Not Available	517	Open in IMG/M
3300002163\|JGI24707J26582_10026780	All Organisms → cellular organisms → Bacteria → Proteobacteria	2554	Open in IMG/M
3300002164\|JGI24708J26588_10021093	Not Available	3078	Open in IMG/M
3300002164\|JGI24708J26588_10095506	Not Available	904	Open in IMG/M
3300002167\|JGI24714J26587_10056832	Not Available	968	Open in IMG/M
3300002167\|JGI24714J26587_10072144	Not Available	784	Open in IMG/M
3300002168\|JGI24712J26585_10085757	Not Available	1117	Open in IMG/M
3300002168\|JGI24712J26585_10209780	Not Available	536	Open in IMG/M
3300002173\|JGI24709J26583_10093747	Not Available	992	Open in IMG/M
3300002406\|JGI24499J29688_1030966	Not Available	686	Open in IMG/M
3300002837\|bg3kmer60_1009293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	3359	Open in IMG/M
3300003306\|Ga0004534J46558_1003723	Not Available	12535	Open in IMG/M
3300003306\|Ga0004534J46558_1029078	Not Available	779	Open in IMG/M
3300003667\|LSCM3L_1008322	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → unclassified Microgenomates group → Microgenomates group bacterium ADurb.Bin238	2389	Open in IMG/M
3300006037\|Ga0075465_10018242	Not Available	1366	Open in IMG/M
3300006389\|Ga0079064_1379803	Not Available	667	Open in IMG/M
3300006473\|Ga0100239_118399	Not Available	1419	Open in IMG/M
3300006483\|Ga0100240_115226	Not Available	2726	Open in IMG/M
3300006801\|Ga0079223_10067029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Tenericutes → unclassified Mycoplasmatota → Tenericutes bacterium ADurb.Bin024	2279	Open in IMG/M
3300006801\|Ga0079223_10697156	Not Available	643	Open in IMG/M
3300006805\|Ga0075464_10024217	Not Available	3172	Open in IMG/M
3300009095\|Ga0079224_103032485	Not Available	670	Open in IMG/M
3300009095\|Ga0079224_104726621	Not Available	531	Open in IMG/M
3300009360\|Ga0118672_1015317	Not Available	2555	Open in IMG/M
3300009607\|Ga0123327_1099611	Not Available	1050	Open in IMG/M
3300009647\|Ga0123326_1084246	Not Available	1090	Open in IMG/M
3300009652\|Ga0123330_1141641	Not Available	885	Open in IMG/M
3300009652\|Ga0123330_1286859	Not Available	561	Open in IMG/M
3300009656\|Ga0123329_1033603	Not Available	2487	Open in IMG/M
3300009668\|Ga0116180_1281381	Not Available	625	Open in IMG/M
3300009675\|Ga0116149_1203370	Not Available	906	Open in IMG/M
3300009680\|Ga0123335_1453908	Not Available	581	Open in IMG/M
3300009685\|Ga0116142_10448137	Not Available	617	Open in IMG/M
3300009687\|Ga0116144_10612844	Not Available	528	Open in IMG/M
3300009693\|Ga0116141_10292920	Not Available	862	Open in IMG/M
3300009707\|Ga0116195_1050963	Not Available	989	Open in IMG/M
3300009715\|Ga0116160_1196200	Not Available	794	Open in IMG/M
3300009767\|Ga0116161_1151409	Not Available	1039	Open in IMG/M
3300009780\|Ga0116156_10589749	Not Available	518	Open in IMG/M
3300009783\|Ga0116158_10207325	Not Available	1143	Open in IMG/M
3300010340\|Ga0116250_10156035	Not Available	1437	Open in IMG/M
3300010344\|Ga0116243_10086332	Not Available	2392	Open in IMG/M
3300010346\|Ga0116239_10265667	Not Available	1224	Open in IMG/M
3300010355\|Ga0116242_10040283	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	5687	Open in IMG/M
3300010355\|Ga0116242_10482484	Not Available	1138	Open in IMG/M
3300010356\|Ga0116237_10273153	Not Available	1550	Open in IMG/M
3300010356\|Ga0116237_10341259	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1348	Open in IMG/M
3300014203\|Ga0172378_10318829	Not Available	1192	Open in IMG/M
3300014203\|Ga0172378_10319984	Not Available	1190	Open in IMG/M
3300014204\|Ga0172381_10096614	Not Available	2456	Open in IMG/M
3300014204\|Ga0172381_10623925	Not Available	822	Open in IMG/M
3300014205\|Ga0172380_10093485	Not Available	2447	Open in IMG/M
3300014205\|Ga0172380_10191305	Not Available	1604	Open in IMG/M
3300014205\|Ga0172380_10853334	Not Available	650	Open in IMG/M
3300014206\|Ga0172377_10313382	Not Available	1325	Open in IMG/M
3300014206\|Ga0172377_10712265	Not Available	795	Open in IMG/M
3300014206\|Ga0172377_11049241	Not Available	626	Open in IMG/M
3300014206\|Ga0172377_11367841	Not Available	533	Open in IMG/M
3300015214\|Ga0172382_10251179	Not Available	1424	Open in IMG/M
3300015214\|Ga0172382_10265324	Not Available	1371	Open in IMG/M
3300015214\|Ga0172382_11157663	Not Available	503	Open in IMG/M
3300025393\|Ga0208041_1015770	Not Available	1642	Open in IMG/M
3300025713\|Ga0208195_1036954	Not Available	2199	Open in IMG/M
3300025714\|Ga0208458_1037656	Not Available	2011	Open in IMG/M
3300025859\|Ga0209096_1105574	Not Available	1153	Open in IMG/M
3300025871\|Ga0209311_1054192	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1932	Open in IMG/M
3300026194\|Ga0209509_1005623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	6379	Open in IMG/M
3300026195\|Ga0209312_1006380	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6001	Open in IMG/M
3300026198\|Ga0209313_1028025	Not Available	1555	Open in IMG/M
3300026290\|Ga0209510_1160837	Not Available	737	Open in IMG/M
3300027510\|Ga0209537_1045367	Not Available	1435	Open in IMG/M
3300027711\|Ga0209075_1015811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	4798	Open in IMG/M
3300027711\|Ga0209075_1181846	Not Available	868	Open in IMG/M
3300027711\|Ga0209075_1258060	Not Available	686	Open in IMG/M
(restricted) 3300028568\|Ga0255345_1141940	Not Available	1054	Open in IMG/M
3300028601\|Ga0265295_1146852	Not Available	1041	Open in IMG/M
3300028602\|Ga0265294_10047548	Not Available	3874	Open in IMG/M
3300028602\|Ga0265294_10147229	Not Available	1782	Open in IMG/M
3300028602\|Ga0265294_10200648	Not Available	1433	Open in IMG/M
3300028602\|Ga0265294_10295903	Not Available	1082	Open in IMG/M
3300028603\|Ga0265293_10052291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	3741	Open in IMG/M
3300028603\|Ga0265293_10071323	Not Available	2968	Open in IMG/M
3300028603\|Ga0265293_10519014	Not Available	681	Open in IMG/M
3300028603\|Ga0265293_10715450	Not Available	534	Open in IMG/M
3300028627\|Ga0302243_1060277	Not Available	808	Open in IMG/M
3300028628\|Ga0302249_1045630	Not Available	1070	Open in IMG/M
3300028629\|Ga0302248_1077103	Not Available	720	Open in IMG/M
3300028630\|Ga0302247_1073039	Not Available	776	Open in IMG/M
3300028644\|Ga0302238_1071648	Not Available	936	Open in IMG/M
3300029311\|Ga0167331_1025190	Not Available	1495	Open in IMG/M
3300029440\|Ga0167329_1012165	Not Available	2391	Open in IMG/M
3300029781\|Ga0167330_1022935	Not Available	1210	Open in IMG/M
3300029822\|Ga0134854_1001213	All Organisms → cellular organisms → Archaea → Euryarchaeota	26716	Open in IMG/M
3300029825\|Ga0134835_1001347	Not Available	28443	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	85.32%
Environmental	Environmental	14.68%

Habitat	Taxonomy	Distribution
Solid Waste	Engineered → Solid Waste	32.11%
Wastewater	Engineered → Wastewater	29.36%
Biotransformation	Engineered → Biotransformation	11.93%
Bioreactor	Engineered → Bioreactor	11.01%
Aquatic	Environmental → Aquatic	8.26%
Terrestrial	Environmental → Terrestrial	6.42%
Built Environment	Engineered → Built Environment	0.92%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	26.61%
Landfill	Engineered → Solid Waste → Landfill	23.85%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	11.01%
Anaerobic	Engineered → Bioreactor → Anaerobic	9.17%
Freshwater	Environmental → Aquatic → Freshwater	6.42%
Soil	Environmental → Terrestrial → Soil	6.42%
Grass	Engineered → Solid Waste → Grass	6.42%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	2.75%
Marine	Environmental → Aquatic → Marine	1.83%
Animal Waste	Engineered → Solid Waste → Animal Waste	1.83%
Unclassified	Engineered → Bioreactor → Unclassified	1.83%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	0.92%
Unclassified	Engineered → Biotransformation → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	26.61%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	23.85%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	11.01%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	9.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	6.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	6.42%
Composting	Engineered → Solid Waste → Grass → Composting	6.42%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	2.75%
Coastal	Environmental → Aquatic → Marine → Coastal	1.83%
Unclassified	Engineered → Solid Waste → Animal Waste → Unclassified	1.83%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	1.83%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	0.92%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	26.61%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	23.85%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	11.01%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	9.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.42%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	6.42%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	5.50%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.83%
Unclassified	Engineered → Solid Waste → Animal Waste → Unclassified → Unclassified	1.83%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	1.83%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water	0.92%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	0.92%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	21.10%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	15.60%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	11.01%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	9.17%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	6.42%
Solid Waste From Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor	6.42%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	5.50%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	4.59%
Biosolids	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids	2.75%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.83%
Manure	Engineered → Solid Waste → Animal Waste → Unclassified → Unclassified → Manure	1.83%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	1.83%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water → Coalbed Water	0.92%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	0.92%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	0.92%
Biogas Reactor	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified → Biogas Reactor	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111016	Thermophilic bioreactor microbial communities at WVSU, USA	Engineered	Open in IMG/M
2209111018	Mesophilic bioreactor microbial communities at Bielefeld, Germany	Engineered	Open in IMG/M
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002164	Biogas fermentation microbial communities from Germany - Plant 1 DNA2	Engineered	Open in IMG/M
3300002167	Biogas fermentation microbial communities from Germany - Plant 4 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002406	Biogas fermentation microbial communities from Germany - Plant 1 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002837	Biogas reactor microbial communities from SLU, Sweden, that are enriched on cellulose - Sample No3 60kmer	Engineered	Open in IMG/M
3300003306	Biogas fermentation microbial communities from Germany - Plant 1 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300003667	Lithgow State Coal Mine Metagenomic Study (LSCM 3 Late (Sample 2))	Environmental	Open in IMG/M
3300006037	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA	Environmental	Open in IMG/M
3300006389	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gel_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006473	Microbial communities from pig manure storage tank from Sherbrooke, QC, Canada, enriched culture C1	Engineered	Open in IMG/M
3300006483	Microbial communities from pig manure storage tank from Sherbrooke, QC, Canada, enriched culture C4	Engineered	Open in IMG/M
3300006801	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009360	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.B IBDA	Engineered	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009652	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNA	Engineered	Open in IMG/M
3300009656	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009675	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009685	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG	Engineered	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300009707	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009767	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS3_MetaG	Engineered	Open in IMG/M
3300009780	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG	Engineered	Open in IMG/M
3300009783	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC052_MetaG	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010344	AD_JPASca	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300010355	AD_USDVca	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300025393	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025714	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025859	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025871	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026194	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026195	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026198	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026290	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300027711	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011 (SPAdes)	Environmental	Open in IMG/M
3300028568 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant20	Engineered	Open in IMG/M
3300028601	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Methane capture system biofilm	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300028627	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Met	Engineered	Open in IMG/M
3300028628	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Val	Engineered	Open in IMG/M
3300028629	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Leu	Engineered	Open in IMG/M
3300028630	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Ile	Engineered	Open in IMG/M
3300028644	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Asn	Engineered	Open in IMG/M
3300029311	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP12 - Kappala-digested 113	Engineered	Open in IMG/M
3300029440	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP10 - Uppsala-digested 111	Engineered	Open in IMG/M
3300029781	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP11 - Uppsala-digested 112	Engineered	Open in IMG/M
3300029822	Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T	Engineered	Open in IMG/M
3300029825	Liquor fermentation pit mud microbial communities from Luzhou, China - Meta-1-2-440-M	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
draft_3163381	2209111016	Solid Waste From Bioreactor	MSGLSQLIWAHEDHLLAIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRRENLANGLTGGSECA
draft_858951	2209111016	Solid Waste From Bioreactor	GLSQLIWAHEDHLLAIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRRENLANGLTGGSECA
Meso_11933251	2209111018	Solid Waste From Bioreactor	MRGLSQSVWAHEDHLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPFKGGSRARSNVWRWHPRAAELCRQAIARDHRWENLANGLTGGSECV
Meso_12957601	2209111018	Solid Waste From Bioreactor	MRGLSQSVIANEDRLVAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIARDHRWENLANGLTGG
Meso_3347761	2209111018	Solid Waste From Bioreactor	MSGLSQSVIANEDRLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIRARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDRRWENL
Meso_3717932	2209111018	Solid Waste From Bioreactor	ARLDDGWQCPVCNWYRGYYEGGAAPMRALSQSVIANEDRLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIPARDAFGVPLKGGSRARSNVWRWHPRAAELCRQAIARDHRWENLANGLTGGSECV
Meso_3960421	2209111018	Solid Waste From Bioreactor	ANEDRLVAIYRRTGDTQFTHSEIADLIPCGTMLRYTVPGIFIHARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDRRWENLANGLTGGSECV
Draft_101801171	3300001975	Biogas Fermenter	SANEDRLVAIYRRTGDTQFTHSEIADLIPCGTMLRYTVPGIFIHARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDRRWETVRNGLTGGSECGMRITGRPSVLTTGPVALLK*
Draft_102676631	3300001975	Biogas Fermenter	SANEDRLVAIYRRTGDTQFTHSEIADLIPCGTMLRYTVPGIFIHARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDRRWENLANGLTGGSECV*
Draft_103499131	3300001975	Biogas Fermenter	MRGLSQSVIANEDRLVAIYRRTGDTQFTHSEIADLIPCGTMLRYTVPGIFIHARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDRRL
Draft_103717932	3300001975	Biogas Fermenter	ARLDDGWQCPVCNWYRGYYEGGAAPMRALSQSVIANEDRLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIPARDAFGVPLKGGSRARSNVWRWHPRAAELCRQAIARDHRWENLANGLTGGSECV*
Draft_108273151	3300001975	Biogas Fermenter	PIPCVPWQSQWQCPVCNWYRGYYEGGAAPMRALSQSVIANEDRLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGAPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV*
Draft_108802741	3300001975	Biogas Fermenter	MSGLSQSVIANEDRLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIRARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDRRWENLA
Draft_110769531	3300001975	Biogas Fermenter	SVANEDRLVAIYRRTGDTQFTHAQIADLVPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDRRWENLAEGLTGGRP*
Draft_111933251	3300001975	Biogas Fermenter	MRGLSQSVWAHEDHLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPFKGGSRARSNVWRWHPRAAELCRQAIARDHRWENLANGLTGGSECV*
Draft_112957601	3300001975	Biogas Fermenter	MRGLSQSVIANEDRLVAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIARDHRWENLANGLTGGL
JGI24707J26582_100267805	3300002163	Biogas Fermentantion	MRGLSQSVWAHEDHLLAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRXXNLAEGLTGGRA*
JGI24708J26588_100210931	3300002164	Biogas Fermentantion	MRGLSQSVWAHEDHLLAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDH
JGI24708J26588_100955062	3300002164	Biogas Fermentantion	MRGLSQSVVANEDHLVAIYRRTGDTSFTYGDIADLIPCGTMLRYTTPGIFIRARDPKGVPLKGGSXARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECI*
JGI24714J26587_100568323	3300002167	Biogas Fermentantion	MSGLPQLVWAHEDHLLAIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRRENLANGLTGGSECA*
JGI24714J26587_100721442	3300002167	Biogas Fermentantion	MSGLSQLVWAHEDHLLAIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRRENLANGLTGGSECA*
JGI24712J26585_100857573	3300002168	Biogas Fermentantion	MRALSQSVIANEDRLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV*
JGI24712J26585_102097801	3300002168	Biogas Fermentantion	MRGLSQSVWAHEDHLLAIYRRTGDTSFTYKEIADLIPCGAMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWCWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
JGI24709J26583_100937473	3300002173	Biogas Fermentantion	MRGLSQSVWAHEDHLVAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV*
JGI24499J29688_10309662	3300002406	Biogas Fermentantion	MRGLSQSVWAHEDHLLAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWQNLAEGLTG
bg3kmer60_10092938	3300002837	Biogas Reactor	MKDFHIWADILTAIYRRTGDRPFTHAKISDILPPGHIIRYVSRGYFLRVRDSDGTLAQGGARNRAAVWRWHPRAADLCRRSIAHQDADHRWENLARGLTGGDRG*
Ga0004534J46558_100372317	3300003306	Biogas Fermentantion	MRGLSQSVVANEDHLVAIYRRTGDTSFTYGDIADLIPCGTMLRYTTPGIFIRARDPKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECI*
Ga0004534J46558_10290782	3300003306	Biogas Fermentantion	MRGLSQSVWAHEDHLLAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWQNLAEGLTGGRA*
LSCM3L_10083227	3300003667	Coalbed Water	MSGLSQLVIANEDHLVAIYRRTGDTSFTHKEIADLIPCGAMLRYTVPGIFIPARDSNGVPLKGGSRARSNVWCWHPRAAELCRQAIARDHRWENLANGLTGGSECV*
Ga0075465_100182423	3300006037	Aqueous	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0079064_13798031	3300006389	Anaerobic Digestor Sludge	VRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV*
Ga0100239_1183991	3300006473	Manure	MRGLSRSVWAHEDHLVAIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFVPARDANGNPLKAGSRSRATVWCWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0100240_1152265	3300006483	Manure	MRGLSQSVIANEDHLVAIYRRTGDTSFTHAQIADLIPCGTMLRYTVLGIFIPARDSKGIPLKSGSRARSNVWCWHPRAAELCRQAIERDHRWENLANGLTGGSECV*
Ga0079223_100670296	3300006801	Agricultural Soil	MRGLSQSVWAHEDHLVAIYRRTGDTSFTHKEIADLIPCGAMLRYTVPGIFIPARDSKGAPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLAN
Ga0079223_106971564	3300006801	Agricultural Soil	MRGLSQSVWAHEDHLLAIYRRTGDTSFTYKEIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAI
Ga0075464_100242172	3300006805	Aqueous	MSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0079224_1030324853	3300009095	Agricultural Soil	MSGLSQSVIANEDHLVAIYRRTGDTSFTHKEIADLIPCGRMLRYTVPGIFIPARDSNGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV*
Ga0079224_1047266212	3300009095	Agricultural Soil	MRGLSQSVIANEDRLVAIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANG
Ga0118672_10153174	3300009360	Anaerobic Wastewater Sludge	MRALSQSVIANEDRLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLAAGLTGGSECA*
Ga0123327_10996111	3300009607	Anaerobic Biogas Reactor	MSGLSQLVWAHEDNLVEIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWCWHPRAAELCRQAIERDHRWENLANGLTGG
Ga0123326_10842464	3300009647	Anaerobic Biogas Reactor	MSGLSQLVWAHEDNLVEIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWCWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0123330_11416411	3300009652	Anaerobic Biogas Reactor	MSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLAAGLTGGSECA*
Ga0123330_12868592	3300009652	Anaerobic Biogas Reactor	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLAEGLTGGSECA*
Ga0123329_10336031	3300009656	Anaerobic Biogas Reactor	MSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIE
Ga0116180_12813812	3300009668	Anaerobic Digestor Sludge	MSGLSQLIWAHEDHLLAIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGVPLRGGSRARSNVWRWHPRAAELCRQAIERDHRRENLANGLTGGSECA*
Ga0116149_12033704	3300009675	Anaerobic Digestor Sludge	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0123335_14539082	3300009680	Anaerobic Biogas Reactor	MSSGASQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0116142_104481373	3300009685	Anaerobic Digestor Sludge	MSSGLSQLVWAHEDNLVEIYRRTGDTSFTHAQIADPIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLA
Ga0116144_106128441	3300009687	Anaerobic Digestor Sludge	LVEIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLAAGLMGEGSA*
Ga0116141_102929202	3300009693	Anaerobic Digestor Sludge	RVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV*
Ga0116195_10509631	3300009707	Anaerobic Digestor Sludge	MSGLSQSVWAHEDHLLAIYRRTGDASFTYKEIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0116160_11962001	3300009715	Anaerobic Digestor Sludge	MWAHEDHLLAIYRRTGDTSFTHKEIADLIPCGAMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGL
Ga0116161_11514091	3300009767	Anaerobic Digestor Sludge	MWAHEDHLLAIYRRTGDTSFTYKEIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLAN
Ga0116156_105897491	3300009780	Anaerobic Digestor Sludge	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV*
Ga0116158_102073252	3300009783	Anaerobic Digestor Sludge	MSGLSQSVIANEDHLVAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLAAGLTGGSECA*
Ga0116250_101560352	3300010340	Anaerobic Digestor Sludge	MSGLSQLIWAHEDHLLAIYRRTGDTSFTYGDIADLIPCGTMLRYTTPGIFIPARDSKGVPLRGGSRARSNVWRWHPRAAELCRQAIERDHRRENLANGLTGGSECA*
Ga0116243_100863321	3300010344	Anaerobic Digestor Sludge	MWAHEDHLLAIYRRTGDTSFTYKEIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0116239_102656671	3300010346	Anaerobic Digestor Sludge	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRASVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0116242_100402839	3300010355	Anaerobic Digestor Sludge	MSSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLAAGLMGEGSA*
Ga0116242_104824842	3300010355	Anaerobic Digestor Sludge	MSGLSQSVIANEDHLVAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIDRDRRWENLANGLTGGSECA*
Ga0116237_102731532	3300010356	Anaerobic Digestor Sludge	MSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTAPGIFLLARDQNGAPIKGGSRGRASVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0116237_103412591	3300010356	Anaerobic Digestor Sludge	HEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLAAGLMGEGSA*
Ga0172378_103188291	3300014203	Groundwater	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRGAMVRYTAPGIFLLARDQNGAPIKGGSRGRASVWRWHPRAAELCRQAIERDHRWENLAAGLTGGSECA*
Ga0172378_103199844	3300014203	Groundwater	MSGLPQSVLANEDHLITIYRRTGDTPFTYGDIADLIPCGAMLRYTTPGIFLPARDSKGVPSKGGSRARSSVWRWHPRAAELCRRAIERDHRWENLAAGLTGGQECV*
Ga0172381_100966141	3300014204	Landfill Leachate	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRGAMVRYTAPGIFLLARDQNGAPIKGGSRGRASVWRWHPRAAELCRQAIE
Ga0172381_106239252	3300014204	Landfill Leachate	MRGLSQSVWAHEDQLISIYRRTGDAQFTHSEIADLIPHGAMLRYTTPGIFLPARDQKGAPLKGGSRARATVWRWHPDAAELCRRAIERDHRWENLAAGLTGGSECA*
Ga0172380_100934851	3300014205	Landfill Leachate	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRGAMVRYTAPGIFLLARDQNGAPIKGGSRGRASVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA*
Ga0172380_101913051	3300014205	Landfill Leachate	GAAPMSGLPQSVLANEDHLITIYRRTGDTPFTYGDIADLIPRGVMLRYTVPGIFMPARDAKGNPIKAGSRSRATVWRWHPRAAELCRRAIERDHRWENLAAGLTGGSECA*
Ga0172380_108533342	3300014205	Landfill Leachate	MRGLSQSVWAHEGHLVEIYRRTGDTSFTHAQIADLISRGAMLRYTTPGIFFPARDLNGAPLKGGSRARSTIWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV*
Ga0172377_103133821	3300014206	Landfill Leachate	MSGLSQSVIANEDHLLAIYRRTGDTSFTYKEIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGL
Ga0172377_107122651	3300014206	Landfill Leachate	MRALSQSVIANEDHLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIPARDSNGVPLKGGSRARSNVWRWHPRAADLCRRSIAHQDADHRWENLARGLTGGDRG*
Ga0172377_110492413	3300014206	Landfill Leachate	MSGLSQSVWAHEDHLVEIYHRTGDTSFTHAQIADLISRGAMLRYTVPGIFIPARDLNGAPLKGGSRARSNVWRWHPRAAELCRQAIE
Ga0172377_113678411	3300014206	Landfill Leachate	MSGLSQLIWAHEDHLLAIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFLPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRGKNLANGLTGGSECA*
Ga0172382_102511796	3300015214	Landfill Leachate	MSGLSQSVWAHEDHLVEIYHRTGDTSFTHAQIADLISRGAMLRYTTPGIFLPARDLNGAPLKGGSRARSTIWRWHPRAAEMCRQAIERDRRWENLAAGLTGGSECV*
Ga0172382_102653244	3300015214	Landfill Leachate	MSSISQLVWAHEDHLVAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSNGVPLKGGSRARSNVWRWHPRAAELCRQAIERDRRWENLANGLTGGSECV*
Ga0172382_111576631	3300015214	Landfill Leachate	LSQSVIANEDHLVAIYRRTGDTSFTYGDIADLIPRGAMLRYTTPGIFLPARDAKGNPLKGGSRSRATVWRWHPRAAELCRQAIARDHRWENLAAGLTGGSECV*
Ga0208041_10157703	3300025393	Anaerobic Digestor Sludge	MSGLSQSVWAHEDHLLAIYRRTGDASFTYKEIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0208195_10369547	3300025713	Anaerobic Digestor Sludge	MSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV
Ga0208458_10376562	3300025714	Anaerobic Digestor Sludge	MSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0209096_11055741	3300025859	Anaerobic Digestor Sludge	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRASVWRWHPRAAELCRQAIERDHRWENLANGLT
Ga0209311_10541927	3300025871	Anaerobic Digestor Sludge	MSSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLAAGLMGEGSA
Ga0209509_100562311	3300026194	Anaerobic Biogas Reactor	MSGLSQLVWAHEDNLVEIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWCWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0209312_10063801	3300026195	Anaerobic Biogas Reactor	MSSGASQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0209313_10280254	3300026198	Anaerobic Biogas Reactor	MSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLAAGLTGGSECA
Ga0209510_11608371	3300026290	Anaerobic Biogas Reactor	MRALSQSVIANEDRLVAIYRRTGDSQFTHSEIADLISRGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERD
Ga0209537_10453674	3300027510	Biogas Fermentantion	MSGLPQLVWAHEDHLLAIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRRENLANGLTGGSECA
Ga0209075_10158118	3300027711	Agricultural Soil	MKDFHIWADILTAIYRRTGDRPFTHAKISDILPPGHIIRYVSRGYFLRVRDSDGTLAQGGARNRAAVWRWHPRAADLCRRSIAHQDADHRWENLARGLTGGDRG
Ga0209075_11818461	3300027711	Agricultural Soil	SQSVWAHEDHLVAIYRRTGDTQFTHSEIADLIPCGAMLRYTVPGIFIPARDAFGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV
Ga0209075_12580602	3300027711	Agricultural Soil	MSGLSQSVIANEDRLVAIYRRTGDTQFTHAQIADLIPCGAMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV
(restricted) Ga0255345_11419403	3300028568	Wastewater	GLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0265295_11468524	3300028601	Landfill Leachate	MSGLSQSVIANEDHLVAIYRRTGDTSFTHKEIADLIPCGRMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECV
Ga0265294_1004754810	3300028602	Groundwater	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRGAMVRYTAPGIFLLARDQNGAPIKGGSRGRASVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0265294_101472293	3300028602	Groundwater	MRALSQSVIANEDHLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIPARDSNGVPLKGGSRARSNVWRWHPRAADLCRRSIAHQDADHRWENLARGLTGGDRG
Ga0265294_102006484	3300028602	Groundwater	MSGLPQSVLANEDHLITIYRRTGDTPFTYGDIADLIPCGAMLRYTTPGIFLPARDSKGVPSKGGSRARSSVWRWHPRAAELCRRAIERDHRWENLAAGLTGGQECV
Ga0265294_102959031	3300028602	Groundwater	MSGLSQSVWAHEDHLLAIYRRTGDTSFTYKEIADLIPCGTMLRYTTPGIFLPARDLNGAPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWE
Ga0265293_100522911	3300028603	Landfill Leachate	MRALSQSVIANEDHLVAIYRRTGDTQFTHAQIADLIPCGTMLRYTVPGIFIPARDSNGVPLKGGSRARSNVWRWHPRAADLCRRSIAHQDADHRWENLARGLTG
Ga0265293_100713232	3300028603	Landfill Leachate	MSSISQLVWAHEDHLVAIYRRTGDTSFTHAQIADLIPCGTMLRYTVPGIFIPARDSNGVPLKGGSRARSNVWRWHPRAAELCRQAIERDRRWENLANGLTGGSECV
Ga0265293_105190142	3300028603	Landfill Leachate	MRGLSQSVIANEDHLVAIYRRTGDTSFTYKEIADLIPCGTMLRYTVPGIFIPARDSKGVPLKGGSRARSNVWCWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0265293_107154503	3300028603	Landfill Leachate	MSGLSQSVWAHEDHLVAIYRRTGDTSFTHKEIADLIPCGAMLRYTVPGIFIPARDAFGVPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWEN
Ga0302243_10602772	3300028627	Activated Sludge	MSSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTVPGIFIPARDSKGIPLKGGSRARSNVWCWHPRAAELCRQAIERDHRWENLAAGLTGGSECA
Ga0302249_10456302	3300028628	Activated Sludge	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIDRDRRWENLANGLTGGSECA
Ga0302248_10771032	3300028629	Activated Sludge	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0302247_10730391	3300028630	Activated Sludge	MSGLSQLVWAHEDNLVEIYRRTGDTSFTYGDIADLIPCGTMLRYTAPGIFLLARDQNGAPIKGGSRARSNVWRWHPRAAELCRQAIDRDRRWENLANGLTGG
Ga0302238_10716483	3300028644	Activated Sludge	MSSGVSQLVRVHEAHLVTIYRRTGDSQFTHSEIADLISRSAMVRYTAPGIFLLARDQNGAPIKGGSRGRSNVWCWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0167331_10251903	3300029311	Biosolids	MRGLSQSVIANEDRLVAIYRRTGDSQFTHSEIADLIPCGTMLRYTTLGIFLPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0167329_10121652	3300029440	Biosolids	MRGLSQSVIANEDRLVAIYRRTGDSQFTHSEIADLIPCGTMLRYTTLGIFLPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIARDHRWENLANGLTGGSECA
Ga0167330_10229354	3300029781	Biosolids	MRALSQSVIANEDRLVAIYRRTGDSQFTHSEIADLIPCGTMLRYTTLGIFLPARDSKGIPLKGGSRARSNVWRWHPRAAELCRQAIERDHRWENLANGLTGGSECA
Ga0134854_100121312	3300029822	Fermentation Pit Mud	MRGLSQSVWAHEDQLISIYRRTGDAQFTHSEIADLISRGAMLRYTAPGIFVPARDAKGNPIKAGSRSRSQVWRWHPYAAELCRRAIERDHRWENLAAGLTGGSECA
Ga0134835_100134743	3300029825	Fermentation Pit Mud	MRGLSQSVIANEEHLVQIYRRTGDTQFTYSDIADLIPRGVMLRYTTPGIFVPARDPNGIPLKGGSRSRATVWRWHPRAAELCRRAIERDHRWENLAAGLTGGSECA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters