| Basic Information | |
|---|---|
| Family ID | F088900 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 109 |
| Average Sequence Length | 61 residues |
| Representative Sequence | MSIKKYTNIEGINNKTENEGQFLQTDDLFIVSKSEIETTDFGNTKYDVMEVSVYDINN |
| Number of Associated Samples | 83 |
| Number of Associated Scaffolds | 109 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 7.14 % |
| % of genes near scaffold ends (potentially truncated) | 25.69 % |
| % of genes from short scaffolds (< 2000 bps) | 21.10 % |
| Associated GOLD sequencing projects | 76 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.17 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (75.229 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (19.266 % of family members) |
| Environment Ontology (ENVO) | Unclassified (44.037 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (48.624 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 12.79% β-sheet: 0.00% Coil/Unstructured: 87.21% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.17 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 109 Family Scaffolds |
|---|---|---|
| PF04965 | GPW_gp25 | 4.59 |
| PF04865 | Baseplate_J | 0.92 |
| PF01327 | Pep_deformylase | 0.92 |
| PF13640 | 2OG-FeII_Oxy_3 | 0.92 |
| PF16861 | Carbam_trans_C | 0.92 |
| COG ID | Name | Functional Category | % Frequency in 109 Family Scaffolds |
|---|---|---|---|
| COG0242 | Peptide deformylase | Translation, ribosomal structure and biogenesis [J] | 0.92 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 75.23 % |
| All Organisms | root | All Organisms | 24.77 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300001282|B570J14230_10071703 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1093 | Open in IMG/M |
| 3300002835|B570J40625_100592337 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1017 | Open in IMG/M |
| 3300005580|Ga0049083_10029540 | All Organisms → Viruses → Predicted Viral | 1957 | Open in IMG/M |
| 3300005581|Ga0049081_10000451 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 15718 | Open in IMG/M |
| 3300005805|Ga0079957_1136187 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1272 | Open in IMG/M |
| 3300007544|Ga0102861_1239102 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 503 | Open in IMG/M |
| 3300007962|Ga0102907_1167142 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 565 | Open in IMG/M |
| 3300009056|Ga0102860_1034814 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1332 | Open in IMG/M |
| 3300009057|Ga0102892_1072067 | Not Available | 660 | Open in IMG/M |
| 3300009419|Ga0114982_1249495 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 553 | Open in IMG/M |
| 3300012665|Ga0157210_1002171 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 5293 | Open in IMG/M |
| 3300013005|Ga0164292_10006741 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 9369 | Open in IMG/M |
| 3300017784|Ga0181348_1227718 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 655 | Open in IMG/M |
| 3300020172|Ga0211729_10152596 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 541 | Open in IMG/M |
| 3300021963|Ga0222712_10022431 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 5203 | Open in IMG/M |
| 3300022190|Ga0181354_1226741 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 544 | Open in IMG/M |
| 3300024346|Ga0244775_10636715 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 863 | Open in IMG/M |
| 3300027186|Ga0208797_1004868 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 2054 | Open in IMG/M |
| 3300027227|Ga0208929_1078667 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 637 | Open in IMG/M |
| 3300027244|Ga0208173_1012978 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1692 | Open in IMG/M |
| 3300027631|Ga0208133_1039572 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1159 | Open in IMG/M |
| 3300027763|Ga0209088_10145928 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1049 | Open in IMG/M |
| 3300027804|Ga0209358_10146697 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1265 | Open in IMG/M |
| 3300028025|Ga0247723_1039125 | All Organisms → Viruses → Predicted Viral | 1425 | Open in IMG/M |
| 3300031857|Ga0315909_10216370 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1503 | Open in IMG/M |
| 3300031857|Ga0315909_10307092 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1182 | Open in IMG/M |
| 3300034018|Ga0334985_0552497 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 652 | Open in IMG/M |
| 3300034102|Ga0335029_0123589 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1801 | Open in IMG/M |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 19.27% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 12.84% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 9.17% |
| Estuarine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine | 9.17% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 8.26% |
| Freshwater | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater | 8.26% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater | 5.50% |
| Freshwater, Plankton | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton | 4.59% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 4.59% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 3.67% |
| Freshwater Lentic | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic | 2.75% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 1.83% |
| Deep Subsurface Sediment | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment | 1.83% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater | 0.92% |
| Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake | 0.92% |
| Freshwater | Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater | 0.92% |
| Freshwater And Marine | Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine | 0.92% |
| Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 0.92% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 0.92% |
| Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 0.92% |
| Estuary Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water | 0.92% |
| Deep Subsurface | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface | 0.92% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000882 | Freshwater microbial communities from the Columbia River | Environmental | Open in IMG/M |
| 3300001282 | Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion | Environmental | Open in IMG/M |
| 3300002835 | Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605) | Environmental | Open in IMG/M |
| 3300003404 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD | Environmental | Open in IMG/M |
| 3300003411 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD | Environmental | Open in IMG/M |
| 3300004805 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M | Environmental | Open in IMG/M |
| 3300005580 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF | Environmental | Open in IMG/M |
| 3300005581 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF | Environmental | Open in IMG/M |
| 3300005662 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4) | Environmental | Open in IMG/M |
| 3300005805 | Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA | Environmental | Open in IMG/M |
| 3300006484 | Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 | Environmental | Open in IMG/M |
| 3300007544 | Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3 | Environmental | Open in IMG/M |
| 3300007559 | Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 | Environmental | Open in IMG/M |
| 3300007630 | Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02 | Environmental | Open in IMG/M |
| 3300007670 | Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3 | Environmental | Open in IMG/M |
| 3300007962 | Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02 | Environmental | Open in IMG/M |
| 3300007974 | Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um | Environmental | Open in IMG/M |
| 3300008052 | Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02 | Environmental | Open in IMG/M |
| 3300008107 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA | Environmental | Open in IMG/M |
| 3300008113 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA | Environmental | Open in IMG/M |
| 3300008120 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA | Environmental | Open in IMG/M |
| 3300009056 | Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3 | Environmental | Open in IMG/M |
| 3300009057 | Estuarine microbial communities from the Columbia River estuary - metaG 1553A-3 | Environmental | Open in IMG/M |
| 3300009068 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG | Environmental | Open in IMG/M |
| 3300009163 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG | Environmental | Open in IMG/M |
| 3300009164 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG | Environmental | Open in IMG/M |
| 3300009180 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG | Environmental | Open in IMG/M |
| 3300009419 | Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT | Environmental | Open in IMG/M |
| 3300010312 | Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02 | Environmental | Open in IMG/M |
| 3300010354 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA | Environmental | Open in IMG/M |
| 3300012665 | Freshwater microbial communities from Talbot River, Ontario, Canada - S11 | Environmental | Open in IMG/M |
| 3300012968 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300013004 | Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG | Environmental | Open in IMG/M |
| 3300013005 | Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG | Environmental | Open in IMG/M |
| 3300017778 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D | Environmental | Open in IMG/M |
| 3300017784 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N | Environmental | Open in IMG/M |
| 3300017788 | Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20L | Environmental | Open in IMG/M |
| 3300019784 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D | Environmental | Open in IMG/M |
| 3300020162 | Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1 | Environmental | Open in IMG/M |
| 3300020172 | Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1 | Environmental | Open in IMG/M |
| 3300020196 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0m | Environmental | Open in IMG/M |
| 3300020197 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m | Environmental | Open in IMG/M |
| 3300020205 | Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1 | Environmental | Open in IMG/M |
| 3300020524 | Freshwater microbial communities from Lake Mendota, WI - 16NOV2012 deep hole epilimnion (SPAdes) | Environmental | Open in IMG/M |
| 3300021141 | Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion | Environmental | Open in IMG/M |
| 3300021962 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D | Environmental | Open in IMG/M |
| 3300021963 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D | Environmental | Open in IMG/M |
| 3300022190 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N | Environmental | Open in IMG/M |
| 3300023184 | Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503 | Environmental | Open in IMG/M |
| 3300024343 | Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction | Environmental | Open in IMG/M |
| 3300024346 | Whole water sample coassembly | Environmental | Open in IMG/M |
| 3300027129 | Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8h | Environmental | Open in IMG/M |
| 3300027186 | Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 (SPAdes) | Environmental | Open in IMG/M |
| 3300027193 | Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes) | Environmental | Open in IMG/M |
| 3300027210 | Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027213 | Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027224 | Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02 (SPAdes) | Environmental | Open in IMG/M |
| 3300027227 | Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02 (SPAdes) | Environmental | Open in IMG/M |
| 3300027242 | Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02 (SPAdes) | Environmental | Open in IMG/M |
| 3300027244 | Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02 (SPAdes) | Environmental | Open in IMG/M |
| 3300027250 | Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02 (SPAdes) | Environmental | Open in IMG/M |
| 3300027631 | Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes) | Environmental | Open in IMG/M |
| 3300027707 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes) | Environmental | Open in IMG/M |
| 3300027734 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027744 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes) | Environmental | Open in IMG/M |
| 3300027749 | Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027756 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes) | Environmental | Open in IMG/M |
| 3300027763 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027798 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes) | Environmental | Open in IMG/M |
| 3300027804 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes) | Environmental | Open in IMG/M |
| 3300027963 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300028025 | Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC | Environmental | Open in IMG/M |
| 3300028394 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2) | Environmental | Open in IMG/M |
| 3300031857 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125 | Environmental | Open in IMG/M |
| 3300031951 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120 | Environmental | Open in IMG/M |
| 3300032050 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122 | Environmental | Open in IMG/M |
| 3300032093 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117 | Environmental | Open in IMG/M |
| 3300032116 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119 | Environmental | Open in IMG/M |
| 3300033996 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004 | Environmental | Open in IMG/M |
| 3300034018 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021 | Environmental | Open in IMG/M |
| 3300034062 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045 | Environmental | Open in IMG/M |
| 3300034068 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031 | Environmental | Open in IMG/M |
| 3300034102 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| FwDRAFT_102699791 | 3300000882 | Freshwater And Marine | MAIKKYTNFDAVNAKTTNEGEYLQSEDLFIVSKNEIEDTDFGDCHYDVMEVSVYDINNNLLPHKSGKSVEYVKSEHI |
| B570J14230_100717032 | 3300001282 | Freshwater | MSIKKYTNIDNINNNSENAGQFLQTEDLFIVTQNQIEDTDFGDCRYDVMEVSVYDINNN |
| B570J40625_1005923372 | 3300002835 | Freshwater | MSITKYTNIDSINNNSANEGKFIDDKDLFILSKNEIEKADFGNSRYDVMEVSVYDINNNLLPHKSGKNVAYIKKGDIQNYLYN |
| B570J40625_1017012091 | 3300002835 | Freshwater | MAIQKYTNFEQINVRLENEGKYLQPEDLFIVTKEESEISEFGTCKYDVMEVSVYDINNNILPHKSGNNVSYVK |
| B570J40625_1017029052 | 3300002835 | Freshwater | MSIKKYTNIEDIDNKSSNEGQFLQADDLFIVSKSEIEETDFGNCKYDVME |
| JGI25920J50251_101468322 | 3300003404 | Freshwater Lake | MSIKKYTNIDAINNKTDNQGQYLQSEDLFIISNNEIEDTD |
| JGI25911J50253_101911602 | 3300003411 | Freshwater Lake | MSIKKYTNIEGINNKTENEGQFLQTDDLFIVSKSEIETTDFGNTKYDVMEVSVYDINNNLLPQISGNNVAYIK |
| Ga0007792_101444262 | 3300004805 | Freshwater | MSVTKYTNIDGINNKTENEGKFLQSDDLFIVSQGQIEDTDFGGCKYDVMEVSVYDINNNLLPHQTGNNVA |
| Ga0049083_100295403 | 3300005580 | Freshwater Lentic | MSIKKYTNIEGINNKTENEGQFLQTDDLFIVSKSEIETTDFGNTKYDVMEVSIYDINNNLLPQISGNNVAYIKGDDIKN |
| Ga0049081_1000045124 | 3300005581 | Freshwater Lentic | MSIKKYTNFEQIDSKVENKGQFLQKDDLFIVSKTEIEETDFGDCKYDVMEV |
| Ga0049081_102120691 | 3300005581 | Freshwater Lentic | MSIKKYTNIDGINNKSENEGQFLQSDDLFIVSKTEIDT |
| Ga0078894_114726162 | 3300005662 | Freshwater Lake | MAIKKYTNFDGINSNSTNEGQFLQADDLFIVSKNEIEEADFGECRYDVMEVSIYDVNNLL |
| Ga0079957_11361871 | 3300005805 | Lake | MSIKKYTNIEDINNKSSNEGQFLQKDDLFIVSKNEIETTDFGSCKYDVMEVSVY |
| Ga0070744_100253873 | 3300006484 | Estuarine | MAIKKYTNFDGINSNSTNEGQFLQADDLFIVSKNEIEEADFGECRYDVMEVSIYDV |
| Ga0070744_100829591 | 3300006484 | Estuarine | MSIKKYTNFEQIDSKVENKGQFLQKDDLFIVSKTEIEETDFGDCKYDVMEVSVYDIN |
| Ga0070744_100880452 | 3300006484 | Estuarine | MAIKKYTNFDGINTNSTNEGQFLQADDLFIVSKNEIEEADFGECRYDVMEVSIYDV |
| Ga0102861_12391022 | 3300007544 | Estuarine | MAIKKYTNFDGINSNSTNEGQFLQADDLFIVSKNEIEEADFGECRYDVMEVSIYDVNNLLLPNKTGNNVAYIKTGDIKNY |
| Ga0102828_10894032 | 3300007559 | Estuarine | MSIKKYTNFEQIDVNTDNKGKFLLADDLFIVSKNEIQETDFGDCKYDVMEVSVYDINSNLLPQ |
| Ga0102903_11013722 | 3300007630 | Estuarine | MSIKKYTNIDNINNNSENAGQFLQTEDLFIVSQNQIEDTDFGDCKYDVMEVSVYDINNNLLPQKNG |
| Ga0102862_10149193 | 3300007670 | Estuarine | MSIKKYTNIEGINNKTENEGQFLQSDDLFIISKSEIETTDFGNTKYDVMEVSVYDINNNLLP |
| Ga0102907_11671422 | 3300007962 | Estuarine | MSIKKYTNIDNINNNSENAGQSLQTEDLFIVSQNQIEDTDFGDCKYDVMEVSVYDINNNLLPQKSGNNVAYIKTGDIKN |
| Ga0105747_11155751 | 3300007974 | Estuary Water | MSIKKYTNFEQIDSKAENKGQFLQKDDLFIVSKTEIEETDFGDCKYD |
| Ga0102893_10001381 | 3300008052 | Estuarine | MSIKKYTNIDNINNNSENAGQFLQTEDLFIVSQNQIEDTDF |
| Ga0114340_10688821 | 3300008107 | Freshwater, Plankton | MSIKKYTNIEQLNDKSENEGKFIEKDDLFIVSKEQIKEADFGDCKYDVMEVSVYDINNNLLP |
| Ga0114340_11280132 | 3300008107 | Freshwater, Plankton | MSIKKYTNFEQVNLKTDNEGQYLQAEDFFIVTKNEKEETVFGNCKYDIMEVSVYDINNNLLPHKSGNS |
| Ga0114346_10103433 | 3300008113 | Freshwater, Plankton | MSIKKYTNFESIDANTSNGGEFLQENDKFIINQNQIEDTDFGDCKHDVMEVSVYDINTLLIMLVKKS* |
| Ga0114346_12031562 | 3300008113 | Freshwater, Plankton | MSIKKYTNIEDINNKSSNEGQFLQSDDLFIVSKSE |
| Ga0114355_10247004 | 3300008120 | Freshwater, Plankton | MSITKYTNIDDINNKSSNEGKFSQADDLFIVSKNEIEKTDFGMGKYDVMEVSVYDINNNLLPQKSGNNVAYIR |
| Ga0102860_10348141 | 3300009056 | Estuarine | MSIKKYTNIEGINNKTENEGQFLQSDDLFIISKSEIETTDFGNTKYDVM |
| Ga0102892_10720671 | 3300009057 | Estuarine | MSIKKYTNIDNINNNSENAGQFLQTEDLFIVSQNQIEDTDFGDCR |
| Ga0114973_106782541 | 3300009068 | Freshwater Lake | MSIKKYTNIDSINAKIDNEGRFLQPEDFFIVSKNEIEETEFGECKYDVMEVSVYDINNNLLPQKS |
| Ga0114970_107112322 | 3300009163 | Freshwater Lake | MSIKKYTNIENIDNKSSNEGQFLQSDDLFIVSKTEIDTTDFGD |
| Ga0114975_103276332 | 3300009164 | Freshwater Lake | MSIKKYTNIDGINNKTENEGQFLQADDLFIVSKSEINTTDFGDCKYDVME |
| Ga0114979_107200292 | 3300009180 | Freshwater Lake | MSIKKYTNIENIDNKSSNEGQFLQSDDLFIVPKTEIDTTDFGDCKYDVME |
| Ga0114982_12494951 | 3300009419 | Deep Subsurface | MSITKYTNIDSINNNSTNEGKFIDDKDLFILSKNEIEKSDFGNSRYDVMEVSVYDINNNLLPHKSGNNVAYIKKGDIQSYLYN |
| Ga0102883_11270092 | 3300010312 | Estuarine | MSIKKYTNIDNINNNSENAGQFLQTEDLFIVSQNQIEDTDFGDCK |
| Ga0129333_101273693 | 3300010354 | Freshwater To Marine Saline Gradient | MSITKYTNFDAVNQKTENEGKFLQLEDNVIVTKNEIETADFGECKHDVMEVSVYDVNNNLLPQK |
| Ga0157210_10021717 | 3300012665 | Freshwater | MSIKKYTNIEDINNKSSNEGQFLQSDDLFIVSKSEIEATDFGNGKYDVM |
| Ga0129337_10515692 | 3300012968 | Aqueous | MSIKKYTNIEDINNKSSNEGQFIQKDDLFIVAKNEIE |
| Ga0164293_100860621 | 3300013004 | Freshwater | MSIKKYTNIDAINNKTDNQGQYLQSEDLFIVSKNEIEDTDF |
| Ga0164292_100067411 | 3300013005 | Freshwater | MSITKYTNFEQIDSRKENKGNFLLKDDLLIVSKTEIEEADFGDCKHDVMEVSIYDVNNVLLPNKAGNNVAYLKPN |
| Ga0164292_108337672 | 3300013005 | Freshwater | MSITKYTNFEEIDSRKENKGNFLLKDDLFIVSKTEIEDADFGDCKHDVMEVSIYDVNNVLLPNKAGNN |
| Ga0181349_10221164 | 3300017778 | Freshwater Lake | MSIKKYTNFEQIDSKVENKGQFLQKDDLFIVSKTEIEETDFGDCKYDVMEVSVYDINNNLLPQKSGNNVAYVKTG |
| Ga0181348_11207941 | 3300017784 | Freshwater Lake | MSIKKYTNFEQIDGNVDNKGKFLQAEDLFIVSKNEIEETDFGECKYDVMEVSVYDI |
| Ga0181348_12277182 | 3300017784 | Freshwater Lake | MSIKKYTNIDAINNKTDNQGQYLQSEDLFIISNNEIEDTDFGDCERDVMEVSVYDINNNLLPHKTGNNVAYIKPNNIKDYLY |
| Ga0169931_103740092 | 3300017788 | Freshwater | MSIKKYTNIDDINNKSSNEGQFLQKDDLFIVSKNEIETTDFGSCKYDVMEVSVYDISNNLLPQKSGNNISYI |
| Ga0181359_12027322 | 3300019784 | Freshwater Lake | MSIKKYTNIEDINNKSSNEGQFLQSDDLFIVSKSEIEATDFGNGKYD |
| Ga0211735_113962741 | 3300020162 | Freshwater | MSIKKYTNIDGINNKTENEGQFLQADDLFIVSKKEIETTDFGNCKYDVMEVSIYDINNNLLPQNTLN |
| Ga0211729_101525962 | 3300020172 | Freshwater | MAIKKYTNFEEVNSKNVNEGQYLQADDLFIISKSEIDTTEFGECKYDVMEVSVYDINNNLLPHKSGNNVAYIKTGDI |
| Ga0211729_104237061 | 3300020172 | Freshwater | MSIKKYTNIEAINNKTDNQGQYLQSEDLFIVSKNEIETTDFGNCKYDVMEVSIYDINNNL |
| Ga0211729_108233322 | 3300020172 | Freshwater | MSIKKYTNIENIDNKSSNEGQFLQADDLFIVSKTEIDTTDFGDCK |
| Ga0194124_101276013 | 3300020196 | Freshwater Lake | MGIQKYTNFDAVNSKTENEGKYLQAEDLFIVSKNEIEETDFGECKYDVMEVSVYDINNNLLP |
| Ga0194128_100173659 | 3300020197 | Freshwater Lake | MGIKKYTNFEQVELKTENEGQFIQAKDFFIVTKNEKEETDFGVCKYDVMEVSVYDVNNNLLPQKSGQN |
| Ga0211731_116747222 | 3300020205 | Freshwater | MSIKKYTNIDGINNKTENEGQFLQADDLFIVSKKEIETTDFGNCKYDAMEVS |
| Ga0208858_10285992 | 3300020524 | Freshwater | MSIKKYTNIEGINNKTENEGQFLQTDDLFIVSKTEIDTTDFGDCKYDVMEVSLYDINNNILPQ |
| Ga0214163_10287133 | 3300021141 | Freshwater | MSIKKYTNIDAINNKTDNQGQYLQSEDLFIVSKNEIEDTDFGDCERDVME |
| Ga0222713_104456481 | 3300021962 | Estuarine Water | MALKKYTNFEAVNAKTTNEGKYLQSEDLFIVSKNEIEDTDFGDCKYDVMEVSVYDINNNLLPHKSGKNVEY |
| Ga0222712_100224311 | 3300021963 | Estuarine Water | MSIKKYTNLDEINNKSQNEGQFLQAEDLFIVSKNEIEDTDFGDCKYDVMEVSVYD |
| Ga0222712_102892051 | 3300021963 | Estuarine Water | MSIKKYTNVDEINSKSQNEGQFLQAEDLFIVSKNEIEDTDFGDCKYDVMEVSVYDINSNL |
| Ga0222712_103518682 | 3300021963 | Estuarine Water | MSIKKYTNFEQIDVNVDNKGKFLQAEDLFIVSKNEIEETDFGDCKYDVMEVSVYDINSNLLPHKSGKSVA |
| Ga0181354_12267411 | 3300022190 | Freshwater Lake | MSIKKYTNFEQINSKAENKGQFLQKDDLFIVSKTEIEETDFGDCRHDVMEVSVYDINNNLLPQTSGKNVAYIKTGDIK |
| Ga0214919_105339891 | 3300023184 | Freshwater | MSIKKYTNIDGINNKTENEGQFLQADDLFIVSKSEIDTTDFGDCKYDVMEVSLYDINNNILPQSSG |
| Ga0244777_100281111 | 3300024343 | Estuarine | MSIKKYTNIDNINNNSENAGQFLQTEDLFIVSQNQIEDTDFGDCKYDVMEVS |
| Ga0244775_102859832 | 3300024346 | Estuarine | MSIKKYTNIDGINNKTNNEGQYLQPDDLFIVSKSEINTTDFGDCKYDVMEVSLYDINNNILPQA |
| Ga0244775_106367151 | 3300024346 | Estuarine | MSIKKYTNIDNINNNSENVGQFLQSEDLFIVNQNQIEDTDFGDCRYDVMEVSVYDINNNLLPHKSGKNVAYIK |
| Ga0244775_106548402 | 3300024346 | Estuarine | MSIKKYTNIENIDNKSSNEGQFLQADDLFIVSKTEIDTTDFGDCKYDVMEVTLYDTNNNLLPQSTGNNVAYIKTN |
| Ga0244775_115200182 | 3300024346 | Estuarine | MSIKKYTNIEGINNKTENEGQFLQTNDLFIVSKSEIETTDFGNTKYD |
| Ga0255067_10368761 | 3300027129 | Freshwater | MAIKKYTNFDGINTNSTNEGQFLQADDLFIVSKNEIEEADFGECRYDVMEVSIYDVNNLLLPNKTGNNVA |
| Ga0208797_10048681 | 3300027186 | Estuarine | MAIKKYTNIEGIDNKTENEGQFLQMDDLFIISKNEIQSTDFGDCKYDIMEVSIYDINNNLLPQISG |
| Ga0208797_10253731 | 3300027186 | Estuarine | MSIKKYTNIEGINNKTENEGQFLQSDDLFIISKSEIETTDFG |
| Ga0208800_10068302 | 3300027193 | Estuarine | MAIKKYTNFDGINSNSTNEGQFLQADDLFIVSKNEIEEADFGECRYDVMEVSIYDVNNLLLPNKTGNNVAYI |
| Ga0208802_10075713 | 3300027210 | Estuarine | MSIKKYTNIEGINNKTENEGQFLQSDDLFIISKSEIETTDFGNTKYDVMEVSVYDINNNLLPQ |
| Ga0208555_10393691 | 3300027213 | Estuarine | MSIKKYTNIEGINNKTENEGQFLQSDDLFIISKSEI |
| Ga0208164_10161252 | 3300027224 | Estuarine | MSIKKYTNIEGINNKTENEGQFLQSDDLFIISKSEIETTDFGNTKYDVMEVSVYDVNNNLLPQKSGNNVAYI |
| Ga0208929_100030317 | 3300027227 | Estuarine | MSIKKYTNIDNINNNSENAGQFLQTEDLFIVSQNQIEDTDFGDCKYDVMEVSVYDINNNLLPQKSGN |
| Ga0208929_10786672 | 3300027227 | Estuarine | MSIKKYTNIDNINNNSENVGQFLQSEDLFIVNQNQIEDTDFGDCRYDVMEVSVYDINNNLLPHKSGKNVAYIKTG |
| Ga0208806_10610161 | 3300027242 | Estuarine | MAIKKYTNFDGINSNSTNEGQFLQADDLFIVSKNEIEEADFGECRYDVMEVSIYDVNN |
| Ga0208173_10129781 | 3300027244 | Estuarine | MAIKKYTNFDGINSNSTNEGQFLQADDLFIVSKNEIEEADFGECRYDVMEVSIYDVNNLLLPNKTGNNVAYIKTGD |
| Ga0208310_10186552 | 3300027250 | Estuarine | MSIKKYTNIDNINNNSENAGQFLQTEDLFIVNQNQIEDTDFGDCRYDVMEVSVYDINNNLLPHKSG |
| Ga0208133_10170783 | 3300027631 | Estuarine | MAIKKYTNFDGINTNSTNEGQFLQADDLFIVSKNEIEEADFGECRYDVMEVSIY |
| Ga0208133_10395722 | 3300027631 | Estuarine | MSIKKYTNIDNINNNSENAGQFLQTEDLFIVSQNQIEDTDFGDCRYDVMEVSVYDVNNNLLPQKSGNNVAYIKTGDIKN |
| Ga0208133_10544871 | 3300027631 | Estuarine | MSIKKYTNFEQIDSKVENKGQFLQKDDLFIVSKTEIEETDFGDCKYDVMEVSVYD |
| Ga0209443_12358331 | 3300027707 | Freshwater Lake | MSIKKYTNFEQIDGNVDNKGKFLQAEDLFIVSKNEIEETDFGEC |
| Ga0209087_13405282 | 3300027734 | Freshwater Lake | MAIKKYTNFEAVNAKTENEGKYLQLDDQFIVTKNEIQETDFGECKYDVMEVSVYDINNNLLPHKTGNNVAYI |
| Ga0209355_13574932 | 3300027744 | Freshwater Lake | MAIKKYTNIEGIDNKTENEGQFLQMDDLFIISKNEIQS |
| Ga0209084_11511611 | 3300027749 | Freshwater Lake | MSIKKYTNFTGINSNTENVGHFIESNDLFIISKNEIEETEFGISKHDVMEVSVYDINNNL |
| Ga0209444_101143822 | 3300027756 | Freshwater Lake | MSIKKYTNFEQIDSKVENKGQFLQKDDLFIVSKTEIEETDFGDCKYDVMEVSVY |
| Ga0209444_102795112 | 3300027756 | Freshwater Lake | MSIKKYTNIEGINNKTENEGQFLQTDDLFIVSKSEIETTDFGNTKYDVMEVSVYDINN |
| Ga0209088_101459282 | 3300027763 | Freshwater Lake | MSIKKYTNIDNINNNSENVGQFLQSEDLFIVNQNQIEDTDFGDCRYDVMEVSVYDINNNLLPHKSGKNV |
| Ga0209353_101909112 | 3300027798 | Freshwater Lake | MSIKKYTNIEGINNKTENEGQFLQTDDLFIISKSEIETTDFGNTKYDVMEVSIYDINNNLLPQISGNNVAYIKGDD |
| Ga0209358_101466971 | 3300027804 | Freshwater Lake | MSIQKYTNFENINNKTENTGKFLENKDLFIVSNNEIEVSEFGNTPYDVMEVSVYDINNNLLPQKSGNNVAYIKST |
| Ga0209400_13573131 | 3300027963 | Freshwater Lake | MSIKKYTNIDGINNKTDNEGQFLQADDLFIVSKKEIEDTDFGNCKYDVMEVF |
| Ga0247723_10391251 | 3300028025 | Deep Subsurface Sediment | MSITKYTNIDSINNNSTNEGKFIDDKDLFILSKNEIEKSDFGNSRYDIMEVSVYDINNNLLPHKSGNNVAYIKKGDIQKYLYN |
| Ga0247723_10703571 | 3300028025 | Deep Subsurface Sediment | MSITKYTNIDSINNNSTNEGKFIDDKDLFILSKNEIEKSDFGNSRYDVMEVSVYDINNNLLPHKSGNN |
| Ga0304730_100398711 | 3300028394 | Freshwater Lake | MSIKKYTNFEKIDGNVDNKGKFLQAEDLFIVSKNEIEETDFGDCKYDVMEVSVYDINSNLLPQKTGNNVAYIK |
| Ga0315909_102163703 | 3300031857 | Freshwater | MSIKKYTNFESIDSNTSNKGEFLQENDKFIINQNQIEDTDFGDCRHDVMEVSVYDINSNLLPQKNGKNVAYIKT |
| Ga0315909_103070921 | 3300031857 | Freshwater | MSIKKYTNIEDINNKSSNEGQFIQKDDLFIVAKNEIEGTDFGSCKYDVMEVSVYDINNNL |
| Ga0315909_107529361 | 3300031857 | Freshwater | MSITGYKNFDRINQKLDNEGKFLQDKDAFILSNSEIEDTDFGDCKYDVMEVSVYDINNNLLPQKSGNTVAY |
| Ga0315904_111741401 | 3300031951 | Freshwater | MSIKKYTNFEQIDSKVENKGQFLQKDDLFIVSKTEIEETDFGDCKYDVMEVSVYDVNSNL |
| Ga0315906_100347016 | 3300032050 | Freshwater | MSIKKYTNFEQVNLKTTNEGQYLQTEDFFIVTKNEIEESYFGECKYDVMEVAVYDVNNNLLPQKTGNNVA |
| Ga0315906_112011022 | 3300032050 | Freshwater | MSIKKYTNIENINDKSSNEGQFLQADDLFIISKSEIEATDFGNGKY |
| Ga0315902_113161312 | 3300032093 | Freshwater | MSIKKYTNFEEVNLKTVNEGQYLQAEDFFIVTKNEKEESYFSECKYDVMEASVYDINSNLLPQKGGNN |
| Ga0315903_105492502 | 3300032116 | Freshwater | MSIKKYTNIEDINNKSSNEGQFIQSDDLFIVSKSEIEATDFGNGKYDVMEVSLYDVNNNLLPQTSGNNV |
| Ga0315903_106241392 | 3300032116 | Freshwater | MSIKKYTNIEDINNKSSNEGQFLQKDDLFIVSKNEIETTDFGSCKYD |
| Ga0334979_0183732_3_200 | 3300033996 | Freshwater | MSIKKYTNFEQIDSKVENKGQFLQKDDLFIVSKTEIEETDFGDCKYDVMEVSVYDVNSNLLPNKSG |
| Ga0334985_0552497_3_233 | 3300034018 | Freshwater | MSITKYTNIDSINNNSTNEGKFIDDKDLFILSKNEIEKSDFGNSRYDVMEVSVYDINNNLLPQKSGSSVAYIKKGDI |
| Ga0334995_0289720_2_199 | 3300034062 | Freshwater | MSIKKYTNIENIDNKSSNEGQFLQADDLFIVSKTEIDTTDFGDCKYDVMEVSLYDINNNILPQKSG |
| Ga0334990_0753799_324_500 | 3300034068 | Freshwater | MSIKKYTNFDAINSNKSNQGEFLLFDDNFIVTKNEVEATDFGDCKYDVMEVSIYDINNN |
| Ga0335029_0123589_1_123 | 3300034102 | Freshwater | MSIKKYTNIEGINNKTENEGQFLQTDDLFIVSKSEIETTDF |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |