Metagenome / Metatranscriptome Family F088467

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088467
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	133 residues
Representative Sequence	MLKSVCVFFSVLFVAPLVSAEVFKCVGKKGEDLYQNFPCQFESRGGMPTDVADTKKSLTDVTDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDLSELWSYGASRSVRFDSKRRVAAIQQ
Number of Associated Samples	93
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.74 %
% of genes near scaffold ends (potentially truncated)	38.53 %
% of genes from short scaffolds (< 2000 bps)	77.98 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.330 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (15.596 % of family members)
Environment Ontology (ENVO)	Unclassified (27.523 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.028 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 11.45% β-sheet: 17.47% Coil/Unstructured: 71.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF03466	LysR_substrate	8.26
PF13511	DUF4124	6.42
PF00126	HTH_1	5.50
PF02493	MORN	4.59
PF07589	PEP-CTERM	3.67
PF00248	Aldo_ket_red	2.75
PF03401	TctC	0.92
PF08309	LVIVD	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	4.59
COG4642	Uncharacterized conserved protein	Function unknown [S]	4.59
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.92
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.33 %
Unclassified	root	N/A	3.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.33 %
Unclassified	root	N/A	3.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.33 %
Unclassified	root	N/A	3.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.65 %
Unclassified	root	N/A	3.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.83 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	65.14 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.67 %
Unclassified	root	N/A	3.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	65.14 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.67 %
Unclassified	root	N/A	3.67 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	2.75 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	65.14 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.67 %
Unclassified	root	N/A	3.67 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	2.75 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	1.83 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.92 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	65.14 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.67 %
Unclassified	root	N/A	3.67 %
Methylomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	2.75 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1.83 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.92 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	0.92 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	65.14 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.67 %
Unclassified	root	N/A	3.67 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	1.83 %
unclassified Methylomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas	1.83 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.92 %
Methylomonas denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas denitrificans	0.92 %
unclassified Stenotrophomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → unclassified Stenotrophomonas	0.92 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	65.14 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.67 %
Unclassified	root	N/A	3.67 %
Methylomonas sp. LW13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas → Methylomonas sp. LW13	1.83 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	1.83 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.92 %
Stenotrophomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → unclassified Stenotrophomonas → Stenotrophomonas sp.	0.92 %
Methylomonas denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas denitrificans	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004267\|Ga0066396_10004644	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300004463\|Ga0063356_103477018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	678	Open in IMG/M
3300005332\|Ga0066388_104529919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas denitrificans	708	Open in IMG/M
3300005332\|Ga0066388_106389756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas → Methylomonas sp. LW13	594	Open in IMG/M
3300005446\|Ga0066686_10917903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → unclassified Methylomonas → Methylomonas sp. LW13	574	Open in IMG/M
3300005536\|Ga0070697_100322757	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300005536\|Ga0070697_100905529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	783	Open in IMG/M
3300005713\|Ga0066905_100349971	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300005844\|Ga0068862_101279320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	734	Open in IMG/M
3300005981\|Ga0081538_10148466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1066	Open in IMG/M
3300006049\|Ga0075417_10142897	All Organisms → cellular organisms → Bacteria → Proteobacteria	1110	Open in IMG/M
3300006844\|Ga0075428_100268615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1835	Open in IMG/M
3300006845\|Ga0075421_100147102	All Organisms → cellular organisms → Bacteria → Proteobacteria	2945	Open in IMG/M
3300006852\|Ga0075433_11921513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	508	Open in IMG/M
3300006853\|Ga0075420_100027243	All Organisms → cellular organisms → Bacteria	5114	Open in IMG/M
3300006854\|Ga0075425_101718291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → unclassified Stenotrophomonas → Stenotrophomonas sp.	706	Open in IMG/M
3300009012\|Ga0066710_100717198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1526	Open in IMG/M
3300009094\|Ga0111539_10093915	All Organisms → cellular organisms → Bacteria → Proteobacteria	3524	Open in IMG/M
3300009100\|Ga0075418_10690476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1100	Open in IMG/M
3300009157\|Ga0105092_10296878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	911	Open in IMG/M
3300009162\|Ga0075423_10035695	All Organisms → cellular organisms → Bacteria → Proteobacteria	5061	Open in IMG/M
3300009162\|Ga0075423_10664874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1099	Open in IMG/M
3300009792\|Ga0126374_10248115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1160	Open in IMG/M
3300010043\|Ga0126380_10254051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1219	Open in IMG/M
3300010043\|Ga0126380_10715412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	807	Open in IMG/M
3300010043\|Ga0126380_10784730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	777	Open in IMG/M
3300010046\|Ga0126384_10901739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	798	Open in IMG/M
3300010046\|Ga0126384_11278331	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	680	Open in IMG/M
3300010047\|Ga0126382_11997581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	552	Open in IMG/M
3300010358\|Ga0126370_10084714	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300010359\|Ga0126376_12814544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	536	Open in IMG/M
3300010361\|Ga0126378_12882023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	549	Open in IMG/M
3300010362\|Ga0126377_10686065	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	1076	Open in IMG/M
3300010362\|Ga0126377_11456234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	758	Open in IMG/M
3300010366\|Ga0126379_10165476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2083	Open in IMG/M
3300010366\|Ga0126379_11105184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	899	Open in IMG/M
3300010376\|Ga0126381_102627090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	720	Open in IMG/M
3300010398\|Ga0126383_11260565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	829	Open in IMG/M
3300012198\|Ga0137364_10987671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	637	Open in IMG/M
3300012200\|Ga0137382_10048645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2639	Open in IMG/M
3300012205\|Ga0137362_10033412	All Organisms → cellular organisms → Bacteria	4095	Open in IMG/M
3300012212\|Ga0150985_121330919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	724	Open in IMG/M
3300012285\|Ga0137370_10815583	Not Available	578	Open in IMG/M
3300012350\|Ga0137372_10154988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1868	Open in IMG/M
3300012355\|Ga0137369_10469866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	894	Open in IMG/M
3300012532\|Ga0137373_10240899	All Organisms → cellular organisms → Bacteria → Proteobacteria	1465	Open in IMG/M
3300012685\|Ga0137397_10521823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	885	Open in IMG/M
3300012922\|Ga0137394_10081671	All Organisms → cellular organisms → Bacteria	2705	Open in IMG/M
3300012930\|Ga0137407_10625598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1011	Open in IMG/M
3300012931\|Ga0153915_10361836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1634	Open in IMG/M
3300012944\|Ga0137410_10055120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2845	Open in IMG/M
3300012957\|Ga0164303_11223059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	551	Open in IMG/M
3300012972\|Ga0134077_10185900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	842	Open in IMG/M
3300012986\|Ga0164304_11809808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	511	Open in IMG/M
3300013306\|Ga0163162_10102227	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2959	Open in IMG/M
3300013308\|Ga0157375_12896912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	573	Open in IMG/M
3300014154\|Ga0134075_10431526	Not Available	584	Open in IMG/M
3300015358\|Ga0134089_10535240	Not Available	517	Open in IMG/M
3300015372\|Ga0132256_100235083	All Organisms → cellular organisms → Bacteria → Proteobacteria	1895	Open in IMG/M
3300015373\|Ga0132257_100314274	All Organisms → cellular organisms → Bacteria → Proteobacteria	1885	Open in IMG/M
3300015374\|Ga0132255_100940441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1294	Open in IMG/M
3300016319\|Ga0182033_10166625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1719	Open in IMG/M
3300016387\|Ga0182040_10853934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	753	Open in IMG/M
3300016445\|Ga0182038_11905980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	537	Open in IMG/M
3300018028\|Ga0184608_10292957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	716	Open in IMG/M
3300018052\|Ga0184638_1008204	All Organisms → cellular organisms → Bacteria	3483	Open in IMG/M
3300018052\|Ga0184638_1161245	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300018053\|Ga0184626_10015561	All Organisms → cellular organisms → Bacteria	3039	Open in IMG/M
3300018061\|Ga0184619_10164392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1015	Open in IMG/M
3300018072\|Ga0184635_10069398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1374	Open in IMG/M
3300018078\|Ga0184612_10005425	All Organisms → cellular organisms → Bacteria → Proteobacteria	6391	Open in IMG/M
3300018081\|Ga0184625_10108069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1440	Open in IMG/M
3300018081\|Ga0184625_10410421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	697	Open in IMG/M
3300019248\|Ga0180117_1087255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	525	Open in IMG/M
3300019889\|Ga0193743_1038490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2201	Open in IMG/M
3300020060\|Ga0193717_1002621	All Organisms → cellular organisms → Bacteria	10309	Open in IMG/M
3300021560\|Ga0126371_10643692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1209	Open in IMG/M
3300022195\|Ga0222625_1110899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	717	Open in IMG/M
3300022534\|Ga0224452_1040425	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300022756\|Ga0222622_10064766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2126	Open in IMG/M
3300022756\|Ga0222622_10139941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1547	Open in IMG/M
3300025939\|Ga0207665_10940124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	686	Open in IMG/M
3300027909\|Ga0209382_10019708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	8204	Open in IMG/M
3300028380\|Ga0268265_11097348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	790	Open in IMG/M
3300030904\|Ga0308198_1076489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	557	Open in IMG/M
3300030969\|Ga0075394_12006030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	655	Open in IMG/M
3300031114\|Ga0308187_10004408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2402	Open in IMG/M
3300031198\|Ga0307500_10215531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	579	Open in IMG/M
3300031226\|Ga0307497_10175873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	909	Open in IMG/M
3300031231\|Ga0170824_123754797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	766	Open in IMG/M
3300031474\|Ga0170818_103932258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	758	Open in IMG/M
3300031561\|Ga0318528_10671744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	555	Open in IMG/M
3300031720\|Ga0307469_10061821	All Organisms → cellular organisms → Bacteria	2426	Open in IMG/M
3300031720\|Ga0307469_11224690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	710	Open in IMG/M
3300031744\|Ga0306918_11077072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	623	Open in IMG/M
3300031770\|Ga0318521_10653923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	637	Open in IMG/M
3300031879\|Ga0306919_10570854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	873	Open in IMG/M
3300031910\|Ga0306923_10733562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1097	Open in IMG/M
3300031945\|Ga0310913_11079920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	561	Open in IMG/M
3300031947\|Ga0310909_10209722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1621	Open in IMG/M
3300032076\|Ga0306924_10518053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1357	Open in IMG/M
3300032174\|Ga0307470_10040055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2314	Open in IMG/M
3300032180\|Ga0307471_100022363	All Organisms → cellular organisms → Bacteria	4671	Open in IMG/M
3300032180\|Ga0307471_100051511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3400	Open in IMG/M
3300032180\|Ga0307471_100737708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1150	Open in IMG/M
3300032180\|Ga0307471_103990204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	521	Open in IMG/M
3300032205\|Ga0307472_100359264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1200	Open in IMG/M
3300032261\|Ga0306920_100662336	All Organisms → cellular organisms → Bacteria → Proteobacteria	1541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.82%
Host-Associated	Host-Associated	20.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.14%
Plants	Host-Associated → Plants	20.18%
Aquatic	Environmental → Aquatic	14.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.84%
Sediment	Environmental → Aquatic → Sediment	11.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.42%
Freshwater	Environmental → Aquatic → Freshwater	3.67%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.01%
Loam	Environmental → Terrestrial → Soil → Loam	6.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.09%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.92%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066396_100046442	3300004267	Tropical Forest Soil	MLKFAYILFFSVFLVAPPASAEVFKCIGKKGEDLYQNFPCQFESMGGMPRDVADAKKSPTDVASPKKSTIDVPGPKKSPAAPVEPRIGMTTEEVRAIWGEPTDTRWEEPGDGDLSEIWSYGASRSVRFDRKRRVAAIQQ*
Ga0063356_1034770182	3300004463	Arabidopsis Thaliana Rhizosphere	FAPLASAEIFKCVGKKGEALYQNFPCQFESMGGMPMDAAGSKTSTADVRDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDLSEIWSYGASRSVRFDRKRRVAAIQQ*
Ga0066388_1045299191	3300005332	Tropical Forest Soil	MLKAICVLFSVLFFPPLASAEVFKCVGKYGEALYQNFPCQFESTRDIPTDVPDTKKSLTDVADIKKSPTNVAGQKKPPAAPAEPRIGMTTEEVRAIWGEPTDSRWEEPGDGDRSEVWSYGDSRSVRFDSKRRVAAIQQ*
Ga0066388_1063897561	3300005332	Tropical Forest Soil	MFKSFCALLFLLFGVSLASAEVFKCIGKKGEDLYQNFPCEFESRGGMPTDVADTKKSPAAPAEPRIGMTTEEVRAIWGEPTDTFWEEPGDGDLSEVWSYGASRSVRFDRKRRVAAIQQ*
Ga0066686_109179031	3300005446	Soil	VCVLFSILFVAPLASAEIFKCVGKSGEDLYQNFPCQFESIGWVPTDAQDPKKSPAVPTEPRLGAQGPKKSPAVPAEPRVGMTTEEVKAIWGEPTDTVQEEPGDGPRYEVWSYGDSRSVRFDRRGRVTAIQL*
Ga0070697_1003227572	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLKSVCVLFFVLFVAPLASAETFKCVGKYGEALYQNFPCQFESIGSTPMDAQDPKKTPAVPTEPRLGAQGPKKSPAVPAEPRVGMTTEEVKAIWGEPTDTVQEEPGDGPRYEVWSYGASRSVRFDRRGRVTAIQ*
Ga0070697_1009055292	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GKSGEDLYQNFPCQFESRGGMPTDVADTKKSLTDVTDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDLSELWSYGASRSVRFDRKRRVAAIQQ*
Ga0066905_1003499712	3300005713	Tropical Forest Soil	MLKFAYILFFSVFLVAPPASAEVFKCIGKKGEDLYQNFPCEFESMGGMPTDAAGSKTSTADVRDPKKSPTDIAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDLSEIWSYGASGSVRFDRKRRVAAIQQ*
Ga0068862_1012793202	3300005844	Switchgrass Rhizosphere	MLKSLCALFSVLFVAPPAYAEVFKCVGKYGEALYQNFPCQFVSMGGMPTDAPGSKELPADVPSPKKSSTAVSGAKKPPAAPRVGMTNDEVRDIWGEPTEIIEEEPGEGSRFEVWSYGDSRSVRFDRRRHVFSVQK*
Ga0081538_101484661	3300005981	Tabebuia Heterophylla Rhizosphere	MLKSLCVLFSVLLVAPLAFAEVFKCIGKHGEALYQNFPCQFESMGGMPTDVPGPKKSPTDVAGPKKSPAVPAEPRVGMTSDEVRAIWGEPTDTVQEEPGDGGRSEVWSYGPSRSVRFDRKRRVTAVQQ*
Ga0075417_101428971	3300006049	Populus Rhizosphere	RGKLAMLKSVCVFFSVLFVAPLASAEVFKCVGKYGEALYQNFPCQFKSMGWTPMDAQSPKKSPALPAQPDIGMTTEEVKAIWGEPTDTVQEEPQKGGRFEVWSYDDSRSVRFDSKGRVSAITL*
Ga0075428_1002686152	3300006844	Populus Rhizosphere	MLKSVCVLFSVLFVAPPAAAEIFKCVGKYGEALYQNFPCQFESMGSVPVDAPGSKKPSALPTETRLGMGSKKPPALPAEPRVGMTNDEVRAIWGEPTEIIQEEPGEGSRFEVWSYGDSRSVRFDRKRRVSSIQQ*
Ga0075421_1001471023	3300006845	Populus Rhizosphere	MLKSVCVLFSVLFVAPPAAAEIFKCVGKYGEALYQNFPCQFESMGSVPVDAPGSKKPSALPTETRLGMGSKKPPALPAEPRVGMTNDEVRAIWGEPTEIIQEEPGEGSRFEVWSYGDSRSVRFDRKRRVSFVQK*
Ga0075433_100104343	3300006852	Populus Rhizosphere	MLKSVCVFFSVLFVAPLASAEVFKCVGKYGEALYQNFPCQFKSMGWTPMDAQSPKKSPALPAQPDIGMTTEEVKAIWGEPTDTVQEEPQKGGRFEVWSYDDSRSVRFDSKGRVSAITL*
Ga0075433_119215131	3300006852	Populus Rhizosphere	MLKFVPVLLSVLFVSPLAFAEVFQCVGKYGEALYQNFPCEFESRREMPTDVPDTKKSLTDVADIKKSPTNVAGQKKPPAAPAEPRIGMTTEEVRAVWGEPTDSLWEEPGDGDRSEIWSYGGSRSVRFDSKRRVAAIQQ*
Ga0075420_1000272435	3300006853	Populus Rhizosphere	MLKSVCVLFSVLFVARLASAEIFKCVGKNGEDLYQNFPCQFESGGGMPTDVADTKKSPTDVLGPKKSPAAPAEPRIGMTSDEVRTIWGEPTEIIQEEPGDGGRFEVWSYG
Ga0075425_1017182911	3300006854	Populus Rhizosphere	MLKSVCVLFFLLFVAPLTSAEVFKCVGKKGEDLYQNFPCQFESGGGMPTDVADTKKSPTDVADTKKSRADVAGPKKSPAAPAEPRVGMTSDEVRTIWGEPTEIIQEEPGDGGRFEVWSYGASRSVR
Ga0066710_1007171981	3300009012	Grasslands Soil	MLKSVCVLFSILFVAPLASAEIFKCVGKSGEDLYQNFPCQFESIGWVPMDAQDPKKSPAVPTEPRLGAQGPKKSPAVPAEPRVGMTTEEVKAIWGEPTDTVQEEPGDGPRYEVWSYGDSRSVRFDRRGRVTAIQL
Ga0111539_100939152	3300009094	Populus Rhizosphere	MLKSVCVLFSVLFVAPPAYAEVFKCVGKYGEALYQNFPCQFESMGSVPVDAPGSKKPSALPTETRLGMGSKKPPALPAEPRVGMTNDEVRAIWGEPTEIIQEEPGEGSRFEVWSYGDSRSVRFDRKRRVSFVQK*
Ga0075418_106904762	3300009100	Populus Rhizosphere	MLKSVCVLSVLFVAPPAAAEIFKCVGKYGEALYQNFPCQFESMGSVPVDAPGSKKPSALPTETRLGMGSKKPPALPAEPRVGMTNDEVRAIWGEPTEIIQEEPGEGSRFEVWSYGDSRSVRFDRKRRVSFVQK*
Ga0105092_102968781	3300009157	Freshwater Sediment	IVGSADLPDLLHRNLKTKQGKLAMLKSVCVLFSVLFVTPLAFAEVFKCVGKNGEDLYQNFPCQFESGGGMPMGAPNQKDAPGPKKSPADVMGSKKSSAAPAEPRIGMTADEVRAIWGEPTDTVQEEPGDGPRFEVWSYGPSRSVRFDRKRRVAAIQQ*
Ga0075423_100356954	3300009162	Populus Rhizosphere	MLKSACVLFSSVLFLAPLASAEVFKSVGKSGEDLYQNFPCEFESRGGMPTDVADTKKSPTDAQGAKKSPAAPTQKRLGDAQGLKKSPAAPAQPRVGMTTEEVRAIWGEPTDTHWEEPGDGDLSELWSYGDSRSVRFGPRGRVAAIQQ*
Ga0075423_106648742	3300009162	Populus Rhizosphere	MLKSVCVLFFLLFVAPLTSAEVFKCVGKKGEDLYQNFPCQFESMGGTPTDVLDPKKPPTDVAAPKKSPAAPTQQRLGAAQGQKKPPALPAEPQIGMTTEEVRAIWGEPTDTVQEEPQIGGRLEVWLYGDSRSVSFNPRGRVAAIQK*
Ga0126374_102481151	3300009792	Tropical Forest Soil	MLKFAYILFFSVFLVAPPASAEVFKCIGKKGEDLYQNFPCEFESMGGMPTDAAGSKTSTADVRDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTRWEEPGDGDLSEIWSYGASQSVRFDRKRRVAAIQQ*
Ga0126380_102540511	3300010043	Tropical Forest Soil	LASAEVFKCVGKNGEDLYQNFPCQFESRGVMPTDVASPKKSTIDVPGPKKSPAAPVEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDLSEVWSYGASRSVRFDRKRRVAAIQQ*
Ga0126380_107154122	3300010043	Tropical Forest Soil	MLKTVYVVFPVLFVAPLASAEIFKCVGKSGEALFQNFPCQFESGEGIPMDIPSPKKSLTDVAAPKKSPAVPAEPRVGMTTDEVRAIWGEPTNTVQEEPGDGGRFQVWSYNGSRSVRFDRKRRVAAIQK*
Ga0126380_107847301	3300010043	Tropical Forest Soil	MLKFAYILFFSVFLVAPPASAEVFKCIGKKGEDLYQNFPCEFESMGGMPTDAAGSKTSTADVRDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTRWEEPGDGDLSEIWSYGASRSVRFDRKRRVAAIQQ*
Ga0126384_109017392	3300010046	Tropical Forest Soil	LASAEVFKCIGKKGEDLYQNFPCEFESMGGMPTDAAGSKTSTADVRDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPIDTRWEEPGDGDLSEIWSYGASQSVRFDRKRRVAAIQQ*
Ga0126384_112783311	3300010046	Tropical Forest Soil	MLKFAYILFFSVFLVAPPASAEVFKCIGKKGEDLYQNFPCEFESMGGKPTDAQGSGKTPVDASGPKKSVADVAGPRKPPAAPAEPRIGMTTEEVRAIWGEPTDTRWEEPGDGDLSEIWSYGA
Ga0126382_119975811	3300010047	Tropical Forest Soil	MLTFAYILFFSVFLVAPPASAEVFKCIGKKGEDLYQNFPCEFESMGGMPTDAAGSKTSTADVRDPKKSPTDIAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTRWEEPGDGDLSEI
Ga0126370_100847141	3300010358	Tropical Forest Soil	MLKFAYILFFSVFLVAPPASAEVFKCIGKKGEDLYQNFPCEFESMGGMPTDAAGSKTSTADVRDPKKSPTDVASPKKSTIDVPGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDLSEIWSYGASQSVRFDRKRRVAAIQQ*
Ga0126376_128145441	3300010359	Tropical Forest Soil	PPASAEVFKCIGKKGEDLYQNFPCEFESMGGMPTDAAGSKTSTADVRDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTRWEEPGDGDLSEIWSYGASQSVRFDRKRRVAAIQQ*
Ga0126378_128820231	3300010361	Tropical Forest Soil	MLKFAYILFFSVFLVAPPASAEVFKCIGKKGEDLYQNFPCEFESMGGMPTDAAGSKTSTADVRDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTRWEEPGDGDLSE
Ga0126377_106860651	3300010362	Tropical Forest Soil	MLKFAYILFFSVFLVAPPASAEVFKCIGKKGEDLYQNFPCEFESMGGKPTDAQGSGKTPVDASGPKKSVADVAGPRKPPAAPAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDLSEVWSYGASRSVRFDRKRRVAAIQQ
Ga0126377_114562341	3300010362	Tropical Forest Soil	LASAEVFKCLGKNGEALYQNIPCQFESVSGMTMDLQDPKKPAEKSPKDAPAPKKSPAAPAEPRVGMTSDEVRTIWGEPTSIVQEEPGDGGRFEVWSYDASRSVRFDRKGRVSNIQQ*
Ga0126379_101654761	3300010366	Tropical Forest Soil	LASAEVFKCVGKNGEDLYQNFPCQFESRGVMPTDVASPKKSTIDVPGPKKSPAAPVEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDLSEVWSYGASRSVRFDRKRRVAAIQQ
Ga0126379_111051841	3300010366	Tropical Forest Soil	MLKFAYILFFSVFLVAPPASAEVFKCIGKKGEDLYQNFPCEFESMGGMPTDAAGSKTSTADVRDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPIDTRWEEPGDGDLSEIWSYGASQSVRFDRKRRVAAIQQ*
Ga0126381_1026270901	3300010376	Tropical Forest Soil	MLKTICVLFSVLFFPPLASAEVFKCVGKYGEALYQNFPCQFESTRDIPTDVPDTKKSLTDVADIKKSPTNVAGQKKPPAAPAEPRIGMTTEEVRAIWGEPTDSRWEEPGDGDRSEVWSYGDSRSVRFDSKRRVAAIQQ*
Ga0126383_112605652	3300010398	Tropical Forest Soil	CVFFSVLFVAPLASAETFKCVGKYGEALYQNFPCHLESIGSTPGGGTSAGGTSVDGTSNGRSSLNAQQGKKSPAAPAEPRVGMTSEEVKAIWGEPNETIQEEPGQGSRFEVWSYGSVSVRFDRKGRVTAIQ*
Ga0137364_109876712	3300012198	Vadose Zone Soil	VLFFPPLASAEVFKCVGKYGEALYQNFPCQFESRRDMPTDVPDTNKSLTDVVDIQKSPTNVAGQKKRPAAAAEPRIGMTTEEVRAIWGEPTDSLWEEPGDGDRSELWSYGGSRSVRFDSKRRVAAIQQ*
Ga0137382_100486451	3300012200	Vadose Zone Soil	MLKVICVLFSVLFFPPLASAEVFKCVGKYGEALYQNFPCQFESRRDMPTDVPDTKKSLTDVVDIQKSPTNVAGQKKRPAAAAEPRIGMTTEEVRAIWGEPTDTFWEEPGEGELSELWSYGGSRSVRFDSKRRVAAIQQ*
Ga0137362_100334123	3300012205	Vadose Zone Soil	MLKSACVLFSSVLFLAPLASAEVFKCVGKSGEDLYQNFPCQFESRGGMPTDVADTKKSPTDAHGAKKSPAAPTQKRLGDAQGLKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDLSELWSYGPSRSVRFDRKRRVAAIQQ*
Ga0150985_1213309191	3300012212	Avena Fatua Rhizosphere	LYAEVFKCVGKNGEALYQNFPCQFESMSWVAKDVPELKKSSTNEEKPTEAAAAPAKPRVGMTADEVKAIWGEPTEIIQEEPGEGSRFEVWSYGSGTVRFDRKRRVAAIQ*
Ga0137370_108155832	3300012285	Vadose Zone Soil	LYQNFPCQFESRRDMLTDVPDTKKSLTDVVDIQKSPTNVAGQKKRPAAAAEPRIGMTTEEVRAIWGEPTDSLWEEPGDGDRSELWSYGGSRSVRFDSKRRVAAIQQ*
Ga0137372_101549882	3300012350	Vadose Zone Soil	VLLILPDLLYGNLKTKRGKLAMLKSVCVLFSVLFVAPLAFAEIFKCVGKNGEDLYQNFPCQFESMGGMPIDAQGPKKSPALPVEQRLGMGPKKSPALPAEPRLGMTTEEVKAIWGEPADTVQEEPREGRFEVWSYGASRTVRFDRRGRVIAITL*
Ga0137369_104698662	3300012355	Vadose Zone Soil	VLLILPGLLYGNVNAKRGNLAMLKSVCVLFSVLFVAPLAFAEVFKCVGKTGEDLYQNFPCQFESMGGMPIDAQGPKKSPALPVEPRLGMGSKKSPALPAEPRLGMTTEEVKAVWGEPADTVQEEPGKGGRFEVWSYGVSRSVRFDHKGRVSAIQQ*
Ga0137373_102408992	3300012532	Vadose Zone Soil	VSNFFVLLILPGLLYGNLDTKRGNLAMLKSVYVLFFVLFVAPLAFAEVFKCVGKTGEDLYQNFPCQFESMGGMPIDAQGPKKSPALPVEQRLGMGPKKSPALPAEPRLGMTTEEVKAIWGEPADTVQEEPREGRFEVWSYGASRTVRFDRRGRVIAITL*
Ga0137397_105218232	3300012685	Vadose Zone Soil	PLASAEIFKCVGQYGEALYQNFPCQFVSMGGMPMDAPGPKESPADVSAPKKSPAAPAAPRVGMTNDEVRAIWGEPTEIIQEEPGEGSRFEVWSYDASRSVRFDRKRPVSSIQQ*
Ga0137394_100816713	3300012922	Vadose Zone Soil	LYQNFPCQFESRGGMPTDVADTKKSPTDAQEAKKSPAAPTQKRLGDAQGLKKSAAAPAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDLSEIWSYGASRSVRFDRKRRVAAIQQ*
Ga0137407_106255982	3300012930	Vadose Zone Soil	SAEVFKCVGKSGEDLYQNFPCQFESRGGMPTDVSDTKKSPTDAQEAKKSPAAPTQKRLGDAQGLKKSAAAPAEPRIGMTTEEVRAIWGDPTDTHWEEPGDGDLSELWSYGASRSVRFDRKRRVAAIQQ*
Ga0153915_103618361	3300012931	Freshwater Wetlands	LICADFTGFALRKSKDDATTRGKLAMLKSLCVLFSVLFVAPLASAEVFKCVGKYGEDLYQNFPCQFESMGGTPMDAQGQKKSPDVPTEPRLGMTTEEVRAIWGEPTDNVQEEPGKGSRFEVWSYGDSRSVRFDRRGRVTDIQM*
Ga0137410_100551204	3300012944	Vadose Zone Soil	MLKSVCVLFSVLFVAPPAYAEVFKCVGKYGEALYQNFPCQFESMGSVPTDAQGAKKSPAAPTQQRLGAQGQKKPPALPAEPQIGMTTEEVRAIWGEPTDTVQEEPQIGGRLEVWSYGDSRSVSFNPRGRVAAIQK*
Ga0164303_112230591	3300012957	Soil	MLKSVCVLFFVLFIAPLATAEIFKCVGKKGEALYQHFPCQFESRGGMPTDVADTKKSPTDAQGAKKSPAAPAEPRIGMTTEEVRAIWGEPTDTRWEEPGDGDLSEVWSYGASRSVRFDRKRRVAAIQQ*
Ga0134077_101859001	3300012972	Grasslands Soil	VLLVLPNLLYGNLKIKREKRAMLKSVCVLFSILFVAPLASAEIFKCVGKSGEDLYQNFPCQFESIGWVPMDAQDPKKSPAVPTEPRLGAQGPKKSPAVPAEPRVGMTTEEVKAIWGEPTDTVQEEPGDGPRYEVWSYGDSRSVRFDRRGRVTAIQL*
Ga0164304_118098081	3300012986	Soil	FKCVGKNGEALYQNFPCQFESMGGMPTDVPDPKKSPTDVASPKKSTIDVPGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDLSELWSYGASRSVRFDRKRRVAAIQQ*
Ga0163162_101022272	3300013306	Switchgrass Rhizosphere	MLKSVCVLFSVFFVAPPAAAEIFKCVGKYGEALYQNFPCQFESMGSVPVDAPGSKKPSALPTETRLGMGSKKPPALPAEPRVGMMSDEVIAIWGEPTEIIQEEPGEGSRFEVWSYGASRSVRFDRKRRVSSIQQ*
Ga0157375_128969121	3300013308	Miscanthus Rhizosphere	MLKSVCVLFSVLLVAPLASAEIFQCVGKYGEALYQNFPCQFVSMSGMPMDAPGPKELPADVPGAKKSPTDVPGAKKSPAASAAPRAGMTGDEVRAVWGEPTEIIQEEPGEGSRFEVWSYGDSRSVRFDRKRRVSSVQK*
Ga0134075_104315261	3300014154	Grasslands Soil	MLKSVCVLFSVLFVAPLASAEIFKCVGKSGEDLYQNFPCQFESIGWVPMDAQDPKKSPAVPTEPRLGAQGPKKSPAVPAEPRVGMTTEEVKAIWGEPTDTVQEEPGDGPRYEVWSYGDSRSVRFDRRGRVTAIQL*
Ga0134089_105352401	3300015358	Grasslands Soil	LYGNLNTKRGKPAMLRSVCVLFSVLFVAPLASAEIFKCVGKSGEDLYQNFPCQFESIGWVPTDAQDPKKSPAVPTEPRLGAQGPKKSPAVPAEPRVGMTTEEVKAIWGEPTDTVQEEPGDGPRYEVWSYGDSRSVRFDRRGRVTAIQL*
Ga0132256_1002350832	3300015372	Arabidopsis Rhizosphere	MLKSVCVLFAVLLVAPLASAEVFKCVGKYGEALYQNFPCQFASMGGTAMDAPGPKELPAEVSGPKESPANVSGAKKSPAASAEPRAGMTGDEVRAIWGEPTEIIQEEPGDGSRFEVWSYGASRSVRFDRKRRVSSIQQ*
Ga0132257_1003142742	3300015373	Arabidopsis Rhizosphere	MLKSVCVLFAVLLVAPLASAEVFKCVGKYGEALYQNFPCQFVSMGGTAMDAPGPKELPADVPGPKKSPTDVSGAKKSPAASAEPRAGMTGDEVKAIWGEPTEIIQEEPGDGSRFEVWSYGASRSVRFDRKRRVSSIQQ*
Ga0132255_1009404411	3300015374	Arabidopsis Rhizosphere	MLKSVCVLFAVLLVAPLASAEVFKCVGKYGEALYQNFPCQFVSMGGTAMDAPGPKELPADVPGPKKSPTDVSGAKKSPAASAEPRAGMTGDEVRAIWGEPTEIIQEEPGDGSRFEVWSYGASRSVRFDRKRRVSSIQQ*
Ga0182033_101666251	3300016319	Soil	MLKVICGLFSVLFFPPLVSAEVFKCVGKYGEALYQNFPCQFESRREMPTDVPDTKKSITDVADIKKSPTNVAGQKKPPAAVAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDRSEIWSYGASRSVRFDSKRRVAAIQQ
Ga0182040_108539341	3300016387	Soil	MLKAICVLFSVLFFPPLASAEVFKCVGKYGEALYQNFPCQFESRREMPTDVPDTKKSITDVADIKKSPTNVAGQKKPPAAVAEPRIGMTTEEVRAIWGEPTDSLWEEPGDGDRSEVWSYGGSRSVRFDSKRRVAAIQQ
Ga0182038_119059801	3300016445	Soil	SAEVFKCVGKYGEALYQNFPCQFESRREMPTDVPDTKKSITDVADIKKSPTNVAGQKKPPAAVAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDRSEIWSYGASRSVRFDGKRRVAAIQQ
Ga0184608_102929571	3300018028	Groundwater Sediment	VLKSVFVLFSVLFLAPLASAEVFKCVGKSGEDLYQNFPCQFESMGGMPTDVPDTKKSPTDVADTKKSRADVAGPKKSPAAPAEPRVGMTSDEVRTIWGEPTEIIQEEPGDGGRFEVWSYGASRSVRFDRKRRVAAIQQ
Ga0184638_10082042	3300018052	Groundwater Sediment	MLKSVCVLFSVLFVAPLASAEIFKCVGKYGEDLYQNFPCQFESIGWIPIDGQGPKKLPALPAEPRLAVGAKKSPALPAEPRPGMTTEEVRAIWGEPTDTVQEEPGKGGRFEVWSYGVSRSVRFDHRGRVFTIQQ
Ga0184638_11612451	3300018052	Groundwater Sediment	TKRGKLAVLKSVFVLFSVLFLAPLASAEVFKCVGKSGEDLYQNFPCQFESRGGMPTDVADTKKSPTDAQGAKKSPAAPTQKRLGDAQGLKKSPAAPAEPRIGMTTEEVRAIWGEPTDTRWEEPGDGDLSELWSYGDSRSVRFGPRGRVAAIQQ
Ga0184626_100155613	3300018053	Groundwater Sediment	MLKSVCVLFSVLFVAPLASAEIFKCVGKYGEDLYQNFPCQFESIGWIPIDGQGPKKLPALPAEPRLAVGAKKSPALPAEPRPGMTTEEVRAIWGEPTDTHWEEPGDGDLSELWSYGDSRSVRFGPRGRVAAIQQ
Ga0184619_101643921	3300018061	Groundwater Sediment	MLKSVCVLFFLLFVAPLTSAEVFKCVGKKGEDLYQNFPCQFESGGGMPTDVPDTKKSPTDVADTKKSRADVAGPKKSPAAPAEPRVGMTSDEVRAIWGEPTEIIQEEPGDGGRFEVWSYGASRSVRFDRKR
Ga0184635_100693981	3300018072	Groundwater Sediment	MLKVICVLFSVLFFPPLASAEVFKCVGKYGEALYQNFPCQFESRRDMPTDVPDTKKSLTDVVDIQKSPTTVAGQKKRPAAAAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDLSEIWSYGASRSVRFDRKRRVAAIQQ
Ga0184612_100054255	3300018078	Groundwater Sediment	MLKSVCVLFSVLFVAPLAFAEVFKCVGKKGEALYQNFPCQFDSGGGMPTDVADTKKSPTDVAGPKKSPTDVAGPKKSPAAPAQPRVGMTTEEVRAIWGEPTDTHWEEPGDGDLSELWSYGDSRSVRFGPRGRVAAIQQ
Ga0184625_101080691	3300018081	Groundwater Sediment	MLKSACVLFSSVLFLAPLASAEVFKCVGKSGEDLYQNFPCQFESRGGMPTDVADTKKSPTDAQGAKKSPAAPTQKRRGDAQGLKKSPAAPAEPRIGMTTEEVRALWGEPTDTHWEEPGDGDLSELWSYGDSRSVRFGPRGRVAAIQQ
Ga0184625_104104211	3300018081	Groundwater Sediment	MLKSVCVLFSVLFVAPPAAAEIFKCVGKYGEALYQNFPCQFESMGSVPVDAPGSKKPSALPTETRLGMGSKKPPALPAEPRVGMTNDEVRAIWGEPTEIIQEEPGDGGRFEVWSYGASRSVRFDRKRRVAAIQQ
Ga0180117_10872551	3300019248	Groundwater Sediment	GKNGEDLYQNFPCQFESISGTPTDAPGPKKSPTDVAAPKKSTAAPAEPRIGMTTDEVRAIWGEPTDTVQEEPGDGGRFEVWSYGPSRSVRFDRKRRVAAIQQ
Ga0193743_10384902	3300019889	Soil	MLKSVCVLFSVLLVAPLASAEVFKCVGKYGEALYQNFPCQFVSMGGTPMDAPGPKELPADVPGAKKSPTDVSGAKKSPTASAAPRAGMTGDEVRALWGEPTEIIQEEPGEGSRFEVWSYGDSRSVRFDRKRRVSSVQK
Ga0193717_10026214	3300020060	Soil	MLKSVCVLFSVLLVAPLASAEVFKCVGKYGEALYQNFPCQFVSMGGTPMDAPGPKELPADVPGAKKSPTDVSGAKKSPTASAAPRAGMTGDEVRALWGEPTEIIQEEPGEGSRFEVWSYDASRSVRFDRKRRVSSVQK
Ga0126371_106436921	3300021560	Tropical Forest Soil	MFKSFCALLFLLFGVSLASAEVFKCIGKKGEDLYQNFPCEFESMGGMPTDAAGSKTSTADVRDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDSRWEEPGDGDRSEVWSYGDSRSVRFDSKRRVAAIQQ
Ga0222625_11108991	3300022195	Groundwater Sediment	PLSSAEIFKCVGKNGEALYQNFPCQFEWMDGIPTDVPAPKKSPTEVFGPKKLPTVPAEPRVGMTTDEVRGIWGEPTDTLQEEPGDGSRFEVWSYGASRSVRFDRKRCVAAIQQ
Ga0224452_10404252	3300022534	Groundwater Sediment	VLKSVFVLFSVLFLAPLASAEVFKCVGKSGEDLYQNFPCQFESRGGMPTDVADTKKSPTDAQGAKKSPAAPTQKRLGDAQGLKKSPAAPAEPRIGMTTEEVRALWGEPTDTHWEEPGDGDLSELWSYGDSRSVRFGPRGRVAAIQQ
Ga0222622_100647662	3300022756	Groundwater Sediment	MLKSVCVLFSVLFVAPLAYAEVFKCVGKYGEDLYQNFPCQFMSMGGMPMDAPGPKESPAEVPGPKKSPANVSGAKKSPAASAEPRAGMTGDEVRAIWGEPTEIIQEEPGEGSRFEVWSYDASRSVRFDRKRRVASVQK
Ga0222622_101399412	3300022756	Groundwater Sediment	MLKSACVLFSSVLFLAPLASAEVFKCVGKSGEDLYQNFPCQFESRGGMPTDVADTKKSPTDAQGAKKSPAAPTQKRLGDAQGLKKSPAAPAEPRIGMTTEEVRALWGEPTDTHWEEPGDGDLSELWSYGDSRSVRFGPRGRVAAIQQ
Ga0207665_109401242	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLKSVCVLFFVLFIAPLATAEIFKCVGKKGEALYQNFPCQFESMDGMPTDVPDPKKSPTDVASPKKSTIDVPGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDRSELWS
Ga0209382_100197087	3300027909	Populus Rhizosphere	MLKSVCVLFSVLFVAPPAAAEIFKCVGKYGEALYQNFPCQFESMGSVPVDAPGSKKPSALPTETRLGMGSKKPPALPAEPRVGMTNDEVRAIWGEPTEIIQEEPGEGSRFEVWSYGDSRSVRFDRKRRVSFVQK
Ga0268265_110973482	3300028380	Switchgrass Rhizosphere	MLKSLCALFSVLFVAPPAYAEVFKCVGKYGEALYQNFPCQFVSMGGMPTDAPGSKELPADVPSPKKSSTAVSGAKKPPAAPRVGMTNDEVRDIWGEPTEIIEEEPGEGSRFELCLSLQQAPLGSDLLTLEGDLKVHERAN
Ga0308198_10764891	3300030904	Soil	MLKSACVLFSSVLFLAPLASAEVFKCVGKSGEDLYQNFPCQFESRGGMPTDVADTKKSSADALGPKKSPAAPAEPRVGMTSDEVRAIWGEPTEIIQEEPGDGGRFEVWSYGASRSVRFDRKRRVAAIQQ
Ga0075394_120060301	3300030969	Soil	MLKSVCVFFSVLFVAPLVSAEVFKCVGKKGEDLYQNFPCQFESRGGMPTDVADTKKSLTDVTDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDRSELWSYSASRSVRFDPKRRVAAIQQ
Ga0308187_100044082	3300031114	Soil	VLKSVFVLFSVLFLAPLASAEVFKCVGKSGEDLYQNFPCQFESRGGMPTDVADTKKSPTDAQGAKKSPAAPTQKRLGDAQGLKKSPAAPAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDLSEIWSYGASRSVRFDRKRRVAAIQQ
Ga0307500_102155311	3300031198	Soil	LFAVLLVAPLASAEVFKCVGKYGEALYQNFPCQFVSMGGTAMDAPGPKELPADVPGSKKSPTDVSGAKKSPAASAEPRAGMTGDEVRAIWGEPTEIIQEEPGDGSRFEVWSYGASRSVRFDRKRRVSSIQQ
Ga0307497_101758731	3300031226	Soil	MLKSVCVLFAVLLVAPLASAEVFKCVGKYGEALYQNFPCQFVSMGGTAMDAPGPKELPADVPGSKKSPTDVSGAKKSPAASAEPRAGMTGDEVRAIWGEPTEIIQEEPGDGSRFEVWSYGASRSVRFDRKRRVSSIQQ
Ga0170824_1237547971	3300031231	Forest Soil	MLKSVCVFFSVLFVAPLVSAEVFKCVGKKGEDLYQNFPCQFESRGGMPTDVADTKKSLTDVTDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDLSELWSYGASRSVRFDSKRRVAAIQQ
Ga0170818_1039322582	3300031474	Forest Soil	MLKSVCVFFSVLFVAPLVSAEVFKCVGKKGEDLYQNFPCQFESRGGMPTDVADTKKSLTDVTDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDLSELWSYGASRSVRFDPKRRVAAIQQ
Ga0318528_106717441	3300031561	Soil	AICVLFSVLFFPPLASAEVFKCVGKYGEALYQNFPCQFESRREMPTDVPDTKKSITDVADIKKSPTNVAGQKKPPAAVAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDRSEIWSYGASRSVRFDGKRRVAAIQQ
Ga0307469_100618212	3300031720	Hardwood Forest Soil	MLKSVCVLFSVLFVAPLATADVFKCVGKSGEDLYQNFPCQFESIGATPGEGTSVGGTPKGGTPTGETSIHAQGQKKSPTAPAEPRVGMTTEEVRAIWGEPTNTVQEEPGDGPRSEVWSYGDSRSVRFDRRGRVTAIQ
Ga0307469_112246901	3300031720	Hardwood Forest Soil	MLKSVCVLFFLLFVAPLTSAEVFKCVGKKGEDLYQNFPCQFESGGGMPTDVADTKKSPTDVADTKKSRADVAGPKKSPAAPAEPRVGMTSDEVRTIWGEPTEIIQEEPGDGGRFEVWSYGASRSVRFDRKRRVAAIQQ
Ga0306918_110770721	3300031744	Soil	LAMLKTVWVLFSVFFLAPWASAEVFKCVGKNGEALYQNFPCQFESISGTPMEAPGATKSPADAPVPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDRSEIWSYGASRSVRFDSKRRVAAIQQ
Ga0318521_106539232	3300031770	Soil	MLKAICVLFSVLFFPPLASAEVFKCVGKYGEALYQNFPCQFESRREMPTDVPDTKKSITDVADIKKSPTNVAGQKKPPAAVAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDRSEIWSYGASRSVRFDSKRRVAAIQQ
Ga0306919_105708542	3300031879	Soil	FFPPLASAEVFKCVGKYGEALYQNFPCQFESRREMPTDVPDTKKSITDVADIKKSPTNVAGQKKPPAAVAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDRSEIWSYGASRSVRFDSKRRVAAIQQ
Ga0306923_107335621	3300031910	Soil	VFFSVLFVAPLASAEVFKCVGKNGEALYQNFPCQFESISGTPMEAPGATKSPADAPVAKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDRSEIWSYGASRSVRFDGKRRVAAIQQ
Ga0310913_110799201	3300031945	Soil	VFKCVGKYGEALYQNFPCQFESRREMPTDVPDTKKSITDVADIKKSPTNVAGQKKPPAAVAEPRIGMTTEEVRAIWGEPTDTLWEEPGDGDRSEIWSYGASRSVRFDSKRRVAAIQQ
Ga0310909_102097221	3300031947	Soil	MLKAICVLFSVLFFPPLASAEVFKCVGKYGEALYQNFPCQFESRREMPTDVPDTKKSITDVADIKKSPTNVAGQKKPPAAVAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDRSEVWSYGASRSVRFDGKRRVAAIQQ
Ga0306924_105180532	3300032076	Soil	AYAPLAVAEIFKCVGKNGEALYQNFPCQFEWMGGMPMDVPAPKKSSTEVLGPKKLPTVPAEPRVGMTSDEVRTIWGERTDTVQEELGNGSRLEVWSYGASRSVGFDRKRRVAAIQQ
Ga0307470_100400552	3300032174	Hardwood Forest Soil	VLKSVFVLFSVLVIAPLASAEVFKCVGKKGESLYQNFPCQFESMGGMPMDAAGSKTSTADVRDPKKSLTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPIDTHWEEPGDGDLSEVWSYGASRSVRFDRKRRVAAIQQ
Ga0307471_1000223634	3300032180	Hardwood Forest Soil	MLKFVCVLFSVLFVAPLATADVFKCVGKSGEDLYQNFPCQFESIGATPGEGTSVGGTPKGGTPTGETSIHAQGQKKSPTAPAEPRVGMTTEEVRAIWGEPTNTVQEEPGDGPRSEVWSYGDSRSVRFDRRGRVTAIQ
Ga0307471_1000515113	3300032180	Hardwood Forest Soil	MLKSVCVLFSVLFVAPLATADVFKCVGKSGEDLYQNFPCQFESIGATPGDGTSVGGTPKGGTPKGETSINAQGQKKPPALPAEPQIGMTTDEVRAIWGEPTDTVQEEPQIGGRLEVWSYGDSRSVSFNPRGRVVAIQK
Ga0307471_1007377081	3300032180	Hardwood Forest Soil	VGKKGEALYQNFPCQFESMGGMPTDVPDPKKSSTDAAGSKTSPADVRDPKKSPTDVAGPKKSPAAPAEPRIGMTTEEVRAIWGEPTDTHWEEPGDGDLSELWSYGASRSVRFDRKRRVAAIQQ
Ga0307471_1039902041	3300032180	Hardwood Forest Soil	MLKSVCVLFFVLFVAPLASAETFKCVGKYGEALYQNFPCQFESIGSTPMDAQDPKKTPAVPTEPRLGAQGPKKSPAVPAEPRVGMTTEEVKAIWGEPTDTVQEEPGDGPRYEVWSYGASRSVRFDRRGR
Ga0307472_1003592642	3300032205	Hardwood Forest Soil	MLKSVCVLFSVLFVAPLATADVFKCVGKSGEDLYQNFPCQFESIGATPGEGTSVGGTPKGGTPTGETSIHAQGQKKSPTAPAEPRVGMTTEEVRAIWGEPTNTVQEEPGDGPRSEVWSYGDSRSVRFDRRGRVTAVTL
Ga0306920_1006623362	3300032261	Soil	MLKVICGLFSVLFFPPLVSAEVFKCVGKYGEALYQNFPCQFESRRDMPTDVPDTKKSLTDVVDIQKSPTNVASQKKPPAAAAEPRIGMTTEEVRAIWGEPTDSLWEEPGDGDRSEVWSYGGSRSVRFDSKRRVAAIQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088467

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences