Metagenome / Metatranscriptome Family F088567

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088567
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	90 residues
Representative Sequence	MTKKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVQYGKQHPDVQLFLFYAGEKIPEGVVVLL
Number of Associated Samples	89
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.64 %
% of genes near scaffold ends (potentially truncated)	33.94 %
% of genes from short scaffolds (< 2000 bps)	94.50 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.560 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (33.945 % of family members)
Environment Ontology (ENVO)	Unclassified (40.367 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.459 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 32.22% Coil/Unstructured: 47.78%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13650	Asp_protease_2	18.35
PF13975	gag-asp_proteas	6.42
PF03683	UPF0175	2.75
PF07282	OrfB_Zn_ribbon	1.83
PF10049	DUF2283	0.92
PF04255	DUF433	0.92
PF13087	AAA_12	0.92
PF08240	ADH_N	0.92
PF00496	SBP_bac_5	0.92
PF13546	DDE_5	0.92
PF00872	Transposase_mut	0.92
PF02775	TPP_enzyme_C	0.92
PF00571	CBS	0.92
PF12323	HTH_OrfB_IS605	0.92
PF04002	RadC	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	2.75
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.92
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.92
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.56 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.56 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.56 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.44 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	14.68 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	11.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.50 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.67 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.44 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	11.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.50 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.67 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	2.75 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.44 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	13.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	11.93 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.59 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	3.67 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	2.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.44 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	13.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	11.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.59 %
unclassified Fervidibacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria → unclassified Fervidibacteria	3.67 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	2.75 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	2.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.44 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	13.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	11.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.59 %
Fervidibacteria bacterium JGI 0000001-B9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria → unclassified Fervidibacteria → Fervidibacteria bacterium JGI 0000001-B9	3.67 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	2.75 %
Desulfocapsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.44 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	13.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	11.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.59 %
Fervidibacteria bacterium JGI 0000001-B9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria → unclassified Fervidibacteria → Fervidibacteria bacterium JGI 0000001-B9	3.67 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	2.75 %
Desulfocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfocapsa	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.44 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	13.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	11.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.59 %
Fervidibacteria bacterium JGI 0000001-B9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria → unclassified Fervidibacteria → Fervidibacteria bacterium JGI 0000001-B9	3.67 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	2.75 %
unclassified Desulfocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfocapsa → unclassified Desulfocapsa	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.44 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	13.76 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	11.93 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.59 %
Fervidibacteria bacterium JGI 0000001-B9	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria → unclassified Fervidibacteria → Fervidibacteria bacterium JGI 0000001-B9	3.67 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	2.75 %
Desulfocapsa sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfocapsa → unclassified Desulfocapsa → Desulfocapsa sp.	0.92 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c1095089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1023	Open in IMG/M
3300000550\|F24TB_11027593	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300004798\|Ga0058859_10751080	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300005180\|Ga0066685_11016191	Not Available	547	Open in IMG/M
3300005293\|Ga0065715_10959151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria → unclassified Fervidibacteria → Fervidibacteria bacterium JGI 0000001-B9	557	Open in IMG/M
3300005332\|Ga0066388_102261273	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005332\|Ga0066388_103150121	Not Available	843	Open in IMG/M
3300005340\|Ga0070689_101396309	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria → unclassified Fervidibacteria → Fervidibacteria bacterium JGI 0000001-B9	632	Open in IMG/M
3300005444\|Ga0070694_101153484	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005445\|Ga0070708_101720337	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005471\|Ga0070698_101568277	Not Available	610	Open in IMG/M
3300005552\|Ga0066701_10179602	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300005617\|Ga0068859_100540197	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300005764\|Ga0066903_101983361	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300005841\|Ga0068863_102002099	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria → unclassified Fervidibacteria → Fervidibacteria bacterium JGI 0000001-B9	589	Open in IMG/M
3300005843\|Ga0068860_100587958	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300006800\|Ga0066660_10430933	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1097	Open in IMG/M
3300006845\|Ga0075421_102193687	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300006846\|Ga0075430_101080724	Not Available	661	Open in IMG/M
3300006854\|Ga0075425_102510011	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria → unclassified Fervidibacteria → Fervidibacteria bacterium JGI 0000001-B9	570	Open in IMG/M
3300007255\|Ga0099791_10105331	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300009012\|Ga0066710_101903070	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	890	Open in IMG/M
3300009038\|Ga0099829_10558973	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	951	Open in IMG/M
3300009038\|Ga0099829_11081614	Not Available	665	Open in IMG/M
3300009088\|Ga0099830_11294797	Not Available	606	Open in IMG/M
3300009090\|Ga0099827_10030338	All Organisms → cellular organisms → Bacteria	3894	Open in IMG/M
3300009090\|Ga0099827_10046266	All Organisms → cellular organisms → Bacteria	3249	Open in IMG/M
3300009090\|Ga0099827_10078106	All Organisms → cellular organisms → Bacteria	2576	Open in IMG/M
3300009090\|Ga0099827_10437274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1121	Open in IMG/M
3300009137\|Ga0066709_102776261	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300009444\|Ga0114945_10421573	Not Available	797	Open in IMG/M
3300009553\|Ga0105249_11270369	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300009691\|Ga0114944_1129056	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300009691\|Ga0114944_1141467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	940	Open in IMG/M
3300009811\|Ga0105084_1050074	Not Available	739	Open in IMG/M
3300009813\|Ga0105057_1113263	Not Available	512	Open in IMG/M
3300009818\|Ga0105072_1103909	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	572	Open in IMG/M
3300009822\|Ga0105066_1082668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	697	Open in IMG/M
3300010041\|Ga0126312_10865904	Not Available	657	Open in IMG/M
3300010046\|Ga0126384_10175074	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300010046\|Ga0126384_10688554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	905	Open in IMG/M
3300010047\|Ga0126382_12082246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfocapsa → unclassified Desulfocapsa → Desulfocapsa sp.	542	Open in IMG/M
3300010336\|Ga0134071_10692471	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	539	Open in IMG/M
3300010358\|Ga0126370_11091303	Not Available	735	Open in IMG/M
3300010359\|Ga0126376_10501272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1124	Open in IMG/M
3300010360\|Ga0126372_10718667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	978	Open in IMG/M
3300010361\|Ga0126378_11368591	Not Available	801	Open in IMG/M
3300010362\|Ga0126377_10723128	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1050	Open in IMG/M
3300010366\|Ga0126379_10869476	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300010366\|Ga0126379_11442327	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	794	Open in IMG/M
3300010398\|Ga0126383_10230971	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300010398\|Ga0126383_11560241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	750	Open in IMG/M
3300011270\|Ga0137391_10574236	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300011270\|Ga0137391_11577517	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	500	Open in IMG/M
3300012096\|Ga0137389_10326079	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300012096\|Ga0137389_10807321	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300012189\|Ga0137388_11830287	Not Available	539	Open in IMG/M
3300012199\|Ga0137383_10767294	Not Available	704	Open in IMG/M
3300012204\|Ga0137374_10182180	All Organisms → cellular organisms → Bacteria → Proteobacteria	1832	Open in IMG/M
3300012206\|Ga0137380_10166024	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	2011	Open in IMG/M
3300012206\|Ga0137380_10939428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	741	Open in IMG/M
3300012206\|Ga0137380_11092160	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	680	Open in IMG/M
3300012207\|Ga0137381_10469158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1098	Open in IMG/M
3300012212\|Ga0150985_100255030	Not Available	629	Open in IMG/M
3300012349\|Ga0137387_10391478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1007	Open in IMG/M
3300012359\|Ga0137385_10492106	Not Available	1038	Open in IMG/M
3300012361\|Ga0137360_10949512	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	742	Open in IMG/M
3300012362\|Ga0137361_10564437	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300012363\|Ga0137390_10201246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1979	Open in IMG/M
3300012469\|Ga0150984_120102315	Not Available	517	Open in IMG/M
3300012532\|Ga0137373_10542556	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300012582\|Ga0137358_10627151	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	720	Open in IMG/M
3300012685\|Ga0137397_11045364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	598	Open in IMG/M
3300012929\|Ga0137404_12076501	Not Available	531	Open in IMG/M
3300012930\|Ga0137407_10526893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1105	Open in IMG/M
3300012948\|Ga0126375_10174808	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300012971\|Ga0126369_10285592	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300012971\|Ga0126369_11871298	Not Available	689	Open in IMG/M
3300015264\|Ga0137403_10498144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1090	Open in IMG/M
3300016319\|Ga0182033_11535601	Not Available	601	Open in IMG/M
3300016422\|Ga0182039_10844734	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	815	Open in IMG/M
3300017997\|Ga0184610_1016084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1959	Open in IMG/M
3300018052\|Ga0184638_1177911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	757	Open in IMG/M
3300018053\|Ga0184626_10082776	All Organisms → cellular organisms → Bacteria → Proteobacteria	1356	Open in IMG/M
3300018078\|Ga0184612_10303757	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	817	Open in IMG/M
3300019259\|Ga0184646_1455405	Not Available	525	Open in IMG/M
3300019259\|Ga0184646_1493140	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	532	Open in IMG/M
3300021086\|Ga0179596_10696999	Not Available	514	Open in IMG/M
3300022563\|Ga0212128_10131579	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300022563\|Ga0212128_10406573	Not Available	842	Open in IMG/M
3300022563\|Ga0212128_10438670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300022563\|Ga0212128_10455948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	786	Open in IMG/M
3300025961\|Ga0207712_11782837	Not Available	551	Open in IMG/M
3300026118\|Ga0207675_101647086	Not Available	662	Open in IMG/M
3300027384\|Ga0209854_1093478	Not Available	537	Open in IMG/M
3300027655\|Ga0209388_1063842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1061	Open in IMG/M
3300027846\|Ga0209180_10733855	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	534	Open in IMG/M
3300027882\|Ga0209590_10069035	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	2029	Open in IMG/M
3300027882\|Ga0209590_10409530	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300027882\|Ga0209590_10471344	Not Available	811	Open in IMG/M
3300027961\|Ga0209853_1096854	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300028380\|Ga0268265_11600764	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	656	Open in IMG/M
3300028536\|Ga0137415_10125900	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300030006\|Ga0299907_10693088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	780	Open in IMG/M
3300030620\|Ga0302046_11061697	Not Available	642	Open in IMG/M
3300031093\|Ga0308197_10404123	Not Available	535	Open in IMG/M
3300031094\|Ga0308199_1082203	Not Available	683	Open in IMG/M
3300032076\|Ga0306924_11420025	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	740	Open in IMG/M
3300032205\|Ga0307472_101843960	Not Available	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.16%
Host-Associated	Host-Associated	12.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.23%
Aquatic	Environmental → Aquatic	11.93%
Plants	Host-Associated → Plants	11.93%
Human	Host-Associated → Human	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.23%
Thermal Springs	Environmental → Aquatic → Thermal Springs	6.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.50%
Sediment	Environmental → Aquatic → Sediment	3.67%
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Digestive System	Host-Associated → Human → Digestive System	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.39%
Loam	Environmental → Terrestrial → Soil → Loam	7.34%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	6.42%
Sand	Environmental → Terrestrial → Soil → Sand	5.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.21%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	6.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.50%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	33.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.76%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	6.42%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.75%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_10950892	2228664022	Soil	MAKKKNATRFPQGVSSLEQIEAQYAGQWVLVEETHWNKNGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL
F24TB_110275931	3300000550	Soil	MAKKKNATRLPQGVSSLEQIEAQYAGQWVLVEETHWNKNGQPLAGRVIAHSQEKETVVETGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0058859_107510801	3300004798	Host-Associated	MLSEQRRQGSKKNGQKKNPTPFPQGVSLLEQIEEQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0066685_110161911	3300005180	Soil	LEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVQYGQKHPDMRLFLFYAGEKIPEGVVILL*
Ga0065715_109591511	3300005293	Miscanthus Rhizosphere	VSLLEQIEEQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0066388_1022612732	3300005332	Tropical Forest Soil	MARKTNITRFPQGVLLLEQIEEQYAGQWVLVEETHWNKRGRPLAGRVIAHSQDKETVVEAGVQYGKQHPNVQLFFFYAGEKIPEGVVVLL*
Ga0066388_1031501212	3300005332	Tropical Forest Soil	MAKKKNSTRLPQGIFSLEQIEEQYAGQWVLVEETLWNKSDQPLAGRVIAHSQEKEIVVEAGVQYGQKHSDVRLFLFYAGEKIPEGIVILL*
Ga0070689_1013963091	3300005340	Switchgrass Rhizosphere	SEQRRQGSKKNGQKKNPTPFPQGVSLLEQIEEQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0070694_1011534842	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKKNATRFPQGVSSLEQIEAQYAGQWVLVEETLWNKRGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0070708_1017203371	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKRNTTRFPQGVFSLEQIEEQYAGQRVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVHYGQKHPDVRLFLF*
Ga0070698_1015682772	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKKNATRFPQGVFTLEQIEEQYAGQWVLVEETLWHKSGRPLAGRVIAHSQEKETVVATGVQYRKQHPNVQLFLFYAGEKIPEGVVVLL*
Ga0066701_101796022	3300005552	Soil	MAKKKNATRFPQGVFALEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVQYGQKHPDMRLFLFYAGEKIPEGVVILL*
Ga0068859_1005401971	3300005617	Switchgrass Rhizosphere	MLSEQRGQGSKKNGQKKNPTPFPQGVSLLEQIEEQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0066903_1019833613	3300005764	Tropical Forest Soil	VFALEQIEAQYAGQWVLVEETFWNKREQPLAGRVIAHSPEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0068863_1020020991	3300005841	Switchgrass Rhizosphere	TPFPQGVSLLEQIEEQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0068860_1005879582	3300005843	Switchgrass Rhizosphere	MAKKKNATRFPQGVSSLEQIEAQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0066660_104309332	3300006800	Soil	MAKKKNATRFPQGIFSLEQIEEQYAGQWVLVEEMLWNKNDRPLAGRVIAHSQEKETVVETGVQYGKRHPDVRLFLFYAGEKIPEGVVILL*
Ga0075421_1021936872	3300006845	Populus Rhizosphere	MAKKKNATRFPQGVFSLEQIEGQYAGQWVLVEETLWNKSGSPLAGRVIAHSQEKETVVETGVQFGQKHPDVRLFLFYAG
Ga0075430_1010807242	3300006846	Populus Rhizosphere	SADRESKKMTKKKNATQFPQGVFSLEQIEEQFANQWVLVEETIWDKGGQPLAGRVVAHSQEKATVVETGVQYGQQYPDVQLFLFYAGEKIPEGVVVLL*
Ga0075425_1025100111	3300006854	Populus Rhizosphere	MARKKNATRFPQGVFSLEQIEAQYAGQWVLVEETLWNRREQPLAGRLIAHSPEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVV
Ga0099791_101053313	3300007255	Vadose Zone Soil	MAKKKNATRFPQGVFALEQIEEQYAGQWVLVEETIWNKSGRPLAGRVIAHSQEKETVVETGVQYGQKHPDVRLFLFYAGEKIPEGVVIVL*
Ga0066710_1019030702	3300009012	Grasslands Soil	VFSLEQIEEQYAGQWVLVEEMIWNKNGQPLAGRVVAHSQEKEALVETGVKYGKKHPDVRLFFFYTGEKIPEGVVILL
Ga0099829_105589731	3300009038	Vadose Zone Soil	MAKKRNATRFPQGVFSLKQIEEQYTSQWVLVEETIWNKSGCPLAGRVIAHSPEKETVVETGVYYGQKHPDVRLFLFYAGEKIPE
Ga0099829_110816141	3300009038	Vadose Zone Soil	WADRNSSPLHNGDRGSRKMARKKNATRFPQGVSSLEQIEAQYAGQWVLVEETLWNKRGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0099830_112947971	3300009088	Vadose Zone Soil	GVFSLEQIEEQYTGQWVLVEEMIWNKNGQPLAGRVVAHSEEKETVVETGVQYGKKHPDVRLFFFYAGEKIPEGVVILL*
Ga0099827_100303383	3300009090	Vadose Zone Soil	MAKKRNATRFPQGVFSLKQIEEQYTSQWVLVEETIWNKSGCPLAGRIIAHSQEKETVVETGVHYGNQHPDVRLFLFYAGEKIPEGVVILL*
Ga0099827_100462662	3300009090	Vadose Zone Soil	MAKKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGQVIAHSQEKETVVKTGVQYGKKHPDVRLFLFYAGEKIPEGVVILL*
Ga0099827_100781061	3300009090	Vadose Zone Soil	MAKKKNATRFPQGVFSLEQIEEQYTGQWVLVEEMIWNKNGQPLAGRVVAHSEEKETVVETGVQYGKKHPDVRLFFFYAGEKIPEGVVILL*
Ga0099827_104372744	3300009090	Vadose Zone Soil	MAKKKNASRFPQEVFSLGQIEEQYAGQWVLVEETIWNKSGRPLAGRVIAHSQEKETVVETGVHYGKQHPDVRLFLFYAGEKIPEGVVVLL*
Ga0066709_1027762612	3300009137	Grasslands Soil	VFSLEQIEEQYAGQWVLVEEMIWNKNGQPLAGRVVAHSQEKEAVVETGVKYGKKHPDVRLFFFYTGEKIPEGVVILL*
Ga0114945_104215732	3300009444	Thermal Springs	MAKRKTKTRFPEGVLSIEQIEQEYEGQWVLVEETHWDKKERVLAGRVVAHSLDEETVVEFGIRYGKDHPDARLFLFYAGEKIPEGCVVLL*
Ga0105249_112703692	3300009553	Switchgrass Rhizosphere	HNGDRGARKMAKKKNATRFPQGVSSLEQIEAQYGGQWVLVEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0114944_11290562	3300009691	Thermal Springs	MAKKKNTTRFPSGVCSLEQIEEQYAGQWVLVEETLWNKSGQPLAGRVVAHSQEKETVVETGVQYRKQYPDVQLFLFYAGEKIPEGVVVLL*
Ga0114944_11414672	3300009691	Thermal Springs	DRHSSPLNSGDGRARKMAKKKNATRLPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVHYGKKPPDVRLFLFYAGEKIPEGVVVLL*
Ga0105084_10500742	3300009811	Groundwater Sand	MAKKKNATRFPQGVCSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKEPVVETGVQYGKQHPDVQLFLFYAGEKIPEGVVILL*
Ga0105057_11132632	3300009813	Groundwater Sand	SLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQDKETVVETGVQYGKKHPDGQLFLFYAGEKIPEGVVVLL*
Ga0105072_11039092	3300009818	Groundwater Sand	MAKKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVQYGQKHPDVRLFLFYAGEKIPEGVVIVL*
Ga0105066_10826682	3300009822	Groundwater Sand	MAKKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVHYGKNHPDVQLFLFYAGEKIPE
Ga0126312_108659041	3300010041	Serpentine Soil	MAQKKNATRFPQGVSSLEQIEAQYAGQWVLVEETLWNKRGQPLAGRVIVHSPEKEAVVATGVQYRKQHPEVQLFLFYAGEKIPEGVVVLLGMLVAKATVSLGIEPTVVS*
Ga0126384_101750743	3300010046	Tropical Forest Soil	QGVSSLEQIEAQYAGQWVLVEETHWNKRGRPLAGRVIAHSQEKETVVEAGVQYGKPHPDVQLFLFYAGEKIPEGVVVLL*
Ga0126384_106885541	3300010046	Tropical Forest Soil	MAKKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVVAHSQEKETVVETGVQYRKQHPNVQLFLFYAGEKIPEGVVILL*
Ga0126382_120822462	3300010047	Tropical Forest Soil	MAKKNATRFPQGVFALEQIEAQYAGQWVLVEETFWNKREQPLAGRVIAHSPEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0134071_106924712	3300010336	Grasslands Soil	MAKKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKDTVVETGVQYGKKHPDVRLFLFYAGEKIPEGVVI
Ga0126370_110913032	3300010358	Tropical Forest Soil	MARKKNATRFPQGVSSLEQIEAQYAGQWVLVEETHWNKRGRPLAGRVIAHSQEKETVVETGVQYRKQHPDVLLFLFYAGEKIPEGVVVLLGALVAKATVSLGIEPTVVS*
Ga0126376_105012722	3300010359	Tropical Forest Soil	MTPYAYLFVIGQATGEDKGAGKMAKEKNAARLPEGVFSLAQIEEQYASQWVLVEETLWNKSGQPLAGRVIAHSQEKETVVATGVQYRKQHTNVLLFLFYAGEKIPEGVVVLL*
Ga0126372_107186672	3300010360	Tropical Forest Soil	MAKKKNTTRFPQGVFSLEQIEEQYAGQWVLVEETHWNKRGRPLAGRVIAHSPEKETVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0126378_113685912	3300010361	Tropical Forest Soil	MARKKNVTRFPQGVFSLEQIEAQYAGQWVLVEETLWNKREQPIAGRLIAHSPEKETVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0126377_107231282	3300010362	Tropical Forest Soil	VFSLEQIEEQYAGQWVLVEETLWNKRGRPLAGRVIAHSQEKETVVEAGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0126379_108694762	3300010366	Tropical Forest Soil	SLEQIEAQYAGQWVLVEETLWNKREQPIAGRLIAHSPEKETVVATGVQYRKQHFDVQLFLFYAGEKIPEGVVVLL*
Ga0126379_114423271	3300010366	Tropical Forest Soil	MAKKKNITRFPQGVLLLEQIEEQYAGQWVLVEETHWNKRGRPLAGRVIAHSQDKETVVEAGVQYGKQHPNIQLFFFYAGEKIPEGVVVLL*
Ga0126383_102309712	3300010398	Tropical Forest Soil	MARKKNGTRFPQGVSSLEQIEAQYAGQWVLVEETLWNKREQPLAGRLIAHSPEKEAVVATGVQYRKQHPDMQLFLFYAGEKIPEGVVVLL*
Ga0126383_115602412	3300010398	Tropical Forest Soil	MAKKKNTTRFPQGVFSLEQIEEQYAGQWVLVEETLWNKRGRPLAGRVIAHSQEKETVVETGVQYGQQHPNVQLFLFYAGEKIPEGVIVLL*
Ga0137391_105742362	3300011270	Vadose Zone Soil	MAKKKNASRFPQGVFSLGQIEEQYAGQWVLVEETIWNKSGRPLAGRIIAHSREKETVVETGVHYGKQHPDVRLFLFYAGEKIPEGVVVLL*
Ga0137391_115775171	3300011270	Vadose Zone Soil	MAKKKNVARFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGQVIAHSQEKETVVKTGVQYGKKHPDVRLFLFYAGEKIPE
Ga0137389_103260793	3300012096	Vadose Zone Soil	MAEKKNATRFPHGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGQVIAHSQEKETVVKTGVQYGKKHPDVRLFLFYAGEKIPEGVVILL*
Ga0137389_108073212	3300012096	Vadose Zone Soil	EQIEAQYAGQWVLVEETLWNKRGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0137388_118302871	3300012189	Vadose Zone Soil	MAKKRNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGQVIAHSQEKETVVETGVHYGKKHPDVRLFLFYAGEKIPEGVVILL*
Ga0137383_107672942	3300012199	Vadose Zone Soil	MAKKRNATRFPQGVFSLKQIEEQYTSQWVLVEETIWNKSGCPLAGRVIAHSPEKETVVETGVYYGQKHPDVRLFLFYAGEKIPEGVVILL*
Ga0137374_101821802	3300012204	Vadose Zone Soil	MAKKKNITWFPPGVFSLEQIEEQYASQWVLVEETLWNKSGRPLAGRVVAHSQEKETVVETGVQYGKKHPDVQLFLFYAGEKIPEGVVVLL*
Ga0137380_101660242	3300012206	Vadose Zone Soil	MAKKRNATRFPQGVFSLKQIEEQYTSQWVLVEETIWNKSGCPLAGRVIAHSPEKETVVETGVYYGQKHPDVRLFLFYAGEKIPEGFVILL*
Ga0137380_109394282	3300012206	Vadose Zone Soil	MAKKKNASRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVEIGVHYGQKHPDVRLFLF*
Ga0137380_110921601	3300012206	Vadose Zone Soil	MAKKKNATRFLQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKDTVVETGVQYGKKHPDVRLFLFYAG
Ga0137381_104691582	3300012207	Vadose Zone Soil	MAKKKNASRFPHGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKDTVVETGVQYGKKHPDVRLFLFYAGEKIPEGVVVLL*
Ga0150985_1002550301	3300012212	Avena Fatua Rhizosphere	NGDRGSRKIAKKKNATRFPQGVSSLEQIEAQYAGQWVLIEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0137387_103914782	3300012349	Vadose Zone Soil	MAKKKNATRFPQGVFALEQIEEQYAGQWVLVEETIWNKSGRPLAGRVIAHSQEKETVVETGVQYGQKHPDVRLFLFYAGEKIPEGVVVLL*
Ga0137385_104921062	3300012359	Vadose Zone Soil	MAKKKNASRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGWVIAHSQEKETVVEIGVHYGQKHPDVRLFLF*
Ga0137360_109495121	3300012361	Vadose Zone Soil	MAKKKNASRFPQGVFSLGQIEEQYAGQWVLVEETIWNKSGRPLAGRVIAHSQDKETVVETGVHYGKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0137361_105644373	3300012362	Vadose Zone Soil	MAKKKNATRFPQGVFALEQIEEQYAGQWVLVEETIWNKSGRPLAGRVIAHSQEKETVVETGVQYGQKHPDVRLFLFYAGEKIPEGVVILL*
Ga0137390_102012463	3300012363	Vadose Zone Soil	MAKKKNVARFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGQVIAHSQEKETVVKTGVQYGKKHPDVRLFLFYAGEKIPEGVVILL*
Ga0150984_1201023151	3300012469	Avena Fatua Rhizosphere	MAKKKNTTRLPQGVFSLEQIEEQYVGQWVLVEETLWNKSGRPLAGRVIAHSQEKDTVVETGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0137373_105425563	3300012532	Vadose Zone Soil	GSRKMAKKKNITWFPPGVFSLEQIEEQYASQWVLVEETLWNKSGRPLAGRVVAHSQEKETVVETGVQYGKKHPDVQLFLFYAGEKIPEGVVVLL*
Ga0137358_106271512	3300012582	Vadose Zone Soil	MAKKKNASRFPQGVFSLGQIEEQYAGQWVLVEETVWNKSGRPLAGRVIAHSQDKETVVETGVHYGKQHPDVQLFLFNAGEKIPEGVVVLL*
Ga0137397_110453642	3300012685	Vadose Zone Soil	MAKKKNASRFPQGVFSLEQIEAQYAGQWVLVEETLWNKRGQPLAGRVIAHSQEKEAVVETGVQYGQKHPDVRLFLFYAGE
Ga0137404_120765011	3300012929	Vadose Zone Soil	QLWADRNPSPLNSGDRGLRKMAKKKNASRFPQGVFSLGQIEEQYAGQWVLVEETIWNKSGRPLAGRVIAHSQEKETVVETGVQYGQKHPDIRLFLFYAGEKIPEGVVILL*
Ga0137407_105268932	3300012930	Vadose Zone Soil	MAKKKNATRFPQGVFALEQIEEQYAGQWVLVEETIWNKSGRPLAGRVIAHSQDKETVVETGVHYGQQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0126375_101748082	3300012948	Tropical Forest Soil	MAKKKNTTRFPQGVSSLEQIEAQYAGQWVLVEETHWNKRGRPLAGRVIAHSQEKETVVEAGVQYGKPHPDVQLFLFYAGEKIPEGVVVLL*
Ga0126369_102855923	3300012971	Tropical Forest Soil	MAKKKNATRFPQGVFALEQIEGQYAGQWVLVEETLWNKREQPLAGRLIAHSPEKEAVIATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL*
Ga0126369_118712981	3300012971	Tropical Forest Soil	MTPYAYLFAIGQATGEDRGARKMAKKKNATRLPQGVFSLAQIEEQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKETVVATGVQYRKQHTNVLLFLFYAGEKIPEGVVVLL*
Ga0137403_104981442	3300015264	Vadose Zone Soil	MAKKKNATRFPQGVFALEQIEEQYAGQWVLVEETIWNKSGRPLAGRVIVHSQEKETVVETGVQYGQKHPDVRLFLFYAGEKIPEGVVILL*
Ga0182033_115356011	3300016319	Soil	MAKKKNTTRFPQGVLVLEQIEEQYAGQWVLVEETHWNKRGRPLAGRVIAHSQEKETVVEAGVQYGKQHPNVQLFFFYAGEKIPEGVVVLL
Ga0182039_108447342	3300016422	Soil	MAKKKNTTRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGHPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFY
Ga0184610_10160842	3300017997	Groundwater Sediment	MTKKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVQYGQKHPDVRLFLFYAGEKIPEGVVVLL
Ga0184638_11779112	3300018052	Groundwater Sediment	MTKKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVQYGKQHPDVQLFLFYAGEKIPEGVVVLL
Ga0184626_100827762	3300018053	Groundwater Sediment	MTKKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVVAHSQEKETVVETGIHYGKKHPDVRLFLFYAGEKIPEGVSVLL
Ga0184612_103037572	3300018078	Groundwater Sediment	MTKKKNATQFPQGVFSLEQIEEQYAGQWVLVEETIWHKSGRPLAGRVIAHSQEKETVVETGVHYGQKHPDVQLFLFYAGEKIPEGVVVLLWALVVKATASLDTEPTAAY
Ga0184646_14554051	3300019259	Groundwater Sediment	FSLEHIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVQYGKQHPDVQLFLFYAGEKIPEGVVVLL
Ga0184646_14931402	3300019259	Groundwater Sediment	MTKKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSRDKETVVETGVQYGQKHPDVQLFLFYAGEKIPEGVVVLL
Ga0179596_106969991	3300021086	Vadose Zone Soil	KKKNATRFPQGVSSLEQIEAQYAGQWVLVEETLWNKRGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL
Ga0212128_101315792	3300022563	Thermal Springs	MAKKKNTTRFPSGVCSLEQIEEQYAGQWVLVEETLWNKSGQPLAGRVVAHSQEKETVVATGVQYRKQHPNIQLFLFYAGEKIPEGVVVLL
Ga0212128_104065732	3300022563	Thermal Springs	MAKRKTKTRFPEGVLSIEQIEQEYEGQWVIVEETHWNKQGRALAGRVVAHSRDKETVVETGVQYRKSYPGVRLFLFYAGEKIPEGVAVIL
Ga0212128_104386701	3300022563	Thermal Springs	MAKKKNATRLPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGRVIAHSQEKETVVETGVHYGKKPPDVRLFLFYAGEKIPEGVVVLL
Ga0212128_104559482	3300022563	Thermal Springs	KRKTKTRFPEGVLSIEQIEQQYEGQWVLVEETHWSKKGRALAGRVVTHSLDEESVVEFGIQYRKKHPGVRLFLFYAGEKIPEGCVVLL
Ga0207712_117828372	3300025961	Switchgrass Rhizosphere	MAKKKNATRFPQGVSSLEQIEAQYGGQWVLVEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL
Ga0207675_1016470861	3300026118	Switchgrass Rhizosphere	MLSEQRRQGSKKNGQKKNPTPFPQGVSLLEQIEEQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDIQLFLFYAGEKIPEGVVVLL
Ga0209854_10934782	3300027384	Groundwater Sand	PQGVFSLEQIEEQYAGQWVLVEETLWHKSGRPLAGRVIAHSQEKETVVETGVQYGKQHPDVQLFLFYAGEKIPEGVVVLL
Ga0209388_10638422	3300027655	Vadose Zone Soil	MAKKKNATRFPQGVFALEQIEEQYAGQWVLVEETIWNKSGRPLAGRVIAHSQEKETVVETGVQYGQKHPDVRLFLFYAGEKIPEGVVIVL
Ga0209180_107338551	3300027846	Vadose Zone Soil	MAKKKNVARFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGQVIAHSQEKETVVKTGVQYGKKHPDVRLFLFYAGEKIPEGVVIL
Ga0209590_100690352	3300027882	Vadose Zone Soil	MAKKRNATRFPQGVFSLKQIEEQYTSQWVLVEETIWNKSGCPLAGRIIAHSQEKETVVETGVHYGNQHPDVRLFLFYAGEKIPEGVVILL
Ga0209590_104095301	3300027882	Vadose Zone Soil	TIEKKNATRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGRPLAGQVIAHSQEKETVVKTGVQYGKKHPDVRLFLFYAGEKIPEGVVILL
Ga0209590_104713442	3300027882	Vadose Zone Soil	MAKKKNATRFPQGVFSLEQIEEQYTGQWVLVEEMIWNKNGQPLAGRVVAHSEEKETVVETGVQYGKKHPDVRLFFFYAGEKIPEGVVILL
Ga0209853_10968542	3300027961	Groundwater Sand	MAKKKNATRFPQGVFSLEQIEEQYTGQWVLVEETIWNKSGRPLAGRVIAHSQEKETVVETGVQYGKQHPDVQLFLFYAGEKIPEGVVVLL
Ga0268265_116007641	3300028380	Switchgrass Rhizosphere	MLSEQRRQGSKKNGQKKNPTPFPQGVSLLEQIEEQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL
Ga0137415_101259002	3300028536	Vadose Zone Soil	MAKKKNATRFPQGVSSLEQIEAQYAGQWVLVEETLWNKRGQPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL
Ga0299907_106930881	3300030006	Soil	LEQIEEQYAGQWVLVEETLWNKTGRPLAGRIVAHSREKKTVVETGVQYGKKHPDVQLFLFYAGEKIPEGVVVLL
Ga0302046_110616972	3300030620	Soil	RELRKMARKKNVTRFPQGVSSLEQIEAQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKETVVETGVQYRKQHPDVQLFLFYAGEKIPEGVVVLL
Ga0308197_104041232	3300031093	Soil	VFSLEQIEEQYAGQWVLVEETLWNKSSRPLAGRVIAHSQEKEAVVETGVQYGKQPPDVQLFLFYAGEKIPEGVVVLL
Ga0308199_10822031	3300031094	Soil	MAKKKNALRFPQGVFSLGQIEEQYAGQWVLVEETVWNKSGRPLAGRVIAHSQEKETVVETGVQYGKQHPDVQLFLFYAGEKIPEGVVVLL
Ga0306924_114200251	3300032076	Soil	MAKKKNTTRFPQGVFSLEQIEEQYAGQWVLVEETLWNKSGHPLAGRVIAHSQEKEAVVATGVQYRKQHPDVQLFLFYAGEKIPEGVFVLL
Ga0307472_1018439601	3300032205	Hardwood Forest Soil	WAARNSSPLHNGDRGSRKMAKKKNATRFPQGVSSLEQIEAQYAGQWVLVEETLWNKSGQPLAGRVIAHSQEKETVVATGVQYRKQHPNVQLFLFYAGEKIPEGVVVLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088567

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences