Metagenome Family F088689

Basic Information
Family ID	F088689
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	47 residues
Representative Sequence	LLIQEMRQLGNSSMSQWATHAEERVSKELKEQDPTVRSRKKKR
Number of Associated Samples	98
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.11 %
% of genes near scaffold ends (potentially truncated)	64.22 %
% of genes from short scaffolds (< 2000 bps)	66.97 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Unclassified (67.890 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (10.092 % of family members)
Environment Ontology (ENVO)	Unclassified (22.936 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (23.853 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.93% β-sheet: 0.00% Coil/Unstructured: 45.07%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF06782	UPF0236	14.68
PF00483	NTP_transferase	0.92
PF14331	IcmF-related_N	0.92
PF04055	Radical_SAM	0.92
PF00005	ABC_tran	0.92
PF13472	Lipase_GDSL_2	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
All Organisms	root	All Organisms	32.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
cellular organisms	root	All Organisms → cellular organisms	32.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	11.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	11.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	11.93 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	8.26 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.83 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	11.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.26 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.83 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	11.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.26 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.83 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	11.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.26 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	1.83 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.89 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	11.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.26 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1.83 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003432\|JGI20214J51088_10252888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1222	Open in IMG/M
3300003432\|JGI20214J51088_10544258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	740	Open in IMG/M
3300004067\|Ga0055485_10046512	Not Available	968	Open in IMG/M
3300004779\|Ga0062380_10542463	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005437\|Ga0070710_10296535	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300005445\|Ga0070708_101762922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	575	Open in IMG/M
3300005536\|Ga0070697_102080746	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	508	Open in IMG/M
3300005831\|Ga0074471_10103503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	573	Open in IMG/M
3300005921\|Ga0070766_10834698	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300006031\|Ga0066651_10543359	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300006057\|Ga0075026_100660833	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300006755\|Ga0079222_11283377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	665	Open in IMG/M
3300006806\|Ga0079220_11169467	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300006880\|Ga0075429_101245714	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300006881\|Ga0068865_102118703	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300006893\|Ga0073928_10271820	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300009009\|Ga0105105_10527819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300009156\|Ga0111538_13224720	Not Available	568	Open in IMG/M
3300009167\|Ga0113563_13426236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	537	Open in IMG/M
3300009167\|Ga0113563_13729815	Not Available	516	Open in IMG/M
3300009527\|Ga0114942_1281625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300010341\|Ga0074045_10124720	Not Available	1766	Open in IMG/M
3300010375\|Ga0105239_13335497	Not Available	522	Open in IMG/M
3300010399\|Ga0134127_10524140	Not Available	1201	Open in IMG/M
3300010403\|Ga0134123_10363449	Not Available	1312	Open in IMG/M
3300010403\|Ga0134123_13140828	Not Available	531	Open in IMG/M
3300011414\|Ga0137442_1034941	Not Available	962	Open in IMG/M
3300011439\|Ga0137432_1049095	Not Available	1269	Open in IMG/M
3300012035\|Ga0137445_1105437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	572	Open in IMG/M
3300012212\|Ga0150985_108122097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300012929\|Ga0137404_10968624	Not Available	778	Open in IMG/M
3300012929\|Ga0137404_11150191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	713	Open in IMG/M
3300014165\|Ga0181523_10728319	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	541	Open in IMG/M
3300014319\|Ga0075348_1223430	Not Available	529	Open in IMG/M
3300014490\|Ga0182010_10426491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	726	Open in IMG/M
3300014870\|Ga0180080_1083562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	558	Open in IMG/M
3300015264\|Ga0137403_10826198	Not Available	780	Open in IMG/M
3300017654\|Ga0134069_1145568	Not Available	790	Open in IMG/M
3300018063\|Ga0184637_10324905	Not Available	929	Open in IMG/M
3300018083\|Ga0184628_10644170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	532	Open in IMG/M
3300019882\|Ga0193713_1203424	Not Available	504	Open in IMG/M
3300019999\|Ga0193718_1088527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300021363\|Ga0193699_10073084	Not Available	1356	Open in IMG/M
3300021520\|Ga0194053_10057522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1695	Open in IMG/M
3300025935\|Ga0207709_10695950	Not Available	813	Open in IMG/M
3300026486\|Ga0256820_1013332	Not Available	1100	Open in IMG/M
3300026501\|Ga0256806_1027097	Not Available	994	Open in IMG/M
3300027070\|Ga0208365_1029826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300027831\|Ga0209797_10446019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	520	Open in IMG/M
3300028380\|Ga0268265_10328033	Not Available	1389	Open in IMG/M
3300028380\|Ga0268265_10871696	Not Available	882	Open in IMG/M
3300028556\|Ga0265337_1057244	Not Available	1085	Open in IMG/M
3300029990\|Ga0311336_10383494	Not Available	1176	Open in IMG/M
3300030047\|Ga0302286_10229481	Not Available	935	Open in IMG/M
3300030294\|Ga0311349_10524533	Not Available	1120	Open in IMG/M
3300030294\|Ga0311349_11235595	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	697	Open in IMG/M
3300031232\|Ga0302323_101163338	Not Available	861	Open in IMG/M
3300031236\|Ga0302324_101151897	Not Available	1038	Open in IMG/M
3300031525\|Ga0302326_10633142	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300031711\|Ga0265314_10188062	Not Available	1231	Open in IMG/M
3300031718\|Ga0307474_10292028	Not Available	1255	Open in IMG/M
3300031997\|Ga0315278_11289822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300032143\|Ga0315292_10675004	Not Available	869	Open in IMG/M
3300032163\|Ga0315281_10863411	Not Available	928	Open in IMG/M
3300032164\|Ga0315283_11187809	Not Available	797	Open in IMG/M
3300032164\|Ga0315283_11306512	Not Available	752	Open in IMG/M
3300032256\|Ga0315271_10288042	Not Available	1347	Open in IMG/M
3300032256\|Ga0315271_11745194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	534	Open in IMG/M
3300032275\|Ga0315270_11138912	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	519	Open in IMG/M
3300032893\|Ga0335069_11144147	Not Available	855	Open in IMG/M
3300033412\|Ga0310810_10787538	Not Available	862	Open in IMG/M
3300033418\|Ga0316625_100742889	Not Available	831	Open in IMG/M
3300033483\|Ga0316629_11260075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	593	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.99%
Host-Associated	Host-Associated	10.09%
Engineered	Engineered	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.54%
Aquatic	Environmental → Aquatic	39.45%
Plants	Host-Associated → Plants	10.09%
Wastewater	Engineered → Wastewater	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.28%
Freshwater	Environmental → Aquatic → Freshwater	23.85%
Sediment	Environmental → Aquatic → Sediment	10.09%
Peat	Environmental → Terrestrial → Peat	8.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.42%
Marine	Environmental → Aquatic → Marine	4.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.67%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.92%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.69%
Lake	Environmental → Aquatic → Freshwater → Lake	11.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.26%
Loam	Environmental → Terrestrial → Soil → Loam	7.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.59%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.83%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Strait	Environmental → Aquatic → Marine → Strait	0.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.92%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.51%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	10.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.83%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.92%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.92%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	10.09%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.42%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.75%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.83%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.92%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.92%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.92%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090005	Sediment microbial communities from Lake Washington, Seattle, for Methane and Nitrogen Cycles, original sample replicate 1	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004072	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009448	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Cold Creek Source	Environmental	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010353	AD_USCAca	Engineered	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014319	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014863	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT25_16_10D	Environmental	Open in IMG/M
3300014870	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10D	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019998	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021520	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8m	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300024519 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026486	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR6	Environmental	Open in IMG/M
3300026501	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR4	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
LWSO_07557450	2088090005	Freshwater Sediment	RLILELRQLGNSSMNQWATQAEERVSAELKGQDATVRSRKKKR
deepsgr_00242450	2199352025	Soil	LIHELRQLGSTTMNQWAVQAEERVSAELQAQDVTVRGLXXXR
JGI20214J51088_102528881	3300003432	Wetland	DGPLKTADEIEALLIQELRQLGRTTMHQWATQAEERVSAELQAQDATVRGLKKKR*
JGI20214J51088_105442582	3300003432	Wetland	ADEVEELLIQELRQLGHTSLCQWATQAEARVSNELKGQDPTIRSRKKKR*
Ga0055485_100465122	3300004067	Natural And Restored Wetlands	YNTEGPLKSAGQVEELLIQEMRRLGNTSMHQWATQAEQRVSRELKAQDGTVRSRKKKR*
Ga0055512_101272651	3300004072	Natural And Restored Wetlands	ELLIQELRALGSTSMNDFATQAEARVGDELKGRDATVRSRKKKR*
Ga0062380_105424632	3300004779	Wetland Sediment	LAITRNAAGPLPTADAVEALLIEEMRQLGHATLSQWAIQAEARVGTELQRLDPTVRSRKKKR*
Ga0070710_102965352	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DEVEELLIQEMRQLGNRSMSQWARHAEERVSKELKEQDPTVRSRKKKR*
Ga0070708_1017629221	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	IQEMRQLGHATMSEWATQAEVRVSEELRSQDPSVLSRKKKR*
Ga0070697_1020807462	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VEELLIQEMRRLGHLTLSQWAIQAEERVSTELKSQDPTVRSRKKKR*
Ga0070686_1018231731	3300005544	Switchgrass Rhizosphere	RRLGNATMNQWAAQAEGRVGQELKGQDPTIRNRKKKRRGGVSLD
Ga0074471_101035031	3300005831	Sediment (Intertidal)	LIEALRQLGHESMNQWAAQAEQRVSTELQQQDATVRRRKKKR*
Ga0070766_108346982	3300005921	Soil	DEVEELLIQEMRQLGRTTLQHWATQAEERVSTELQSQDPTVRSRKKKR*
Ga0066651_105433592	3300006031	Soil	EVEELLIQEMRQLGNRSMSQWARHAEERVSKELKEQDPTVRSRKKKR*
Ga0075026_1006608332	3300006057	Watersheds	QNAEGPLKSADEVEGLLIQEMRQLGNTSMREWIGQSEERVSKELREQNPTVRSRKKKR*
Ga0079222_112833772	3300006755	Agricultural Soil	RRLGHSTMSQWATGAEERLSTELQNQDPTVLSRKKKR*
Ga0079220_111694672	3300006806	Agricultural Soil	VEELLIEEMRQLGNSSMSQWATHAEERVSQELKEQDPTVRSRKKKR*
Ga0075425_1006987362	3300006854	Populus Rhizosphere	CLGNTTMNRWAVQAQERVGQELKEQDPSIRSRKKKH*
Ga0075429_1012457141	3300006880	Populus Rhizosphere	LKTADEVEELLIQEMRQLGNTSMHQWATHAEERVSQELKEQDPSVRSRKKKR*
Ga0068865_1021187031	3300006881	Miscanthus Rhizosphere	GPLKSADEVEELLIEEMRRLGNVTLRQWAIQAEERVSNELKSQDPTVRSRKKKH*
Ga0073928_102718203	3300006893	Iron-Sulfur Acid Spring	LLIQEMRQLGNSSMSQWATHAEERVSKELKEQDPTVRSRKKKR*
Ga0105105_105278191	3300009009	Freshwater Sediment	SADEVEELLIQEMRRLGNTSMQQWATQAEQRVSRELKAQDGTVRSRKKKR*
Ga0066709_1008577171	3300009137	Grasslands Soil	ELLIQEVRRLGNITMNQWAAQAEERVGQELKEQDPAIGNRKKKH*
Ga0111538_132247202	3300009156	Populus Rhizosphere	LKTADEVEEFLIQEMRQLGNSSMSQWATHAEERVSKELKEQDPTVRSRKKKR*
Ga0114970_106652901	3300009163	Freshwater Lake	EIEALLIQELRQLGSTTMHQWATQAEERVSAELQAQDATVRGLKKKR*
Ga0113563_134262362	3300009167	Freshwater Wetlands	DEVEELLIQEVRRLGSATMHQWAVGAEERVSTELKSQDPTVRSRKKKR*
Ga0113563_137298151	3300009167	Freshwater Wetlands	VEELLIQELRRLGSTTMHQWASQAEARVSTELQQEDPTVLSRKKKR*
Ga0114940_103287432	3300009448	Groundwater	LIQELRQLGRTTLHQWAAQAEARVSAELQAGDATVRGLKKKR*
Ga0114942_12816251	3300009527	Groundwater	PLKSADEVEWLLIQELRQLGHSTMTEWATEAEARVGDELQRQDATVRSRKKKR*
Ga0074045_101247201	3300010341	Bog Forest Soil	DQIEELLIQEMRLLGNTSMHQWATQAEERVSRELKSQDATVRSRKKKR*
Ga0074044_106103002	3300010343	Bog Forest Soil	MRRLGGATLHHWARQAEERVGAELRRQDPTVRSRKKKR*
Ga0116236_101697723	3300010353	Anaerobic Digestor Sludge	VRQLGHTTMSQWAQGAEERVSQELRGEDATVRSRKKKR*
Ga0105239_133354972	3300010375	Corn Rhizosphere	ELLIKAMRQLGNETMGQWASQAEERVSRELKEQDPTVLARKKKR*
Ga0134127_105241402	3300010399	Terrestrial Soil	LKSADEVEELLIEEMRRLGNVTLRQWAIQAEERVSNELKSQDPTVRSRKKKH*
Ga0134127_130356731	3300010399	Terrestrial Soil	LGQTTMSQWATQAEERVSTELKSQDPTVLSRKKKR*
Ga0134122_103313321	3300010400	Terrestrial Soil	RLGNVTLRQWAIQAEERVSNELKSQDPTVRSRKKKH*
Ga0134123_103634492	3300010403	Terrestrial Soil	VEELLIEEMRRLGQTTMTQWAAQAEERVSTELKSQDPTVLSRKKKH*
Ga0134123_131408281	3300010403	Terrestrial Soil	GPLKTADEEEALLIQEMRRWGNATMNKWASGAEERVSTELKEEDSTIRSRKKKR*
Ga0137442_10349411	3300011414	Soil	ADEVEELLIEEMRRLGNVTLSRWAIQAEERVSTELKSEDPTVRSQKKRR*
Ga0137436_11784662	3300011423	Soil	QELRQLGRSTMNQWATQAEVRVGAELKSQDATVRRLKKKR*
Ga0137432_10490951	3300011439	Soil	LLIQEMRRVGNAAMNQWAVQAEERVGTELKEEDPTLRPRKKKR*
Ga0137445_11054371	3300012035	Soil	DLAHAAEGPLKTADEIESLLIQELRQLGSTTMNQWATQAEERVSAELQAQDATVRGLKKKR*
Ga0150985_1081220972	3300012212	Avena Fatua Rhizosphere	EEMRQLGQVTMTEWAAEAEARVATELQRQDPTVLSRKKKR*
Ga0137404_109686242	3300012929	Vadose Zone Soil	EELLIQEMRLLGRATMSEWATQAEVRVSDELRSQDPTVLSRKKKR*
Ga0137404_111501911	3300012929	Vadose Zone Soil	NTEGPLKTADEVEELLIQEMRQLGNTSMGQWATHAEERVSKELKQQDPSVRSRKKKR*
Ga0137410_101895071	3300012944	Vadose Zone Soil	EEMRRLGQTTMSQWAAQVEERVSTELKSQDPTVLSRKKKH*
Ga0134110_106321921	3300012975	Grasslands Soil	ELRLLGNTSLCQWATQAEARVSDELKGQDPTIRSRKKKR*
Ga0181523_107283192	3300014165	Bog	AYDAEGPLKSADQVEELLIQEMRRLGNTSMHQWAAQAEQRVSRELKAQDGTVRSRKKKR*
Ga0075348_12234301	3300014319	Natural And Restored Wetlands	DIAYNTEGPLKSADQVEELLIQEMRRLVNTSMHQWATQAEQLVSRELKAQDGTVRSRKKKR*
Ga0182010_104264911	3300014490	Fen	TADQVEKLLIQEIRQLGHATMSQWAAQAEQRVSTELKEQDPTVRSRKKKR*
Ga0182024_117909371	3300014501	Permafrost	QEMRQLGSATLHHWAAQAEERVSAELQQQDPTVSSRKKKR*
Ga0180060_10466722	3300014863	Soil	ELRQLGSTTMHQWARQAEERVSGELKGLDPTVRSRKKKR*
Ga0180080_10835621	3300014870	Soil	LAIMSNAEGPLKSADEVEGLLIQEIRRLGNTTMNQWAARAEERAGQDLKAEDPTVRSRKKKR*
Ga0137403_108261981	3300015264	Vadose Zone Soil	VEELLIQEMRLLGRATMSEWATQAEVRVSDELRSQDPTVLSRKKKR*
Ga0134069_11455682	3300017654	Grasslands Soil	EVEGLLIQEMRRLGKTTMNQWASQAEERVVQELKEQDPTIRSRKKKR
Ga0184637_103249051	3300018063	Groundwater Sediment	VEELLIQEMRRVGNAAMNQWAVQAEERVGTELKEKDPTLRPRKKKR
Ga0184628_106441702	3300018083	Groundwater Sediment	EGQLIEALRQLGHESMNQWAARAEQRVSTELQQRDATVRSRKKKR
Ga0193713_12034241	3300019882	Soil	ADEVEELLIQELRQLGNASMNQWATQAEQRVSTELKSQDATVRSRKKKR
Ga0193710_10064641	3300019998	Soil	RWGNVALSQWASQAEERVSTELKRQDSTVRSRKKKR
Ga0193718_10885272	3300019999	Soil	LLVDEMRRLGHSTMKHWATHAEEQVSTELQQQDPTVLSRKKKR
Ga0210377_101538102	3300021090	Groundwater Sediment	LIQQLRQLGHTTMNQWATQAEERVSAELQAQDATVRGLKKKR
Ga0193699_100730842	3300021363	Soil	LELTRNANGPLKSADEVEGLLIQELRQLGNTSMAEWATQAEDRVSNELKGLDATVRSRKKKH
Ga0210386_114120672	3300021406	Soil	LIQEMRQLGNSSMSQWATHAEERVSKELKEQDPSVRSRKKKR
Ga0194053_100575223	3300021520	Anoxic Zone Freshwater	MYKFSHLPADEVEELLIQELRRLGHTSMTQWAQQAEARVSDELTRQDPT
Ga0247676_10705672	3300024249	Soil	LGNSSMSQWATHAEERVSQELKEQDPSVRSRKKKR
Ga0247678_10867382	3300024325	Soil	QLGNSSMSQWAMHAEERVSKELKEQDPTLRSRKKKR
(restricted) Ga0255046_101268321	3300024519	Seawater	LLIQELRRLGNTTLCQWATQAEARVSNELKDQDPTIRSRKKKH
Ga0207653_100541443	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	RCLGNTTMNRWAVQAQERVGQELKEQDPSIRSRKKKR
Ga0207693_108672682	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	QLGNSSMGQWATHAEERVSEELKAQDPSVRSRKKKR
Ga0207709_106959501	3300025935	Miscanthus Rhizosphere	LKSADEVEELLIEEMRRLGNVTLRQWAIQAEERVSNELKSQDPTVRSRKKKH
Ga0256820_10133321	3300026486	Sediment	VEELLIQEMRRLGSTTMHQWANQAEERVTTELRRQDPTVLSRKKKR
Ga0256806_10270972	3300026501	Sediment	GPLKSADQVEELLIQEMRRLGNTSMHQWATQAEQRVSRELKAGDGTVRSRKKKR
Ga0208365_10298262	3300027070	Forest Soil	EELLIQEMRQLGNSSMSQWAAHAEERVSKELKEQDPTVRSRKKKR
Ga0208685_11333552	3300027513	Soil	MRQLGNVTLSQWAIQAEERVSTELKSQDPTVRSRKKKR
Ga0209797_104460192	3300027831	Wetland Sediment	LAITRNAAGPLPTADAVEALLIEEMRQLGHATLSQWAIQAEARVGTELQRLDPTVRSRKKKR
Ga0209450_111189761	3300027885	Freshwater Lake Sediment	LGNTSMNDFATQAEERVGDELKGRDATVRSRKKKR
Ga0265351_10258792	3300028020	Soil	MRQLGNATLTGWAIQAEERVSAELKSQDPSVRRRKKKG
Ga0268265_103280333	3300028380	Switchgrass Rhizosphere	NQEGPLKTADEVEEKLIEEVRQLGHCTMTQWAGIAEQRVSTELRSKDPTVVSRKKKR
Ga0268265_108716961	3300028380	Switchgrass Rhizosphere	LLIQEMRQLGHATMSEWATQAEVRVSEELRSQDPSVLSRKKKR
Ga0265337_10572441	3300028556	Rhizosphere	GPLKTADEVEELLIQEMRQLGNSSMSQWATHAEERVSKELKEQDPTVRSRKKKR
Ga0311347_107412022	3300029923	Fen	LGNTSMHQWATQAEQRVSRELKAQDGTVRSRKKKR
Ga0311336_103834942	3300029990	Fen	IAYNAEGPLKSADQVEELLIQEMRRLGNTSMQQWATQAEQRVSRELKAQDATVRSRKKKR
Ga0302286_102294812	3300030047	Fen	NTEGPLKSADQVEELLVQEMRRLGNTSMHQWATQAEQRVSRELKAQDGTVRSRKKKR
Ga0311349_105245331	3300030294	Fen	EELLVDEMRRLGSITMTQWATQAEERVSTELRSQDSTVLSRKKKR
Ga0311349_112355951	3300030294	Fen	NAEGPLKSADEVEALLIQEVRQLGNATMRQWATQAEERVGNEVKAQDATIRSRKKKR
Ga0302323_1011633381	3300031232	Fen	ADAVEALLIQELRRLGSATMHQWASQAEARVTTELQQQDPTVLSRKKKR
Ga0302324_1011518972	3300031236	Palsa	LKTADEVEALLIEEMRQLGRTTLHQWAIQAEERVSQELKSQDPTVRSRKKKD
Ga0302326_106331423	3300031525	Palsa	RKLGSATIHHWAAEAEERVCAELRQQDPTVLSRKKKR
Ga0265314_101880621	3300031711	Rhizosphere	LKTADEIEGLLIEEMRQLGNTTLGAWAIQAEERVSRELKSQDSTVRSRKKKR
Ga0307474_102920281	3300031718	Hardwood Forest Soil	TADEVEELLIQEMRQLGNSSMSQWATHAEERVSKELKEQDPTVRSRKKKR
Ga0302321_1018795172	3300031726	Fen	LIQELRRLGNTTLCQWATQAEARVSNELKGQDPTLRSRKKKR
Ga0308176_116245912	3300031996	Soil	LGNETMCQWASQAEERVSRELKEQDPTVLSRKKKR
Ga0315278_112898222	3300031997	Sediment	EGLLIQEMRQLGNTSMVEWATQAEERVSNELKGLDATVRSRKKKR
Ga0315277_113070472	3300032118	Sediment	LRRLGNTTLCQWATQAEARVSNELKGQDPTIRSRKKKR
Ga0315292_106750042	3300032143	Sediment	VEALLIQELRQLGNSSMNHWATQAEERVSEELKGQDASVRSRKKKR
Ga0315281_108634112	3300032163	Sediment	IEEMRQLGNTTLCEWATQAEERVSGELRSQDPTVLSRKKKH
Ga0315283_111878092	3300032164	Sediment	ELLIQEMRRLGSTSMHQWATQAEQRVSRELKAQDGTVRSRKKKR
Ga0315283_113065122	3300032164	Sediment	VEGLLIQEMRQLGNTSMREWIGQSEERVSKELKEQNPTVRSRKKKR
Ga0315271_102880422	3300032256	Sediment	TADAVEEQLIEALRQLGHESMNQWAAQAEQRVSTELQQQEATVRSRKKKR
Ga0315271_111327841	3300032256	Sediment	ELLIEKLRQLGNVSMNQWAQQAEARVSQELKAADDTVRSRKKKR
Ga0315271_113163862	3300032256	Sediment	LRQLGNSSMNQWATQAEQRVSDELKAEDATVRSRKKKR
Ga0315271_117451941	3300032256	Sediment	PLKTADQVEELVIEEMRRLGNVTLSQWAIEAEERVSTELRSQDPTVRSRKKKR
Ga0315270_111389122	3300032275	Sediment	GATTGPLKSADEVEALLIQELRQLGNRSMSQWAAHAEERVSKELKEQDPTVRSRKKKR
Ga0335069_111441472	3300032893	Soil	AYNTEGPLKSADQVEELLIQEMRRLGSTSMHQWATQAEQRVSRELKAGDGTVRSRKKKH
Ga0310810_107875382	3300033412	Soil	TADEVEELLIEEMRQLGNSSMSQWATHAEERVSQELKEQDPTVRSRKKKR
Ga0316625_1007428891	3300033418	Soil	GPLKTADEVEELLIEQMRQLGNETMGQWASQAEERVSRELKEQDPTVLSRKKKH
Ga0316629_112600752	3300033483	Soil	VEEQLIETLRQLGHESMNEWAARAEQRVGTELQQQDATVRRRKKKR
Ga0370501_0105897_3_134	3300034195	Untreated Peat Soil	LLIKELRRLGNTTLCQWAKQAEAHVSNELKAQDPTIRSRKKKH
Ga0372943_1184090_20_136	3300034268	Soil	MRQLGNSSMSQWATRAEERVSKELREQDPTVRSRKKKR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters