Metagenome Family F088114

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Overview

Basic Information
Family ID	F088114
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	42 residues
Representative Sequence	MRIYLVFYVVLLELAPYNVLTIVLQLLEENELIKYKVEDIIN
Number of Associated Samples	8
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	69.72 %
% of genes from short scaffolds (< 2000 bps)	96.33 %
Associated GOLD sequencing projects	7
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (83.486 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated (99.083 % of family members)
Environment Ontology (ENVO)	Unclassified (99.083 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant corpus (99.083 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.49 %
All Organisms	root	All Organisms	16.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.49 %
Viruses	superkingdom	All Organisms → Viruses	14.68 %
cellular organisms	root	All Organisms → cellular organisms	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.68 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009500\|Ga0116229_10224139	All Organisms → Viruses → Predicted Viral	1609	Open in IMG/M
3300009500\|Ga0116229_10293103	Not Available	1376	Open in IMG/M
3300009500\|Ga0116229_10511452	Not Available	993	Open in IMG/M
3300009500\|Ga0116229_10560471	Not Available	942	Open in IMG/M
3300009500\|Ga0116229_10663685	Not Available	853	Open in IMG/M
3300009500\|Ga0116229_10674385	Not Available	845	Open in IMG/M
3300009500\|Ga0116229_10689954	Not Available	834	Open in IMG/M
3300009500\|Ga0116229_10799335	Not Available	765	Open in IMG/M
3300009500\|Ga0116229_10834253	Not Available	747	Open in IMG/M
3300009500\|Ga0116229_10849123	Not Available	739	Open in IMG/M
3300009500\|Ga0116229_10879736	Not Available	724	Open in IMG/M
3300009500\|Ga0116229_10884139	Not Available	722	Open in IMG/M
3300009500\|Ga0116229_10901816	Not Available	714	Open in IMG/M
3300009500\|Ga0116229_10920481	Not Available	705	Open in IMG/M
3300009500\|Ga0116229_10951833	Not Available	692	Open in IMG/M
3300009500\|Ga0116229_10955844	Not Available	690	Open in IMG/M
3300009500\|Ga0116229_10956817	Not Available	690	Open in IMG/M
3300009500\|Ga0116229_10967618	Not Available	685	Open in IMG/M
3300009500\|Ga0116229_10990484	Not Available	676	Open in IMG/M
3300009500\|Ga0116229_11023503	Not Available	663	Open in IMG/M
3300009500\|Ga0116229_11050835	Not Available	653	Open in IMG/M
3300009500\|Ga0116229_11075085	Not Available	645	Open in IMG/M
3300009500\|Ga0116229_11086619	Not Available	641	Open in IMG/M
3300009500\|Ga0116229_11086795	Not Available	641	Open in IMG/M
3300009500\|Ga0116229_11121710	Not Available	629	Open in IMG/M
3300009500\|Ga0116229_11219807	Not Available	600	Open in IMG/M
3300009500\|Ga0116229_11299337	Not Available	578	Open in IMG/M
3300009500\|Ga0116229_11317351	Not Available	574	Open in IMG/M
3300009500\|Ga0116229_11400083	Not Available	554	Open in IMG/M
3300009500\|Ga0116229_11416325	Not Available	551	Open in IMG/M
3300009500\|Ga0116229_11419419	Not Available	550	Open in IMG/M
3300009500\|Ga0116229_11507259	Not Available	531	Open in IMG/M
3300009500\|Ga0116229_11543767	Not Available	524	Open in IMG/M
3300009500\|Ga0116229_11560494	Not Available	521	Open in IMG/M
3300009500\|Ga0116229_11613514	Not Available	509	Open in IMG/M
3300009500\|Ga0116229_11657592	Not Available	501	Open in IMG/M
3300009510\|Ga0116230_10785199	Not Available	708	Open in IMG/M
3300009697\|Ga0116231_10154241	All Organisms → Viruses → Predicted Viral	1338	Open in IMG/M
3300009697\|Ga0116231_10155303	All Organisms → Viruses → Predicted Viral	1332	Open in IMG/M
3300009697\|Ga0116231_10173704	Not Available	1240	Open in IMG/M
3300009697\|Ga0116231_10276414	Not Available	934	Open in IMG/M
3300009697\|Ga0116231_10285730	Not Available	916	Open in IMG/M
3300009697\|Ga0116231_10288923	Not Available	910	Open in IMG/M
3300009697\|Ga0116231_10297892	Not Available	894	Open in IMG/M
3300009697\|Ga0116231_10343767	Not Available	823	Open in IMG/M
3300009697\|Ga0116231_10364510	Not Available	796	Open in IMG/M
3300009697\|Ga0116231_10406875	Not Available	748	Open in IMG/M
3300009697\|Ga0116231_10440984	Not Available	714	Open in IMG/M
3300009697\|Ga0116231_10457267	Not Available	700	Open in IMG/M
3300009697\|Ga0116231_10629967	Not Available	585	Open in IMG/M
3300009697\|Ga0116231_10671529	Not Available	565	Open in IMG/M
3300009697\|Ga0116231_10692072	Not Available	556	Open in IMG/M
3300009697\|Ga0116231_10754072	Not Available	530	Open in IMG/M
3300009701\|Ga0116228_10401244	Not Available	947	Open in IMG/M
3300009701\|Ga0116228_11199050	Not Available	500	Open in IMG/M
3300009709\|Ga0116227_10197083	All Organisms → Viruses → Predicted Viral	1566	Open in IMG/M
3300009709\|Ga0116227_10292168	All Organisms → Viruses → Predicted Viral	1248	Open in IMG/M
3300009709\|Ga0116227_10362222	All Organisms → Viruses → Predicted Viral	1107	Open in IMG/M
3300009709\|Ga0116227_10401583	Not Available	1044	Open in IMG/M
3300009709\|Ga0116227_10404926	All Organisms → Viruses → Predicted Viral	1040	Open in IMG/M
3300009709\|Ga0116227_10418717	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300009709\|Ga0116227_10555967	Not Available	870	Open in IMG/M
3300009709\|Ga0116227_10589767	Not Available	842	Open in IMG/M
3300009709\|Ga0116227_10589873	Not Available	842	Open in IMG/M
3300009709\|Ga0116227_10617717	Not Available	821	Open in IMG/M
3300009709\|Ga0116227_10721112	Not Available	753	Open in IMG/M
3300009709\|Ga0116227_10722003	Not Available	752	Open in IMG/M
3300009709\|Ga0116227_10726560	Not Available	750	Open in IMG/M
3300009709\|Ga0116227_10746746	Not Available	738	Open in IMG/M
3300009709\|Ga0116227_10798808	Not Available	711	Open in IMG/M
3300009709\|Ga0116227_10801949	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	710	Open in IMG/M
3300009709\|Ga0116227_10895927	Not Available	668	Open in IMG/M
3300009709\|Ga0116227_10914612	Not Available	661	Open in IMG/M
3300009709\|Ga0116227_11109970	Not Available	595	Open in IMG/M
3300009709\|Ga0116227_11134986	Not Available	588	Open in IMG/M
3300009709\|Ga0116227_11158697	Not Available	581	Open in IMG/M
3300009709\|Ga0116227_11163183	All Organisms → cellular organisms → Eukaryota → Opisthokonta	580	Open in IMG/M
3300009709\|Ga0116227_11222563	Not Available	564	Open in IMG/M
3300009709\|Ga0116227_11361256	Not Available	533	Open in IMG/M
3300009709\|Ga0116227_11413836	Not Available	522	Open in IMG/M
3300009709\|Ga0116227_11452440	Not Available	515	Open in IMG/M
3300009709\|Ga0116227_11507593	Not Available	503	Open in IMG/M
3300009787\|Ga0116226_11266937	Not Available	695	Open in IMG/M
3300027860\|Ga0209611_10097902	All Organisms → Viruses → Predicted Viral	1985	Open in IMG/M
3300027860\|Ga0209611_10128298	All Organisms → Viruses → Predicted Viral	1645	Open in IMG/M
3300027860\|Ga0209611_10130925	All Organisms → Viruses → Predicted Viral	1622	Open in IMG/M
3300027860\|Ga0209611_10138016	All Organisms → Viruses → Predicted Viral	1565	Open in IMG/M
3300027860\|Ga0209611_10170859	All Organisms → Viruses → Predicted Viral	1356	Open in IMG/M
3300027860\|Ga0209611_10187281	Not Available	1276	Open in IMG/M
3300027860\|Ga0209611_10199988	All Organisms → Viruses → Predicted Viral	1223	Open in IMG/M
3300027860\|Ga0209611_10202179	Not Available	1215	Open in IMG/M
3300027860\|Ga0209611_10239045	All Organisms → Viruses → Predicted Viral	1090	Open in IMG/M
3300027860\|Ga0209611_10261828	All Organisms → Viruses → Predicted Viral	1029	Open in IMG/M
3300027860\|Ga0209611_10300729	Not Available	943	Open in IMG/M
3300027860\|Ga0209611_10388002	Not Available	802	Open in IMG/M
3300027860\|Ga0209611_10408504	Not Available	776	Open in IMG/M
3300027860\|Ga0209611_10416197	Not Available	767	Open in IMG/M
3300027860\|Ga0209611_10433056	Not Available	748	Open in IMG/M
3300027860\|Ga0209611_10499960	Not Available	683	Open in IMG/M
3300027860\|Ga0209611_10529788	Not Available	658	Open in IMG/M
3300027860\|Ga0209611_10535014	Not Available	654	Open in IMG/M
3300027860\|Ga0209611_10653355	Not Available	575	Open in IMG/M
3300027860\|Ga0209611_10706902	Not Available	545	Open in IMG/M
3300027860\|Ga0209611_10728671	Not Available	534	Open in IMG/M
3300027860\|Ga0209611_10760386	Not Available	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	99.08%
Environmental	Environmental	0.92%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	99.08%
Aquatic	Environmental → Aquatic	0.92%

Habitat	Taxonomy	Distribution
Peat Moss	Host-Associated → Plants → Peat Moss	99.08%
Freshwater	Environmental → Aquatic → Freshwater	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	99.08%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	99.08%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	99.08%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300018414	Freshwater sediment microbial communities in response to fracking from North America - Little Laurel Run_MetaG_LLRF_2013	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116229_101496601	3300009500	Host-Associated	INLVFYISLLEPVPRNILTIALELVEENKTIKYEIKDIKE*
Ga0116229_102241391	3300009500	Host-Associated	MRIYLIFYVVLLELVLYNVLTIILELLEENKTIEYEVEDIIN*
Ga0116229_102931031	3300009500	Host-Associated	MRIYLVFYVVLLELVLPNILTIALQLLGKNKTIEYEVEDIIN*
Ga0116229_105114521	3300009500	Host-Associated	IVLLELVLHNVLTIVLQLLEENKLIKYEVENIIN*
Ga0116229_105604711	3300009500	Host-Associated	YLVFYIVLLELVPYNILTIVLQLSKENKLIEYKVKDIID*
Ga0116229_106636851	3300009500	Host-Associated	IYLVFYVALLELAPYDVLTIVLQLLGENKLIEYKVEDIIN*
Ga0116229_106743851	3300009500	Host-Associated	PKYIRIYLVFYVVLLELVPHNILIITLQLSEENKLIEYKVEDIIN*
Ga0116229_106899541	3300009500	Host-Associated	MRIYLVFYVVLLELAPYNALTITLQLSEENEIIKYKVEDIIN*
Ga0116229_107878151	3300009500	Host-Associated	YLVFYIVLLELVLHNILTIVLQLLEENKTIKYEVEDIIN*
Ga0116229_107993351	3300009500	Host-Associated	YVALLELVPHNALTITLRLLKENKLIEYKVEDIIN*
Ga0116229_108342531	3300009500	Host-Associated	LKLPKYIRIYLVFYVVLLELVLYNVLTIVLQLLEENKLIKYKVEDIIN*
Ga0116229_108491231	3300009500	Host-Associated	MRIYLVFYVVLLELVPYNTPTIVLQLLEKNKLIKYKVEDI
Ga0116229_108797361	3300009500	Host-Associated	IRIYLVFYVVLLELVLYNVLTIVLQLLEENELIKYEVKDIIN*
Ga0116229_108841391	3300009500	Host-Associated	MRIYLVFYVALLELALLDAPTIVLQLLDKNETIKYEVDDIIN*
Ga0116229_109018161	3300009500	Host-Associated	LPKYIQIYLVFYVVLLELVLYNVLTIVLQLFKENKLIKYKVEDIIN*
Ga0116229_109204811	3300009500	Host-Associated	IVLLKLAPYSALTIILQLLEENELIKYEVEDIIN*
Ga0116229_109518331	3300009500	Host-Associated	RIYLVFYIVLLELAPHNALTIAPQLLEENKLIEYEVENIIN*
Ga0116229_109558442	3300009500	Host-Associated	YIVLLELAPYNVLTIVLQLFEENELIEYKVEDIID*
Ga0116229_109568171	3300009500	Host-Associated	MRIYLVFYVVLLELVPYNVLTIVLQLSKENETIKYEVEDIID*
Ga0116229_109676181	3300009500	Host-Associated	MRIYLVFYVALLELVLHNVLTIVLQLLDENKTIEYEVEDVIN*
Ga0116229_109904841	3300009500	Host-Associated	YLVFYIVLLELVLYNVLTIVLQLSKENKLIKYEVEDIIN*
Ga0116229_110235031	3300009500	Host-Associated	MQIYLVFYIVLLELAPHNVLTIVLQLLEENELIEYKVKDIINQFVRDS*
Ga0116229_110508351	3300009500	Host-Associated	LKLPKYIRIYLVFYVVLLELVPHNVLTIVLQLSEENKLIEYKVEDIIN*
Ga0116229_110750851	3300009500	Host-Associated	LVFYVVLLELVPYNVLTIVLQLSKKNKLIKYEVEDIIN*
Ga0116229_110866191	3300009500	Host-Associated	IYLVFYVVLLELAPYSTPTIVLQLLEENELIKYKVKDIID*
Ga0116229_110867951	3300009500	Host-Associated	LKLPKYIRIYLVFYIVLLELVLHNVLTIILQLLEENETIKYEVEDIIN*
Ga0116229_111217101	3300009500	Host-Associated	IYLVFYIALLELAPYDVLTIVLQLSKENKLIEYKVEDIIN*
Ga0116229_112198071	3300009500	Host-Associated	IRIYLVFYIVLLELVPYNVLTIALQLLEENELIKYKVEDIVD*
Ga0116229_112993371	3300009500	Host-Associated	VFYIVLLELVPYNILTIVLQLLKENKLIKYKVEDIIN*
Ga0116229_113173511	3300009500	Host-Associated	IYLVFYVVLLELVLHNAPTIVLQLLDKNKIIKYKVEDIIN*
Ga0116229_114000831	3300009500	Host-Associated	RLKLPKYMRIYLVFYVALLELVPRDVLTIVLQLSGENELIKYKVEDIID*
Ga0116229_114163251	3300009500	Host-Associated	MRIYLVFYIALLELVPHDVLTIVLQLSEENKLIKYKVEDIIN
Ga0116229_114194191	3300009500	Host-Associated	LKLPKHIQIYLVFYIALLELVPYNTLTIVLQLSEENELIEYKVEDIID*
Ga0116229_115072591	3300009500	Host-Associated	MRIYLVFYIALLELVPYNVLTIILQLLEENEIIKYEVEDIIN*
Ga0116229_115437671	3300009500	Host-Associated	IRIYLVFYIVLLELVPYNILTIVLQLFKENELIKYKVKDIIN*
Ga0116229_115604941	3300009500	Host-Associated	MRIYLVFYVVLLELAPYNVLTIVLQLLEENELIKYKVEDIIN
Ga0116229_116135141	3300009500	Host-Associated	LVFYVVLLELVPYNVLTIVLQLLEENRLIKYKVKNIIN*
Ga0116229_116575921	3300009500	Host-Associated	QIYLVFYVVLLELVLYNILTIALQLSKENKIIKYEVEDIIN*
Ga0116230_107851992	3300009510	Host-Associated	MYINLVFYVVLLELVPYNIPIIVLDLLDENETIKYEVEDVIN*
Ga0116231_101542411	3300009697	Host-Associated	MRIYLVFYVALLELALHNALTIVLQLLEENKLIKYEVEDIIN*
Ga0116231_101553031	3300009697	Host-Associated	LKLPKYMRIYLVFYIVLLELVLYNVLTIILQLLEENKLIKYKVEDIIN*
Ga0116231_101737041	3300009697	Host-Associated	MQIYLVFYVVLLELAPYNILTIVLQLLEENKLIEYKVEGIIN*
Ga0116231_102764141	3300009697	Host-Associated	KLPKYIRIYPVFYIVLLELVPYNILTIILQLLKENKLIKYKVKDIIS*
Ga0116231_102857301	3300009697	Host-Associated	MRIYLVFYIVLLELAPHNVLTIVLQLSEENKLIKYKVENIIN*
Ga0116231_102889231	3300009697	Host-Associated	MRIYLVFYVALLELVPYNTLTIAPQLLEENKLIEYEVENIID*
Ga0116231_102978921	3300009697	Host-Associated	YLVFYVVLLELVLYNVLTIVLQLLEENKLIKYKVKDIIN*
Ga0116231_103437672	3300009697	Host-Associated	KYIRIYLVFYVVLLELVPYNVLTIILQLLEENKLIKYKVEDVIN*
Ga0116231_103645101	3300009697	Host-Associated	MRIYLVFYVVLLELAPYNVLTIVLQLSEKNKLIKYKVEDIIN*
Ga0116231_104068751	3300009697	Host-Associated	MQIYLVFYIVLLELVSYNILTIILQLSKENKLIKYEVKDIIN*
Ga0116231_104409841	3300009697	Host-Associated	YIRIYLVFYVVLLELVPYNILTIVLQLLKENKLIEYKVEDIIN*
Ga0116231_104572671	3300009697	Host-Associated	FYVVLLELAPHNVLTIVLQLLEENELIKYKVEDIID*
Ga0116231_106299671	3300009697	Host-Associated	MRIYLVFYIVLLELVPYNILIIILQLLEENKLIKYEVEDIIN*
Ga0116231_106715291	3300009697	Host-Associated	QIYLVFYVVLLELAPYNVLTIVLQLLKENKLIKYKVEDVVD*
Ga0116231_106920721	3300009697	Host-Associated	IYLVFYIVLLELALYNVLTIVLQLLEENKLIEYEVEDIIN*
Ga0116231_107540721	3300009697	Host-Associated	LPKHIQIYLVFYIVLLELVPYNVLTIVLQLLEENELIEYKVEDIIN*
Ga0116228_104012441	3300009701	Host-Associated	MRIYPVFYVVLLEPAPYNTLIIVLDLSEENKTIKYKVEDIIN*
Ga0116228_111990501	3300009701	Host-Associated	PVFYVILLELVPYNIPVIVLDLLNKNKTIEYEVEDVIN*
Ga0116227_101970831	3300009709	Host-Associated	MRIYLVFYVVLLELAPYNVLTIVLQLLEENKLIEYKVEDI
Ga0116227_102921681	3300009709	Host-Associated	RIYLVFYVVLLELVLLNTPTIVLQLSKKNEIIKYKVEDIIN*
Ga0116227_103622221	3300009709	Host-Associated	LPKYIRIYLVFYIVLLELVPYNVLIIILQLLENKLIKYKVGDIIN*
Ga0116227_104015831	3300009709	Host-Associated	PKYIRIYLVFYIVLLELVPHNVLTIILQLLEENELIEYKVEDIID*
Ga0116227_104049261	3300009709	Host-Associated	YIVLLELVLYNVLTIVLQLSEENKLIKYKVEDIIN*
Ga0116227_104187172	3300009709	Host-Associated	RLKLPKHMRIYLVFYIVLLELVPLNTPTIVLQLLEENKLIKYEVEDIID*
Ga0116227_105559671	3300009709	Host-Associated	VFYIVLLELVLYNVLTIAPQLLEENELIKYKVEDIIN*
Ga0116227_105717561	3300009709	Host-Associated	YLVFYVVLLELVLLNILTIALDLSKDNKLIEYKVEDIIN*
Ga0116227_105897671	3300009709	Host-Associated	LKLPKYMRIYLVFYVVLLELVLYNALTIILQLSEENKLIEYEVKDIIN*
Ga0116227_105898731	3300009709	Host-Associated	YIALLELVPYNVLTIVLQLLDKNELIEYKVEDIIN*
Ga0116227_106177171	3300009709	Host-Associated	IYLVFYIVLLELVPYNVLTIVLQLLEENELIEYKVEDIIS*
Ga0116227_107211121	3300009709	Host-Associated	MQIYLVFYIALLELVLHNVLTIVLQLLEENKLIKYEVE
Ga0116227_107220031	3300009709	Host-Associated	IYLVFYIVLLELVPYNVLTIALQLFEENELIKYKVEDIID*
Ga0116227_107265602	3300009709	Host-Associated	VFYVVLLELVFYNVLTIILQLLEENKLIKYKVKDIIN*
Ga0116227_107467461	3300009709	Host-Associated	YLVFCIVLLELAPYNGLTIALQLSEENELIKYKVEDIIN*
Ga0116227_107988081	3300009709	Host-Associated	IQIYLVFYIVLLELVLHNILTIVLQLLEENELIEYKVEDIIN*
Ga0116227_108019491	3300009709	Host-Associated	MRIYLVFYVVLLELVLHNVLTIILQLFEENEIIEYEVEDIIN*
Ga0116227_108959271	3300009709	Host-Associated	LPKYIRIYLVFYIVLLKLVPYNVLTIVLQLSKENELIKYKV*
Ga0116227_109146121	3300009709	Host-Associated	KLPKHIQIYLVFYVALLELVLYDILTIILQLLEENKLIKYKVEDIVN*
Ga0116227_111099701	3300009709	Host-Associated	IYLVFYVVLLELVLYNVLTIVLQLSKENELIKYKVEDITN*
Ga0116227_111349861	3300009709	Host-Associated	LLKHMRIYLVFYVVLLELVPYNALTIVLQLSEENELIKYEVKDIVN*
Ga0116227_111586971	3300009709	Host-Associated	LKLPKYIQIYLVFYIVLLELVPYNALIIILQLSKENELIKYKVEDIIS*
Ga0116227_111631831	3300009709	Host-Associated	MRIYLVFYVALLELAPLNILTIVLQLLEENELIEYEVEDIINQSIQNS*
Ga0116227_112225631	3300009709	Host-Associated	VFYVVLLELVLYNVLTIVLQLFKENKLIKYKVEDIIN*
Ga0116227_113612561	3300009709	Host-Associated	IRIYLVFYVALLELASPNTPTIVLQLLEENKTIKYKVEDIIN*
Ga0116227_114138361	3300009709	Host-Associated	YIVLLELVPYNVLTIVLQLLEENKLIEYKVEDIIN*
Ga0116227_114524401	3300009709	Host-Associated	MRIYLVFYVVLLELVPYNVLTIVLQLLEENKLIEYEVESIID*
Ga0116227_115075931	3300009709	Host-Associated	MRIYLVFYVALLELVPHNVLIIALQLLEENELIEY
Ga0116226_112669371	3300009787	Host-Associated	VFYITLLEQAPYNVLTITLDLSDENKTIKYKVKDIIN*
Ga0194135_106431381	3300018414	Watersheds	LLVNININLVFYISLLELVLRNIPVIILDLSKDNKLIKYKVEEILD
Ga0209611_100979021	3300027860	Host-Associated	MRIYLVFYVVLLELVLLNVLTIVLQLLQENEFIKYEVEDIIN
Ga0209611_101282981	3300027860	Host-Associated	MRIYLVFYVVLLELAPYNVLTIVLQLLEENELIKYKVEDIINQSVHNS
Ga0209611_101309251	3300027860	Host-Associated	MRIYLIFYVVLLELVLYNVLTIILELLEENKTIEYEVEDIIN
Ga0209611_101380161	3300027860	Host-Associated	MRIYLVFYIVLLELAPYNILTIILQLLEENKLIEYKV
Ga0209611_101708591	3300027860	Host-Associated	MQIYLVFYIVLLELAPHNVLTIVLQLLEENELIEYKVKDIINQFVRDS
Ga0209611_101872811	3300027860	Host-Associated	MRIYLVFYVVLLELVLPNILTIALQLLGKNKTIEYEVEDIIN
Ga0209611_101999881	3300027860	Host-Associated	MXIYLVFYVVLLELVLYNILTIVLQLLEENELIKYKVESIID
Ga0209611_102021791	3300027860	Host-Associated	MQIHLVFYVVLLELVLPNAPTIVLQLSEENEIIKYKVEDIIDQSV
Ga0209611_102390452	3300027860	Host-Associated	MRIYLVFYVVLLELVLHNVLTIVLQLSKENETIKYEVEDIID
Ga0209611_102618282	3300027860	Host-Associated	MRIYLVFYVALLELALLDAPTIVLQLLDKNETIKYEVDDIIN
Ga0209611_103007291	3300027860	Host-Associated	IYLVFYIVLLELVPYNILTIVLQLSKENKLIEYKVKDIID
Ga0209611_103880021	3300027860	Host-Associated	KYMRIYLVFYVVLLELAPYNVLTIALQLSDENEIIEYEVEDIID
Ga0209611_104085041	3300027860	Host-Associated	MRIYLVFYIALLELVPHDVLTIVLQLSEENKLIKYKVEDIINQSVYNS
Ga0209611_104161972	3300027860	Host-Associated	MRIYLVFYIALLELVPHNVLTIALQLSEENELIEYKVEDIID
Ga0209611_104330561	3300027860	Host-Associated	SLRQLPKYIQIYLVFYVVLLELVLYNVLTIVLQLFKENKLIKYKVEDIIN
Ga0209611_104999601	3300027860	Host-Associated	LKLPKYMRIYLVFYIVLLELVLHNVLTIVLQLLEENKLIEYKVEDIIN
Ga0209611_105297881	3300027860	Host-Associated	YMRIYLIFYVVLLELVLYNVPTITLQLLEENKLIKYEVEDIIN
Ga0209611_105350141	3300027860	Host-Associated	LPKYIQIYLVFYIVLLELVPYNVLTIVLQLLKENKLIKYKVKNIID
Ga0209611_106533551	3300027860	Host-Associated	IYFVFYIVLLELVPYNILTIVLQLLKENKLIKYKVEDIIN
Ga0209611_107069022	3300027860	Host-Associated	MRIYLVFYVVLLELAPYNALTITLQLSEENEIIKYKVEDIIN
Ga0209611_107286711	3300027860	Host-Associated	IYLVFYVVLLELVLHNAPTIVLQLLDKNKIIKYKVEDIIN
Ga0209611_107603861	3300027860	Host-Associated	IRIYLVFYVVLLELAPYNVLTIAPQLSDKNELIEYKVEDIID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088114

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences