Metagenome Family F088794

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088794
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	84 residues
Representative Sequence	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVAS
Number of Associated Samples	79
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	44.95 %
% of genes near scaffold ends (potentially truncated)	41.28 %
% of genes from short scaffolds (< 2000 bps)	77.98 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.385 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (24.771 % of family members)
Environment Ontology (ENVO)	Unclassified (37.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.706 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.73% β-sheet: 13.41% Coil/Unstructured: 65.85%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01850	PIN	4.59
PF14659	Phage_int_SAM_3	3.67
PF08843	AbiEii	2.75
PF00589	Phage_integrase	1.83
PF13604	AAA_30	1.83
PF08751	TrwC	1.83
PF00578	AhpC-TSA	1.83
PF00436	SSB	0.92
PF05713	MobC	0.92
PF09339	HTH_IclR	0.92
PF01695	IstB_IS21	0.92
PF02604	PhdYeFM_antitox	0.92
PF04255	DUF433	0.92
PF13463	HTH_27	0.92
PF13508	Acetyltransf_7	0.92
PF13411	MerR_1	0.92
PF02770	Acyl-CoA_dh_M	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	2.75
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.92
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.92
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.92
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.92
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.92
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.92
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
All Organisms	root	All Organisms	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
cellular organisms	root	All Organisms → cellular organisms	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	10.09 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	10.09 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	8.26 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	8.26 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	8.26 %
Blastococcus saxobsidens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002549\|JGI24130J36418_10015499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2389	Open in IMG/M
3300002549\|JGI24130J36418_10024253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1825	Open in IMG/M
3300004092\|Ga0062389_100901047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1067	Open in IMG/M
3300005938\|Ga0066795_10231695	Not Available	548	Open in IMG/M
3300006055\|Ga0097691_1067812	Not Available	1151	Open in IMG/M
3300006638\|Ga0075522_10238515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	903	Open in IMG/M
3300006640\|Ga0075527_10137152	Not Available	688	Open in IMG/M
3300006795\|Ga0075520_1134632	Not Available	1091	Open in IMG/M
3300006795\|Ga0075520_1396196	Not Available	556	Open in IMG/M
3300006864\|Ga0066797_1367951	Not Available	504	Open in IMG/M
3300006949\|Ga0075528_10127558	Not Available	677	Open in IMG/M
3300009029\|Ga0066793_10024178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3335	Open in IMG/M
3300009645\|Ga0116106_1029575	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300009672\|Ga0116215_1423863	Not Available	576	Open in IMG/M
3300009700\|Ga0116217_10277598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1082	Open in IMG/M
3300009824\|Ga0116219_10408920	Not Available	756	Open in IMG/M
3300010379\|Ga0136449_100056038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8747	Open in IMG/M
3300010379\|Ga0136449_103269786	Not Available	624	Open in IMG/M
3300012668\|Ga0157216_10006361	All Organisms → cellular organisms → Bacteria	6697	Open in IMG/M
3300014159\|Ga0181530_10166283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1243	Open in IMG/M
3300014162\|Ga0181538_10637086	Not Available	555	Open in IMG/M
3300014168\|Ga0181534_10147487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1204	Open in IMG/M
3300014169\|Ga0181531_10007478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Blastococcus saxobsidens	6369	Open in IMG/M
3300014200\|Ga0181526_10165361	Not Available	1418	Open in IMG/M
3300014200\|Ga0181526_11016176	Not Available	521	Open in IMG/M
3300014201\|Ga0181537_11182423	Not Available	516	Open in IMG/M
3300014489\|Ga0182018_10009122	All Organisms → cellular organisms → Bacteria	7326	Open in IMG/M
3300014489\|Ga0182018_10256306	Not Available	961	Open in IMG/M
3300014489\|Ga0182018_10737944	Not Available	512	Open in IMG/M
3300014491\|Ga0182014_10001526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30850	Open in IMG/M
3300014492\|Ga0182013_10630865	Not Available	543	Open in IMG/M
3300014493\|Ga0182016_10186533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1354	Open in IMG/M
3300014495\|Ga0182015_10106751	Not Available	1938	Open in IMG/M
3300014495\|Ga0182015_10267713	Not Available	1124	Open in IMG/M
3300014495\|Ga0182015_10495130	Not Available	781	Open in IMG/M
3300014495\|Ga0182015_10715977	Not Available	631	Open in IMG/M
3300014499\|Ga0182012_10100647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2171	Open in IMG/M
3300014501\|Ga0182024_10785325	Not Available	1163	Open in IMG/M
3300014501\|Ga0182024_10892365	Not Available	1072	Open in IMG/M
3300014838\|Ga0182030_10147994	Not Available	2995	Open in IMG/M
3300014838\|Ga0182030_11271876	Not Available	623	Open in IMG/M
3300017946\|Ga0187879_10208879	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300017946\|Ga0187879_10298092	Not Available	896	Open in IMG/M
3300018016\|Ga0187880_1401973	Not Available	573	Open in IMG/M
3300018034\|Ga0187863_10556095	Not Available	644	Open in IMG/M
3300018037\|Ga0187883_10719313	Not Available	522	Open in IMG/M
3300018042\|Ga0187871_10529986	Not Available	652	Open in IMG/M
3300018043\|Ga0187887_10951870	Not Available	508	Open in IMG/M
3300018044\|Ga0187890_10049983	Not Available	2492	Open in IMG/M
3300018044\|Ga0187890_10349423	Not Available	829	Open in IMG/M
3300023090\|Ga0224558_1000614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41386	Open in IMG/M
3300023090\|Ga0224558_1213588	Not Available	573	Open in IMG/M
3300025482\|Ga0208715_1023825	Not Available	1172	Open in IMG/M
3300025484\|Ga0208587_1017725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2315	Open in IMG/M
3300025679\|Ga0207933_1013396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3779	Open in IMG/M
3300025725\|Ga0209638_1034014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2244	Open in IMG/M
3300025725\|Ga0209638_1051395	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300025829\|Ga0209484_10139722	Not Available	581	Open in IMG/M
3300025854\|Ga0209176_10110484	Not Available	659	Open in IMG/M
3300028036\|Ga0265355_1020802	Not Available	567	Open in IMG/M
3300028789\|Ga0302232_10612122	Not Available	535	Open in IMG/M
3300028866\|Ga0302278_10228235	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300029897\|Ga0247036_1010153	All Organisms → cellular organisms → Bacteria	3329	Open in IMG/M
3300029900\|Ga0247048_1048229	Not Available	926	Open in IMG/M
3300029902\|Ga0247058_1059966	Not Available	633	Open in IMG/M
3300029911\|Ga0311361_11014916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	692	Open in IMG/M
3300029917\|Ga0311326_10596239	Not Available	532	Open in IMG/M
3300029939\|Ga0311328_10128311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2064	Open in IMG/M
3300029943\|Ga0311340_10476160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1123	Open in IMG/M
3300029943\|Ga0311340_11450004	Not Available	540	Open in IMG/M
3300029951\|Ga0311371_11002071	Not Available	994	Open in IMG/M
3300029951\|Ga0311371_12397498	Not Available	541	Open in IMG/M
3300029953\|Ga0311343_10810613	Not Available	762	Open in IMG/M
3300029955\|Ga0311342_10014200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10812	Open in IMG/M
3300029999\|Ga0311339_10134182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2950	Open in IMG/M
3300029999\|Ga0311339_10457913	Not Available	1311	Open in IMG/M
3300029999\|Ga0311339_11422641	Not Available	622	Open in IMG/M
3300030007\|Ga0311338_10148117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2800	Open in IMG/M
3300030007\|Ga0311338_10375363	Not Available	1536	Open in IMG/M
3300030007\|Ga0311338_11003888	Not Available	810	Open in IMG/M
3300030013\|Ga0302178_10265594	Not Available	800	Open in IMG/M
3300030020\|Ga0311344_10715673	Not Available	832	Open in IMG/M
3300030051\|Ga0302195_10073694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1792	Open in IMG/M
3300030056\|Ga0302181_10488920	Not Available	520	Open in IMG/M
3300030490\|Ga0302184_10143631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1041	Open in IMG/M
3300030503\|Ga0311370_11514715	Not Available	701	Open in IMG/M
3300030503\|Ga0311370_11676294	Not Available	654	Open in IMG/M
3300030520\|Ga0311372_11085334	Not Available	1043	Open in IMG/M
3300030524\|Ga0311357_11558935	Not Available	557	Open in IMG/M
3300030617\|Ga0311356_11176774	Not Available	707	Open in IMG/M
3300030617\|Ga0311356_12009309	Not Available	511	Open in IMG/M
3300031234\|Ga0302325_10486956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1871	Open in IMG/M
3300031234\|Ga0302325_10908903	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1220	Open in IMG/M
3300031234\|Ga0302325_10952413	Not Available	1182	Open in IMG/M
3300031234\|Ga0302325_12383192	Not Available	636	Open in IMG/M
3300031234\|Ga0302325_12887530	Not Available	560	Open in IMG/M
3300031236\|Ga0302324_100451360	Not Available	1896	Open in IMG/M
3300031258\|Ga0302318_10585284	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300031261\|Ga0302140_10086534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3209	Open in IMG/M
3300031525\|Ga0302326_11477227	Not Available	912	Open in IMG/M
3300031670\|Ga0307374_10019125	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8820	Open in IMG/M
3300031670\|Ga0307374_10156640	Not Available	1752	Open in IMG/M
3300031708\|Ga0310686_116749383	Not Available	564	Open in IMG/M
3300032160\|Ga0311301_10077982	All Organisms → cellular organisms → Bacteria	6853	Open in IMG/M
3300032160\|Ga0311301_10107474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	5391	Open in IMG/M
3300033823\|Ga0334837_002083	All Organisms → cellular organisms → Bacteria	13161	Open in IMG/M
3300033887\|Ga0334790_230671	Not Available	520	Open in IMG/M
3300033888\|Ga0334792_089207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	872	Open in IMG/M
3300033888\|Ga0334792_167801	Not Available	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.82%
Aquatic	Environmental → Aquatic	19.27%
Plants	Host-Associated → Plants	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.37%
Peat	Environmental → Terrestrial → Peat	39.45%
Freshwater	Environmental → Aquatic → Freshwater	19.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	39.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.02%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.51%
Ice	Environmental → Aquatic → Freshwater → Ice	2.75%
Clay	Environmental → Terrestrial → Soil → Clay	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	39.45%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	16.51%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	13.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.26%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	24.77%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	13.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	9.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.42%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	6.42%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.50%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	5.50%
Cryconite	Environmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite	2.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.83%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.92%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025829	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029897	Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-B2b	Environmental	Open in IMG/M
3300029900	Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_U-A2b	Environmental	Open in IMG/M
3300029902	Cryconite microbial communities from ice sheet in Thule, Greenland - THU-2	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24130J36418_100154993	3300002549	Arctic Peat Soil	VTASLVVRATGGIELPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSEKVAS*
JGI24130J36418_100242533	3300002549	Arctic Peat Soil	MIATLIVRAFCGIELPLVCSPAQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLAQMGVPYEIVSSEDVMS*
Ga0062389_1009010473	3300004092	Bog Forest Soil	LPLVCSPSQVAPLLGRSDHAIRDDCGAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVEP*
Ga0066795_102316952	3300005938	Soil	MIATLIVRAFCGIELPLVCSPAQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLAQMGVPYEIVSSEDVTS*
Ga0097691_10678122	3300006055	Arctic Peat Soil	MNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVASETVAS*
Ga0075522_102385151	3300006638	Arctic Peat Soil	RATGGIELPLVCSPSQVDPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLAQMGVPYEIVSSEDVMS*
Ga0075527_101371523	3300006640	Arctic Peat Soil	MIATLIVRAFCGIELPLVCSPAQVAPLLGRSEHATRDDCVAGVIPTLPRAGGSGAHHRIATARLLAQMGVPYEIVSSEDVRS*
Ga0075520_11346322	3300006795	Arctic Peat Soil	MNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYE
Ga0075520_13961961	3300006795	Arctic Peat Soil	TGNVNPDRQGCRMNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSETVAS*
Ga0066797_13679511	3300006864	Soil	HVMIATLIVRAFCGIELPLVCSPAQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLAQMGVPYEIVSSEDVRS*
Ga0075528_101275581	3300006949	Arctic Peat Soil	FCWVLPEPGLVTALQVPIVTASLLVRAIGGIELPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSE*
Ga0066793_100241785	3300009029	Prmafrost Soil	VPLVCSPAQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLAQMGVPYEIVSSEDVRS*
Ga0116106_10295752	3300009645	Peatland	MRIVTPSLVIRATGGIELPLVCSPSQIAPMLGRSDHSIRDDCIAGLIPTLPRASGSGAHHRIATARLFDQIGIPYEIVSSEKVAS*
Ga0116215_14238631	3300009672	Peatlands Soil	IIRATGGIDLPLVSSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVEP*
Ga0116217_102775981	3300009700	Peatlands Soil	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQMGVPYEIVSSEKVTP*
Ga0116219_104089201	3300009824	Peatlands Soil	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCGAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVEP*
Ga0136449_1000560387	3300010379	Peatlands Soil	MTASLIIRATGGIDLPLVSSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQMGVPYEIVSSEKVTP*
Ga0136449_1032697862	3300010379	Peatlands Soil	CRMNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVASETVAS*
Ga0157216_100063618	3300012668	Glacier Forefield Soil	MNAVLFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYQIGIPYEIVASETIAP*
Ga0181530_101662832	3300014159	Bog	MTASLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATVRLLDQIGVPY
Ga0181538_106370861	3300014162	Bog	MNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCAAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEREL*
Ga0181534_101474873	3300014168	Bog	MNACLIIRTTGGILLPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEAEL*
Ga0181531_100074785	3300014169	Bog	MNACLIIRTTGGIHLPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEAEL*
Ga0181526_101653612	3300014200	Bog	MTASLVIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCAAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEREL*
Ga0181526_110161761	3300014200	Bog	IRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEAEL*
Ga0181537_111824231	3300014201	Bog	MNACLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEREL*
Ga0182018_100091223	3300014489	Palsa	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRTGGSGAHHRIATARLLDQIGVPYEIVSSEKVAS*
Ga0182018_102563062	3300014489	Palsa	VDRRTVLLPNVDVIRWRCSMTASLVVRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIG
Ga0182018_107379441	3300014489	Palsa	MTASLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLK
Ga0182014_1000152630	3300014491	Bog	LEAQRAVGSVHDDRTGNVNPDRQGCRMNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVASETVAS*
Ga0182013_106308651	3300014492	Bog	MNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSETVAS*
Ga0182016_101865334	3300014493	Bog	MNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEAEL*
Ga0182015_101067511	3300014495	Palsa	VLPEPDLVTALQVPIVTASLVVRAIGGIELPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSE*
Ga0182015_102677131	3300014495	Palsa	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLAS*
Ga0182015_104951301	3300014495	Palsa	MTASLIIRATGGVELPLVCSPSQIAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVEP*
Ga0182015_107159771	3300014495	Palsa	MNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVTS*
Ga0182012_101006472	3300014499	Bog	MTASLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLKS*
Ga0182024_107853253	3300014501	Permafrost	VLLPNVDAIRWRCSMTASLIVRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVAS*
Ga0182024_108923652	3300014501	Permafrost	NAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSETVAS*
Ga0182030_101479941	3300014838	Bog	LEAQRAVGSVRDDRTGNVNPDRQGCRMNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVASETVAS*
Ga0182030_112718761	3300014838	Bog	GGMELPLVCSPSLVAPLLGRSDHAVRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVTS*
Ga0187879_102088791	3300017946	Peatland	MRIVTPSLVIRATGGIELPLVCSPSQIAPMLGRSDHSIRDDCIAGLIPTLPRASGSGAHHRIATARLFDQIGIPYEIVSSEKVAS
Ga0187879_102980922	3300017946	Peatland	MNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRVATARLLDQIGVPYEIVSSEAEL
Ga0187880_14019732	3300018016	Peatland	MTASLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSDNVTS
Ga0187863_105560953	3300018034	Peatland	MSASLIIRTTGGMELPLVCSPSHVAPLLGRSGHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQMGVPYEIVKSGESG
Ga0187883_107193132	3300018037	Peatland	ELPLVCSPSQVAPLLGRSDHAIRDDCAAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEAEL
Ga0187871_105299862	3300018042	Peatland	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLEP
Ga0187887_109518702	3300018043	Peatland	MNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEREL
Ga0187890_100499833	3300018044	Peatland	VTPSLVIRATGGIELPLVCSPSQIAPMLGRSDHSIRDDCIAGLIPTLPRASGSGAHHRIATARLFDQIGIPYEIVSSEKVAS
Ga0187890_103494231	3300018044	Peatland	MTASLVIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCAAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYE
Ga0224558_100061437	3300023090	Soil	MNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVASETVAS
Ga0224558_12135881	3300023090	Soil	NAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVASETVAS
Ga0208715_10238251	3300025482	Arctic Peat Soil	MNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSETVAS
Ga0208587_10177253	3300025484	Arctic Peat Soil	MIATLIVRAFCGIELPLVCSPAQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLAQMGVPYEIVSSEDVRS
Ga0207933_10133965	3300025679	Arctic Peat Soil	VLSEPGLVTALQVPIVTASLVVRAIGGIELPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLQRAGGSGAHHRIATARLLDQIGIPYEIVSSE
Ga0209638_10340142	3300025725	Arctic Peat Soil	MIATLIVRAFCGIELPLVCSPAQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLAQMGVPYEIVSSEDVMS
Ga0209638_10513952	3300025725	Arctic Peat Soil	VTASLVVRATGGIELPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSEKVAS
Ga0209484_101397221	3300025829	Arctic Peat Soil	RARSGSELAFCWVLPEPGLVTALQVPIVTASLLVRAIGGIELPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSE
Ga0209176_101104841	3300025854	Arctic Peat Soil	PGERPHRRPDVVRHRRSMTASLIIRAGGGIELPLVCSPAQVAPLLGRSEHATRDDCVAGVIPTLPRAGGSGAHHRIATARLLAQMGVPYEIVSSEDVRS
Ga0265355_10208021	3300028036	Rhizosphere	GSALETLEAQRAVGSAHDDRTGDVNPDRQGCRMNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSETVAS
Ga0302232_106121222	3300028789	Palsa	MTASLIIRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQMGVPYEIISSEKVTS
Ga0302278_102282351	3300028866	Bog	LPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLPRAAGSGAHHRIATARLLDQIGIPYEIVSSEKVAS
Ga0247036_10101532	3300029897	Cryconite	MNAVLFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYQIGIPYEIVASETIAP
Ga0247048_10482292	3300029900	Cryconite	DRTGNINPDRQGCRMNAVLFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYQIGIPYEIVASETIAP
Ga0247058_10599661	3300029902	Cryconite	GGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYQIGIPYEIVASETIAP
Ga0311361_110149162	3300029911	Bog	LPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLKS
Ga0311326_105962391	3300029917	Bog	PHHRPDVVRCQRSMTASLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLKS
Ga0311328_101283113	3300029939	Bog	MTASLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVP
Ga0311340_104761601	3300029943	Palsa	RSMNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEAEL
Ga0311340_114500041	3300029943	Palsa	MTASLIIRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQMGVPYEIIS
Ga0311371_110020713	3300029951	Palsa	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSDKVRS
Ga0311371_123974981	3300029951	Palsa	AHSIHRVCRDIRQQPKEPRGKSARSDVLRRRRSMTASLIIRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQMGVPYEIISSEKVTS
Ga0311343_108106131	3300029953	Bog	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDGVAGVIPTLPRAGGSGAHHRIATARLLDQIGVSYEIVSSEKVTS
Ga0311342_100142001	3300029955	Bog	TTPPTPCPRIVTASLVVRAIGGIELPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLPRAAGSGAHHRIATARLLDQIGIPYEIVSSEKVAS
Ga0311339_101341821	3300029999	Palsa	MNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEAEL
Ga0311339_104579132	3300029999	Palsa	VLLPKVDAIRWRCSMTASLIVRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVAS
Ga0311339_114226411	3300029999	Palsa	VVRCQRSMTASLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLKS
Ga0311338_101481175	3300030007	Palsa	SLIIRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQMGVPYEIISSEKVTS
Ga0311338_103753631	3300030007	Palsa	MDHPRSCTQDRAIHGWRSMNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEAEL
Ga0311338_110038881	3300030007	Palsa	MTASLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCIAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLTS
Ga0302178_102655942	3300030013	Palsa	MDHPRSCTQGRAIHGWRSMNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEAEL
Ga0311344_107156731	3300030020	Bog	AVGSVHDDRTGDVNPDRQGCRMNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVSSETVAS
Ga0302195_100736942	3300030051	Bog	LVVRAIGGIELPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLPRAAGSGAHHRIATARLLDQIGIPYEIVSSEKVAS
Ga0302181_104889202	3300030056	Palsa	MTASLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSS
Ga0302184_101436312	3300030490	Palsa	RRPDVVCFQRTMTAPLVIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCIAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLTS
Ga0311370_115147151	3300030503	Palsa	SARADVVQRRRSMTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLEP
Ga0311370_116762941	3300030503	Palsa	SLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLKS
Ga0311372_110853341	3300030520	Palsa	MTASLIIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLKS
Ga0311357_115589351	3300030524	Palsa	LPNVDAIRWRCSMTASLIVRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVAS
Ga0311356_111767742	3300030617	Palsa	VVQLRRSMTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLEP
Ga0311356_120093091	3300030617	Palsa	MNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEEMER
Ga0302325_104869561	3300031234	Palsa	MTAPLVIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCIAGVIPTLPRAGGSGAHHRIATARLLDQMGVPYEIVSSEKLTS
Ga0302325_109089032	3300031234	Palsa	MTASLIIRTTGGIELPLVSTPSLVAPLLGRSDHAIGNDCIAGVIPTLPRAGGSGAHHRIATARLLDQMGFPYEIVSSG
Ga0302325_109524132	3300031234	Palsa	MTAYLIVRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIISSEKVAS
Ga0302325_123831921	3300031234	Palsa	IRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCIAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLTS
Ga0302325_128875302	3300031234	Palsa	SCTQGRAIHGRRSMNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCAAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEREL
Ga0302324_1004513605	3300031236	Palsa	MDHPRSCTQGRAIHGWRSMNACLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYAIVSSEAEL
Ga0302318_105852842	3300031258	Bog	GIELPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLPRAAGSGAHHRIATARLLDQIGIPYEIVSSEKVAS
Ga0302140_100865344	3300031261	Bog	SLVVRAIGGIELPLVCSPSQVAPMLGRSDHSIRDDCVAGLIPTLPRAAGSGAHHRIATARLLDQIGIPYEIVSSEKVAS
Ga0302326_114772271	3300031525	Palsa	MTAPLVIRAIGGIELPLVCSPSQVAPLLGRSDHAIRDDCIAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLTS
Ga0307374_100191255	3300031670	Soil	VTTPAPLVVRTSGIDLPLVASPAQVAPILGRSDRSVRADCETGRIPVLPRSGGSGAHHRIPVAKLLDELGIPYEIVADVVMAS
Ga0307374_101566403	3300031670	Soil	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKLAS
Ga0310686_1167493831	3300031708	Soil	MELPLVCSPSLVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQMGVPYEIVTSCEGGATAAVPKAS
Ga0311301_100779823	3300032160	Peatlands Soil	MTASLIIRATGGIDLPLVSSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQMGVPYEIVSSEKVTP
Ga0311301_101074743	3300032160	Peatlands Soil	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCGAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVEP
Ga0334837_002083_9582_9908	3300033823	Soil	LEAQRAVGSVHDDRTGNVNPDRQGCRMNAALFVRATGGIDLPLVCSPSQVAPLLGRSDHAIRDDCMAGVIPTLPRAGGSGAHHRIATARLLDQIGIPYEIVASETVAS
Ga0334790_230671_206_454	3300033887	Soil	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVAS
Ga0334792_089207_96_344	3300033888	Soil	MTASLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIISSEKVEP
Ga0334792_167801_216_464	3300033888	Soil	MTAPLIIRATGGIELPLVCSPSQVAPLLGRSDHAIRDDCVAGVIPTLPRAGGSGAHHRIATARLLDQIGVPYEIVSSEKVAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088794

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences