NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F088144

Metagenome Family F088144

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F088144
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 68 residues
Representative Sequence MRTHSRRTWPLFTAVAAVAALGLFVLHGVAAGVVLLLALLGVIGAAIYALAGEKVNDGCGGIGGGTSF
Number of Associated Samples 69
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 70.00 %
% of genes near scaffold ends (potentially truncated) 22.02 %
% of genes from short scaffolds (< 2000 bps) 85.32 %
Associated GOLD sequencing projects 67
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (55.046 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(33.027 % of family members)
Environment Ontology (ENVO) Unclassified
(36.697 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.294 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 46.88%    β-sheet: 0.00%    Coil/Unstructured: 53.13%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF04542Sigma70_r2 22.94
PF08281Sigma70_r4_2 14.68
PF01980TrmO 9.17
PF00106adh_short 5.50
PF03992ABM 2.75
PF01613Flavin_Reduct 2.75
PF01925TauE 1.83
PF10002DUF2243 1.83
PF00144Beta-lactamase 1.83
PF13649Methyltransf_25 1.83
PF12847Methyltransf_18 0.92
PF13561adh_short_C2 0.92
PF13489Methyltransf_23 0.92
PF03734YkuD 0.92
PF00383dCMP_cyt_deam_1 0.92
PF00578AhpC-TSA 0.92
PF00892EamA 0.92
PF13360PQQ_2 0.92
PF00133tRNA-synt_1 0.92
PF03916NrfD 0.92
PF13417GST_N_3 0.92
PF06351Allene_ox_cyc 0.92
PF00300His_Phos_1 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 22.94
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 22.94
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 22.94
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 22.94
COG1720tRNA (Thr-GGU) A37 N6-methylaseTranslation, ribosomal structure and biogenesis [J] 9.17
COG1853FMN reductase RutF, DIM6/NTAB familyEnergy production and conversion [C] 2.75
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 1.83
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 1.83
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 1.83
COG2367Beta-lactamase class ADefense mechanisms [V] 1.83
COG0060Isoleucyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.92
COG0143Methionyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.92
COG0495Leucyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.92
COG0525Valyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.92
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.92
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.92

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms55.05 %
UnclassifiedrootN/A44.95 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003267|soilL1_10142459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1355Open in IMG/M
3300004081|Ga0063454_101599743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria562Open in IMG/M
3300004114|Ga0062593_100181660Not Available1647Open in IMG/M
3300004153|Ga0063455_100256959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria920Open in IMG/M
3300004153|Ga0063455_100653159Not Available697Open in IMG/M
3300004156|Ga0062589_101111422Not Available749Open in IMG/M
3300004643|Ga0062591_102692541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300005329|Ga0070683_101606214Not Available625Open in IMG/M
3300005535|Ga0070684_101817247Not Available575Open in IMG/M
3300005615|Ga0070702_100701788All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300005616|Ga0068852_101692020Not Available655Open in IMG/M
3300005937|Ga0081455_10670194All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300005981|Ga0081538_10361673Not Available525Open in IMG/M
3300009094|Ga0111539_10572629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1315Open in IMG/M
3300009789|Ga0126307_10000761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales21197Open in IMG/M
3300009789|Ga0126307_10144350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus1903Open in IMG/M
3300009789|Ga0126307_10146605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1888Open in IMG/M
3300009789|Ga0126307_10226538All Organisms → cellular organisms → Bacteria1501Open in IMG/M
3300009789|Ga0126307_10651748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.850Open in IMG/M
3300009789|Ga0126307_10958240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia691Open in IMG/M
3300009840|Ga0126313_10077825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2399Open in IMG/M
3300009840|Ga0126313_10355526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.1155Open in IMG/M
3300009840|Ga0126313_11746987Not Available520Open in IMG/M
3300010036|Ga0126305_11029030All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales565Open in IMG/M
3300010037|Ga0126304_11232659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella jiaozuonensis513Open in IMG/M
3300010038|Ga0126315_10196127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1215Open in IMG/M
3300010038|Ga0126315_10298683All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria993Open in IMG/M
3300010038|Ga0126315_11252991Not Available504Open in IMG/M
3300010039|Ga0126309_10001044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria9637Open in IMG/M
3300010039|Ga0126309_10184260Not Available1145Open in IMG/M
3300010039|Ga0126309_10530383Not Available729Open in IMG/M
3300010039|Ga0126309_10730750Not Available639Open in IMG/M
3300010039|Ga0126309_11182105All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300010039|Ga0126309_11217581Not Available518Open in IMG/M
3300010039|Ga0126309_11267480Not Available509Open in IMG/M
3300010040|Ga0126308_10189228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.1318Open in IMG/M
3300010040|Ga0126308_10342444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.989Open in IMG/M
3300010040|Ga0126308_10600907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella jiaozuonensis750Open in IMG/M
3300010040|Ga0126308_10982923Not Available591Open in IMG/M
3300010040|Ga0126308_11129309Not Available553Open in IMG/M
3300010041|Ga0126312_10547313Not Available830Open in IMG/M
3300010041|Ga0126312_10854407All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300010041|Ga0126312_11294611Not Available539Open in IMG/M
3300010042|Ga0126314_10463426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales917Open in IMG/M
3300010044|Ga0126310_10190312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1341Open in IMG/M
3300010044|Ga0126310_10815613All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales719Open in IMG/M
3300010045|Ga0126311_11079849Not Available659Open in IMG/M
3300010166|Ga0126306_10139922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.1789Open in IMG/M
3300010166|Ga0126306_10142062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1776Open in IMG/M
3300012355|Ga0137369_10644488Not Available733Open in IMG/M
3300012469|Ga0150984_120193915All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter977Open in IMG/M
3300012897|Ga0157285_10293785Not Available550Open in IMG/M
3300013306|Ga0163162_12488275Not Available595Open in IMG/M
3300013307|Ga0157372_11838387Not Available696Open in IMG/M
3300013307|Ga0157372_12093614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082650Open in IMG/M
3300013308|Ga0157375_12725454Not Available591Open in IMG/M
3300018081|Ga0184625_10182083All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300018422|Ga0190265_10248619Not Available1824Open in IMG/M
3300018422|Ga0190265_10849200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1036Open in IMG/M
3300018422|Ga0190265_11637257All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300018429|Ga0190272_10110380All Organisms → cellular organisms → Bacteria1794Open in IMG/M
3300018432|Ga0190275_10225873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1790Open in IMG/M
3300018432|Ga0190275_10464610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1291Open in IMG/M
3300018432|Ga0190275_10648637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1108Open in IMG/M
3300018432|Ga0190275_12041269Not Available652Open in IMG/M
3300018433|Ga0066667_10496962Not Available1004Open in IMG/M
3300018466|Ga0190268_11227750Not Available624Open in IMG/M
3300018469|Ga0190270_11550746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria713Open in IMG/M
3300018469|Ga0190270_13429431All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella503Open in IMG/M
3300018476|Ga0190274_10037298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3388Open in IMG/M
3300018476|Ga0190274_11633076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. ITM-2016-00317738Open in IMG/M
3300018481|Ga0190271_10508160All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1317Open in IMG/M
3300019767|Ga0190267_10207399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria925Open in IMG/M
3300022756|Ga0222622_11021285Not Available608Open in IMG/M
3300025908|Ga0207643_11072985Not Available520Open in IMG/M
3300025944|Ga0207661_11317070All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300025972|Ga0207668_11199333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei → Conexibacter woesei DSM 14684682Open in IMG/M
3300026142|Ga0207698_10578786All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300026142|Ga0207698_10893413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales895Open in IMG/M
3300028587|Ga0247828_10404852Not Available786Open in IMG/M
3300028589|Ga0247818_10134539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1608Open in IMG/M
3300028590|Ga0247823_11163306Not Available578Open in IMG/M
3300028596|Ga0247821_10252421Not Available1060Open in IMG/M
3300028744|Ga0307318_10222413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter655Open in IMG/M
3300028778|Ga0307288_10313600Not Available626Open in IMG/M
3300028799|Ga0307284_10478406Not Available511Open in IMG/M
3300028802|Ga0307503_10477843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella jiaozuonensis667Open in IMG/M
3300028878|Ga0307278_10003198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter7975Open in IMG/M
3300028889|Ga0247827_10256207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria999Open in IMG/M
3300030006|Ga0299907_10023135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4714Open in IMG/M
3300030336|Ga0247826_10293510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1162Open in IMG/M
3300030336|Ga0247826_11293776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria587Open in IMG/M
3300030336|Ga0247826_11429928Not Available559Open in IMG/M
3300030336|Ga0247826_11702766Not Available515Open in IMG/M
3300031229|Ga0299913_10064398All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3526Open in IMG/M
3300031731|Ga0307405_10110074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1864Open in IMG/M
3300031740|Ga0307468_100369833Not Available1079Open in IMG/M
3300032080|Ga0326721_10596384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria671Open in IMG/M
3300032080|Ga0326721_10806880Not Available588Open in IMG/M
3300033551|Ga0247830_10532754Not Available926Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil33.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil23.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.75%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.75%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.92%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.92%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.92%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.92%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.92%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.92%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.92%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.92%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.92%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.92%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.92%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.92%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003267Sugarcane bulk soil Sample L1EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
soilL1_1014245923300003267Sugarcane Root And Bulk SoilMRTHSRTTWPLFAVVALVALVGLFILHGAASGVVLFADLLAFLGVGVYALAGEDVNDGCGGIAGGTSF*
Ga0063454_10159974313300004081SoilMRTHSRRIWPPFLPVAVLSILGLFILHGTAAGVVLLVALIGVILAAIYALAGEDVKDGCGGIGGGTSF*
Ga0062593_10018166023300004114SoilMRTHSRKVWPLFLLDAVLAAVALFVLHGVAAGVLTLVVFLAVIATAIYALAGEKVNDGAVGIGGGTSF*
Ga0063455_10025695923300004153SoilMRTHSRRLWPLFLADAMLACLGLFVLDGVAAGVVLFITLLAIIGTGIYGLAGETVHDGLAGIGGGTSY*
Ga0063455_10065315923300004153SoilMRTHSRKLWPLFAADAVLAVLGLVVLHGVVAGVVLLVGLLAVIGTGIYGLAGETVQDGAGGIAGGTNF*
Ga0062589_10111142213300004156SoilKVWPLFLLDAVLAAVALFVLHGVAAGVLTLVVFLAVIATAIYALAGEKVNDGAVGIGGGTSF*
Ga0062591_10269254113300004643SoilMRTHSRKLWPLFLADAVLAVLGLFVLHGVAAGVVLFVTFLTVIGTAIYGLAGEKVQDGAGGIAGGTNF*
Ga0070676_1042011613300005328Miscanthus RhizosphereMRTHSRRVWPLLAADAVPAILAVFVLDGAIAGVLAFVALLGLIGCAIYGLAGEKVQDGAGGIAGGTGY*
Ga0070683_10160621423300005329Corn RhizosphereMRTHSRTTWPLFAAVALVAVLGLFVLHGVAAGVVLFVDLLALIGVSVYALAGEDVNDGSGGIAGGTSF*
Ga0070660_10151758113300005339Corn RhizosphereMRTHSRRVWPLLAVDAVPAILAVFVLDGVIAGVLAFVALLGLLGCAIYGLAGEKVQDGAGGIAGGTGY*
Ga0070674_10078462923300005356Miscanthus RhizosphereWPLLAVDAVPAILAVFVLDGVIAGVLAFVALLGLLGCAIYGLAGEKVQDGAGGIAGGTGY
Ga0070684_10181724723300005535Corn RhizosphereMRTHSRRLWPLFLADAILAGLGLFVLDGVAAGVVLFITLLAVIGTGIYGVAGEDVKDGLGGIGGGTSY*
Ga0070702_10070178823300005615Corn, Switchgrass And Miscanthus RhizosphereMRTHSRKTWPLFLAFAALAAVGAFALHGVAAALVLFAAWLGLLGSAIYALTGEKVNDGAGGIAGGTMY*
Ga0068852_10169202013300005616Corn RhizosphereMRTNSRRTWPLFLLDAVLALLGLFVLHGVAAGVILFATFLAVIGTAIYGLAGEHVNDGCGGIGGGTSF*
Ga0081455_1067019423300005937Tabebuia Heterophylla RhizosphereMRTHSRKTWPLFVAVALLALLGGVVLDGIAAGVVSLLALIGLLVASIYALAGEDVQDGCGGIAGGTGF*
Ga0081538_1036167323300005981Tabebuia Heterophylla RhizosphereMRTHSRKIWPSFLAVALLGVLGVFVLDGVAAGVVCFAALMGLLGASIYALAGEEVRDGCGGIGGGTSF*
Ga0111539_1057262923300009094Populus RhizosphereMRTHSRTTWPLFAAVALVALLGLFVLHGTISGVVLFADLLAFIGVGVYALAGEDVNDGCGGIAGGTSF*
Ga0126307_1000076153300009789Serpentine SoilVRTHSRKTWPPFLAVAVIALLGLFVFDGVAAGVLLFGALLGVIGASIYALAGEDVKDGCGGIGGGTSF*
Ga0126307_1014435033300009789Serpentine SoilMRTHSRRTWPLFLAVAVVALLGVLVDDAAGGVLLFGAFLGVLGTCIYALAGEDVHDGCGGIAGGTGF*
Ga0126307_1014660543300009789Serpentine SoilMHTHSRRLWPFFLADAVLAAVGLFVLDGVASGVVLFGTLLAIIATAIYGLAGEKVNDGAVGIGGGTSY*
Ga0126307_1022653833300009789Serpentine SoilMCEVTDMRTHSRRTWPFFLADAVLAAVGLFVLDGVASGVVLFVVLLAVIGTAIYALKGEKVNDGAVGIGGGTSF*
Ga0126307_1065174823300009789Serpentine SoilMRTHSRRTWPLFTAVAAVAALGLFVLHGVAAGVVLLLALLGVIGAAIYALAGEKVNDGCGGIGGGTSF*
Ga0126307_1095824023300009789Serpentine SoilMRTHSRRTWPLFLADAVLALLGLVALHGIASGVVLLVALIGVILIGIYALAGEKVNDGACGIGGGTSF*
Ga0126313_1007782533300009840Serpentine SoilMRTHSRTTWPLFLGVAVVALVGLFVLDGTAAGVVLFGDFFALIGTSIYALAGENVQDGCGGIGGGTSF*
Ga0126313_1035552623300009840Serpentine SoilMRTHSRRTWPLFVTVAVVAALGLFVLHGVAAGAILLLAMLGVIGVAIYALAGEKVNDGCGGIGGGTSF*
Ga0126313_1174698723300009840Serpentine SoilMRTHSRRTWPLFVVDACLAVLGLFVLHGVVAGVVLLVTLLAVTGSCVYGLAGEKINDGAGPITGGTGF*
Ga0126305_1102903013300010036Serpentine SoilMRTHSRRTWPLFLADAVLALLGLVVLHGILGGVVLLVSMIAVILIAIYALAGETVNDGACGIGGGTSF*
Ga0126304_1123265923300010037Serpentine SoilVCEFTDMRNHSRTLWPLFLADAVLSAVGLFVLHGAVSGVVLFLALLGVIGIGIYGLAGEQVNDGAGGIGGGTSW*
Ga0126315_1019612723300010038Serpentine SoilMRTHSRKLWPLFLADAVLAALGLFVLHGTVAGVVLLITLLAVIGTAIYGLAGERVQDGLGGIAGGTSF*
Ga0126315_1029868313300010038Serpentine SoilRSHAGAFFEEPGMRTHSRRTWPLFTAVAAVAALGLFVLHGVAAGVVLLLALLGVIGAAIYALAGEKVNDGCGGIGGGTSF*
Ga0126315_1112618623300010038Serpentine SoilMRTHSRTTWPLFLGVAVVAVVGLFVLDGTAAGVVLFGDFFALIGTSIYALAGEN
Ga0126315_1125299123300010038Serpentine SoilMRTHSRRSWPGFLATAVLAVLGLFVLDGTVAGVILFVAFLGVIFTAIYALAGETVKDGAGGIGGGTSF*
Ga0126309_10001044123300010039Serpentine SoilMRTHSRRTWPLFLAVAVLSALGLLVFHGIAAGVILLVAFLGLIGTCIYALAGETVNDGLGGIAGGTSF*
Ga0126309_1018426033300010039Serpentine SoilMRTHSRKAWPPFLAVAVLAALGLFVLDGIAAGVVLLAALLGVIGAAIYALAGENDEETTGGIGVRASFWL*
Ga0126309_1053038323300010039Serpentine SoilHSRKTWPPFVAVALLVLLGGVVLDGIAAGVVSLVALIGVLIASVYALAGEDVQDGCGGIGGGTSF*
Ga0126309_1073075013300010039Serpentine SoilMRTHSRKLWPLFLADAVLAMLGLFVLDGVAAGVVLFFTLLAVIGTAIYGLAGETVHDGAGGIA
Ga0126309_1118210513300010039Serpentine SoilGDPMRTHSRKSWPLFLAVVAVAALGIFVLHGVAAGLVLFVAWLGLLGAAIRALAGEKVNDGAGGIAGGTSF*
Ga0126309_1121758123300010039Serpentine SoilMRTHSRKLWPLFLADAVLAALGLFVLDGTVAGVVLFITLLAVIGTAIYGLAGERVQDGLGGIAGGTSF*
Ga0126309_1126748013300010039Serpentine SoilMRTHSRKSWPLFLADAVLAVLGLFVVHGIAAGVILLVALLGLNAACIYALAGENVRDGV
Ga0126308_1018922833300010040Serpentine SoilVRTRSRKTWPPFLAVAVIALLGLFVFDGVAAGVLLFGALLGVIGASIYALAGEDVKDGCGGIGGGTSF*
Ga0126308_1034244423300010040Serpentine SoilMRTHSRRTWPLFTAVAAVAALGLFVLHGVVAGVVLLLALLGVIGAAIYALAGEKVNDGCGGIGGGTSF*
Ga0126308_1060090713300010040Serpentine SoilMRTHSRRTWPFFLADAVLAAVGLFVLDGVASGVVLFVVLLAVIGTAIYALKGEKVNDGAVGIGGGTSF*
Ga0126308_1098292313300010040Serpentine SoilMRTHSRKTWPLFLAVAVVAALGLFVFDGVAAGVLLFGAFLGVIGASIYALAGEDVKDGCGGIGGGTSF*
Ga0126308_1112930923300010040Serpentine SoilMRTHSRRTWPLFLAVAVVAALGIFVVHGAAAGVVLLVDMLALLGTCIYALAGEKVNDGAGGIAGGTSF*
Ga0126312_1054731323300010041Serpentine SoilMRTHSRKSWPLFLAVVAVAALGIFVLHGVAAGLVLFVAWLGLLGAAIRALAGEKVNDGAGGIAGGTSF*
Ga0126312_1085440723300010041Serpentine SoilMRTHSRKTWPPFVAVAVLALLGGVVLHGTAAGVVSFLTLIALLRASIYALAGEDVQDGCGGIGGGTSY*
Ga0126312_1129461113300010041Serpentine SoilMRTHSRPLWPLFAADTVLALLGLFVLHGVAAGVVLFIVLLALIGTGIYGLAGEKVNDGAGGIAGGTNF*
Ga0126314_1046342623300010042Serpentine SoilMRTHSRTTWPLFLGVAVVAVVGLFVLDGTAAGVVLFGDFFALIGTSIYALAGENVQDGCGGIGGGTSF*
Ga0126310_1019031213300010044Serpentine SoilMRTHSRKLWPLFLADAVLACLGLFVLHGVAAGVVLFVTLLAIIGTGIYGLAGETVHDGAGGIGGGTSY*
Ga0126310_1081561323300010044Serpentine SoilMRTHSRRSWPLFLADAVLALLGLVVLHGIASGVVLLVAMIGVILIGIYALAGETVNDGACGIGGGTSF*
Ga0126311_1107984923300010045Serpentine SoilMRTHSRRSWPGFLAAAVLAVLGLFVLDGTAAGVILLVAFLGVIFTAIYALAGETVKDGAGGIGGGTSF*
Ga0126306_1013992213300010166Serpentine SoilMRNHSRTLWPLFLADAVLSAVGLFVLHGAVSGVVLFLALLGVIGIGIYGLAGEQVNDGAGGIGGGTSW*
Ga0126306_1014206213300010166Serpentine SoilSRRLWPLFVADAVLAATGLFVLHGVASGAVLFVTLLAIIGTAIYGLAGETVNDGAVGIGGGTSF*
Ga0137369_1064448813300012355Vadose Zone SoilMRTHSRRTWPLFAAVAVLGLLGLFVLDGTAAGVVLFAALLGLIGTAIYALSGEDVKDGAG
Ga0150984_12019391513300012469Avena Fatua RhizosphereAVAVLVVLGLLVFDGVAAGVVCFIALLGLIGAAINALRGEKVNDGLGGIGGGTSY*
Ga0157285_1029378513300012897SoilVRTHSRRTWPLFLADGVLAVLGLFVFHGTAAGVILFGALLAVIGTAIYGLAGEQVNDGCGGIGGGTSF*
Ga0163162_1248827523300013306Switchgrass RhizosphereMRTHSRTTWPLFAAVALVALLGLFVLHGAISGVVLFADLLAFIGVGVYALAGEDVNDGCGGIAGGTSF*
Ga0157372_1183838713300013307Corn RhizosphereMRTHSRKVWPLFLLDAVLAAVALFVLHGVAAGVLTLVVFLAVIATAIYALAGEKVNDGAVGIGGATSF*
Ga0157372_1209361423300013307Corn RhizosphereMRTHSRKTWPLFLLDAVLALLGLFVLHGVAAGVILFATFLAVIGTAIYGLAGEHVNDGCGGIGGGTSF*
Ga0157375_1272545413300013308Miscanthus RhizosphereMRTNSRRTWPLFLLDAVLALLGLFVLHGIAAGVILLVTLLAVIGTGIYALAGEHVN
Ga0132258_1250124033300015371Arabidopsis RhizosphereMRTHSRRVWPLLAVDAVPAILAVFVLDGVIAGVLAFVALLGLLGCAIYGLAGEKVQDGAGGIAGG
Ga0184625_1018208323300018081Groundwater SedimentMRTHSRKIWPPFLAVALLALLGVFVLDGVAAGVVSFVALIGLLGASIYALAGEKVQDGCGGIGGGTSF
Ga0190265_1012215633300018422SoilMRTHSRRVWPLFAADALTAALAFFVFDGAIAGVLSFVAWLGLLGCVIYSLAGERVQDGCGGVAGGTGF
Ga0190265_1024861923300018422SoilMRTHSRRTWPLFLVVAVLGVLGGVVLDGVAAGVVSFVAMIALLGASIYALAGEKVQDGCGGIAGGVGY
Ga0190265_1084920023300018422SoilVRTHSRKTWPLFLAVAVLVVLGVFVVHGIAAGVLLFGAFIGLLGVCIYALAGEDVQDGCGGIAGGTSF
Ga0190265_1163725723300018422SoilMRTHSRKLWPLFLVSGVVAVLGLFVVDGVAAGVLTLVGVLGVLGAAIYGLAGEDVNDSAGGIGGLGGW
Ga0190272_1011038033300018429SoilMRTHSRKLWPLFLVSGVVAVLGLFVLDGVVAGVLSLVACVGLLGTAIYALAGEDVNDGAGGLGGLGGW
Ga0190275_1022587313300018432SoilMRTHSRKIWPLALGDAVLALLGLFVLHGIAAGVILLGALLAVIGTAIYALAGEPVNDGCGGIGGGTGF
Ga0190275_1046461023300018432SoilMRTHSRRIWPPFLAVAVLSALGLFVLHGTAAGVVLLAALIGVILAGIYGLAGEDVKDGCGGIGGGTSF
Ga0190275_1064863723300018432SoilMRTHSRKLWPLFLLSGVVAVLGLFVVDGVAAGVMTLVGVLGVLGTAIYGLAGEDVKDSAGGIGGLAGW
Ga0190275_1204126923300018432SoilMGRAVCESVGMRTHSRKLWPLWLADAVLATVGLLVLHGVASGVVCFVALLAIIGTGIYGLAGEQVNDGAGGIAGGT
Ga0066667_1049696213300018433Grasslands SoilMRTHSRRLWPLFLADAVLAALGLFVLHGVAAGVVLFVTFLTVIGTAIYGLAGEKVQDGAGGIAGGTNF
Ga0190268_1122775023300018466SoilMRTHSRRIWPPFAAVAVLSALGLFVLHGTAAGVVLLAALIGVILAGIYGLAGEDVKDGCGGIGGGTSF
Ga0190270_1155074613300018469SoilGGAVSEPTAMRTHSRRLWPLWLVDAVLAAVGLLLLHGVASGVVCLVALLATIGTGIYGLAGETVNDGAGGIGGGTSF
Ga0190270_1157193213300018469SoilMRTHSRRVWPLLAADAVPAILAVFVLDGAIAGVLAFVALLGLIGCAIYGLAGEKVQDGAGGIAGGTGY
Ga0190270_1342943123300018469SoilVCESVGMRTHSRKLWPLWLADAVLATVGLLVLHGVASGVVCFVALLAIIGTGIYGLAGEQVNDGAGGIAGGTNY
Ga0190274_1003729853300018476SoilMGRAVCESVGMRTHSRKLWPLWLADAVLATLGLLVLHGVASGVVCFVALLAIIGTGIYGLAGEQVNDGAGGIAGGTNY
Ga0190274_1163307623300018476SoilRRSQRGGPCEVPDMRTHSRRIWPPFLAVAVLSALGLFVLHGTAAGVVLLAALIGVILAGIYGLAGEDVKDGCGGIGGGTSF
Ga0190271_1050816023300018481SoilVCEPAAMRTHSRRLWPLWLVDAVLAAVGLLLLHGVASGVVCLVALLATIGTGIYGLAGETVNDGAGGIGGGTSF
Ga0190267_1020739923300019767SoilMRTHTRRIWPPFAAVAVLSALGLFVLHGTAAGVVLLAALIGVILAGIYGLAGEDVRDGCGGIGGGTSF
Ga0222622_1102128523300022756Groundwater SedimentMRTHSRRIWPPFLAVALLAVLALFVLDGVAAGVVSFVALIALLGAAIYALAGENVRDGCGGIGGGTSF
Ga0207688_1037814723300025901Corn, Switchgrass And Miscanthus RhizosphereMRTHSRRVWPLLAVDAVPAILAVFVLDGVIAGVLAFVALLGLLGCAIYGLAGEKVQDGAGGIAGGTGY
Ga0207643_1107298523300025908Miscanthus RhizosphereMRTNSRRTWPLFLLDAVLALLGLFVLHGIAAGVILLVTLLAVIGTGIYALAGEHVNDGCGGIGGGTSF
Ga0207687_1098532913300025927Miscanthus RhizosphereLAADAVPAILAVFVLDGAIAGVLAFVALLGLIGCAIYGLAGEKVQDGAGGIAGGTGY
Ga0207661_1131707023300025944Corn RhizosphereMRTHSRRLWPLFLADAILAGLGLFVLDGVAAGVVLFITLLAIIGTGIYGVAGEDVKDGLGGIGGGTSY
Ga0207668_1119933313300025972Switchgrass RhizosphereIFLLHRSQRNRSREETVMRTNSRRTWPLFLLDAVLALLGLFVLHGIAAGVILLVTLLAVIGTGIYALAGEHVNDGCGGIGGGTSF
Ga0207698_1057878613300026142Corn RhizosphereMRTHSRTTWPLFAAVALVAVLGLFVLHGVAAGVVLFVDLLALIGVSVYALAGEDVNDGCGGIAGGTSF
Ga0207698_1089341313300026142Corn RhizosphereMRTNSRRTWPLFLLDAVLALLGLFVLHGIAAGVILLVTLLAVIGTGIYALAGEHVNDG
Ga0247828_1040485223300028587SoilMRTHSRTTWPLFAAVALVALLGLFVLHGAISGVVLFADLLAFIGVGVYALAGEDVNDGCGGIAGGTSF
Ga0247818_1013453923300028589SoilMRTHSRTTWPLFAAVALVALLGLFVLHGTISGVVLFADLLAFIGVGVYALAGEDVNDGCGGIAGGTSF
Ga0247823_1116330613300028590SoilHQWSQPRAVREGVDMRTHSRTTWPLFAAVALVALLGLFVLHGAISGVVLLADLLAFIGVGVYALAGEDVNDGCGGIAGGTSF
Ga0247821_1025242133300028596SoilMRTHSRRIWPPFLAVAVLSALGLFVLHGAAAGVVLLVALIGVILAGIYGLAGEDVKDGCGGIGGGTSF
Ga0307318_1022241323300028744SoilMRTHSRKTWPLFLAVGVISVLGLVVVHGIAAGVILFVALIALIGTCIYALAGEQVNDGCGGIGGGTSF
Ga0307288_1031360023300028778SoilMRTHSRRLWPLFLADAVLACLGLFVLDGVAAGVVLFVTLLAIIGTGIYGLAGESVRDGAGGI
Ga0307284_1047840613300028799SoilMRTHSRKTWPLFVADAVLAALGLFFLHGIAAGVVLFVTFLAVIGTAIYGLAGETVQDGAGGIAGGTSF
Ga0307503_1047784313300028802SoilVCESVAMRTHSRRLWPLFLADAVLAAVGVLVLDGVASGVVLLVALLAIIGTAIYGVAGEKVNDGAAGIGGGTSF
Ga0307278_1000319833300028878SoilMRTHSRKTWPPFLAVALLALLGVFALDGVAAGVVSFVALIGLLGASIYALAGEEVRDGCGGIGGGTNF
Ga0247827_1025620723300028889SoilMCEVTGMRTNSRRIWPLFLADAVIAAVGLFVLRGSASGVVLFVAMLGVIGIAIYALAGEKVNDGAAGIGGGTSF
Ga0299907_1002313563300030006SoilMRTHKRKVWPLFLADGVVAVLALFVFDGVAGGVLSMLALLGVLGTSIYALAGEDVNDGAGGIAGGTGW
Ga0247826_1029351033300030336SoilRVTVIFLLHRSQRNRSREETVMRTNSRRTWPLFLLDAVLALLGLFVLHGIAAGVILLVTLLAVIGTGIYALAGEHVNDGCGGIGGGTSF
Ga0247826_1129377623300030336SoilMRTHSRRIWPPFLAVALLAVLALFVLDGVAAGVVSFVALIALLGAAIYALAGEDVRDGCGGIGGGTSF
Ga0247826_1142992813300030336SoilAVREGVGMRTHSRTTWPLFAAVALVALLGLFVLHGAASGVVLFADLLAFLGVGVYALAGEDVNDGCGGIAGGTSF
Ga0247826_1170276623300030336SoilMRTHSRRIWPPFAAVAVLGLLAVFALDGVAAGVVSFVALLGLLGASIYALAGEDVQDGCGGIGGGTSY
Ga0299913_1006439833300031229SoilMRTHKRKVWPLFLADGVVAVLALFVFDGVAGGVLSMVALLGVLGTSIYALAGEDVNDGAGGIAGGTGW
Ga0307405_1011007423300031731RhizosphereVRTHSRKTWPPFLAVAVIALLGLFVFDGVAAGVLLFGALLGVIGASIYALAGEDVKDGCGGIGGGTSF
Ga0307468_10036983313300031740Hardwood Forest SoilVCESVAMRTHSRRLWPLFLADAVLAAVGVLVLDGVASGVVLLVALLAVIGTAIYGVAGEKVNDGAAGIGGGTSF
Ga0326721_1059638423300032080SoilMRTHSRRTWPFIAAACLLGVLGGFVLDGVVAGVVCFVAMIALLLAAIYALAGEDVQDGCGGIGGGVSF
Ga0326721_1080688023300032080SoilVCEPAAMRTHSRRLWPLWLVDAVLAAVGLLLLHGVASGVVCLVALLATIGTGIYGLAGEKVNDGAGGIAGGTSF
Ga0247830_1053275423300033551SoilMRTHSRTTWPLFAAVALVALLGLFVLHGAASGVVLFADLLAFLGVGVYALAGEDVNDGCGGIAGGTSF

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.