Metagenome Family F088630

Basic Information
Family ID	F088630
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	51 residues
Representative Sequence	VKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG
Number of Associated Samples	96
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.55 %
% of genes near scaffold ends (potentially truncated)	33.94 %
% of genes from short scaffolds (< 2000 bps)	86.24 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (50.459 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.927 % of family members)
Environment Ontology (ENVO)	Unclassified (36.697 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.624 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 19.61% Coil/Unstructured: 80.39%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00106	adh_short	44.95
PF07978	NIPSNAP	5.50
PF08240	ADH_N	3.67
PF12697	Abhydrolase_6	3.67
PF04248	NTP_transf_9	3.67
PF08241	Methyltransf_11	1.83
PF00561	Abhydrolase_1	1.83
PF02771	Acyl-CoA_dh_N	0.92
PF05402	PqqD	0.92
PF03861	ANTAR	0.92
PF14219	DUF4328	0.92
PF04199	Cyclase	0.92
PF00296	Bac_luciferase	0.92
PF00266	Aminotran_5	0.92
PF05922	Inhibitor_I9	0.92
PF00903	Glyoxalase	0.92
PF00300	His_Phos_1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	3.67
COG1404	Serine protease, subtilisin family	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.92
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.92
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.92
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.46 %
Unclassified	root	N/A	49.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.46 %
Unclassified	root	N/A	49.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.46 %
Unclassified	root	N/A	49.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21.10 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.93 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.67 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.83 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.83 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.83 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.92 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.83 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.92 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.92 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.83 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.92 %
Comamonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918006\|FACEMD_F1OL2UU01DS60S	Not Available	530	Open in IMG/M
2124908007\|FWIRElOz_GKZ9IRQ02I8O85	Not Available	514	Open in IMG/M
2124908008\|FWIREl_GJ4R3DH01AS9Y6	Not Available	533	Open in IMG/M
2228664021\|ICCgaii200_c0289182	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300000956\|JGI10216J12902_101370910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	677	Open in IMG/M
3300000956\|JGI10216J12902_108136701	Not Available	606	Open in IMG/M
3300000956\|JGI10216J12902_111590103	Not Available	1799	Open in IMG/M
3300001661\|JGI12053J15887_10648891	Not Available	502	Open in IMG/M
3300001686\|C688J18823_10492942	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300002568\|C688J35102_120568310	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300002568\|C688J35102_120799582	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300003987\|Ga0055471_10003510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2840	Open in IMG/M
3300003990\|Ga0055455_10146456	Not Available	720	Open in IMG/M
3300004081\|Ga0063454_100005294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2938	Open in IMG/M
3300004114\|Ga0062593_102715690	Not Available	564	Open in IMG/M
3300005184\|Ga0066671_10335540	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300005329\|Ga0070683_102328579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	514	Open in IMG/M
3300005331\|Ga0070670_102227531	Not Available	505	Open in IMG/M
3300005332\|Ga0066388_100071081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3787	Open in IMG/M
3300005332\|Ga0066388_102761753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	897	Open in IMG/M
3300005332\|Ga0066388_104490482	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005337\|Ga0070682_101445251	Not Available	589	Open in IMG/M
3300005338\|Ga0068868_102398955	Not Available	504	Open in IMG/M
3300005353\|Ga0070669_101681713	Not Available	553	Open in IMG/M
3300005436\|Ga0070713_100159639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2011	Open in IMG/M
3300005439\|Ga0070711_101820002	Not Available	534	Open in IMG/M
3300005458\|Ga0070681_10536856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1083	Open in IMG/M
3300005539\|Ga0068853_102025774	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005548\|Ga0070665_102617899	Not Available	505	Open in IMG/M
3300005569\|Ga0066705_10948452	Not Available	510	Open in IMG/M
3300005618\|Ga0068864_101458109	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005764\|Ga0066903_104025171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	788	Open in IMG/M
3300005843\|Ga0068860_101223619	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300005937\|Ga0081455_10776991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	603	Open in IMG/M
3300006046\|Ga0066652_100081059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2562	Open in IMG/M
3300006057\|Ga0075026_100140109	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300006794\|Ga0066658_10200146	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300006881\|Ga0068865_101669211	Not Available	574	Open in IMG/M
3300009094\|Ga0111539_11176133	Not Available	891	Open in IMG/M
3300009098\|Ga0105245_12334287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300009137\|Ga0066709_102711415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300009176\|Ga0105242_10744631	Not Available	964	Open in IMG/M
3300009553\|Ga0105249_11788663	Not Available	687	Open in IMG/M
3300009553\|Ga0105249_13524609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	504	Open in IMG/M
3300009789\|Ga0126307_10012869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	6142	Open in IMG/M
3300009792\|Ga0126374_11343402	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300009870\|Ga0131092_10246189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1803	Open in IMG/M
3300010036\|Ga0126305_10377045	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300010037\|Ga0126304_10912598	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300010375\|Ga0105239_11152209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300010398\|Ga0126383_11321844	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300012208\|Ga0137376_11173931	Not Available	656	Open in IMG/M
3300012212\|Ga0150985_116168214	Not Available	1096	Open in IMG/M
3300012469\|Ga0150984_105017463	Not Available	822	Open in IMG/M
3300012469\|Ga0150984_122906923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1393	Open in IMG/M
3300012955\|Ga0164298_11264310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300012958\|Ga0164299_10645314	Not Available	731	Open in IMG/M
3300012971\|Ga0126369_13072254	Not Available	546	Open in IMG/M
3300012984\|Ga0164309_11360062	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012985\|Ga0164308_10481520	Not Available	1034	Open in IMG/M
3300012988\|Ga0164306_10339899	Not Available	1109	Open in IMG/M
3300012988\|Ga0164306_11594466	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300013306\|Ga0163162_12137795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Comamonas	642	Open in IMG/M
3300014326\|Ga0157380_11363610	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300014326\|Ga0157380_12050330	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300014745\|Ga0157377_11033144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300014968\|Ga0157379_10219761	All Organisms → cellular organisms → Bacteria → Proteobacteria	1721	Open in IMG/M
3300015171\|Ga0167648_1025962	Not Available	1415	Open in IMG/M
3300015371\|Ga0132258_11522794	Not Available	1689	Open in IMG/M
3300015372\|Ga0132256_102984999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300015373\|Ga0132257_104121821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300017974\|Ga0187777_10001585	All Organisms → cellular organisms → Bacteria	14774	Open in IMG/M
3300018469\|Ga0190270_10631591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1050	Open in IMG/M
3300018469\|Ga0190270_11252630	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300018476\|Ga0190274_11621936	Not Available	740	Open in IMG/M
3300018481\|Ga0190271_11789326	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300018482\|Ga0066669_11235756	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300021478\|Ga0210402_10887044	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300025802\|Ga0210111_1075216	Not Available	807	Open in IMG/M
3300025912\|Ga0207707_10989558	Not Available	691	Open in IMG/M
3300025923\|Ga0207681_11340139	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300025925\|Ga0207650_11020650	Not Available	704	Open in IMG/M
3300025931\|Ga0207644_11851186	Not Available	505	Open in IMG/M
3300025934\|Ga0207686_11149357	Not Available	634	Open in IMG/M
3300025936\|Ga0207670_11861633	Not Available	512	Open in IMG/M
3300025961\|Ga0207712_10123096	Not Available	1965	Open in IMG/M
3300026023\|Ga0207677_11594495	Not Available	604	Open in IMG/M
3300026118\|Ga0207675_100954562	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300026118\|Ga0207675_102044153	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300028379\|Ga0268266_12008763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300028558\|Ga0265326_10243083	Not Available	520	Open in IMG/M
3300028802\|Ga0307503_10124910	Not Available	1134	Open in IMG/M
3300028824\|Ga0307310_10503481	Not Available	610	Open in IMG/M
3300028828\|Ga0307312_10954088	Not Available	568	Open in IMG/M
3300031251\|Ga0265327_10491886	Not Available	529	Open in IMG/M
3300031805\|Ga0318497_10657971	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031954\|Ga0306926_11494513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300032205\|Ga0307472_101852025	Not Available	601	Open in IMG/M
3300032261\|Ga0306920_104380654	Not Available	506	Open in IMG/M
3300033550\|Ga0247829_11519953	Not Available	552	Open in IMG/M
3300034384\|Ga0372946_0272472	Not Available	820	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.39%
Host-Associated	Host-Associated	36.70%
Engineered	Engineered	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.72%
Plants	Host-Associated → Plants	36.70%
Aquatic	Environmental → Aquatic	3.67%
Wastewater	Engineered → Wastewater	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.84%
Marine	Environmental → Aquatic → Marine	2.75%
Sediment	Environmental → Aquatic → Sediment	0.92%
Roots	Host-Associated → Plants → Roots	0.92%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.37%
Loam	Environmental → Terrestrial → Soil → Loam	17.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.09%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.59%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.42%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.67%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.92%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918006	Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2+	Environmental	Open in IMG/M
2124908007	Soil microbial communities from sample at FACE Site Metagenome WIR_ElevOz2	Environmental	Open in IMG/M
2124908008	Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015171	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025802	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEMDE_630780	2035918006	Soil	VGVKIEYHCPTHGKVEPDNLGAPVPTCPMIIRREVDGKV
FWIRElOz_09997930	2124908007	Soil	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRRDVDGKVVPETCGQPLTAYMG
FWIREl_02625500	2124908008	Soil	VKIEYHCPTHGKVEPDNEAAAVPTCPMMIRREVDGKVIPETCGQPL
Perma_A_C_01533020	2124908032	Soil	KVEPDNEAAPVPACPKIMRREVDGKVVPETCGQPLTAYMG
ICCgaii200_02891822	2228664021	Soil	THGLVEPEDPDAAVPTCPLTIRREVNGTIVPEPCGQPLTAYLK
JGI10216J12902_1013709103	3300000956	Soil	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
JGI10216J12902_1081367011	3300000956	Soil	VKIEYHCPTHGKVEPDNEAAPVPTCPMIIRREVDGKVVPETCGQPLTAYMG*
JGI10216J12902_1115901032	3300000956	Soil	MSDIEYRCPTHGLVEPEESEAAVPTCPLTIRREVNGVIVPEPCGQPLTAYLK*
C688J14111_100566153	3300001305	Soil	PDNEAAPVPSCPMIIRREVDGKVIPETCGQPLTAYMG*
JGI12053J15887_106488912	3300001661	Forest Soil	MKIEYHCPTHGKVEPDNEAAPVPTCPMIIRREVDGKVVPETCGQPLTAYMG*
C688J18823_104929422	3300001686	Soil	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
C688J35102_1205683102	3300002568	Soil	VVVKIEYHCPTHGKVEPDNLGAPVPTCPMIIRREVDGKVVPETCGQPLTAYMG*
C688J35102_1207995822	3300002568	Soil	VKIEYHCPTHGKVEPDNEAAPVPSCPMIIRREVDGKVIPETCGQPLTAYMG*
Ga0055471_100035101	3300003987	Natural And Restored Wetlands	MSDIEYRCPTHGPVEPENLDAAVPTCPLTIRREVGGTLVPEPCGQPLTAYLK*
Ga0055455_101464562	3300003990	Natural And Restored Wetlands	YHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0063454_1000052941	3300004081	Soil	VGVKIEYHCPTHGKVEPDNEAAPVPSCPMIIRREVDGKVIPETCGQPLTAYMG*
Ga0062593_1027156901	3300004114	Soil	PTHGKVEPDNLGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0066671_103355402	3300005184	Soil	VGVKIEYHCPTHGKVEPDDEGAPVPTCPMMIRREINGKIVPETCGQPLTAYMG*
Ga0070683_1023285792	3300005329	Corn Rhizosphere	VGVKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0070670_1022275311	3300005331	Switchgrass Rhizosphere	VGVKIEYHCPTHGKVEPDDEGAPVPTCPMMIRREIDGKIVPETCGQPLTAYMG*
Ga0066388_1000710812	3300005332	Tropical Forest Soil	MSDIEYRCPTHGLVEPEEPDAAVPTCPLTIRREVDGTIVPEKCGQPLTAYLK*
Ga0066388_1027617532	3300005332	Tropical Forest Soil	VWFARGARAGKPVAVKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
Ga0066388_1044904822	3300005332	Tropical Forest Soil	MSDIEYRCPTHGLVEPEEPDAAVPTCPLTIRREVDGTIVPEPCGQPLTAYLK*
Ga0070682_1004675082	3300005337	Corn Rhizosphere	MDASCRCVASVPAGKPGSVKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
Ga0070682_1014452511	3300005337	Corn Rhizosphere	VKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREVDGKVVPETCGQPLTAY
Ga0068868_1023989552	3300005338	Miscanthus Rhizosphere	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGQIVPETCGQPLTAYMG*
Ga0070669_1016817131	3300005353	Switchgrass Rhizosphere	GVKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0070713_1001596392	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0070711_1018200022	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VSVKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
Ga0070681_105368562	3300005458	Corn Rhizosphere	VWGRPVGVKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0068853_1020257742	3300005539	Corn Rhizosphere	VGVKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPL
Ga0070665_1026178991	3300005548	Switchgrass Rhizosphere	VWFAGGGTAGRPVAVKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0066705_109484521	3300005569	Soil	VGVKIEYHCPTHGKVEPDDEGAPVPTCPMMIRREINGKIVPETC
Ga0068864_1014581093	3300005618	Switchgrass Rhizosphere	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGQIVPETCGQP
Ga0066903_1040251712	3300005764	Tropical Forest Soil	VWFAPGARAGKPVAVKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
Ga0068860_1012236192	3300005843	Switchgrass Rhizosphere	VGVKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0081455_107769912	3300005937	Tabebuia Heterophylla Rhizosphere	VKIEYHCPTHGKVEPDNEAAPVPTCPMIIRREVDGKVIPETCGQPLTAYMG*
Ga0066652_1000810592	3300006046	Soil	MSDIEYRCPTHGLVEPDDPDAAVPTCPLTIRREVDGTIVPEPCGQPLTAYLK*
Ga0075026_1001401092	3300006057	Watersheds	VKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0066658_102001461	3300006794	Soil	GRSMSDIEYRCPTHGLVEPESLDTAVPTCPLTMRRDVNGTVVAEPCGQPLTAYLK*
Ga0068865_1016692113	3300006881	Miscanthus Rhizosphere	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETCGQ
Ga0111539_111761332	3300009094	Populus Rhizosphere	PAGRPVGVKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0105245_123342872	3300009098	Miscanthus Rhizosphere	VDVKIEYHCPTHGKVEPDDPGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0066709_1027114152	3300009137	Grasslands Soil	VGVKIEYHCPTHGKVEPDDVGAPVPTCPMMIRREVDGKIVPETCGQPLTAYMG*
Ga0105242_107446313	3300009176	Miscanthus Rhizosphere	VAKIEYRCPTHGKVEPEDASAAVPVCPMMLRRIVEGEVVVEPCGQPLTAYFE*
Ga0105242_128592722	3300009176	Miscanthus Rhizosphere	AMDASCRCVASVPAGKPGSVKIEYHCPTHGKVEPDNVGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
Ga0105249_117886631	3300009553	Switchgrass Rhizosphere	THGKVEPDNEAAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0105249_135246092	3300009553	Switchgrass Rhizosphere	ADIEYRCPTHGPVEPEDLDAAVPTCPMILRREVGGQVVPEPCGQPLTAYLK*
Ga0126307_100128695	3300009789	Serpentine Soil	VDVKIEYHCPTHGKVEPDNPGAPVPTCPMIIRRDVDGKVVPETCGQPLTAYMG*
Ga0126374_113434022	3300009792	Tropical Forest Soil	VKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKIVPETCGQPLTAYMG*
Ga0131092_102461894	3300009870	Activated Sludge	VKIEYHCPTHGKVEPDNEGAPVPTCPMIIRREVDGKVVPETCGQPLTAYMG*
Ga0126305_103770452	3300010036	Serpentine Soil	VDVKIEYHCPTHGKVEPDNPGAPVPTCPMIIRRDVDGKVVPEICGQPLTAYMG*
Ga0126304_109125983	3300010037	Serpentine Soil	VDVKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQP
Ga0105239_111522092	3300010375	Corn Rhizosphere	MADIEYRCPTHGPVEPEDLDAAVPTCPMILRREVGGQVVPEPCGQPLTAYLK*
Ga0126383_113218442	3300010398	Tropical Forest Soil	MSDIEYRCPTHGLVEPEEPDAAVPTCPLTIRREVDGTLVPEPCGQPLTAYLK*
Ga0137376_111739312	3300012208	Vadose Zone Soil	MPDIEYRCPTHGPVEPEHPDAAVPTCPMILRREVGGTVVPEPCGQPLTAYLK*
Ga0150985_1161682141	3300012212	Avena Fatua Rhizosphere	HCPTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
Ga0150984_1050174631	3300012469	Avena Fatua Rhizosphere	EYHCPTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
Ga0150984_1229069231	3300012469	Avena Fatua Rhizosphere	SIEYHCPTHGKVEPDNEAAPVLSCPMIIRREVDGKVIPETCGQPLTAYMG*
Ga0164298_112643102	3300012955	Soil	MKIEYHCPTHGKVEPDNEGAPVTTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0164299_106453142	3300012958	Soil	HGPVEPDDLDAPVPTCPMILRREVGGTVVPEPCGQPLTAYLK*
Ga0126369_130722541	3300012971	Tropical Forest Soil	GAAAGRPGVVKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG
Ga0164309_113600622	3300012984	Soil	VKIEYHCPTHGKVEPDNLGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
Ga0164308_104815202	3300012985	Soil	VKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
Ga0164306_103398992	3300012988	Soil	GAGRPVGVKIEYHCPTHGKVEPDDVGAPVPTCPMMIRREIDGKIVPETCGQPLTAYMG*
Ga0164306_115944661	3300012988	Soil	VKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG*
Ga0163162_121377951	3300013306	Switchgrass Rhizosphere	VGVKIEYHCHTHGKGEPDDEGAPVPTCPMMIRREIDGKIGPETCGQPLTAYMG*
Ga0163163_118255591	3300014325	Switchgrass Rhizosphere	NEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG*
Ga0157380_113636102	3300014326	Switchgrass Rhizosphere	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVAETCGQPLTAYMG*
Ga0157380_120503302	3300014326	Switchgrass Rhizosphere	VAVKIEYHCPTHGKVDPDDVSAPVPTCPMMIRREIDGKIVPETCAQPLTAYMG*
Ga0157377_110331442	3300014745	Miscanthus Rhizosphere	MKIEYHCRTHGKVEPDNEGAPVPTCPMMIRREVDGQIVPETCGQPLTAYMG*
Ga0157379_102197612	3300014968	Switchgrass Rhizosphere	VKIEYHCPTHGKVEPDDEGAPVPTCPMMIRREIDGKIVPETCGQPLTAYMG*
Ga0167648_10259623	3300015171	Glacier Forefield Soil	MNIEYHCPTHGKVEPDNEAAPVPSCPKIMRREVDGKVVPETCGQPLTAYMG*
Ga0132258_115227942	3300015371	Arabidopsis Rhizosphere	MADIEYRCPTHGPVEPDDLDAPVPTCPMILRREVGGTVVPEPCGQPLTAYLK*
Ga0132256_1029849992	3300015372	Arabidopsis Rhizosphere	MKIEYHCPTHGKVEPDNLGAPVPTCPMMIRREVDGQIVPETCGQPLTAYMG*
Ga0132257_1041218211	3300015373	Arabidopsis Rhizosphere	SVVARSAMADIEYRCPTHGPVEPDDLDAPVPTCPMILRREVGGTVVPEPCGQPLTAYLK*
Ga0187777_1000158511	3300017974	Tropical Peatland	MADIEYRCPTHGPVEPEDGEAAVPTCPLTIRREVNGTIVPEPCGQPLTAYLK
Ga0190270_106315911	3300018469	Soil	VKIEYHCPTHGKVEPDNEAAAVPTCPMIIRREVDGKVVPETCGQPLTAYMG
Ga0190270_112526302	3300018469	Soil	VKIEYHCPTHGKVEPENMGAPVPTCPMMIRREVDGTVVPETCGQPLTAYMG
Ga0190274_116219362	3300018476	Soil	VGVKIEYHCPTHGKVEPDNLAAPVPTCPMIIRREVDGKVVPETCAQPLTAYMG
Ga0190271_117893261	3300018481	Soil	VKIEYHCPTHGKVEPDNEAAPVPTCPMTIRREVDGKVIPETCGQPLTAYMG
Ga0066669_112357562	3300018482	Grasslands Soil	VGVKIEYHCPTHGKVEPDDVGAPVPTCPMMIRREVDGKIVPETCGQPLTAYMG
Ga0210402_108870442	3300021478	Soil	VKIEYHCPTHGKVEPDNEATAVPTCPMMIRREVDGKVIPETCGQPLTAYMG
Ga0210111_10752162	3300025802	Natural And Restored Wetlands	MKIEYHCPTHGKVEPHDEAAPIPTCPKLIRREVEGKVVPETCGQPLTAYMG
Ga0207699_110148972	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VEPDNEAAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG
Ga0207707_109895582	3300025912	Corn Rhizosphere	VGVKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG
Ga0207681_113401392	3300025923	Switchgrass Rhizosphere	VKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREVDGKVVPETCG
Ga0207650_110206501	3300025925	Switchgrass Rhizosphere	PTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG
Ga0207644_118511862	3300025931	Switchgrass Rhizosphere	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETC
Ga0207686_111493572	3300025934	Miscanthus Rhizosphere	VAKIEYRCPTHGKVEPEDASAAVPVCPMMLRRIVEGEVVVEPCGQPLTAYFE
Ga0207670_118616332	3300025936	Switchgrass Rhizosphere	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG
Ga0207712_101230961	3300025961	Switchgrass Rhizosphere	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGKVVPET
Ga0207677_115944952	3300026023	Miscanthus Rhizosphere	MKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREVDGQIVPETCGQPLTAYMG
Ga0207703_113616272	3300026035	Switchgrass Rhizosphere	PDNEAAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG
Ga0207675_1009545622	3300026118	Switchgrass Rhizosphere	MKIEYHCPTHGKVEPDNLGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG
Ga0207675_1020441531	3300026118	Switchgrass Rhizosphere	RPEGVKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG
Ga0268266_120087632	3300028379	Switchgrass Rhizosphere	VSVKIEYHCPTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG
Ga0265326_102430832	3300028558	Rhizosphere	VKIEYHCPTHGKVEPDNVGAPVPTCPMMIRREIDGRVVPETCGQPLTAYMG
Ga0307503_101249103	3300028802	Soil	VKIEYHCPTHGKVEPDNEAAAVPTCPMIIRREVNGKVIPETCGQPLTAYMG
Ga0307310_105034811	3300028824	Soil	PPAAGRPVAVKIEYHCPTHGKVEPDNDAAPVPTCPMIIRREVDGKVIPETCGQPLTAYMG
Ga0307312_109540882	3300028828	Soil	RRFGNVLRAGRPVAVKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREVDGKVVPETCGQPLTAYMG
Ga0265327_104918862	3300031251	Rhizosphere	MRIEYRCPTHGKVEPENEGAAVPTCPMTIRRTVNGELVPETCGQPLTAYMG
Ga0318528_105565451	3300031561	Soil	DPDAAVPTCPLTIRREVDGTLVPEPCGQPLTAYLK
Ga0318497_106579712	3300031805	Soil	VVPRRVMSDIEYRCPTHGLVEPEDPDAAVPTCPLTIRREVDGTLVPEPCGQPLTAYLK
Ga0306926_114945132	3300031954	Soil	VWFARGRTAGKPVAVKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG
Ga0307472_1018520251	3300032205	Hardwood Forest Soil	VKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREVDG
Ga0306920_1043806541	3300032261	Soil	VWFARGRTAGKPVAVKIEYHCPTHGKVEPDNEAAPVPTCPMMIRREIDGKVVPETCGQPL
Ga0247829_115199531	3300033550	Soil	CPTHGKVEPDNEGAPVPTCPMMIRREIDGKVVPETCGQPLTAYMG
Ga0372946_0272472_680_820	3300034384	Soil	HCPTHGKVEPDNEAAPVPTCPMIIRREVDGKVVPETCGQPLTAYMG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088630

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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