Metagenome Family F088895

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088895
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	47 residues
Representative Sequence	LKEELSKAKHDRDRKAIRRIIADARKLNKTLKEMRNANTKLCPHCGEKL
Number of Associated Samples	85
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.74 %
% of genes near scaffold ends (potentially truncated)	94.50 %
% of genes from short scaffolds (< 2000 bps)	86.24 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (42.202 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (19.266 % of family members)
Environment Ontology (ENVO)	Unclassified (58.716 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (66.972 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.75% β-sheet: 2.60% Coil/Unstructured: 50.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF10276	zf-CHCC	4.59
PF00768	Peptidase_S11	3.67
PF06941	NT5C	2.75
PF03819	MazG	1.83
PF07460	NUMOD3	0.92
PF01258	zf-dskA_traR	0.92
PF00149	Metallophos	0.92
PF01145	Band_7	0.92
PF01068	DNA_ligase_A_M	0.92
PF02796	HTH_7	0.92
PF04055	Radical_SAM	0.92
PF00012	HSP70	0.92
PF02634	FdhD-NarQ	0.92
PF11416	Syntaxin-5_N	0.92
PF11750	DUF3307	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.67
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	2.75
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.92
COG1526	Formate dehydrogenase assembly factor FdhD, a sulfurtransferase	Energy production and conversion [C]	0.92
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.80 %
Unclassified	root	N/A	42.20 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	54.13 %
Unclassified	root	N/A	42.20 %
cellular organisms	root	All Organisms → cellular organisms	3.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	39.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.76 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	39.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.76 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	39.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.76 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	39.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.76 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	34.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.76 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	1.83 %
unclassified Chlorobiota	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.20 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	34.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.76 %
Lake Baikal phage Baikal-20-5m-C28	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	1.83 %
Chlorobiota bacteirum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10148497	Not Available	582	Open in IMG/M
3300002161\|JGI24766J26685_10039175	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1099	Open in IMG/M
3300002408\|B570J29032_109673991	All Organisms → Viruses → Predicted Viral	1033	Open in IMG/M
3300002835\|B570J40625_101367550	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	585	Open in IMG/M
3300003393\|JGI25909J50240_1017439	All Organisms → Viruses → Predicted Viral	1679	Open in IMG/M
3300003393\|JGI25909J50240_1048589	Not Available	886	Open in IMG/M
3300003412\|JGI25912J50252_10131660	Not Available	583	Open in IMG/M
3300003497\|JGI25925J51416_10072404	Not Available	864	Open in IMG/M
3300004096\|Ga0066177_10035319	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1703	Open in IMG/M
3300004123\|Ga0066181_10108766	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	769	Open in IMG/M
3300004126\|Ga0066179_10196765	Not Available	562	Open in IMG/M
3300005517\|Ga0070374_10195064	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300005580\|Ga0049083_10286748	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	551	Open in IMG/M
3300005581\|Ga0049081_10249674	Not Available	623	Open in IMG/M
3300005584\|Ga0049082_10020576	All Organisms → Viruses → Predicted Viral	2286	Open in IMG/M
3300005662\|Ga0078894_11372411	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	591	Open in IMG/M
3300005941\|Ga0070743_10122749	Not Available	869	Open in IMG/M
3300006484\|Ga0070744_10035045	All Organisms → Viruses → Predicted Viral	1482	Open in IMG/M
3300006484\|Ga0070744_10235240	Not Available	519	Open in IMG/M
3300007549\|Ga0102879_1150289	Not Available	712	Open in IMG/M
3300007559\|Ga0102828_1097441	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	714	Open in IMG/M
3300007600\|Ga0102920_1318221	Not Available	502	Open in IMG/M
3300007603\|Ga0102921_1263711	Not Available	616	Open in IMG/M
3300007622\|Ga0102863_1122367	Not Available	765	Open in IMG/M
3300007644\|Ga0102902_1242040	Not Available	530	Open in IMG/M
3300008110\|Ga0114343_1160831	Not Available	702	Open in IMG/M
3300008110\|Ga0114343_1231979	Not Available	508	Open in IMG/M
3300008111\|Ga0114344_1139427	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	841	Open in IMG/M
3300008111\|Ga0114344_1158765	Not Available	1218	Open in IMG/M
3300008120\|Ga0114355_1066939	Not Available	2742	Open in IMG/M
3300008261\|Ga0114336_1000310	Not Available	41953	Open in IMG/M
3300009086\|Ga0102812_10570449	Not Available	620	Open in IMG/M
3300009151\|Ga0114962_10686605	Not Available	524	Open in IMG/M
3300009159\|Ga0114978_10731604	Not Available	562	Open in IMG/M
3300009161\|Ga0114966_10587635	Not Available	623	Open in IMG/M
3300010157\|Ga0114964_10047373	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2269	Open in IMG/M
3300010354\|Ga0129333_11536571	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	545	Open in IMG/M
3300012000\|Ga0119951_1073491	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	885	Open in IMG/M
3300012663\|Ga0157203_1001536	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5620	Open in IMG/M
3300012663\|Ga0157203_1045785	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	596	Open in IMG/M
3300012663\|Ga0157203_1048398	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577	Open in IMG/M
3300012665\|Ga0157210_1062310	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	564	Open in IMG/M
3300013372\|Ga0177922_10331922	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	601	Open in IMG/M
3300013372\|Ga0177922_11255053	Not Available	759	Open in IMG/M
3300017722\|Ga0181347_1075874	Not Available	986	Open in IMG/M
3300017723\|Ga0181362_1083579	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300017761\|Ga0181356_1159306	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	694	Open in IMG/M
3300017774\|Ga0181358_1074011	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300017777\|Ga0181357_1171589	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	788	Open in IMG/M
3300017780\|Ga0181346_1281919	Not Available	569	Open in IMG/M
3300017784\|Ga0181348_1112137	All Organisms → Viruses → Predicted Viral	1055	Open in IMG/M
3300017784\|Ga0181348_1135207	Not Available	935	Open in IMG/M
3300017784\|Ga0181348_1304859	All Organisms → Viruses	532	Open in IMG/M
3300020160\|Ga0211733_10909448	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1218	Open in IMG/M
3300020161\|Ga0211726_11014560	Not Available	966	Open in IMG/M
3300020172\|Ga0211729_11192725	Not Available	1104	Open in IMG/M
3300020172\|Ga0211729_11314398	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	755	Open in IMG/M
3300020172\|Ga0211729_11318139	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobiota bacteirum	953	Open in IMG/M
3300020172\|Ga0211729_11354553	Not Available	570	Open in IMG/M
3300020205\|Ga0211731_10015875	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1314	Open in IMG/M
3300020205\|Ga0211731_10063857	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	720	Open in IMG/M
3300020205\|Ga0211731_11583852	Not Available	515	Open in IMG/M
3300020572\|Ga0207909_1020555	All Organisms → Viruses → Predicted Viral	1191	Open in IMG/M
3300022555\|Ga0212088_10636661	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	649	Open in IMG/M
3300024346\|Ga0244775_10102634	All Organisms → Viruses → Predicted Viral	2431	Open in IMG/M
3300024348\|Ga0244776_10705094	Not Available	623	Open in IMG/M
3300025162\|Ga0209083_1271042	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	611	Open in IMG/M
3300027146\|Ga0255104_1009726	All Organisms → Viruses → Predicted Viral	1955	Open in IMG/M
3300027148\|Ga0255115_1076688	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	584	Open in IMG/M
3300027212\|Ga0208554_1044672	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	704	Open in IMG/M
3300027333\|Ga0255138_1067749	Not Available	596	Open in IMG/M
3300027586\|Ga0208966_1065588	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1021	Open in IMG/M
3300027596\|Ga0255119_1066568	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	670	Open in IMG/M
3300027608\|Ga0208974_1054055	All Organisms → Viruses → Predicted Viral	1147	Open in IMG/M
3300027631\|Ga0208133_1025212	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1513	Open in IMG/M
3300027631\|Ga0208133_1097256	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	689	Open in IMG/M
3300027707\|Ga0209443_1168874	Not Available	786	Open in IMG/M
3300027769\|Ga0209770_10263191	Not Available	665	Open in IMG/M
3300027769\|Ga0209770_10373748	Not Available	531	Open in IMG/M
3300027797\|Ga0209107_10041030	All Organisms → Viruses → Predicted Viral	2635	Open in IMG/M
3300027797\|Ga0209107_10154466	All Organisms → Viruses → Predicted Viral	1169	Open in IMG/M
3300027797\|Ga0209107_10258388	Not Available	835	Open in IMG/M
3300027797\|Ga0209107_10426624	Not Available	600	Open in IMG/M
3300027805\|Ga0209229_10340209	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	657	Open in IMG/M
3300027836\|Ga0209230_10693497	Not Available	562	Open in IMG/M
3300027836\|Ga0209230_10716093	Not Available	550	Open in IMG/M
3300028394\|Ga0304730_1294601	Not Available	562	Open in IMG/M
3300031784\|Ga0315899_11305649	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	621	Open in IMG/M
3300031857\|Ga0315909_10422449	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	947	Open in IMG/M
3300032050\|Ga0315906_10479805	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1058	Open in IMG/M
3300032093\|Ga0315902_10114215	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2893	Open in IMG/M
3300033993\|Ga0334994_0400254	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	664	Open in IMG/M
3300034062\|Ga0334995_0737024	Not Available	549	Open in IMG/M
3300034064\|Ga0335001_0407173	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	730	Open in IMG/M
3300034066\|Ga0335019_0406942	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Lake Baikal phage Baikal-20-5m-C28	831	Open in IMG/M
3300034071\|Ga0335028_0569767	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	614	Open in IMG/M
3300034082\|Ga0335020_0001115	Not Available	19278	Open in IMG/M
3300034082\|Ga0335020_0277606	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	824	Open in IMG/M
3300034093\|Ga0335012_0002320	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11935	Open in IMG/M
3300034101\|Ga0335027_0904371	Not Available	501	Open in IMG/M
3300034102\|Ga0335029_0090256	All Organisms → Viruses → Predicted Viral	2177	Open in IMG/M
3300034105\|Ga0335035_0039400	All Organisms → Viruses → Predicted Viral	3137	Open in IMG/M
3300034117\|Ga0335033_0048989	All Organisms → Viruses → Predicted Viral	2587	Open in IMG/M
3300034117\|Ga0335033_0477800	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	600	Open in IMG/M
3300034119\|Ga0335054_0325057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	897	Open in IMG/M
3300034356\|Ga0335048_0110367	All Organisms → Viruses → Predicted Viral	1637	Open in IMG/M
3300034356\|Ga0335048_0441790	Not Available	636	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	85.32%
Marine	Environmental → Aquatic → Marine	14.68%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	39.45%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.86%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.50%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.67%
River	Environmental → Aquatic → Freshwater → River	3.67%
Coastal	Environmental → Aquatic → Marine → Coastal	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	39.45%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	28.44%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.50%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	4.59%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.67%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.83%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	19.27%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.68%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.84%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.26%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.50%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.50%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	5.50%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.59%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	4.59%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	3.67%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	3.67%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.67%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.67%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.83%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.92%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.92%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002161	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004123	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020572	Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025162	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)	Environmental	Open in IMG/M
3300027146	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepC_0h	Environmental	Open in IMG/M
3300027148	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepB_8h	Environmental	Open in IMG/M
3300027212	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02 (SPAdes)	Environmental	Open in IMG/M
3300027333	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepA_8d	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027596	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8h	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_101484971	3300000756	Freshwater And Sediment	KHERDRKIIKSHLTDARKLNKTLKEMRKVNTKLCPHCGEKL*
JGI24766J26685_100391755	3300002161	Freshwater And Sediment	AIRRIISDARKLNKTLKEMRNATTKLCPHCGEKL*
B570J29032_1096739911	3300002408	Freshwater	RDRKSIRRIIADSRKLNKTLKEMRNATTKLCPHCGEKL*
B570J40625_1013675501	3300002835	Freshwater	HLKEELSKAKGERDRKSIRRIIADARKLNKTLKGMRNANTKLCPHCGEKL*
JGI25909J50240_10174396	3300003393	Freshwater Lake	AELSKDKHERNRKWLKIQLRDAKALGKTVKEMRTANTKLCPHCGEKL*
JGI25909J50240_10485893	3300003393	Freshwater Lake	QKMKLHIKEELDKVKSDRDRKSIRRITSDARKLNKTLKEMRHASAKKCPHCGEKL*
JGI25912J50252_101316603	3300003412	Freshwater Lake	KMKLHLKAELSKDKHDRNRKWIKIQLSDARKLNKTLKEMRSVTTKLCPHCGEKL*
JGI25925J51416_100724044	3300003497	Freshwater Lake	SKTKHDRDRKAIRKITADARKLNKTLKEMRNATTKLCPHCGEKL*
Ga0066177_100353196	3300004096	Freshwater Lake	GRLTKMKLHLKEELSKAKGERNRKLIKSQLADAKKLNRTLKEMRNANTKLCPHCGEKL*
Ga0066181_101087664	3300004123	Freshwater Lake	GRLTKMKLHLKAELSKDKHERNRKWLKIQLRDAKALGKTVKEMRTANTKLCPHCGEKL*
Ga0066179_101967653	3300004126	Freshwater Lake	GRLNKMKLHLKEELGKAKHDRDRKAIRRITTDARKLNKTLKEMRNANTKLCPHCGEKL*
Ga0070374_101950641	3300005517	Freshwater Lake	RKAIRRLTADARKLAKTLKEMRNASAKNCPHCGEKL*
Ga0049083_102867481	3300005580	Freshwater Lentic	KEELSKAKGERDRKAIRRITADAKKLNKTLKDMRTANTRLCPHCGEKL*
Ga0049081_102496744	3300005581	Freshwater Lentic	KMKLHIKEELDKVKSDRDRKSIRRITADARKLNKTLKEMRNASAKKCPHCGEKL*
Ga0049082_100205761	3300005584	Freshwater Lentic	HLKAELSKDKHERNRKWLKSQLRETKALGKTVKEMRNANTKLCPHCGEKLI*
Ga0078894_113724112	3300005662	Freshwater Lake	HLKEELTKAKSDRDRKSIRRITADARKLNKSLKEMRSATTRLCPHCGEKL*
Ga0070743_101227491	3300005941	Estuarine	LNKMKLHLKEELTKAKDDRDRKAIRRIIADARKLNKTLKEMRNANTKLCPHCGEKL*
Ga0070744_100350451	3300006484	Estuarine	KAKGDRDRRTIRRITADARKLNRTLKEMRSATTRLCPHCGEKL*
Ga0070744_102352401	3300006484	Estuarine	GKVKSERNRKMIKNHLSDARKLNRTLKEMRQANTRLCPHCGEKL*
Ga0102879_11502891	3300007549	Estuarine	LKAELSKAKHERDKQAIKRIVVDARKLNRTLKEMRKANTRLCPHCGEKM*
Ga0102828_10974414	3300007559	Estuarine	FEGRLNKMKLHLKEELSKAKGERDRKAIRRITADAKKLNKTLKEMRNANTKLCPHCGEKL
Ga0102920_13182211	3300007600	Estuarine	KAIRRTVTDARKLNKTLKEMRNANTKLCPHCGEKL*
Ga0102921_12637111	3300007603	Estuarine	ERDKKAIRRTVTDARKLNKTLKEMRNANTKLCPHCGEKL*
Ga0102863_11223671	3300007622	Estuarine	KEELGKAKSDRDRKSIRRSIADARKLNKTLKEMRNAATKLCPHCGEKL*
Ga0102902_12420402	3300007644	Estuarine	KQAIKRIVVDARKLNRTLKEMRKANTRLCPHCGEKL*
Ga0114343_11608311	3300008110	Freshwater, Plankton	KEELTKAKSDRDRKSIRRSIADARKLNKTLKEMRNANTKLCPHCGEKL*
Ga0114343_12319792	3300008110	Freshwater, Plankton	KSIRRITTDARKLNKTLKEMRNAATKLCPHCGEKL*
Ga0114344_11394271	3300008111	Freshwater, Plankton	ELDKAKSERDRRAIRRITADARKLNKTLKEMRNASATKCPHCGEKL*
Ga0114344_11587651	3300008111	Freshwater, Plankton	RDRKSIRRLTADARKLNKTLKEMRNAAVKKCPHCGEKL*
Ga0114355_10669399	3300008120	Freshwater, Plankton	RKSIRRSIADARKLNKTLKEMRNADTKLCPHCGEKL*
Ga0114336_10003106	3300008261	Freshwater, Plankton	MKLHLKEELAKAKHERDRKSIRRLTADARKLNKTLKEMRNAAVKKCPHCGEKL*
Ga0102812_105704493	3300009086	Estuarine	HLKAELGKAKHERDRKIIKRHLFDARRLNKTLKEMRNANTKLCPHCGEKL*
Ga0114962_106866051	3300009151	Freshwater Lake	NKAKSDRDRKNMRRLTADARKLNKTLKEMRTASAKRCPHCGEKL*
Ga0114978_107316041	3300009159	Freshwater Lake	DRKIIKSHLTDARKLNKTLKEMRKANTKLCPHCGEKL*
Ga0114966_105876351	3300009161	Freshwater Lake	MKLHLKAELSKAKHERDKQAIKRIVVDARKLNRTLKEMRKANTRLCPHCGEKL*
Ga0114975_104622191	3300009164	Freshwater Lake	RDRKNMRSLLSYARKLNRTLKEMRNVSAKKCPHCGERL*
Ga0114964_100473731	3300010157	Freshwater Lake	RDRNMIKRQLSDARKLNRTLKEMRNTNTKRCPHCGEKL*
Ga0129333_115365713	3300010354	Freshwater To Marine Saline Gradient	KAKHERDKKAIRRIVYDARKLNKTLKEMRNSAAKKCPHCGEKI*
Ga0119951_10734911	3300012000	Freshwater	QKMKLHLKGELAKAKHERDKKAIRRIVYDARKLNKTLKEMRNVAAKRCPHCGEKL*
Ga0157203_100153615	3300012663	Freshwater	RLNKMKLHLKEELSKAKHDRDRKAIRRIITDARKLNKTLKEMRNANTKLCPHCGEKL*
Ga0157203_10457852	3300012663	Freshwater	AKHDRDRKSIRRITADARKLNKTLKEMRNAATKLCPHCGEKL*
Ga0157203_10483981	3300012663	Freshwater	GRLNKMKLHLKEELGKAKHDRDRKAIRRITADARKLNRTLKEMRNSTAKLCPHCGEKL*
Ga0157210_10623102	3300012665	Freshwater	KGERDRKAIRRIIADARKLNKTLKEMRNANTKMCPHCGEKL*
Ga0177922_103319222	3300013372	Freshwater	LNKMKLHLKAELSKVKHERDKKTIKRIVADARKLNKTLKEMRQVATKLCPHCGEKI*
Ga0177922_112550531	3300013372	Freshwater	KGERDRKAIRRIIADARKLNKTLKEMRNANTKLCPHCGEKL*
Ga0181347_10758744	3300017722	Freshwater Lake	KMKLHIKEELDKVKSDRDRKSIRRITADARKLNKTLKEMRNASAKKCPHCGEKL
Ga0181362_10835791	3300017723	Freshwater Lake	LSKAKSDRNRKAIRRLTADARKLAKTLKEMRNASAKNCPHCGEKL
Ga0181356_11593061	3300017761	Freshwater Lake	RLNKMKLHLKEELSKAKGERDRKAIRRITADAKKLNKTLKDMRTANTRLCPHCGEKL
Ga0181358_10740113	3300017774	Freshwater Lake	FEGRLTKMKLHLKAELSKAKSDRNRKAIRRLTADARKLAKTLKEMRNASAKNCPHCGEKL
Ga0181357_11715894	3300017777	Freshwater Lake	LHLKEELGKAKSDRDRKNMRRLISDARKLNKTLKEMRNANTKLCPHCGEKL
Ga0181346_12819191	3300017780	Freshwater Lake	IFEGRLQKMKLHIKEELDKVKSDRDRKSIRRITADARKLNRTLKEMRNASAKKCPHCGEK
Ga0181348_11121371	3300017784	Freshwater Lake	ELSKAKGERNRKLIKSQLADAKKLNRTLKEMRNANTKLCPHCGEKL
Ga0181348_11352071	3300017784	Freshwater Lake	IKEELDKVKSDRDRKSIRRITADARKLNKTLKEMRNASAKKCPHCGEKL
Ga0181348_13048591	3300017784	Freshwater Lake	SKAKHQRDKTSIRRQLVAARKLNKTLKEARKVNVKRCPHCGEKL
Ga0211733_109094481	3300020160	Freshwater	DRKAIRRIIADARKLNKTLKEMRNANTKLCPHCGEKL
Ga0211726_110145601	3300020161	Freshwater	KEELGKAKHDRDRKAIRRITADARKLNRTLKEMRNVNTKLCPHCGEKL
Ga0211729_111927254	3300020172	Freshwater	GRLQKMKLHLKEELGKAKSDRDRKSIRRITADARKLNRTLKEMRNAAAKKCPHCGEKL
Ga0211729_113143981	3300020172	Freshwater	LHLKEELGKAKHDRDRKSIRRITADARKLNRTLKEMRNVSVKLCPHCGERL
Ga0211729_113181391	3300020172	Freshwater	MKLHLKAELSKAKHERNRKLIKSQLSDAKKLNRTLKEMRNANTRLCPHCGEKL
Ga0211729_113545533	3300020172	Freshwater	EELSKVKSDRDRKAIKRITADARKLNKTLKEMRNASAKKCPHCGEKL
Ga0211731_100158751	3300020205	Freshwater	HLKEELSKAKHDRDRKAIRRFTADARKLNRTLKEMRNASAKKCPHCGEKL
Ga0211731_100638571	3300020205	Freshwater	KSKHERNRKMIKSQLSDARKLNKTLKEMRNANTKRCPHCGEKL
Ga0211731_114417351	3300020205	Freshwater	RDRKSIRRILYDARKLNKTIKEMRNVSTKKCPHCGEKI
Ga0211731_115838521	3300020205	Freshwater	KEELGKAKHERDRKWIKHQLSDAKKLNRTLKEMRNASAKKCPHCGERL
Ga0207909_10205551	3300020572	Freshwater	GRLNKMKLHLKEELGKAKGERNRRLIKSQLADAKKLNKTLKEMRNANTKLCPHCGEKL
Ga0212088_106366613	3300022555	Freshwater Lake Hypolimnion	MKSHLKKELEKSKHERDRKAIRHQLNDARKLNRTLKEMRSLTTKHCPHCGEKI
Ga0244775_1010263410	3300024346	Estuarine	KAIRRITADARKLNKTLKEMRNASVKKCPHCGEKL
Ga0244776_107050943	3300024348	Estuarine	LGKAKHERDRKKIKNQLSDARKLNKTLKEMRNANTKLCPHCGEKL
Ga0209083_12710421	3300025162	Freshwater	KHERDRKAIRHQLNDARKLNRTLKEMRSLTTKHCPHCGEKI
Ga0255104_10097266	3300027146	Freshwater	LKEELTKAKSDRDRKSIRRITADARKLNKSLKEMRNATTKLCPHCGEKL
Ga0255115_10766883	3300027148	Freshwater	DRKAISRIIADARKLNKTLKEMRNANTKLCPHCGEKL
Ga0208554_10446722	3300027212	Estuarine	KMKLHLKAELSKVKHERDKKTIKRIVADARKLNKTLKEMRQVATKLCPHCGEKI
Ga0255138_10677491	3300027333	Freshwater	RDRKAIRRIIADARKLNKTLKEMRNANTKLCPHCGEKL
Ga0208966_10655881	3300027586	Freshwater Lentic	HERNRKWLKSQLRETKALNKTLKEMRNANTKLCPHCGEKL
Ga0255119_10665681	3300027596	Freshwater	LKEELSKAKHDRDRKAIRRIIADARKLNKTLKEMRNANTKLCPHCGEKL
Ga0208974_10540554	3300027608	Freshwater Lentic	DRDRKAIRRIISDARKLNKTLKEMRNANTKLCPHCGEKL
Ga0208133_10252126	3300027631	Estuarine	FEGRLNKMKLHLKEELSKAKGERDRKAIRRITADARKLNKTLKEMRSVTTKLCPHCGEKL
Ga0208133_10972561	3300027631	Estuarine	FEGRLNKMKLHLKEELGKAKSDRNRKLIKSQLADAKKLNRTLKEMRNANTKLCPHCGEKL
Ga0209443_11688741	3300027707	Freshwater Lake	RLNKMKLHLKEELGKAKHDRDRKAIRRITTDARKLNKTLKEMRNANTKLCPHCGEKL
Ga0209770_102631913	3300027769	Freshwater Lake	EELGKAKHDRNRKWIKIQLADARKLNKTLKEMRNASAKKCPHCGEKL
Ga0209770_103737482	3300027769	Freshwater Lake	KAKHDRDRKAIRRITTDARKLNKTLKEMRNANTKLCPHCGEKL
Ga0209107_100410306	3300027797	Freshwater And Sediment	HERDKQAIKRIVVDARKLNKTLKEMRNANTRLCPHCGEKL
Ga0209107_101544662	3300027797	Freshwater And Sediment	KLHLKAELGKAKHDRDRKMIKSQLADAKKLNKTLKEMRNANTKLCPHCGEKL
Ga0209107_102583881	3300027797	Freshwater And Sediment	LNLKEELTKAKHDRDRKALRRIISDARKLNKTLKEMRNANTKLCPHCGEKL
Ga0209107_104266243	3300027797	Freshwater And Sediment	HDRDRKAIRKITADARKLNKTLKEMRNATTKLCPHCGEKL
Ga0209229_103402094	3300027805	Freshwater And Sediment	KLHLKEELTKTKHDRDRKAIRRIISDARKLNKTLKEMRNATTKLCPHCGEKL
Ga0209230_106934971	3300027836	Freshwater And Sediment	FEGRLNKMKLHLKEELGKAKHDRDRKSIRRITADARKLNKTLKEMRNASAKKCPHCGERL
Ga0209230_107160932	3300027836	Freshwater And Sediment	KHERDKKTIKRIVADARKLNKTLKEMRQVATKLCPHCGEKI
Ga0304730_12946011	3300028394	Freshwater Lake	LKAELGKAKHERDRKIIKSHLTDAKKLNRTLKEMRKANTRLCPHCGEKL
Ga0315899_113056491	3300031784	Freshwater	LKEELGKAKHDRDRKAIRRIIADARKLNKTLKEMRNADTKLCPHCGEKL
Ga0315909_104224492	3300031857	Freshwater	RDRKLIKSQLADAKKLNKTLKEMRNANTRLCPHCGEKL
Ga0315906_104798051	3300032050	Freshwater	KAIRRIVYDARKLNKTLKEMRSATAKRCPHCGERL
Ga0315902_101142157	3300032093	Freshwater	LHIKEELTKAKHDRDRKAISRIIADARKLNKTLKEMRNANTKLCPHCGEKL
Ga0334994_0400254_4_165	3300033993	Freshwater	MKLHLKEELTKAKSDRDRKSIRRITTDARKLNKTLKEMRNAATKLCPHCGEKL
Ga0334995_0737024_2_139	3300034062	Freshwater	LGKAKSDRDRKAIRRITTDARKLNKTLKEMRNAAAKQCPHCGEKL
Ga0335001_0407173_606_728	3300034064	Freshwater	HDRDRKSIRRIIADARKLNKTLKEMRNANTKLCPHCGEKL
Ga0335019_0406942_669_830	3300034066	Freshwater	MKLHLKEELTKSKSDRDRKAIRRITTDARKLNKTLKEMRNAATKLCPHCGEKL
Ga0335028_0569767_70_231	3300034071	Freshwater	MKLHLKEELGKAKHDRDRKAIRRITADARKLNKTLKEMRNANTKLCPHCGEKL
Ga0335020_0001115_19124_19276	3300034082	Freshwater	HLKEELGKAKHDRDRKSIRRIIADSRKLNKTLKEMRNATTKLCPHCGEKL
Ga0335020_0277606_586_747	3300034082	Freshwater	MKLHLKEELSKAKHERNRKMIKSHLSDARKLNRTLKEMRKANTKLCPHCGEKL
Ga0335012_0002320_2_136	3300034093	Freshwater	GKAKHDRDRKSIRRIIADSRKLNKTLKEMRNATTKLCPHCGEKL
Ga0335027_0904371_352_501	3300034101	Freshwater	LKEELGKAKSDRDRKSIRRITTDARKLNKTLKEMRNAAAKQCPHCGETL
Ga0335029_0090256_2_133	3300034102	Freshwater	KAKHERDRKKIKNQLSDARKLNKTLKEMRNANTKLCPHCGEKL
Ga0335035_0039400_1_147	3300034105	Freshwater	KEELTKAKHDRDRKAIRRIISDARKLNKTLKEMRNANIKLCPHCGEKL
Ga0335033_0048989_2437_2586	3300034117	Freshwater	LKEELTKAKHDRDRKAIRRIISDARKLNKTLKEMRNANTKLCPHCGEKL
Ga0335033_0477800_56_217	3300034117	Freshwater	MKLHLKEELSKAKGERDRKSIRRIIADARKLNKTLKEMRNANTKLCPHCGEKL
Ga0335054_0325057_771_896	3300034119	Freshwater	KSDRDRKAIRRITTDARKLNKTLKEMRNAATKVCPHCGEKL
Ga0335048_0110367_2_151	3300034356	Freshwater	LKEELGKAKHDRDRKSIRRIIADSRKLNKTLKEMRNATTKLCPHCGEKL
Ga0335048_0441790_467_634	3300034356	Freshwater	NKMKLHLKEELGKAKYDRDRKAIRRITADARKLNKTLKEMRNAATRLCPHCGEKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088895

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences