Metagenome / Metatranscriptome Family F088694

Basic Information
Family ID	F088694
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	45 residues
Representative Sequence	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQSSS
Number of Associated Samples	88
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.81 %
% of genes near scaffold ends (potentially truncated)	98.17 %
% of genes from short scaffolds (< 2000 bps)	92.66 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Bacteria (60.550 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (63.303 % of family members)
Environment Ontology (ENVO)	Unclassified (71.560 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (61.468 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 31.51% β-sheet: 0.00% Coil/Unstructured: 68.49%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00924	MS_channel	86.24
PF00211	Guanylate_cyc	6.42
PF00582	Usp	6.42
PF00583	Acetyltransf_1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	86.24
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	86.24
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	6.42

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.55 %
Unclassified	root	N/A	39.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.55 %
Unclassified	root	N/A	39.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.55 %
Unclassified	root	N/A	39.45 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.55 %
Unclassified	root	N/A	39.45 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	60.55 %
Unclassified	root	N/A	39.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.92 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.45 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005363\|Ga0008090_15805341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	970	Open in IMG/M
3300005554\|Ga0066661_10364680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	884	Open in IMG/M
3300005764\|Ga0066903_103311276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	870	Open in IMG/M
3300006755\|Ga0079222_10577739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300006914\|Ga0075436_100332051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1094	Open in IMG/M
3300009038\|Ga0099829_11089311	Not Available	662	Open in IMG/M
3300009792\|Ga0126374_10618214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300010043\|Ga0126380_10766840	Not Available	785	Open in IMG/M
3300010154\|Ga0127503_11067114	Not Available	993	Open in IMG/M
3300010358\|Ga0126370_11883813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300010359\|Ga0126376_12449792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300010366\|Ga0126379_10468303	Not Available	1325	Open in IMG/M
3300010376\|Ga0126381_104266873	Not Available	554	Open in IMG/M
3300010398\|Ga0126383_12467405	Not Available	604	Open in IMG/M
3300012285\|Ga0137370_10644095	Not Available	657	Open in IMG/M
3300012357\|Ga0137384_11194298	Not Available	605	Open in IMG/M
3300012359\|Ga0137385_11011048	Not Available	685	Open in IMG/M
3300016270\|Ga0182036_11669742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300016341\|Ga0182035_10261042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1403	Open in IMG/M
3300016357\|Ga0182032_11956884	Not Available	514	Open in IMG/M
3300016371\|Ga0182034_10487419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300016371\|Ga0182034_11749373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300016422\|Ga0182039_10592751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M
3300021086\|Ga0179596_10345256	Not Available	747	Open in IMG/M
3300021180\|Ga0210396_10504283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1058	Open in IMG/M
3300021374\|Ga0213881_10602953	Not Available	500	Open in IMG/M
3300021475\|Ga0210392_10617197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	805	Open in IMG/M
3300021477\|Ga0210398_10087520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2530	Open in IMG/M
3300021560\|Ga0126371_12820762	Not Available	589	Open in IMG/M
3300025916\|Ga0207663_11115456	Not Available	634	Open in IMG/M
3300026550\|Ga0209474_10699732	Not Available	525	Open in IMG/M
3300027096\|Ga0208099_1010430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1227	Open in IMG/M
3300027725\|Ga0209178_1149631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
3300029636\|Ga0222749_10541709	Not Available	633	Open in IMG/M
3300031543\|Ga0318516_10089884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1723	Open in IMG/M
3300031543\|Ga0318516_10402508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300031544\|Ga0318534_10689355	Not Available	577	Open in IMG/M
3300031564\|Ga0318573_10142809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1252	Open in IMG/M
3300031572\|Ga0318515_10170056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1164	Open in IMG/M
3300031572\|Ga0318515_10522189	Not Available	633	Open in IMG/M
3300031640\|Ga0318555_10065148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1873	Open in IMG/M
3300031668\|Ga0318542_10197319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300031668\|Ga0318542_10342535	Not Available	768	Open in IMG/M
3300031681\|Ga0318572_10157232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1315	Open in IMG/M
3300031719\|Ga0306917_10200900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1509	Open in IMG/M
3300031736\|Ga0318501_10040236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2127	Open in IMG/M
3300031736\|Ga0318501_10183042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300031744\|Ga0306918_10234066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1397	Open in IMG/M
3300031748\|Ga0318492_10074212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1633	Open in IMG/M
3300031748\|Ga0318492_10307453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300031751\|Ga0318494_10121385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300031751\|Ga0318494_10164684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1253	Open in IMG/M
3300031751\|Ga0318494_10164877	Not Available	1253	Open in IMG/M
3300031751\|Ga0318494_10545944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300031763\|Ga0318537_10082916	Not Available	1182	Open in IMG/M
3300031764\|Ga0318535_10322846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300031765\|Ga0318554_10014376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4012	Open in IMG/M
3300031768\|Ga0318509_10078278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1747	Open in IMG/M
3300031768\|Ga0318509_10438381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300031768\|Ga0318509_10620866	Not Available	602	Open in IMG/M
3300031770\|Ga0318521_10845275	Not Available	558	Open in IMG/M
3300031771\|Ga0318546_10127339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1698	Open in IMG/M
3300031777\|Ga0318543_10111642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300031778\|Ga0318498_10123436	Not Available	1178	Open in IMG/M
3300031781\|Ga0318547_10866548	Not Available	563	Open in IMG/M
3300031782\|Ga0318552_10074391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1646	Open in IMG/M
3300031782\|Ga0318552_10119450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1312	Open in IMG/M
3300031793\|Ga0318548_10135850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1194	Open in IMG/M
3300031794\|Ga0318503_10057711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1191	Open in IMG/M
3300031794\|Ga0318503_10208145	Not Available	634	Open in IMG/M
3300031796\|Ga0318576_10355397	Not Available	692	Open in IMG/M
3300031799\|Ga0318565_10056592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1830	Open in IMG/M
3300031799\|Ga0318565_10490658	Not Available	593	Open in IMG/M
3300031819\|Ga0318568_10264652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1065	Open in IMG/M
3300031819\|Ga0318568_10324793	Not Available	956	Open in IMG/M
3300031832\|Ga0318499_10014701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2625	Open in IMG/M
3300031832\|Ga0318499_10027747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2022	Open in IMG/M
3300031833\|Ga0310917_10857457	Not Available	612	Open in IMG/M
3300031880\|Ga0318544_10416665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300031894\|Ga0318522_10335850	Not Available	572	Open in IMG/M
3300031897\|Ga0318520_10097289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1646	Open in IMG/M
3300031954\|Ga0306926_10296021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2003	Open in IMG/M
3300031954\|Ga0306926_11392480	Not Available	814	Open in IMG/M
3300031959\|Ga0318530_10050183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1568	Open in IMG/M
3300031962\|Ga0307479_11024943	Not Available	794	Open in IMG/M
3300032001\|Ga0306922_10583189	Not Available	1186	Open in IMG/M
3300032001\|Ga0306922_10618703	Not Available	1146	Open in IMG/M
3300032008\|Ga0318562_10092291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1710	Open in IMG/M
3300032009\|Ga0318563_10143394	Not Available	1279	Open in IMG/M
3300032025\|Ga0318507_10338178	Not Available	655	Open in IMG/M
3300032042\|Ga0318545_10146243	Not Available	839	Open in IMG/M
3300032043\|Ga0318556_10058519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1881	Open in IMG/M
3300032043\|Ga0318556_10179234	Not Available	1099	Open in IMG/M
3300032044\|Ga0318558_10058518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1725	Open in IMG/M
3300032044\|Ga0318558_10082492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1481	Open in IMG/M
3300032051\|Ga0318532_10068295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1236	Open in IMG/M
3300032052\|Ga0318506_10568858	Not Available	502	Open in IMG/M
3300032054\|Ga0318570_10285528	Not Available	750	Open in IMG/M
3300032059\|Ga0318533_11164449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300032063\|Ga0318504_10231563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300032064\|Ga0318510_10442663	Not Available	557	Open in IMG/M
3300032065\|Ga0318513_10396330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	673	Open in IMG/M
3300032067\|Ga0318524_10110364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1369	Open in IMG/M
3300032076\|Ga0306924_10326653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1760	Open in IMG/M
3300032089\|Ga0318525_10004989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5598	Open in IMG/M
3300032898\|Ga0335072_10914838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300033290\|Ga0318519_10070244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1814	Open in IMG/M
3300033290\|Ga0318519_11043670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.17%
Aquatic	Environmental → Aquatic	0.92%
Plants	Host-Associated → Plants	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.25%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.58%
Loam	Environmental → Terrestrial → Soil → Loam	2.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.92%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	76.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	63.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.92%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0008090_158053412	3300005363	Tropical Rainforest Soil	MRRVRSSTWVLLVIFVGTLVLYLWVKPPTPQAAGAGAGTSQQSSS
Ga0066661_103646802	3300005554	Soil	MRRIRTSTWVLLAIFLATLVLYVWVKPPGTAATTRDSPAAAQQKSSPSHTPK
Ga0066903_1033112762	3300005764	Tropical Forest Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPAPGTASDSPA
Ga0079222_105777392	3300006755	Agricultural Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPAPSTASDSPA
Ga0075436_1003320512	3300006914	Populus Rhizosphere	MRRVRTSTWVLLAIFLGTLVLYLLVKPPTPSTSAAGDSAAGQRSASPAPARTH
Ga0099829_110893112	3300009038	Vadose Zone Soil	MRRIRTSTWVLLAIFLGTLVLYLWVKPPAPAALAGNSPAAGQQSDSPSLTLTPSP
Ga0126374_106182141	3300009792	Tropical Forest Soil	MRRVRTSTWVLLAIFLGALALYLWVKPPAPGDSPAAAPRASSAKPA
Ga0126380_107668403	3300010043	Tropical Forest Soil	MRRVRTSTWVLMAVFLGTLVLYAWVKPPSPSASAAGNNTAGQQSASPAPTHTPSPRRTPR
Ga0127503_110671142	3300010154	Soil	MRRVRTSTWVLLAIFVGTLALYLWVKPPTPSAAGDSPATAPQTSAP
Ga0126370_118838132	3300010358	Tropical Forest Soil	MRRVRTSTWILLAVFLGTLVLYAWVKPPNTASDSAAAAQQTSSPTPAPTQTRR
Ga0126376_124497922	3300010359	Tropical Forest Soil	MRRVRTSTWILLAVFLSALVLYAWVKPPESGSASDSPPPAQQSSSPTPAPSH
Ga0126379_104683033	3300010366	Tropical Forest Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGASAGDSSAAQQSSSP
Ga0126381_1042668731	3300010376	Tropical Forest Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGANAGDS
Ga0126383_124674051	3300010398	Tropical Forest Soil	MRRVRTSTWILLAVFLGTLVLYAWVKPPSPASDAAAATPQTVSP
Ga0137370_106440952	3300012285	Vadose Zone Soil	MRRVRTSTWVLLAIFLGTLVLYLWVKPPSPSTAGDSPAAAQQSASPTPTPRSTR
Ga0137384_111942981	3300012357	Vadose Zone Soil	MRRIRTSTWVLLAIFLGTLVLYLWVKPPAPTAHAGSPA
Ga0137385_110110481	3300012359	Vadose Zone Soil	MRRIRTSTWVLLAIFLGTLVLYLWVKPPSHSAATGDSPAGAQQSSSPANTPKPAPRRTPHRSPAPSAT
Ga0164302_101936392	3300012961	Soil	MSHIRAIRTSTWVLLAIFLFTLTLYVLVRPPPAGSPARTQMTPA
Ga0182036_116697421	3300016270	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQSSSPAPTPSHTPR
Ga0182035_102610421	3300016341	Soil	MRRVRSSTWALLVIFVGTLVLYLWVKPPTPQAAGAGAGTSQQSSSPAPD
Ga0182032_119568841	3300016357	Soil	MGRLRTSTWVLVAIFVGTLALYAWVGPPAPSASTSG
Ga0182034_104874191	3300016371	Soil	MGRIRTSTWVLLAVFLGTLVLYLWVKPPPPAAAGASGGTS
Ga0182034_117493731	3300016371	Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGASAGESPAAQQSP
Ga0182039_105927511	3300016422	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTT
Ga0179596_103452561	3300021086	Vadose Zone Soil	MRRIRTSTWVLLAIFLGTLVLYAWVKPPAPTGRAGNS
Ga0210396_105042832	3300021180	Soil	MGRIRTSTWVLLAIFLGTLVLYLMVKPPSPSNDSPAAGQQSSSPAP
Ga0213881_106029531	3300021374	Exposed Rock	MRRIRTSTWVLLAIFLGALTLYVMFPPPAPQAAGDSRVSTQPSATPSP
Ga0210392_106171972	3300021475	Soil	MRRVRTSTWVLVAIFLGTLVLYLWVKPPTPSASAAGDG
Ga0210398_100875201	3300021477	Soil	MRRIRTSTWVLLAIFLGTLALYLMVKPPSPSAAGDSPAATQP
Ga0126371_128207622	3300021560	Tropical Forest Soil	MRRVRTSTWVLLAVFLGALVLYVWVKPPAPSSSGASAATTPQTNSAAPTPARTRR
Ga0207663_111154562	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVRTSTWVLLAIFLGTLVLYLWVKPPTPSTNAAGDSAAA
Ga0209474_106997321	3300026550	Soil	MRRVRTSTWVLLAIFLGTLVLYLWVKPPSPSTSTAGDSPAATQQSA
Ga0208099_10104303	3300027096	Forest Soil	MRRIRTSTWVLLAIFLGTLVLYLMVKPPSPSDVVDSPAA
Ga0209178_11496311	3300027725	Agricultural Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPEPGTASDSPAA
Ga0222749_105417092	3300029636	Soil	MRRIRTSTWVLMAIFLGTLVLYLNVAPPSASSTAGD
Ga0318516_100898843	3300031543	Soil	MGRIRTSTWVLLAVFLGTLVLYLWVKPPPPAAAGASGGTSQESSSPAPNPTP
Ga0318516_104025081	3300031543	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQPSSPA
Ga0318534_106893552	3300031544	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQS
Ga0318573_101428091	3300031564	Soil	MGRIRTSTWVLLAVFLGTLVLYLWVKPPPPDAAGASGGTSQ
Ga0318515_101700561	3300031572	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDS
Ga0318515_105221892	3300031572	Soil	MRRVRTSTWVLVAIFLGTLVLYGWVKPPTPSTSASGDSPASGQQSASQTPTPTPT
Ga0318555_100651481	3300031640	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQSS
Ga0318542_101973192	3300031668	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPT
Ga0318542_103425352	3300031668	Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGASAGDSPAAQQ
Ga0318572_101572323	3300031681	Soil	MRRVRTSTWVLLAVFLGTLALYLWVKPPASSTTGGSRAAAPQTSSPAPAPLH
Ga0306917_102009003	3300031719	Soil	MGRIRTSTWVLLAVFLGTLVLYLWVKPPPPAAAGASGGTSQE
Ga0318501_100402364	3300031736	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQPSSPAPA
Ga0318501_101830421	3300031736	Soil	MRRVRSSTWALLVIFVGTLVLYLWVKPPTPQAAGAGAG
Ga0306918_102340661	3300031744	Soil	MGRIRTSTWVLLAVFLGTLVLYLWVKPPPPAAAGASGGT
Ga0318492_100742123	3300031748	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPATGTASDSQAGTQ
Ga0318492_103074531	3300031748	Soil	MRRVRSSTWALLVIFVGTLVLYLWVKPPTPQAAGAGAGTSQQSSS
Ga0318494_101213851	3300031751	Soil	MRRVRTSTWVLLAVFLGTLALYLWVKPPASSTTGGSRAAAPQTSS
Ga0318494_101646841	3300031751	Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGASAGDSP
Ga0318494_101648773	3300031751	Soil	MRLMRRVRTSTWMLLAIFLGTLVLYLWVKPPAPSSSGASSAAVPQTNSPAPAHTR
Ga0318494_105459441	3300031751	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQPS
Ga0318537_100829162	3300031763	Soil	MRRVRTSTWTLLAVFLGTLVLYTWVKPPAPGTASDSPAGTQQASSPTPTPE
Ga0318535_103228462	3300031764	Soil	MGRIRTSTWVLLAVFLGTLVLYLWVKPPPPDAAGASGGTSQESSSPTPDPSPT
Ga0318554_100143767	3300031765	Soil	MRRVRTSTWVLLAIFLSTLALYLWVKPPPTSAAGDSPTTAQQSSSPAPT
Ga0318509_100782783	3300031768	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQSSS
Ga0318509_104383811	3300031768	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQ
Ga0318509_106208661	3300031768	Soil	MRRVRTSTWVLLAVFLGTLALYLWVKPPASSTTGGSRAAAPQTSSPAPAPLHTPR
Ga0318521_108452752	3300031770	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSP
Ga0318546_101273391	3300031771	Soil	MRRVRSSTWALLVIFVGTLVLYLWVKPPTPQAAGAGAGTSQQSSSPTPD
Ga0318543_101116422	3300031777	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPSATSAAGDS
Ga0318498_101234362	3300031778	Soil	MRLMRRVRTSTWMLLAIFLGTLVLYLWVKPPAPSSSGAS
Ga0318547_108665482	3300031781	Soil	MRRVRSSTWALLVIFVGTLVLYLWVKPPTPQAAGAGAGTSQQSS
Ga0318552_100743911	3300031782	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTGQQSSSPAPAPSH
Ga0318552_101194501	3300031782	Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGASAGDS
Ga0318548_101358503	3300031793	Soil	MGRIRTSTWVLLAVFLGTLVLYLWVKPPPPDAAGASGG
Ga0318503_100577113	3300031794	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQ
Ga0318503_102081452	3300031794	Soil	MRLMRRVRTSTWMLLAIFLGTLVLYLWVKPPAPSS
Ga0318576_103553972	3300031796	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPSAGTASDSPAGTQQASSPTPTPEHTQRP
Ga0318565_100565924	3300031799	Soil	MGRIRTSTWVLLAVFLGTLVLYLWVKPPPPAAAGASGGTSQESSSPAPNPSPT
Ga0318565_104906581	3300031799	Soil	MRRVRTSTWVLLAVFLGTLALYLWVKPPASSTTGDSRAAAPQT
Ga0318568_102646522	3300031819	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQPSSPAPAPSHT
Ga0318568_103247932	3300031819	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPATGTASDSPAGTQQA
Ga0318499_100147014	3300031832	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPAPGTASDSPAAGTQTSSPTPTPSHTK
Ga0318499_100277475	3300031832	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQPSSPATA
Ga0310917_108574572	3300031833	Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGASAGDSPAAQQSPSPTP
Ga0318544_104166651	3300031880	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPATGTASDS
Ga0318522_103358502	3300031894	Soil	MRRVRTSTWVLLAVFLGTLALYLWVKPPETSAASD
Ga0318520_100972891	3300031897	Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGASAGLSPAAQQSPSPTGSVCGGAASA
Ga0306926_102960211	3300031954	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPATGTASDSQAGTQQASSPTP
Ga0306926_113924802	3300031954	Soil	MRRVRTSTWVLVAIFLGTLVLYGWVKPPTPSTSASGDSPASGQQSASQTPTPTPTPSPRA
Ga0318530_100501831	3300031959	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPAPGTAGDSPAAGTQTSSPTPTPSHTKR
Ga0307479_110249431	3300031962	Hardwood Forest Soil	MRRIRTSTWVLLAVFLGTLVLYLWVQPPSAATGDSPAAAQQSSSPAP
Ga0306922_105831891	3300032001	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPATGTASDSPAGTQQASSPTPTPEHTQRPA
Ga0306922_106187032	3300032001	Soil	MRRVRTSTWVLLAVFLGTLVLYTWVKPPAPGAASDSPAPTQQASSPTPTPAHTK
Ga0318562_100922911	3300032008	Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGASAGRRW
Ga0318563_101433942	3300032009	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPATGTASDSQAGTQQASSP
Ga0318507_103381782	3300032025	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPATGTASDSQAGTQQASSPTPT
Ga0318545_101462432	3300032042	Soil	MRRVRTSTWILLAVFLGTLVLYTWVKPPTTGTASDSPAGTQQASSPAPTPEHTQRPAPHR
Ga0318556_100585193	3300032043	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSTAGDSPTPAQQSSSPA
Ga0318556_101792342	3300032043	Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGANAGD
Ga0318558_100585184	3300032044	Soil	MRRVRTSTWVLLAVFLGTLVLYTWVKPPAPGAASDSPAPTQQASSPTPTPA
Ga0318558_100824921	3300032044	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQSSSPAPAPSH
Ga0318532_100682951	3300032051	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPASSTTGDSRAAAPQTSSPAPAPSH
Ga0318506_105688582	3300032052	Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGASAGDSPAAQRPPGRG
Ga0318570_102855282	3300032054	Soil	MRRVRTSTWVLLAVFLGTLALYLWVKPPASSTTGDSRAAAPQTSSPAPAPSH
Ga0318533_111644492	3300032059	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTGQQSSSPAPAPSHTPR
Ga0318504_102315631	3300032063	Soil	MRRVRTSTWVLVAIFLGTLVLYGWVKPPTPSTSASGDSPASGQQSASQT
Ga0318510_104426631	3300032064	Soil	MRLMRRVRTSTWMLLAIFLGTLVLYLWVKPPAPSSSG
Ga0318513_103963302	3300032065	Soil	MRRVRTSTWVLLAIFLSTLALYLWVKPPPTSAAGDS
Ga0318524_101103641	3300032067	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQPSSPAPAPS
Ga0306924_103266533	3300032076	Soil	MRRVRTSTWVLLAVFLGTLALYLWIKPPASSTTGGSRAAAPQTSS
Ga0318525_100049891	3300032089	Soil	MRRVRSSTWALLVIFVGTLVLYLWVKPPTPQAAGAGAGTSQQSSSPAPDPSPTPS
Ga0335072_109148382	3300032898	Soil	MLRRLRRVRVSTWVLLAIFAGTLWVYLLVRPAPTTAD
Ga0318519_100702443	3300033290	Soil	MGRLRTSTWVLMAIFLGTLVLYGWVKPPAPGASAGD
Ga0318519_110436701	3300033290	Soil	MRRVRTSTWVLLAIFLGTLALYLWVKPPPTSAAGDSPTTAQQPSSP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088694

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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