Metagenome / Metatranscriptome Family F087817

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087817
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	81 residues
Representative Sequence	MTEIPGRESALSRDLARVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARQTAAEADSAIGGRADEAEQ
Number of Associated Samples	91
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	61.82 %
% of genes near scaffold ends (potentially truncated)	46.36 %
% of genes from short scaffolds (< 2000 bps)	96.36 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.909 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.091 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.68% β-sheet: 18.18% Coil/Unstructured: 51.14%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13193	AMP-binding_C	4.55
PF13683	rve_3	2.73
PF01458	SUFBD	1.82
PF00011	HSP20	1.82
PF09339	HTH_IclR	0.91
PF00106	adh_short	0.91
PF00487	FA_desaturase	0.91
PF13460	NAD_binding_10	0.91
PF03861	ANTAR	0.91
PF07167	PhaC_N	0.91
PF13546	DDE_5	0.91
PF02566	OsmC	0.91
PF02909	TetR_C_1	0.91
PF12802	MarR_2	0.91
PF08281	Sigma70_r4_2	0.91
PF16859	TetR_C_11	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.82
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	1.82
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.91
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.91
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.91
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.91
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.91
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	0.91
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
All Organisms	root	All Organisms	29.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
cellular organisms	root	All Organisms → cellular organisms	29.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.73 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.82 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.82 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	2.73 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.82 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	2.73 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.82 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	2.73 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.82 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.91 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	2.73 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.82 %
Micromonospora sp. ALFpr18c	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. ALFpr18c	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_151478	Not Available	588	Open in IMG/M
3300004479\|Ga0062595_100974722	Not Available	725	Open in IMG/M
3300005162\|Ga0066814_10095424	Not Available	551	Open in IMG/M
3300005338\|Ga0068868_102057289	Not Available	543	Open in IMG/M
3300005355\|Ga0070671_101338765	Not Available	632	Open in IMG/M
3300005434\|Ga0070709_10116713	Not Available	1802	Open in IMG/M
3300005434\|Ga0070709_10410018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1013	Open in IMG/M
3300005435\|Ga0070714_100017542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5801	Open in IMG/M
3300005435\|Ga0070714_100893226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	862	Open in IMG/M
3300005436\|Ga0070713_100462722	Not Available	1193	Open in IMG/M
3300005436\|Ga0070713_100911727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	845	Open in IMG/M
3300005445\|Ga0070708_100440757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1229	Open in IMG/M
3300005549\|Ga0070704_101220422	Not Available	686	Open in IMG/M
3300005563\|Ga0068855_100643050	Not Available	1140	Open in IMG/M
3300005610\|Ga0070763_10850181	Not Available	541	Open in IMG/M
3300005614\|Ga0068856_101005877	Not Available	852	Open in IMG/M
3300006049\|Ga0075417_10309813	Not Available	767	Open in IMG/M
3300006052\|Ga0075029_100854452	Not Available	622	Open in IMG/M
3300006059\|Ga0075017_100979797	Not Available	658	Open in IMG/M
3300006102\|Ga0075015_100495772	Not Available	703	Open in IMG/M
3300006163\|Ga0070715_10257061	Not Available	916	Open in IMG/M
3300006175\|Ga0070712_101375977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300006354\|Ga0075021_10451188	Not Available	811	Open in IMG/M
3300006573\|Ga0074055_10015688	Not Available	591	Open in IMG/M
3300006574\|Ga0074056_11804173	Not Available	714	Open in IMG/M
3300006575\|Ga0074053_12009425	Not Available	542	Open in IMG/M
3300006577\|Ga0074050_12015194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300006580\|Ga0074049_13081298	Not Available	1189	Open in IMG/M
3300006581\|Ga0074048_13458723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	909	Open in IMG/M
3300006581\|Ga0074048_13508282	Not Available	1313	Open in IMG/M
3300006852\|Ga0075433_10162336	Not Available	1989	Open in IMG/M
3300006953\|Ga0074063_13995647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1142	Open in IMG/M
3300007076\|Ga0075435_100376755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1219	Open in IMG/M
3300009012\|Ga0066710_104006922	Not Available	551	Open in IMG/M
3300009088\|Ga0099830_10423106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1079	Open in IMG/M
3300009137\|Ga0066709_102287398	Not Available	742	Open in IMG/M
3300010154\|Ga0127503_10268603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1497	Open in IMG/M
3300010154\|Ga0127503_10582334	Not Available	706	Open in IMG/M
3300010396\|Ga0134126_12003307	Not Available	633	Open in IMG/M
3300011106\|Ga0151489_1161422	Not Available	653	Open in IMG/M
3300011106\|Ga0151489_1315089	Not Available	547	Open in IMG/M
3300011107\|Ga0151490_1181748	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300011107\|Ga0151490_1571669	Not Available	582	Open in IMG/M
3300011271\|Ga0137393_11075168	Not Available	684	Open in IMG/M
3300012198\|Ga0137364_10349999	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300012198\|Ga0137364_10508124	Not Available	906	Open in IMG/M
3300012198\|Ga0137364_11011494	Not Available	628	Open in IMG/M
3300012199\|Ga0137383_10492084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300012200\|Ga0137382_10897842	Not Available	638	Open in IMG/M
3300012200\|Ga0137382_11310135	Not Available	511	Open in IMG/M
3300012201\|Ga0137365_10172520	Not Available	1621	Open in IMG/M
3300012201\|Ga0137365_10210370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1452	Open in IMG/M
3300012208\|Ga0137376_10688280	Not Available	882	Open in IMG/M
3300012208\|Ga0137376_11140696	Not Available	666	Open in IMG/M
3300012211\|Ga0137377_10654342	Not Available	986	Open in IMG/M
3300012285\|Ga0137370_10452210	Not Available	782	Open in IMG/M
3300012350\|Ga0137372_11068965	Not Available	557	Open in IMG/M
3300012356\|Ga0137371_10266854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1336	Open in IMG/M
3300012356\|Ga0137371_11042636	Not Available	618	Open in IMG/M
3300012356\|Ga0137371_11369167	Not Available	520	Open in IMG/M
3300012896\|Ga0157303_10068452	Not Available	781	Open in IMG/M
3300012957\|Ga0164303_10452526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	808	Open in IMG/M
3300012960\|Ga0164301_11716300	Not Available	525	Open in IMG/M
3300012961\|Ga0164302_11537955	Not Available	550	Open in IMG/M
3300012977\|Ga0134087_10633635	Not Available	558	Open in IMG/M
3300012987\|Ga0164307_11453081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300012988\|Ga0164306_11123210	Not Available	655	Open in IMG/M
3300017657\|Ga0134074_1268474	Not Available	617	Open in IMG/M
3300018081\|Ga0184625_10164821	Not Available	1158	Open in IMG/M
3300018482\|Ga0066669_11114300	Not Available	712	Open in IMG/M
3300018482\|Ga0066669_11348657	Not Available	646	Open in IMG/M
3300019887\|Ga0193729_1137251	Not Available	895	Open in IMG/M
3300019890\|Ga0193728_1257650	Not Available	693	Open in IMG/M
3300020581\|Ga0210399_11118216	Not Available	630	Open in IMG/M
3300021178\|Ga0210408_10825535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300021407\|Ga0210383_10033697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4281	Open in IMG/M
3300021420\|Ga0210394_10519459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1048	Open in IMG/M
3300021478\|Ga0210402_10309585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1463	Open in IMG/M
3300021478\|Ga0210402_11587087	Not Available	581	Open in IMG/M
3300021478\|Ga0210402_11886450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. ALFpr18c	523	Open in IMG/M
3300025905\|Ga0207685_10414047	Not Available	693	Open in IMG/M
3300025910\|Ga0207684_10634064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	911	Open in IMG/M
3300025910\|Ga0207684_10687356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	870	Open in IMG/M
3300025915\|Ga0207693_10034184	All Organisms → cellular organisms → Bacteria	4010	Open in IMG/M
3300025928\|Ga0207700_10113664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	2183	Open in IMG/M
3300025928\|Ga0207700_11409878	Not Available	619	Open in IMG/M
3300026475\|Ga0257147_1012758	Not Available	1128	Open in IMG/M
3300027862\|Ga0209701_10501781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300027875\|Ga0209283_10521776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	762	Open in IMG/M
3300027894\|Ga0209068_10197128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1106	Open in IMG/M
3300027898\|Ga0209067_10451907	Not Available	725	Open in IMG/M
3300027909\|Ga0209382_10733526	Not Available	1059	Open in IMG/M
3300028715\|Ga0307313_10034251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1446	Open in IMG/M
3300028718\|Ga0307307_10029933	Not Available	1542	Open in IMG/M
3300028768\|Ga0307280_10136732	Not Available	839	Open in IMG/M
3300028784\|Ga0307282_10655600	Not Available	509	Open in IMG/M
3300028819\|Ga0307296_10559326	Not Available	626	Open in IMG/M
3300028828\|Ga0307312_11101846	Not Available	525	Open in IMG/M
3300028885\|Ga0307304_10279714	Not Available	733	Open in IMG/M
3300031090\|Ga0265760_10386321	Not Available	504	Open in IMG/M
3300031114\|Ga0308187_10270778	Not Available	625	Open in IMG/M
3300031226\|Ga0307497_10619202	Not Available	550	Open in IMG/M
3300031231\|Ga0170824_108860476	Not Available	1001	Open in IMG/M
3300031421\|Ga0308194_10268775	Not Available	579	Open in IMG/M
3300031446\|Ga0170820_10637647	Not Available	563	Open in IMG/M
3300031474\|Ga0170818_106977828	Not Available	976	Open in IMG/M
3300031708\|Ga0310686_106055649	Not Available	1061	Open in IMG/M
3300031716\|Ga0310813_11961353	Not Available	552	Open in IMG/M
3300032160\|Ga0311301_10448791	Not Available	1944	Open in IMG/M
3300032205\|Ga0307472_102427362	Not Available	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.73%
Host-Associated	Host-Associated	7.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.55%
Aquatic	Environmental → Aquatic	8.18%
Plants	Host-Associated → Plants	7.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.55%
Sediment	Environmental → Aquatic → Sediment	6.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.73%
Freshwater	Environmental → Aquatic → Freshwater	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.09%
Loam	Environmental → Terrestrial → Soil → Loam	15.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.73%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.27%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.73%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02490920	2199352025	Soil	MAEIPDRESALSRDLAGVNCALVKIVDAEDRYYVLIGEPELYRDGFRLETTDVLTLSQAEDWGRQEIARRTAAEADSAIGGRADEAEHE
Ga0062595_1009747222	3300004479	Soil	DLARVNCALVKIVDADRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEVARQTAAQADSAIGSKADEAQQ*
Ga0066814_100954241	3300005162	Soil	TLAVHGEKTPAQPGVRNERNAMSEIPGRESALSRDLARVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRREIARQTAAEADSANGGKADEAQQ*
Ga0068868_1020572892	3300005338	Miscanthus Rhizosphere	MTEIPNRESALSRDLAGVNCALVKIVDADDRYYVLIGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIAR
Ga0070671_1013387651	3300005355	Switchgrass Rhizosphere	MAEIPARESALSRDLAGVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRAAAEADSAIGGRADEAEQ*
Ga0070709_101167133	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTEIPDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEHWCRQEIARRTAEAEQ*
Ga0070709_104100182	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTEIPARESALSRDLARVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAISGKADEAQQ*
Ga0070714_1000175421	3300005435	Agricultural Soil	NCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRAAAEADSAIGGRADEAEQ*
Ga0070714_1008932261	3300005435	Agricultural Soil	MAEIPARESALSRDLAGVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAISGKADEAQQ*
Ga0070713_1004627221	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSEIPGRESALSRDLARVNCALVKIVDADDRYYVLVGEPELYRDGFQLETTNVLTLSQAEDWCRQEIARQTAAEADSAIGGRADETEQ*
Ga0070713_1009117271	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAISGKADEAQQ*
Ga0070708_1004407574	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DTTEIPDRESTRSRDLARVNCALAKIVDADDRYCVLVGEPGRYRDGFRLETTDVFTLSQAEDWCRQEIARQTAAGADSAIGGRADEAER*
Ga0070704_1012204221	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RDLAGVNCALVKIVDADDRYYVLIGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARRAAAEADSAIGGRADEAEQ*
Ga0068855_1006430502	3300005563	Corn Rhizosphere	MAEIPARESALSRDLAGVNCALVKIVDADDRYYVLIGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARRAAAEADSAIGGRADEAEQ*
Ga0070763_108501811	3300005610	Soil	MTEIPDRESTLSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARWTATEADSAIGGRAD
Ga0068856_1010058771	3300005614	Corn Rhizosphere	MTEIPDRESALSRDLAGVNCALVKIVDADDRYYVLIGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARRAAAEADSAIGGRADEAEQ*
Ga0075417_103098131	3300006049	Populus Rhizosphere	MTEIPDRESALSRDLAGVNCALVKIVDADDRYYVFIGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARSTAEAEQ*
Ga0075029_1008544521	3300006052	Watersheds	MTEIPGRESALSRDLARVNCALVKIVDADDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGKADEAEQ*
Ga0075017_1009797972	3300006059	Watersheds	MTEIPGRESALSRDLARVNCALVKIVDADDRYYVLIGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARQTAAEADSAIGGRADEAEQ*
Ga0075015_1004957721	3300006102	Watersheds	MTEIPDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGKADEAEQ*
Ga0070715_102570613	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	KIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRAAAEADSAIGGRADEAEQ*
Ga0070712_1013759771	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRREIARQTAAEADSTIGGKADEASSE*
Ga0075021_104511882	3300006354	Watersheds	MTEIPDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAGADSAIGGKADEAEQ*
Ga0074055_100156881	3300006573	Soil	RESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGKADEAEQ*
Ga0074056_118041733	3300006574	Soil	MTEIPARESKLSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGKADEAEQ*
Ga0074053_120094252	3300006575	Soil	RESALSRDLAGVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRAAAEADSAIGGRADEAEQ*
Ga0074050_120151941	3300006577	Soil	ESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEQ*
Ga0074049_130812981	3300006580	Soil	MAEIPDRESALSRDLAGVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRAAAEADSAIGGRADEAEQ*
Ga0074048_134587233	3300006581	Soil	MTEIPGRESALSRDLARVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAI
Ga0074048_135082822	3300006581	Soil	MAEIPDRESALSRDLAGVNCALVKIVDAEDRYYVLVGEPELYGDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEQ*
Ga0075433_101623362	3300006852	Populus Rhizosphere	MTEIPGRESALSRDLARVNCALVKIVDADRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARQTAAQADSAIGSKADEAQQ*
Ga0074063_139956473	3300006953	Soil	MAEIPGRESALSRDLAGLNCALVKIVDAEDRYYVLVGEPELYGDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEHE*
Ga0075435_1003767553	3300007076	Populus Rhizosphere	RESALSRDLAGVNCALVKIVDADDRYYVFIGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARSTAEAEQ*
Ga0066710_1040069221	3300009012	Grasslands Soil	RNDMTEIPNRESALSRDLAGVNCALVKIVDADDRYYVLIGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARSTAEAEQ
Ga0099830_104231061	3300009088	Vadose Zone Soil	MTEIPDRESTLSRDLARVNCALVKIVDADDRYCVLVGEPELYRDGFRLETTDVFTLSQAEDWCRQEIARQTAAEADSAIGGRADEAEQ*
Ga0066709_1022873982	3300009137	Grasslands Soil	MSEIPGRESALSRDLAGVNCALVKIVAADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSATGRADEAEQ*
Ga0127503_102686032	3300010154	Soil	MAEIPDRESALSRDLAGVNCALVKIVDAEDRYYVLVGEPELYGDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEHE*
Ga0127503_105823342	3300010154	Soil	RNERNDMTEIPGRESVLSRDLARVNCALVKIVDADDRYYVLVSEPELYRDGFRLETTDVLTLSQAEDWCRQEIARQTAAEADSAIGGKADEAQQ*
Ga0134126_120033073	3300010396	Terrestrial Soil	MTEIPDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEI
Ga0151489_11614222	3300011106	Soil	MAEIPDRESTLSRDLAGVNCALVKVVDAEDRYYVLVGEPELYRDGFRLATTDVFTLSQAEDWCGQEIARQTAAEADSAIGGRADEAEQ*
Ga0151489_13150891	3300011106	Soil	VNCALIKIVDAEDRYYVLVGEPELYGDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGKADEAEQ*
Ga0151490_11817482	3300011107	Soil	MTEIPGRESALSRDLARVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTNVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEHE*
Ga0151490_15716692	3300011107	Soil	MAEIPARESALSRDLAGVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARLTAAEADSAIGGRADEAEQ*
Ga0137393_110751682	3300011271	Vadose Zone Soil	VNCALVKIVDADDRYCVLVGEPELYRDGFRLETTDVFTLSQAEDWCRQEIARQTAAEADSAIGGRADEAEQ*
Ga0137364_103499991	3300012198	Vadose Zone Soil	CALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARQTAAGADSAAGGRADEAEQ*
Ga0137364_105081242	3300012198	Vadose Zone Soil	MTEIPGRESTLSRDLARVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSATGRADEAEQ*
Ga0137364_110114942	3300012198	Vadose Zone Soil	MTEIPDRESKLSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEHWCRQEIARRTAAEADSAIGGGADEAGQ*
Ga0137383_104920841	3300012199	Vadose Zone Soil	DDRYYVLVGEPELYRDGFRLETTDVLTLSQAEGWCRQEIARRTAAEADSATGRADEAEQ*
Ga0137382_108978421	3300012200	Vadose Zone Soil	MTEIPERESTLSRDLAGVNCALVKIVDTDDRYYVLVGEPELYRDGFRLETTDVLTLSQAEGWCRQEIARRTAAEADSATGRADEAEQ*
Ga0137382_113101351	3300012200	Vadose Zone Soil	MTEIPGRESTLSRDLARVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEHWCRQEIARRSAAEADSAIGGGADEAGQ*
Ga0137365_101725203	3300012201	Vadose Zone Soil	MTEIPGRESALSRDLARVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTNVLTLSQAEDWCRQEIAGRTAAEADSAAGGRADEAEQ*
Ga0137365_102103701	3300012201	Vadose Zone Soil	MTEIHDRESALSRDLAGLNCALVKIVDADDRYYVLVGEPELYRDGFRLETSGVLTLSQAEDWCRQEIARSTAAEAEQ*
Ga0137376_106882802	3300012208	Vadose Zone Soil	MTEIPGRESTLSRDLARVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARQTAAGADSAAGGRADEAGQ*
Ga0137376_111406961	3300012208	Vadose Zone Soil	ADDRYYVLVGEPELYRDGFRLETTEVLTLSQAEDWCRQEIAGRTAAEADSAIGGRADEAEQ*
Ga0137377_106543423	3300012211	Vadose Zone Soil	DRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGKADEAEQ*
Ga0137370_104522101	3300012285	Vadose Zone Soil	MTEIPERESTLSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEA
Ga0137372_110689651	3300012350	Vadose Zone Soil	MTEIHDRESALSRDLAGLNCALVKIVDADDRYYVLVGEPELYRDGFRLETSDVLTLSQAEDWCRQEIARSTAAEAEQ*
Ga0137371_102668541	3300012356	Vadose Zone Soil	DRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETSDVLTLSQAEDWCRQEIARSTAAEAEQ*
Ga0137371_110426361	3300012356	Vadose Zone Soil	RESALSRDLARVNCALVKIVDAEDRYYVLIGEPELYRDGFRLETTDVLTLSQAEDWCRQEIAGRTAAEADSAAGGRADEAEQ*
Ga0137371_113691671	3300012356	Vadose Zone Soil	CALVKIVDADDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGKADEAEQ*
Ga0157303_100684521	3300012896	Soil	LSRDLAGVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRAAAEADSAIGGRADEAEQ*
Ga0164303_104525262	3300012957	Soil	MAEIPARESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRAAAEADSAIGGRADEAEQ*
Ga0164301_117163001	3300012960	Soil	MTEIPGRESALSRDLARVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARQTAAEADSAIGGRADEAEQ*
Ga0164302_115379551	3300012961	Soil	MAEIPARESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTNVLTLSQAEDWCRQEIARQTAAEADSAIGGRADETEP*
Ga0134087_106336352	3300012977	Grasslands Soil	MTEIPNRESALSRDLAGVNCALVKIVDADDRYYVLIGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIA
Ga0164307_114530811	3300012987	Soil	MAEIPGRESALSRDLAGLNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAISGKADEAQQ*
Ga0164306_111232102	3300012988	Soil	ALSRDLAGLNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAGADSAIGGRADEAER*
Ga0134074_12684741	3300017657	Grasslands Soil	MSEIPGRESALSRDLAGVNCALVKIVAADDRYYVLVGEPELYRDGFRLETTEVLTLSQAEDWCRQEIAGRTAAEADSAIGGRADEAEQ
Ga0184625_101648213	3300018081	Groundwater Sediment	MTEIHDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETSDVLTLSQAEDWCRQEIARSTAEAEQ
Ga0066669_111143002	3300018482	Grasslands Soil	MSEIPARESTLSRDLAAVNCTLVKIVDADDRYYVLIGEPELYRDGFRLQTSDVLTLSQAEDWCRREIARQAAAEADSAIGGKADEA
Ga0066669_113486571	3300018482	Grasslands Soil	RESTLSRDLAGVKCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSATGRADEAGQ
Ga0193729_11372512	3300019887	Soil	MAEFPDRESALSRDLAGVNCALVKIVDAEDRYYVLVGEPELYGDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEQ
Ga0193728_12576501	3300019890	Soil	PDRESALSRDLAGVNCALVKIVDAEDRYYVLVGEPELYGDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEQ
Ga0210399_111182161	3300020581	Soil	MTEIPDRESKLSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIAR
Ga0210408_108255352	3300021178	Soil	RDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTTAEADSAIGGRADEAEQ
Ga0210383_100336975	3300021407	Soil	MTEIPDRESTLSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARWTATEADSAIGGRADDAEQ
Ga0210394_105194592	3300021420	Soil	MAEIPGRESALSRDLAGLNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEHE
Ga0210402_103095853	3300021478	Soil	MTEIPGRESALSRDLARVNCALVKIVDADDRYYVLVSEPELYRDGFRLETTDVLTLSQAEDWCRQEIARQTAAEADSAISGKADEAQQ
Ga0210402_115870871	3300021478	Soil	MTEIPDRESKLSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEI
Ga0210402_118864501	3300021478	Soil	RESALSRDLAGLNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEHE
Ga0207685_104140472	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTEIPDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEHWCRQEIARRTAEAE
Ga0207684_106340641	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VNRALARIVDADDRYCVLVGEPGLYRDGFRLETTDVFTLSQAEDWCRQEIARQTAAGADSAIGGRADEAER
Ga0207684_106873561	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGKADEAEQ
Ga0207693_100341845	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEHWCRQEIARRTAEAEQ
Ga0207700_101136642	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTEIPGRESALSRDLARVNCALVKIVDAEDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAISGKADEAQQ
Ga0207700_114098781	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TLSRDLARVNCALVKIVDADDRYYVLVGEPELYRDGFQLETTNVLTLSQAEDWCRQEIARQTAAEADSAIGGRADETEQ
Ga0257147_10127581	3300026475	Soil	MSEIPGRESALSRELARVNCALVKIVDADDRYYVLVGEPELYGDGFRLETTDVLSLSQAEDWCRQEIARRTAAEADSAIGGRADEAEQ
Ga0209701_105017812	3300027862	Vadose Zone Soil	MTEIPDRESTLSRDLARVNCALVKIVDADDRYCVLVGEPELYRDGFRLETTDVFTLSQAEDWCRQEIARQTAA
Ga0209283_105217762	3300027875	Vadose Zone Soil	MTEIPDRESTLSRDLARVNCALVKIVDADDRYCVLVGEPELYRDGFRLETTDVFTLSQAEDWCRQEIARQTAAEADSAIGGRADEAEQ
Ga0209068_101971281	3300027894	Watersheds	RNDMTEIPDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAGADSAIGGKADEAGQ
Ga0209067_104519071	3300027898	Watersheds	MTEIPGRESTLSRDLARVNCALVKIVDAEDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGIADEAEQ
Ga0209382_107335261	3300027909	Populus Rhizosphere	MTEIPDRESALSRDLAGVNCALVKIVDADDRYYVFIGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARSTAEAEQ
Ga0307313_100342513	3300028715	Soil	MTEIHDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETSGVLTLSQAEDWCRQEIARSTAAEAEQ
Ga0307307_100299333	3300028718	Soil	MTEIHDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETSDVLTLSQAEDWCRQEIARSTAAEAEQ
Ga0307280_101367321	3300028768	Soil	MTEIPDRESTLSRDLAGVNCALVKVVDAEDRYYVLVGEPELYRDGFRLETSDVLTLSQAEDWCRQEIARSTAAEAEQ
Ga0307282_106556001	3300028784	Soil	RRNERNDMTEIHDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYGDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEQ
Ga0307296_105593262	3300028819	Soil	MAEIPDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYGDGFRLETTDVLTLSQAEDWCRQEIARRTAAEADSAIGGRADEAEQ
Ga0307312_111018461	3300028828	Soil	DAEDRYYVLVGEPELYQDGFRLETTNVLTLSQAEDWYRREIARSTAAEADSATGGKADEAEQ
Ga0307304_102797141	3300028885	Soil	MTEIHDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARSTAAEAEQ
Ga0265760_103863211	3300031090	Soil	VKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARQAAAGADSAIGGKADEAEQ
Ga0308187_102707782	3300031114	Soil	MTEIHDRESALSRDLAGVNCALVKIVDADRYYVLIGEPELYRDGFRLETTDVLTLSQAEDWCRQEVARETANDH
Ga0307497_106192021	3300031226	Soil	RDLARVNCALVKIVDAGDRYCVLVGEPELYRDGFRLETTDVLSLSQAEDWCRQEIARRTAAEADSAIGGRADEAEQ
Ga0170824_1088604762	3300031231	Forest Soil	TGMPDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGKADEAEQ
Ga0308194_102687751	3300031421	Soil	EIHDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETSDVLTLSQAEDWCRQEIARSTAAEAEQ
Ga0170820_106376471	3300031446	Forest Soil	LALSRDLARVNCALVKIVDAEDRYYVLIGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARQTAAGADSAAGGRADEAEQ
Ga0170818_1069778282	3300031474	Forest Soil	ALSRDLAGVNCALVKIVDAEDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGKADEAEQ
Ga0310686_1060556491	3300031708	Soil	MTEIPDRESALSRDLAEVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTDVLTLSQAEDWCRQEIARSAAAEADSAIGGRADEAGQ
Ga0310813_119613531	3300031716	Soil	MAEIPARESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTEVLTLSQAEDWCRQETARQTAAEADSAAGGRADEAEQ
Ga0311301_104487913	3300032160	Peatlands Soil	MTEIHDRESALSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLQTSDVLTLSQAEDWCRQEIARQAAAEADSAIGGKADEAEQ
Ga0307472_1024273622	3300032205	Hardwood Forest Soil	MTEIPDRESTLSRDLAGVNCALVKIVDADDRYYVLVGEPELYRDGFRLETTNVLTLSQAEDWCRQEIARSTAAEADSAIGGRADEAEHE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087817

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences