| Basic Information | |
|---|---|
| Family ID | F088378 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 109 |
| Average Sequence Length | 58 residues |
| Representative Sequence | MADKWIQGAVKHPGALTAAAKRHGVSKLQEAEKESHSSNPHIRARGALGKRFIKKQI |
| Number of Associated Samples | 96 |
| Number of Associated Scaffolds | 109 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 78.90 % |
| % of genes near scaffold ends (potentially truncated) | 17.43 % |
| % of genes from short scaffolds (< 2000 bps) | 58.72 % |
| Associated GOLD sequencing projects | 88 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.64 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (79.817 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (8.257 % of family members) |
| Environment Ontology (ENVO) | Unclassified (30.275 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (34.862 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 45.88% β-sheet: 0.00% Coil/Unstructured: 54.12% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.64 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 109 Family Scaffolds |
|---|---|---|
| PF11450 | DUF3008 | 1.83 |
| PF03237 | Terminase_6N | 1.83 |
| PF01656 | CbiA | 0.92 |
| PF14319 | Zn_Tnp_IS91 | 0.92 |
| PF01725 | Ham1p_like | 0.92 |
| PF00959 | Phage_lysozyme | 0.92 |
| PF01391 | Collagen | 0.92 |
| PF13560 | HTH_31 | 0.92 |
| PF04404 | ERF | 0.92 |
| PF00166 | Cpn10 | 0.92 |
| PF13704 | Glyco_tranf_2_4 | 0.92 |
| PF00300 | His_Phos_1 | 0.92 |
| COG ID | Name | Functional Category | % Frequency in 109 Family Scaffolds |
|---|---|---|---|
| COG0127 | Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family | Nucleotide transport and metabolism [F] | 0.92 |
| COG0234 | Co-chaperonin GroES (HSP10) | Posttranslational modification, protein turnover, chaperones [O] | 0.92 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 79.82 % |
| All Organisms | root | All Organisms | 20.18 % |
| Visualization |
|---|
| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 8.26% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 8.26% |
| Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 6.42% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 6.42% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 5.50% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 5.50% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 4.59% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.59% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 4.59% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 3.67% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.75% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.75% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.75% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater | 1.83% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 1.83% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.83% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.83% |
| Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 1.83% |
| Bog | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog | 1.83% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 1.83% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 0.92% |
| Lentic | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic | 0.92% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater | 0.92% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 0.92% |
| Freshwater | Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater | 0.92% |
| Estuary Water | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water | 0.92% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.92% |
| Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.92% |
| Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland | 0.92% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.92% |
| Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 0.92% |
| Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 0.92% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil | 0.92% |
| Soil | Environmental → Terrestrial → Soil → Clay → Unclassified → Soil | 0.92% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.92% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 0.92% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.92% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.92% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.92% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.92% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere | 0.92% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.92% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001356 | Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 | Environmental | Open in IMG/M |
| 3300002307 | Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7 | Environmental | Open in IMG/M |
| 3300002930 | Estuary water microbial communities from Pearl Estuary, Zhujiang, China | Environmental | Open in IMG/M |
| 3300003321 | Sugarcane bulk soil Sample H1 | Environmental | Open in IMG/M |
| 3300004806 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08 | Environmental | Open in IMG/M |
| 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
| 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Environmental | Open in IMG/M |
| 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Host-Associated | Open in IMG/M |
| 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
| 3300005591 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 | Environmental | Open in IMG/M |
| 3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300005921 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 | Environmental | Open in IMG/M |
| 3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
| 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009633 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 | Environmental | Open in IMG/M |
| 3300009665 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 | Environmental | Open in IMG/M |
| 3300010233 | Filterable freshwater microbial communities from Conwy River, North Wales, UK. Fraction, filtered through 0.2 um filter. After WGA. | Environmental | Open in IMG/M |
| 3300010341 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2 | Environmental | Open in IMG/M |
| 3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
| 3300010361 | Tropical forest soil microbial communities from Panama - MetaG Plot_23 | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
| 3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014162 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG | Environmental | Open in IMG/M |
| 3300014167 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG | Environmental | Open in IMG/M |
| 3300014168 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG | Environmental | Open in IMG/M |
| 3300014169 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG | Environmental | Open in IMG/M |
| 3300014490 | Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG | Environmental | Open in IMG/M |
| 3300014492 | Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG | Environmental | Open in IMG/M |
| 3300014493 | Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG | Environmental | Open in IMG/M |
| 3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300014655 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG | Environmental | Open in IMG/M |
| 3300015054 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300016750 | Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300017754 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D | Environmental | Open in IMG/M |
| 3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
| 3300017996 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40 | Environmental | Open in IMG/M |
| 3300019230 | Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019256 | Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019260 | Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300020034 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2 | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300022591 | Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Summer S2 | Environmental | Open in IMG/M |
| 3300024178 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35 | Environmental | Open in IMG/M |
| 3300024179 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36 | Environmental | Open in IMG/M |
| 3300024232 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05 | Environmental | Open in IMG/M |
| 3300024245 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18 | Environmental | Open in IMG/M |
| 3300024249 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17 | Environmental | Open in IMG/M |
| 3300024317 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01 | Environmental | Open in IMG/M |
| 3300025410 | Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes) | Environmental | Open in IMG/M |
| 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027817 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027853 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027857 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027905 | Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes) | Environmental | Open in IMG/M |
| 3300027908 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
| 3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Host-Associated | Open in IMG/M |
| 3300031232 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3 | Environmental | Open in IMG/M |
| 3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
| 3300031673 | Soil microbial communities from Risofladan, Vaasa, Finland - TR-3 | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| 3300032665 | Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007 | Environmental | Open in IMG/M |
| 3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
| 3300032782 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1 | Environmental | Open in IMG/M |
| 3300032893 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1 | Environmental | Open in IMG/M |
| 3300032895 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3 | Environmental | Open in IMG/M |
| 3300032896 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4 | Environmental | Open in IMG/M |
| 3300033402 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN | Environmental | Open in IMG/M |
| 3300033405 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY | Environmental | Open in IMG/M |
| 3300033805 | Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10 | Environmental | Open in IMG/M |
| 3300033982 | Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI12269J14319_100441003 | 3300001356 | Peatlands Soil | MANFIRKAIRHPGAETRAAKRNKRSKRQEAEVESHSSNPHIRARGLLGLRFMKGGDLHR* |
| JGI24890J29729_10167972 | 3300002307 | Lentic | KWIQKAVRHPEALTRAASQHGVSKRQEAEHESHSSNPHIRARGILGKRFIGGDLHR* |
| Water_1003116 | 3300002930 | Estuary Water | MADKPKKWIQSAVKHPGALTRAAQQHGVSKLQEAEKESHSSNPSIRARGALGKRFIQHKI |
| soilH1_101426283 | 3300003321 | Sugarcane Root And Bulk Soil | KPMEKSVRKKNWIQGAVKHPGALTAAARKHGRSKLQEAEAESHSSNPSIRARGNLGKRFIKKTI* |
| Ga0007854_1000029240 | 3300004806 | Freshwater | VQQPPHFDMANWIQGAVKHPGALTKAAKKHGRSKLQEAEAEKKSKNPKIRARGALGERFIKGKI* |
| Ga0070709_117061271 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MASKFIQHAVKHPGALTAAAKKNGRSKLQEAEVESHSKNPHTRARGILGKRFIQGDLHQD |
| Ga0070714_1019229962 | 3300005435 | Agricultural Soil | MASKFIQRAIKHPGAETAAAKRNGRSKLQESEVESHSKNPHTRARGILAKRFIQGDLHQD |
| Ga0070710_112360913 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MANWIGKAVKHPGALTAAVKRNGVSKLQEAEKESHSSNPHIRARGNLGKRFIKKTI* |
| Ga0070711_1001324951 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MANWIKGAIRHPGVLSAAAKRNGVSKLQEAEKESHSSNPSIRARGNLGKRFIKKTI* |
| Ga0070665_1005518993 | 3300005548 | Switchgrass Rhizosphere | MSKWIQKAVKHPGALTAAAKKAGRSKLQEAEVESHSSNPHIRARGLLGKRFIKKTI* |
| Ga0068855_1001093087 | 3300005563 | Corn Rhizosphere | MAKDWIKGAVKHPGALTAAAKRNGVSKLQEAEKESHSSNASIRARGNLGKRFIKKTI* |
| Ga0068857_1008141904 | 3300005577 | Corn Rhizosphere | MAKKDWISGAVKHPGALTAAAKQNGRSKLEEAEAEKKSPNPKIRARGALGARFIKGTL* |
| Ga0070761_100044824 | 3300005591 | Soil | MAKQWIQSAVKHPGALSAAAKRNGKSKLQEAEAESHSSNPSIRARGALGKRFIQKKI* |
| Ga0070761_103349442 | 3300005591 | Soil | MAEKKNWISGAVKHPGALTAAAKEHGKSKLQEAEAESHSKNPHIRARGNLGKRFIKKEI* |
| Ga0070762_100031913 | 3300005602 | Soil | MANWIGGAVKHPGALTAAAKRHGVSKLQEANKESHSSNPHIRARGALGKRFIKKTI* |
| Ga0068856_1000680603 | 3300005614 | Corn Rhizosphere | MAKDWIKGAVKHPGALTAAAKRNGVSKLQEAEKESHSLNASIRARGNLGKRFIKKTI* |
| Ga0068863_1014827991 | 3300005841 | Switchgrass Rhizosphere | MADRWLQAAVKHPGSLTRAAQQHGISKLQEAEKEKQSSNPKIRARGALGERFIKKTI* |
| Ga0070766_112786501 | 3300005921 | Soil | KEGCSAREHASKMADRWIQGAVKHPGALTAAAKRRGVSKLQEAEKESHSSDPHIRARGALGLRFIKHKI* |
| Ga0075426_115179332 | 3300006903 | Populus Rhizosphere | MPKNWIKKAVKHPGALTKAAKQRGVSKSQEAERESHSSNPHIRARGILGKRFMSGDLHR* |
| Ga0105240_101290524 | 3300009093 | Corn Rhizosphere | EPMAKDWIKGAVKHPGALTAAAKRNGVSKLQEAEKESHSSNASIRARGNLGKRFIKKTI* |
| Ga0105240_101425712 | 3300009093 | Corn Rhizosphere | MDKPKNWIQSAVKHPGALSAAAKRNGRSKLQEAEKEAKSRNPHIRARGALGERFIRKTI* |
| Ga0105248_127684012 | 3300009177 | Switchgrass Rhizosphere | MADWIKGAVKHPGSLTRAAQQHGVSKLQEAEKEKQSSNPKIRARGALGERFIKKTI* |
| Ga0105238_100454584 | 3300009551 | Corn Rhizosphere | MAKNWIGSAVKHPGALTAAAKANGRSKLEEAEVEKKSSNPKIRARGSLGERFIKKTI* |
| Ga0116129_10840793 | 3300009633 | Peatland | MSLQALAGKPKKWLKGAVRHPGALTEAASRNGVSKLQEAEKESHSKNPHVRGRGLLGMRFLKKEI* |
| Ga0116135_10335933 | 3300009665 | Peatland | MANWIKGAVKHPGALSAAAARHGVSKLQEAEKEAKSSNPHIRGRGLLGERFIKKKI* |
| Ga0136235_10165853 | 3300010233 | Freshwater | MSNWIQGAVKHPGALTEAAKRAGKSKREEAEEESHSSNPKTRGRGILGLRFMKGGDIHK* |
| Ga0074045_101813473 | 3300010341 | Bog Forest Soil | MAKQWIQKAVKHPGAETAAARRHGLSKREEAVRESHSSNPHIRARGILAKRFIGGDLHR* |
| Ga0074044_100374824 | 3300010343 | Bog Forest Soil | MANWIKKAVKHPGALTEAAKRRGVSKRQEAEKESHSSNPHIRARGILGERFIGGDLHR* |
| Ga0126378_101313692 | 3300010361 | Tropical Forest Soil | VAKNWISKAVKHPGALTAAAKAHGRSKLQEAEAESHSSNPHIRARGALGKRFIKGDLSR* |
| Ga0134125_101711913 | 3300010371 | Terrestrial Soil | MANWIGEAVKHPGALTRAAAAHGKSKHQEAEDESHSSDPSIRARGNLGLRFMKGGDLHKSHAPKRKRAGRA* |
| Ga0134125_103978982 | 3300010371 | Terrestrial Soil | MTKPKNWIQSAVKHPGALTAAARRNGRSKLQEAEKESHSSNPHIRARGALGKRFIKGTI* |
| Ga0134125_104046704 | 3300010371 | Terrestrial Soil | MAEKKNWIQGAVKHPGALKAAAKKAGRSTRQEAEAESHSSNPHIRARGALGLRFIKKSI* |
| Ga0134128_101967763 | 3300010373 | Terrestrial Soil | MAKFLQSAIKHPGALKAAAKRAGRSTLQEAEVESHSKNPHIRGRGLLGKRLIKKTI* |
| Ga0105239_102771213 | 3300010375 | Corn Rhizosphere | MAKNWIQKAVKHPGALTEAAKRHGKSKLQEAEAESHSSNPSIRARGALGKRFIQGKV* |
| Ga0134126_120683972 | 3300010396 | Terrestrial Soil | MGNWIQKAVKHPGALTAAAKKHGVSKLQEAEKEAKSKNPHIAARGRLGERFIRKTV* |
| Ga0137395_101223755 | 3300012917 | Vadose Zone Soil | MAKKWIQGAIKHPGALTAAAKKHGVSKLQEAEKESHSSNPKIRGRGNLGKRFIKGSI* |
| Ga0137413_100459901 | 3300012924 | Vadose Zone Soil | MADKKWIQGAIKHPGALTAAAKKHGVSKLQEAEKESHSSNPKIRGRGNLGKRFIKGSI* |
| Ga0137419_100372921 | 3300012925 | Vadose Zone Soil | WIQGAIKHPGALTAAAKKHGVSKLQEAEKESHSSNPKIRGRGNLGKRFIKGSI* |
| Ga0157370_120013872 | 3300013104 | Corn Rhizosphere | VANFIKKAIKHPGALTAAAKEHGVSKLQEAEKESHSKNPKIRGRGALGLRFIKKEL* |
| Ga0181538_102699504 | 3300014162 | Bog | KGAVRHPGALTAAAREHGRSKLEEAEAEKNSKNPKIRARGALGARFIKHEV* |
| Ga0181528_100097976 | 3300014167 | Bog | MAEDKWIQGAVKHPGALSAAAQRHGVSKLQQAKKEAHSSNPHIRSRGLLGERFIKKTI* |
| Ga0181528_102128362 | 3300014167 | Bog | MAKWIHKAVRHPGALTAAAKRRGVSKKQEAERESHSSNPHIRARGILGKRFMGGDLSR* |
| Ga0181534_100211543 | 3300014168 | Bog | MAEDKWIQGAVKHPGALSAAAQRHGVSKLQEAKKEAHSSNPHIRSRGLLGERFIKKTI* |
| Ga0181531_103153823 | 3300014169 | Bog | TARQGDEEAMSKWIQGAVKHPGALTRAAKEHGRSKLQEAEVESKSSNPHIRGRGMLGKRFIKGKI* |
| Ga0181531_110158182 | 3300014169 | Bog | MAEKHWIGGAIKHPGALSAAAKRNGLSKLQEAEKEKGSTSPKIRARGALGERFLRKSI* |
| Ga0182010_101157762 | 3300014490 | Fen | MAEKKNWIAGAVKHPGALAEAARRAGRSKLQEAEAESHSSDPSIRARGNLGRRFLKKTI* |
| Ga0182013_101628913 | 3300014492 | Bog | MAKWIQKAVRHPGALTTAAKRRGVSKKQEAEQESHSSNPRIRARGILGKRFMNGDLHR* |
| Ga0182016_106623753 | 3300014493 | Bog | MAEKKWLGGAVKHKGALTAAAKEHGVSKIQEAEKESHSSNPHIRARGALGVRLIKKTI* |
| Ga0182024_1002229411 | 3300014501 | Permafrost | VANWIKGAVKHPGALTAAAKRHGVSKLEEADKEKKSSNPKIRARGALGARFIQHKI* |
| Ga0181516_100984663 | 3300014655 | Bog | MAERKWIAGAVKHPGALTAAAKRRGVSELQEAEKESHSSNRHIRARGALGLRFIRKKI* |
| Ga0137420_12669571 | 3300015054 | Vadose Zone Soil | KKWIQGAIKKKWIQGAIKHPGALTAAAKKHGVSKLQEAEKESHSSNPKIRGRGNLGKRFIKGSI* |
| Ga0181505_1062023610 | 3300016750 | Peatland | MADWIKGAVKHPGALTRAAKEHGKSKLQEAEAESHSSNPHIRARGDLGKRFIRKEI |
| Ga0181344_10356474 | 3300017754 | Freshwater Lake | MAEEKKKWIQGAVRHPGALTEAARRNGKSKLQEAEAESHSSNPSIRARGNLGKRFIQHKI |
| Ga0187779_111718722 | 3300017959 | Tropical Peatland | ENMANWIKGAVKHPGALTAAAHKHGVSKVAEARKESHSSNKSTRARGLLGLRFMKGDLHK |
| Ga0187891_100082921 | 3300017996 | Peatland | MAERKWISGAVKHPGALTAAAKRRGVSKLQEAEKESHSSNPNIRARGALGLRFIRKKI |
| Ga0181501_13037626 | 3300019230 | Peatland | MADWIKGAVKHPGALTRAAKEHGKSKLQEAEAESHSSNPHIRARGNLGKRFIRKEI |
| Ga0181508_15515964 | 3300019256 | Peatland | MAEDKWIQGAVKHPGALSAAAQRHGVSKLQEAKKEAHSSNPHIRSRGLLGERFIKKTI |
| Ga0181506_10972252 | 3300019260 | Peatland | MAEKHWIGGAIKHPGALSAAAKRNGLSKLQEAEKEKGSSSPKIRARGALGERFLRKSI |
| Ga0193753_104013981 | 3300020034 | Soil | MSRWIQKAVRHPGALTAAAKRNGVSKLQEADRESKSSDPSIRARGALGRRFIKKTL |
| Ga0210406_108486601 | 3300021168 | Soil | MTEKKTHFLGGAIKHPGALTAAAKEHGVSKAQEAKKESHSSNPHVRARG |
| Ga0210394_117544812 | 3300021420 | Soil | LMAHWLSKAIKHPGALTKAAAAKGVSKHQEAAAESHSANPHIRGRGLLGLRLMGGAFKKRKGGD |
| Ga0210410_114998571 | 3300021479 | Soil | MAEEKKKHWIAGAVRHPGALSRAAAEHGKSKLQEAESESHSSDPRIRERGALGKRFIQHK |
| Ga0126371_100130962 | 3300021560 | Tropical Forest Soil | VAKNWISKAVKHPGALTAAAKAHGRSKLQEAEAESHSSNPHIRARGALGKRFIKGDLSR |
| Ga0236341_11026281 | 3300022591 | Freshwater | MADKWIQGAVKHKGALLSAAKRHGVGKVQEAEKEAHSKNPKIRARGSLGLRFMRHEI |
| Ga0247694_10161613 | 3300024178 | Soil | MADKWIQGAVKHPGALTAAAKRHGVSKLQEAEKESHSSNPHIRARGALGKRFIKKQI |
| Ga0247695_10208243 | 3300024179 | Soil | MAKKWIQGSIKHPGALTAAAKAHGVSKIQEAKREEHSSSKKIRSRGFLGERFIKHEI |
| Ga0247664_10977681 | 3300024232 | Soil | MSHWIQKAVKHPGALTAAAKKHGVSKLQEAEKEAHSKNKKIAARGRLGERFIKKTI |
| Ga0247677_10007304 | 3300024245 | Soil | MAKKWIGKSIKHPGALTAAAKAHGVSKIEEAKREEHSSSKKIRSRGFLGERFIKHEI |
| Ga0247676_10000763 | 3300024249 | Soil | MAEKKHWLGSAIKHPGALTEAAKRNGRSKMQEAKVEAKSSNPHIRGRGLLGERLIKKTI |
| Ga0247660_10105612 | 3300024317 | Soil | MAEEKKKWIQGAVKHPGALTEAARRNGKSKLQEAEAESHSSNPSIRARGNLGKRFIQHKI |
| Ga0208875_100014020 | 3300025410 | Freshwater | MANWIQGAVKHPGALTKAAKKHGRSKLQEAEAEKKSKNPKIRARGALGERFIKGKI |
| Ga0207695_103525841 | 3300025913 | Corn Rhizosphere | MDKPKNWIQSAVKHPGALSAAAKRNGRSKLQEAEKEAKSRNPHIRARGALGERFIRKTI |
| Ga0207694_100641922 | 3300025924 | Corn Rhizosphere | MAKNWIGSAVKHPGALTAAAKANGRSKLEEAEVEKKSSNPKIRARGSLGERFIKKTI |
| Ga0207694_100862511 | 3300025924 | Corn Rhizosphere | MADWISGAVKKPGALTAAAKANGRSKEEEADVESNSDNPKIRARGNLGKRFMGTASKGNIKKPH |
| Ga0207667_103037523 | 3300025949 | Corn Rhizosphere | MAKDWIKGAVKHPGALTAAAKRNGVSKLQEAEKESHSSNASIRARGNLGKRFIKKTI |
| Ga0207639_105551763 | 3300026041 | Corn Rhizosphere | MADNAKRWISGAIRHPGALSAAAKRNGRSKLQEAEKEAKSGNPHIAARGRLGERFIRKTI |
| Ga0207702_107866023 | 3300026078 | Corn Rhizosphere | RREPMAKDWIKGAVKHPGALTAAAKRNGVSKLQEAEKESHSLNASIRARGNLGKRFIKKT |
| Ga0209112_100167363 | 3300027817 | Forest Soil | MEKPKHWISGAIRHPGALSAAAKRNGRSKLQEAEKEAHSSNKHIAARGRLGERFIRKTI |
| Ga0209274_100045366 | 3300027853 | Soil | MAKQWIQSAVKHPGALSAAAKRNGKSKLQEAEAESHSSNPSIRARGALGKRFIQKKI |
| Ga0209166_106313443 | 3300027857 | Surface Soil | AAMSKWIQSAVKHPGALTAAAKRHGVSKLQEAEKESHSSNPSIRSRGNLGKRFIKKTI |
| Ga0209275_100023783 | 3300027884 | Soil | MANWIGGAVKHPGALTAAAKRHGVSKLQEANKESHSSNPHIRARGALGKRFIKKTI |
| Ga0209415_1000294117 | 3300027905 | Peatlands Soil | MANFIRKAIRHPGAETRAAKRNKRSKRQEAEVESHSSNPHIRARGLLGLRFMKGGDLHR |
| Ga0209006_101506291 | 3300027908 | Forest Soil | MADKWIQGAVKHPGALTQAARAAGRSKRDEAEKESHSSDPKIRGRGALGLRFMKKGDLHQ |
| Ga0137415_100625334 | 3300028536 | Vadose Zone Soil | MAKKWIQGAIKHPGALTAAAKKHGVSKLQEAEKESHSSNPKIRGRGNLGKRFIKGSI |
| Ga0265338_100161041 | 3300028800 | Rhizosphere | WIKGAVKHPGALTAAAKAHGKSKLEEAEAEKKSSNPKIRARGSLGERFIRKAL |
| Ga0302323_1000500004 | 3300031232 | Fen | MAEKKNWIAGAVKHPGALAEAARRAGRSKLQEAEAESHSSDPSIRARGNLGRRFLKKTI |
| Ga0302326_104972591 | 3300031525 | Palsa | MAKNWIQGAVKHPGALTKASLAHGVSKLQEANKESHSSNPSIRARGSLGKRFLAGDLKK |
| Ga0307377_107921841 | 3300031673 | Soil | MAKNWIQGAVKHPGALTAAARAHGVSKLQEAEKEAKSPNKHIAARGRLGERFIKKSV |
| Ga0310686_1087890646 | 3300031708 | Soil | VALNLKKAIKHPGALTHAARAHGVSKQQEAAKESHSSNPHIRARGILGERLMKGGDLHK |
| Ga0310686_1120956742 | 3300031708 | Soil | MAEKKNWISGAVHPGALTAAAKQHGVSKLQEAEKESHSSNPHIRARGALGKRFIQHKI |
| Ga0306926_125024672 | 3300031954 | Soil | AGKNWIQKAVKHPGALTRAAREHGISKSEEAERESHSSDPHIRGRGLLAKRFMKGDLRK |
| Ga0307479_100676984 | 3300031962 | Hardwood Forest Soil | MAKWIQRAVKHPGALTKAAKQHGVSKLQEAEKESHSSNPHIRSRGNLGKRFIKKRI |
| Ga0307471_1011236742 | 3300032180 | Hardwood Forest Soil | MANWIQGAVKHPGSLTAAAKRHGVSKLQEAQKEKQSSNPKIRARGSLGERFIKKTI |
| Ga0307472_1015662482 | 3300032205 | Hardwood Forest Soil | MAKKWLGSAIRHPGVLTAAAKQHGVSKLQEAQKESHSSNPHIRARGLLGQRLIKKQI |
| Ga0316221_11617611 | 3300032665 | Freshwater | RMAKWIQKAVKHPGALTAAAKAHGRSKLQEAEAESHSKNPHIRARGNLGKRFIKKEI |
| Ga0335085_104403714 | 3300032770 | Soil | VSNWIKRAIKHPGALTRAASQHGVSKRQEAERESHSSNPHIRARGILGKRFIKGDLHK |
| Ga0335082_100765484 | 3300032782 | Soil | MSNWIQGAVKHPGALTAAASAHGVSKAEEAEKESHSSNPHIRARGILGKRFMSGDIHKANKKFSRIGK |
| Ga0335082_101724702 | 3300032782 | Soil | MASNWISRAVKHPGAESRAASRHGLSKSQEATRESHSSNPHIRARGILAKRFIKGDLHK |
| Ga0335069_100017569 | 3300032893 | Soil | MAKWIQKAVKHPGALTAAAKRHGVSKLQEAEKESHSSNPHVRARGLLGKRFIKHKI |
| Ga0335069_103604293 | 3300032893 | Soil | MASMHELAGGKKKKWIGPAVKHPGALTAAAKRNGRTTLQEAIVESHSKDPHIRARGVLGKRFITGAIKG |
| Ga0335069_112347492 | 3300032893 | Soil | MSNWIQGAVKHPGALTAAASAHGVSKAEEAEKESHSSNPHIRARGILGKRFMSGDIHKANKKFSRIGSK |
| Ga0335069_124110652 | 3300032893 | Soil | MSKNWIKGAVKHPGALTAAARRHGVSKLQEAEKESHSSNPSIRARGNLGKRFIKKTI |
| Ga0335074_100070464 | 3300032895 | Soil | MAKWIQKAIKHPGALTRAAKQHGVSKRQEAEKESHSSNPHIRARGILGKRFMKGDLHQ |
| Ga0335075_103263634 | 3300032896 | Soil | MANFIKKAIRHPGALTRAASEHGVSKRQEAEKESHSSNPHIRARGLLGKRFMKGGDLHR |
| Ga0326728_101257902 | 3300033402 | Peat Soil | MGKKKWIGPAIKHPGALTRAASEHGVSKRQEAERESHSSNPHIRARGILGKRFIGGDLHR |
| Ga0326728_107549734 | 3300033402 | Peat Soil | MSLGKHWIQKAVKHPGAETAAAERHGLSTLQEAHREEQSPDKRIAARGRLAER |
| Ga0326727_106283204 | 3300033405 | Peat Soil | MSLGKHWIQKAVKHPGAETAAAERHGLSTLQEAHREEQSPDKRIAARGRLAERFIRGHGR |
| Ga0314864_0023809_190_366 | 3300033805 | Peatland | MANWIKGAVKHPGALTAAAHKHGVSKVAEARKESHSSNKSTRARGLLGLRFMKGDLHK |
| Ga0371487_0404079_436_588 | 3300033982 | Peat Soil | MGKKKWIGPAIKHPGALTRAASEHGVSKRQEAERESHSSNPHIRARGILGK |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |