Metagenome Family F088049

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088049
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	114 residues
Representative Sequence	MTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Number of Associated Samples	74
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.64 %
% of genes near scaffold ends (potentially truncated)	59.63 %
% of genes from short scaffolds (< 2000 bps)	78.90 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.550 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.294 % of family members)
Environment Ontology (ENVO)	Unclassified (79.817 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.24% β-sheet: 0.00% Coil/Unstructured: 45.76%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13148	DUF3987	4.59
PF13362	Toprim_3	2.75
PF04392	ABC_sub_bind	1.83
PF09250	Prim-Pol	1.83
PF13500	AAA_26	0.92
PF02075	RuvC	0.92
PF01642	MM_CoA_mutase	0.92
PF05119	Terminase_4	0.92
PF13519	VWA_2	0.92
PF13479	AAA_24	0.92
PF00589	Phage_integrase	0.92
PF01042	Ribonuc_L-PSP	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.83
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.92
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	0.92
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.92
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.55 %
All Organisms	root	All Organisms	39.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.55 %
cellular organisms	root	All Organisms → cellular organisms	39.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.10 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.55 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	11.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.83 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.55 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	4.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.83 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.92 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.92 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.55 %
Bradyrhizobium valentinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	4.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.83 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.92 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.92 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100091783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3463	Open in IMG/M
3300005332\|Ga0066388_100973455	Not Available	1416	Open in IMG/M
3300005332\|Ga0066388_102626736	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M
3300005713\|Ga0066905_100131132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1769	Open in IMG/M
3300005764\|Ga0066903_105230612	Not Available	686	Open in IMG/M
3300005764\|Ga0066903_106195153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	625	Open in IMG/M
3300005764\|Ga0066903_108833967	Not Available	511	Open in IMG/M
3300005764\|Ga0066903_109122411	Not Available	501	Open in IMG/M
3300010043\|Ga0126380_10949997	Not Available	719	Open in IMG/M
3300010046\|Ga0126384_10592049	Not Available	970	Open in IMG/M
3300010046\|Ga0126384_11231777	Not Available	691	Open in IMG/M
3300010358\|Ga0126370_10214400	Not Available	1466	Open in IMG/M
3300010361\|Ga0126378_10558435	Not Available	1259	Open in IMG/M
3300010362\|Ga0126377_11706354	Not Available	705	Open in IMG/M
3300010366\|Ga0126379_10000380	All Organisms → cellular organisms → Bacteria → Proteobacteria	24258	Open in IMG/M
3300010366\|Ga0126379_10342606	Not Available	1521	Open in IMG/M
3300010376\|Ga0126381_101955986	Not Available	845	Open in IMG/M
3300010398\|Ga0126383_10693133	Not Available	1096	Open in IMG/M
3300010868\|Ga0124844_1014635	Not Available	2087	Open in IMG/M
3300012971\|Ga0126369_13069413	Not Available	547	Open in IMG/M
3300012971\|Ga0126369_13722713	Not Available	500	Open in IMG/M
3300016294\|Ga0182041_11760614	Not Available	574	Open in IMG/M
3300016319\|Ga0182033_10000978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13931	Open in IMG/M
3300016319\|Ga0182033_10284198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1359	Open in IMG/M
3300016357\|Ga0182032_10469951	Not Available	1029	Open in IMG/M
3300016357\|Ga0182032_10826920	Not Available	784	Open in IMG/M
3300016357\|Ga0182032_11569835	Not Available	572	Open in IMG/M
3300016371\|Ga0182034_10039178	Not Available	3041	Open in IMG/M
3300016387\|Ga0182040_10710520	Not Available	822	Open in IMG/M
3300016387\|Ga0182040_11364769	Not Available	599	Open in IMG/M
3300016404\|Ga0182037_11014775	Not Available	723	Open in IMG/M
3300016404\|Ga0182037_11852835	Not Available	540	Open in IMG/M
3300016445\|Ga0182038_10017386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4240	Open in IMG/M
3300031543\|Ga0318516_10030571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2839	Open in IMG/M
3300031544\|Ga0318534_10361767	Not Available	835	Open in IMG/M
3300031545\|Ga0318541_10101630	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300031545\|Ga0318541_10170308	Not Available	1200	Open in IMG/M
3300031546\|Ga0318538_10000187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14814	Open in IMG/M
3300031546\|Ga0318538_10469627	Not Available	682	Open in IMG/M
3300031549\|Ga0318571_10261157	Not Available	640	Open in IMG/M
3300031561\|Ga0318528_10646466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	567	Open in IMG/M
3300031564\|Ga0318573_10090385	Not Available	1558	Open in IMG/M
3300031572\|Ga0318515_10434476	Not Available	702	Open in IMG/M
3300031572\|Ga0318515_10450858	Not Available	688	Open in IMG/M
3300031573\|Ga0310915_10701333	Not Available	714	Open in IMG/M
3300031573\|Ga0310915_11262333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	509	Open in IMG/M
3300031668\|Ga0318542_10034830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2197	Open in IMG/M
3300031679\|Ga0318561_10470417	Not Available	692	Open in IMG/M
3300031680\|Ga0318574_10011678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4016	Open in IMG/M
3300031681\|Ga0318572_10298187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	952	Open in IMG/M
3300031682\|Ga0318560_10147261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1245	Open in IMG/M
3300031719\|Ga0306917_10149781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1729	Open in IMG/M
3300031724\|Ga0318500_10663324	Not Available	530	Open in IMG/M
3300031736\|Ga0318501_10113056	Not Available	1367	Open in IMG/M
3300031744\|Ga0306918_10702297	Not Available	791	Open in IMG/M
3300031768\|Ga0318509_10228769	Not Available	1037	Open in IMG/M
3300031771\|Ga0318546_10510493	Not Available	844	Open in IMG/M
3300031771\|Ga0318546_11023077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	581	Open in IMG/M
3300031771\|Ga0318546_11297224	Not Available	511	Open in IMG/M
3300031778\|Ga0318498_10154666	Not Available	1044	Open in IMG/M
3300031778\|Ga0318498_10470124	Not Available	555	Open in IMG/M
3300031780\|Ga0318508_1107746	Not Available	777	Open in IMG/M
3300031792\|Ga0318529_10493283	Not Available	569	Open in IMG/M
3300031793\|Ga0318548_10232697	Not Available	905	Open in IMG/M
3300031797\|Ga0318550_10243662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	872	Open in IMG/M
3300031819\|Ga0318568_10203894	Not Available	1220	Open in IMG/M
3300031821\|Ga0318567_10881890	Not Available	507	Open in IMG/M
3300031832\|Ga0318499_10304322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	616	Open in IMG/M
3300031833\|Ga0310917_10470529	Not Available	855	Open in IMG/M
3300031835\|Ga0318517_10540352	Not Available	524	Open in IMG/M
3300031859\|Ga0318527_10124683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1070	Open in IMG/M
3300031860\|Ga0318495_10446092	Not Available	568	Open in IMG/M
3300031879\|Ga0306919_10082815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2216	Open in IMG/M
3300031879\|Ga0306919_10224163	Not Available	1406	Open in IMG/M
3300031879\|Ga0306919_10513089	Not Available	924	Open in IMG/M
3300031890\|Ga0306925_10003984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	13209	Open in IMG/M
3300031890\|Ga0306925_10115256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2871	Open in IMG/M
3300031890\|Ga0306925_10278637	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300031890\|Ga0306925_10320968	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300031894\|Ga0318522_10266846	Not Available	649	Open in IMG/M
3300031896\|Ga0318551_10648685	Not Available	610	Open in IMG/M
3300031910\|Ga0306923_10194459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2318	Open in IMG/M
3300031912\|Ga0306921_10005064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	13633	Open in IMG/M
3300031912\|Ga0306921_10013404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8816	Open in IMG/M
3300031912\|Ga0306921_10543940	Not Available	1347	Open in IMG/M
3300031945\|Ga0310913_10080381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2176	Open in IMG/M
3300031945\|Ga0310913_10096763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1991	Open in IMG/M
3300031945\|Ga0310913_10308307	Not Available	1117	Open in IMG/M
3300031946\|Ga0310910_10005104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	7793	Open in IMG/M
3300031947\|Ga0310909_10001216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14873	Open in IMG/M
3300031947\|Ga0310909_10175466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1772	Open in IMG/M
3300031954\|Ga0306926_10365401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1783	Open in IMG/M
3300032001\|Ga0306922_10004432	All Organisms → cellular organisms → Bacteria → Proteobacteria	13293	Open in IMG/M
3300032035\|Ga0310911_10303099	Not Available	919	Open in IMG/M
3300032039\|Ga0318559_10405128	Not Available	636	Open in IMG/M
3300032042\|Ga0318545_10301698	Not Available	576	Open in IMG/M
3300032051\|Ga0318532_10124236	Not Available	914	Open in IMG/M
3300032059\|Ga0318533_10122100	All Organisms → cellular organisms → Bacteria	1822	Open in IMG/M
3300032068\|Ga0318553_10146858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1220	Open in IMG/M
3300032068\|Ga0318553_10566303	Not Available	595	Open in IMG/M
3300032076\|Ga0306924_11667059	Not Available	669	Open in IMG/M
3300032076\|Ga0306924_12313496	Not Available	544	Open in IMG/M
3300032094\|Ga0318540_10576234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	542	Open in IMG/M
3300032261\|Ga0306920_103643300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum	566	Open in IMG/M
3300033289\|Ga0310914_10025658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4633	Open in IMG/M
3300033289\|Ga0310914_10471670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1136	Open in IMG/M
3300033290\|Ga0318519_10168201	Not Available	1235	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.74%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.26%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1000917834	3300005332	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYPNRDEQISWKLGAGGCSWQQTARFCAYLCQSRNLRLEIQEFPPCWLLDVDDTAGPDFKRKPAAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0066388_1009734551	3300005332	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQITWKLGPGGCSWYDTAKFCAYLCQSRNLRLEIMEFPPAWLIDADDVEGPTFKGKPQAAKLLRRLLAAGLSQYEPDPIRALA
Ga0066388_1026267362	3300005332	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDTAGPAFKRKPEAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0066905_1001311322	3300005713	Tropical Forest Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0066903_1052306122	3300005764	Tropical Forest Soil	MAELSKTDCDALKRCIKMARTYPNRAEQIDWKLKEGGCSWYDTAKFCAYLCQSKNLHLEIQEFPPCWLLDADDVEGPAFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKRAANQVAAE*
Ga0066903_1061951531	3300005764	Tropical Forest Soil	WWRSPRACASVHRAGSPTIPERRDRRRCRITNERSSKRMTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLKEGGCNWQDTAKFCAYLCQSKNLRLEIQEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLATGLSQYEPDPIHALAAAEKLQAAE*
Ga0066903_1088339671	3300005764	Tropical Forest Soil	MTKLSDIDRDALKRCIEMARTYPGRDEQITWKLGPGGCSWQDTAKFCAYLCQSRNLHLEMQEFPPCWLLDADDTAGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0066903_1091224111	3300005764	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYPNRDEQISWKLGVGGCSWQDTAKFCAYLCQSINLHLEIMEFPPAWLLDADDTAGPAFKRKPEAARLLRRLLAAGLSQYEPDPIRALEAA
Ga0126380_109499972	3300010043	Tropical Forest Soil	MAELSKTDCDALKRCIEMARTYPGRDEQICWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPRWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0126384_105920492	3300010046	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYPGRSEQIDWKLNEGRCSWQDTAKFCAYLCQSKNLRLEIMEFPPAWLIDADDVEGPAFKGKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0126384_112317771	3300010046	Tropical Forest Soil	MAELSKTDCDALKRCIEMERTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAN*
Ga0126370_102144002	3300010358	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYPARDEQISWKFGKGGCSWQDTAKFCAYLCQSKNLRLEIQEFPPRWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0126378_105584352	3300010361	Tropical Forest Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAGKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0126378_110878721	3300010361	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYSGRDEQITWKLGPGGCSWYDTAKFCAYLCQSKNLRLEIMEFPPAWLIDADDVEGPAFKGKPQAAKLLRR
Ga0126377_117063542	3300010362	Tropical Forest Soil	CIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAK*
Ga0126379_1000038017	3300010366	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYPNRDEQISWKLGVGGCSWQDTAKFCAYLCQSRNLHLEIMEFPPAWLLDADDTAGPAFKRKPEAARLLRRLLAAGLSQYEPDPIRALEAAEKLPVQAAE
Ga0126379_103426063	3300010366	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYPGRSEQISWKLGAGGCSWQDTAKFCAYLCQSRNLRLEIMEFPPAWLIDADDVEGPAFKGKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0126381_1019559862	3300010376	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0126383_106931332	3300010398	Tropical Forest Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAK*
Ga0124844_10146351	3300010868	Tropical Forest Soil	MTKLSDVDRDALKRCVEMARTYPGRDEQITWKLGPGGCSWYDTAKFCAYLCQSRNLRLEIMEFPPAWLIDADDVEGPTFKGKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0126369_130694131	3300012971	Tropical Forest Soil	MTKLSDVDRDALKRCIEMARTYPNRDEQISWKLGVGGCSWQDTAKFCAYLCQSKNLHLEIQEFPPCWLLDVDDTAGPAFKRKPEAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAA
Ga0126369_137227131	3300012971	Tropical Forest Soil	MTKLSDIDRDALKRCIEMARTYPGRDEQITWKLEPGGCSWYDTAKFCAYLCQSRNLKLAIYEFPPCWLRDAEDTKGPAFKGKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE*
Ga0182041_117606141	3300016294	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYE
Ga0182033_1000097817	3300016319	Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKLCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIR
Ga0182033_102841984	3300016319	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDP
Ga0182032_104699513	3300016357	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRA
Ga0182032_108269201	3300016357	Soil	LERAIAMARMYPNRDEQITWKLGPGQCTWEETARFCAYLCQSKNLRLEIMEFPPCWLLDTEDTEGPAFKRKVEAARLLKRLLDAGLSKYEPDPIRALAAAEKPLQAAE
Ga0182032_115698351	3300016357	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRA
Ga0182034_100391781	3300016371	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQ
Ga0182040_107105201	3300016387	Soil	CRITNERSLKRMTKLSKVDRDALERAIAMARMYPNRDEQITWKLGPGQCTWEETARFCAYLCQSKNLRLEIMEFPPCWLLDTEDTEGPAFKRKVEAARLLKRLLDAGLSKCEPDSIRALAAAEKPLQAAE
Ga0182040_113647692	3300016387	Soil	MTKLSDVDRDALKRCIEMARTYPNRDEQISWKLGAGGCSWQETARFCAYLCQAKNLQLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0182037_110147752	3300016404	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLS
Ga0182037_118528351	3300016404	Soil	IPERRDRRRCRITNERSSKRMTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLNEGGCSWQETARFCAYLCQSKNLRLEIMEFPPCWLLDADDTEGPSFKGKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0182038_100173864	3300016445	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYE
Ga0318516_100305713	3300031543	Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKFCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIRVLAAAEKPLQAAE
Ga0318534_103617671	3300031544	Soil	KLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKLCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIRVLAAAEKPLQAAE
Ga0318541_101016304	3300031545	Soil	YPGRDEQISWKLGKGGCSWQDTAKFCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIRVLAAAEKPLQAAE
Ga0318541_101703081	3300031545	Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318538_1000018716	3300031546	Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKLCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIRVLAAAEKPLQAAE
Ga0318538_104696271	3300031546	Soil	MTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAE
Ga0318571_102611572	3300031549	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318528_106464661	3300031561	Soil	MTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318573_100903852	3300031564	Soil	MTTQLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318515_104344761	3300031572	Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSKNLRLEIMEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIRVLAAAEKPLQAAE
Ga0318515_104508581	3300031572	Soil	MTKLSKVDRDALERAIAMARMYPNRDEQITWKLGPGQCTWEETARFCAYLCQSKNLRLEIMEFPPCWLLDTEDTEGPAFKRKVEAARLLKRLLDAGLSKYEPDPIRALAAAEKPLQAAE
Ga0310915_107013331	3300031573	Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLNEGGCSWQETARFCAYLCQSKNLRLEIMEFPPCWLLDADDTEGPSFKGKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0310915_112623331	3300031573	Soil	AGNPIIPERRDRRRCRITNERSSKRMTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318542_100348304	3300031668	Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKFCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIRALAAAEKPLQAAE
Ga0318561_104704171	3300031679	Soil	SVTTVRRAGCKYGRRRTETWWRSPRACVSVRRAGNPTIPERRDRRQCRITNERSLKRMTKLSKVDRDALERAIAMARMYPNRDEQITWKLGPGQCTWEETARFCAYLCQSKNLRLEIMEFPPCWLLDTEDTEGPAFKRKVEAARLLKRLLDAGLSKYEPDPIRALAAAEKPLQAAE
Ga0318574_100116783	3300031680	Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKLCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIRALAAAEKPLQAAE
Ga0318572_102981872	3300031681	Soil	TYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318560_101472612	3300031682	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQNTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0306917_101497811	3300031719	Soil	MTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAA
Ga0318500_106633241	3300031724	Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAG
Ga0318501_101130562	3300031736	Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKFCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLS
Ga0306918_107022972	3300031744	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAA
Ga0318509_102287692	3300031768	Soil	MMKLSKVDRDALERAIAMARMYPNRDEQITWKLGPGQCTWEETARFCAYLCQSKNLRLEIMEFPPCWLLDTEDTEGPAFKRKVEAARLLKRLLDAGLSKYEPDPIRALAAAEKPLQAAE
Ga0318546_105104931	3300031771	Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKLCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEP
Ga0318546_110230771	3300031771	Soil	PIIPERRDRRRCRITNERSSKRMTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318546_112972241	3300031771	Soil	ITNERSLKRMTKLSKVDRDALERAIAMARMYPNRDEQITWKLGPGQCTWEETARFCAYLCQSKNLRLEIMEFPPCWLLDTEDTEGPAFKRKVEAARLLKRLLDAGLSKYEPDPIRALAAAEKPLQAAE
Ga0318498_101546661	3300031778	Soil	MAELSKTDCDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQA
Ga0318498_104701242	3300031778	Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEP
Ga0318508_10815041	3300031780	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRL
Ga0318508_11077462	3300031780	Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKLCAYLCQSKNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAA
Ga0318529_104932831	3300031792	Soil	KLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318548_102326971	3300031793	Soil	MPRKAADSLVVSIPIIPERRDRRRCRITNERSSKRMTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318550_102436621	3300031797	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQA
Ga0318568_102038943	3300031819	Soil	IEMARTYPGRDEQISWKLGKGGCSWQDTAKFCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIRVLAAAEKPLQAAE
Ga0318567_108818902	3300031821	Soil	MAELSKTDCDALKRCIEMARTYPNRGEQIDWKIEYDGWQNTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAGE
Ga0318499_103043222	3300031832	Soil	PNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPQAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0310917_104705291	3300031833	Soil	MMKLSKVDRDALERAIAMARMYPNRDEQITWKLGPGQCTWEETARFCAYLCQSKNLRLEIMEFPPCWLLDTEDTEGPAFKRKVEAARLLKRLLDAGLSKYEPDSIRALAAAEKPLQAAE
Ga0318517_105403521	3300031835	Soil	KLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSKNLGLAICEFPPCWLLDIEDTEGPAFKGKPQAARLLKRLLAAGLSQYEPDPIRALEAVEKLQAAG
Ga0318527_101246831	3300031859	Soil	LKRCIEMARTYPNRGEQIDWKLNEGGCSWQETARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318495_104460921	3300031860	Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLNEGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0306919_100828151	3300031879	Soil	TNERSSKRMTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLNEGGCSWQETARFCAYLCQSKNLRLEIMEFPPCWLLDADDTEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0306919_102241632	3300031879	Soil	MTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPTRALAAAEKLQAAE
Ga0306919_105130892	3300031879	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDTAGPAFKRKPEAAKLLRRLLAAGLSQYEPDPIRTLAAAEKLQAAE
Ga0306925_100039841	3300031890	Soil	MTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLS
Ga0306925_101152561	3300031890	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAA
Ga0306925_102786373	3300031890	Soil	MTTQLSDVDRDALTRAIAMARTYPNRGEQVDWKIEYDGWLDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDTAGPAFKRKPEAAKLLRRLLAAGLSQYEPDPIRTLAAAEKLQAAE
Ga0306925_103209684	3300031890	Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSKNLRLEIMEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIRALAAAEKPLQAAE
Ga0318522_102668461	3300031894	Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318551_106486852	3300031896	Soil	MTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0306923_101944593	3300031910	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGL
Ga0306921_100050641	3300031912	Soil	MTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLR
Ga0306921_1001340412	3300031912	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQ
Ga0306921_105439402	3300031912	Soil	MTKLSKVDRDALERAIAMARMYPNRDEQITWKLGPGQCTWEETARFCAYLCQSKNLRLEIMEFPPCWLLDTEDTEGPAFKRKVEAARLLKRLLDAGLSKYEPDSIRALAAAEKPLQAAE
Ga0310913_100803814	3300031945	Soil	VDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0310913_100967634	3300031945	Soil	MTKLSDVDRDALKRCIEMARTYPNRDEQISWKLGAGGCSWQETARFCAYLCQAKNLQLEIQEFPPCWLLDADDVEGPAFKRKPEAARLLRRLLDAGLSQY
Ga0310913_103083071	3300031945	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLR
Ga0310910_100051041	3300031946	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAA
Ga0310909_1000121617	3300031947	Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKFCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAA
Ga0310909_101754661	3300031947	Soil	DVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0306926_103654012	3300031954	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0306922_100044321	3300032001	Soil	MTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALA
Ga0310911_103030991	3300032035	Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWYDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDTAGPAFKRKPEAAKLLRRLLAAGLSQYEPDPIRTLAAAEKLQAAE
Ga0318559_104051281	3300032039	Soil	RLSMAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318545_103016981	3300032042	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318532_101242361	3300032051	Soil	RTYRAARDEQISWKLGPGGCSWQETARFCAYLCQSKNLGLAICEFPPCWLLDIEDTEGPAFKGKPQAARLLKRLLAAGLSQYEPDPIRALEAVEKLQAAG
Ga0318533_101221001	3300032059	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAE
Ga0318553_101468583	3300032068	Soil	KTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQNTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0318553_105663031	3300032068	Soil	MTKLSDVDRDALKRCIEMARTYPGRDEQISWKLGKGGCSWQDTAKLCAYLCQSKNLRLEIQEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYE
Ga0306924_116670592	3300032076	Soil	MTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSKNLRLEIMEFPPCWLLDADDTAGPAFKRKPEAARLLKRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0306924_123134962	3300032076	Soil	MMKLSDVDRDALKRCIEMARTYPNRDEQISWKLGAGGCSWQETARFCAYLCQAKNLQLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQ
Ga0318540_105762341	3300032094	Soil	RRCRITNERSSKRMTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0306920_1036433001	3300032261	Soil	RSPRACASVRRAGNPIIPERRDRRRCRITNERSSKRMTKLSDVDRDALKRCIEMARTYPNRSEQIDWKLGKGGCSWQETARFCAYLCQSRNLQLEIMEFPPCWLLDAEDTEGPSFKRKPEAARLLRRLLAAGLSQYEPDPIRALAAAEKLQAAE
Ga0310914_100256581	3300033289	Soil	MTKLSDVDRDALKRCIEMARTYSGRDEQISWKLGKGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEK
Ga0310914_104716702	3300033289	Soil	MTKLSDVDRDALKRCIEMARTYPNRGEQIDWKLNEGGCSWQDTAKFCAYLCQSRNLRLEIQEFPPCWLLDVDDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRALAAAEK
Ga0318519_101682013	3300033290	Soil	MAELSKTDCDALKRCIEMARTYPNRSEQIDWKIEYDGWQATARFCAYLCQSRNLRLEIQEFPPCWLLDADDVEGPAFKRKPQAAKLLRRLLAAGLSQYEPDPIRAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088049

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences