NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F087797

Metagenome Family F087797

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087797
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 49 residues
Representative Sequence VTSEKTSTTSIDDPDAIAVTIREAAERNTKALRERPVPIAVEPPTVFRP
Number of Associated Samples 95
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.91 %
% of genes near scaffold ends (potentially truncated) 14.55 %
% of genes from short scaffolds (< 2000 bps) 81.82 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (85.455 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(17.273 % of family members)
Environment Ontology (ENVO) Unclassified
(25.455 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.636 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.27%    β-sheet: 0.00%    Coil/Unstructured: 72.73%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF01425Amidase 57.27
PF07726AAA_3 8.18
PF04055Radical_SAM 0.91
PF03745DUF309 0.91
PF00561Abhydrolase_1 0.91
PF01656CbiA 0.91
PF01106NifU 0.91
PF00296Bac_luciferase 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 57.27
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 0.91
COG1547Predicted metal-dependent hydrolaseFunction unknown [S] 0.91
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.91

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.45 %
UnclassifiedrootN/A14.55 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908032|Perma_A_C_ConsensusfromContig244729Not Available665Open in IMG/M
3300000880|AL20A1W_1018756All Organisms → cellular organisms → Bacteria1494Open in IMG/M
3300000880|AL20A1W_1215587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1210Open in IMG/M
3300000880|AL20A1W_1378995All Organisms → cellular organisms → Bacteria1390Open in IMG/M
3300000887|AL16A1W_10023686All Organisms → cellular organisms → Bacteria8029Open in IMG/M
3300001333|A21PFW6_1080031All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1651Open in IMG/M
3300001536|A1565W1_10806559All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300001538|A10PFW1_11410545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1253Open in IMG/M
3300001538|A10PFW1_12409253All Organisms → cellular organisms → Bacteria1446Open in IMG/M
3300002906|JGI25614J43888_10107639All Organisms → cellular organisms → Bacteria → Terrabacteria group728Open in IMG/M
3300002917|JGI25616J43925_10003346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi6726Open in IMG/M
3300004156|Ga0062589_100426586All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300004643|Ga0062591_100984854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium800Open in IMG/M
3300005175|Ga0066673_10049501All Organisms → cellular organisms → Bacteria2112Open in IMG/M
3300005181|Ga0066678_10750455All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300005290|Ga0065712_10444455All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300005434|Ga0070709_10233675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1317Open in IMG/M
3300005445|Ga0070708_100021533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus5452Open in IMG/M
3300005445|Ga0070708_100147098All Organisms → cellular organisms → Bacteria2189Open in IMG/M
3300005451|Ga0066681_10250183All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300005454|Ga0066687_10069322All Organisms → cellular organisms → Bacteria1702Open in IMG/M
3300005467|Ga0070706_100213441All Organisms → cellular organisms → Bacteria1802Open in IMG/M
3300005468|Ga0070707_100201843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus1938Open in IMG/M
3300005468|Ga0070707_100752819All Organisms → cellular organisms → Bacteria → Terrabacteria group938Open in IMG/M
3300005471|Ga0070698_100001990All Organisms → cellular organisms → Bacteria22675Open in IMG/M
3300005471|Ga0070698_100016517All Organisms → cellular organisms → Bacteria7788Open in IMG/M
3300005471|Ga0070698_101136558All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300005518|Ga0070699_100020947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5638Open in IMG/M
3300005518|Ga0070699_100791467All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium868Open in IMG/M
3300005537|Ga0070730_10725207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium629Open in IMG/M
3300005539|Ga0068853_100940696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium831Open in IMG/M
3300005549|Ga0070704_100620366All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300005552|Ga0066701_10587705All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300005552|Ga0066701_10818752All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300005561|Ga0066699_10027585All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3233Open in IMG/M
3300005563|Ga0068855_100499725All Organisms → cellular organisms → Bacteria1322Open in IMG/M
3300005568|Ga0066703_10505001All Organisms → cellular organisms → Bacteria → Terrabacteria group717Open in IMG/M
3300005569|Ga0066705_10176397All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300005598|Ga0066706_10349518All Organisms → cellular organisms → Bacteria1172Open in IMG/M
3300006032|Ga0066696_10152111All Organisms → cellular organisms → Bacteria1443Open in IMG/M
3300006046|Ga0066652_100741959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium936Open in IMG/M
3300006163|Ga0070715_10647157All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300006796|Ga0066665_10822980All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300006796|Ga0066665_10826082All Organisms → cellular organisms → Bacteria → Terrabacteria group727Open in IMG/M
3300006806|Ga0079220_12100341All Organisms → cellular organisms → Bacteria → Terrabacteria group506Open in IMG/M
3300006854|Ga0075425_101451406All Organisms → cellular organisms → Bacteria → Terrabacteria group775Open in IMG/M
3300006903|Ga0075426_10127150All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300007821|Ga0104323_126094All Organisms → cellular organisms → Bacteria2076Open in IMG/M
3300007982|Ga0102924_1083590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium1673Open in IMG/M
3300009012|Ga0066710_100748249All Organisms → cellular organisms → Bacteria1494Open in IMG/M
3300009089|Ga0099828_10541923All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300009137|Ga0066709_101695222All Organisms → cellular organisms → Bacteria → Terrabacteria group897Open in IMG/M
3300010322|Ga0134084_10393306Not Available539Open in IMG/M
3300010373|Ga0134128_10249578All Organisms → cellular organisms → Bacteria1991Open in IMG/M
3300010401|Ga0134121_10575685All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300011991|Ga0120153_1051821All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300011994|Ga0120157_1011383All Organisms → cellular organisms → Bacteria2316Open in IMG/M
3300011994|Ga0120157_1038471All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300011999|Ga0120148_1073136All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium674Open in IMG/M
3300012004|Ga0120134_1011365All Organisms → cellular organisms → Bacteria1359Open in IMG/M
3300012019|Ga0120139_1050974All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300012208|Ga0137376_10244944All Organisms → cellular organisms → Bacteria1554Open in IMG/M
3300012209|Ga0137379_11238524All Organisms → cellular organisms → Bacteria → Terrabacteria group653Open in IMG/M
3300012210|Ga0137378_11280032Not Available650Open in IMG/M
3300012211|Ga0137377_11614458All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300012350|Ga0137372_10866806All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300012356|Ga0137371_11148205All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300012360|Ga0137375_10977403Not Available667Open in IMG/M
3300012363|Ga0137390_10234171All Organisms → cellular organisms → Bacteria1822Open in IMG/M
3300012532|Ga0137373_10486916All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300012923|Ga0137359_10466525Not Available1116Open in IMG/M
3300012982|Ga0168317_1069682All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300013307|Ga0157372_12871258Not Available552Open in IMG/M
3300013501|Ga0120154_1034520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium1249Open in IMG/M
3300013831|Ga0120126_1047520Not Available524Open in IMG/M
3300014052|Ga0120109_1023125All Organisms → cellular organisms → Bacteria1389Open in IMG/M
3300014054|Ga0120135_1006205All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300015086|Ga0167655_1003953All Organisms → cellular organisms → Bacteria3468Open in IMG/M
3300015086|Ga0167655_1037852Not Available762Open in IMG/M
3300015161|Ga0167623_1045617All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300015162|Ga0167653_1000110All Organisms → cellular organisms → Bacteria29158Open in IMG/M
3300015162|Ga0167653_1023613All Organisms → cellular organisms → Bacteria → Acidobacteria1173Open in IMG/M
3300015195|Ga0167658_1002199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi7852Open in IMG/M
3300015199|Ga0167647_1113204All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300018468|Ga0066662_12287796All Organisms → cellular organisms → Bacteria → Terrabacteria group568Open in IMG/M
3300019877|Ga0193722_1002725All Organisms → cellular organisms → Bacteria4281Open in IMG/M
3300021046|Ga0215015_10364737All Organisms → cellular organisms → Bacteria → Terrabacteria group998Open in IMG/M
3300021080|Ga0210382_10071384All Organisms → cellular organisms → Bacteria1406Open in IMG/M
3300021344|Ga0193719_10180493Not Available905Open in IMG/M
3300021445|Ga0182009_10003338All Organisms → cellular organisms → Bacteria4751Open in IMG/M
3300025910|Ga0207684_10150132All Organisms → cellular organisms → Bacteria2005Open in IMG/M
3300025910|Ga0207684_10201156All Organisms → cellular organisms → Bacteria1718Open in IMG/M
3300025922|Ga0207646_10321783All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300025922|Ga0207646_10809431Not Available834Open in IMG/M
3300025949|Ga0207667_10281189All Organisms → cellular organisms → Bacteria1700Open in IMG/M
3300026078|Ga0207702_10999928All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300026300|Ga0209027_1046423All Organisms → cellular organisms → Bacteria1633Open in IMG/M
3300026316|Ga0209155_1145618Not Available800Open in IMG/M
3300026319|Ga0209647_1053347All Organisms → cellular organisms → Bacteria2157Open in IMG/M
3300026326|Ga0209801_1314401Not Available555Open in IMG/M
3300026330|Ga0209473_1278447Not Available563Open in IMG/M
3300026538|Ga0209056_10285047All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300026542|Ga0209805_1430265Not Available512Open in IMG/M
3300026548|Ga0209161_10420607Not Available587Open in IMG/M
3300026550|Ga0209474_10004459All Organisms → cellular organisms → Bacteria12096Open in IMG/M
3300027857|Ga0209166_10560443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium583Open in IMG/M
3300028768|Ga0307280_10368842Not Available532Open in IMG/M
3300032163|Ga0315281_10316502All Organisms → cellular organisms → Bacteria1700Open in IMG/M
3300032421|Ga0310812_10046834All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1652Open in IMG/M
3300033412|Ga0310810_10113005All Organisms → cellular organisms → Bacteria3220Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil17.27%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost16.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere15.45%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.36%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil6.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.36%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.64%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.82%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.82%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.82%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.91%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.91%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.91%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.91%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.91%
Weathered Mine TailingsEnvironmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908032Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_allEnvironmentalOpen in IMG/M
3300000880Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300000887Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001333Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002906Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007821Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 SoapdenovoEnvironmentalOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011991Permafrost microbial communities from Nunavut, Canada - A34_65cm_12MEnvironmentalOpen in IMG/M
3300011994Permafrost microbial communities from Nunavut, Canada - A7_65cm_12MEnvironmentalOpen in IMG/M
3300011999Permafrost microbial communities from Nunavut, Canada - A28_65cm_6MEnvironmentalOpen in IMG/M
3300012004Permafrost microbial communities from Nunavut, Canada - A30_5cm_6MEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012982Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfieldEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300013831Permafrost microbial communities from Nunavut, Canada - A21_5cm_6MEnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300014054Permafrost microbial communities from Nunavut, Canada - A34_5cm_12MEnvironmentalOpen in IMG/M
3300015086Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5c, rocky medial moraine)EnvironmentalOpen in IMG/M
3300015161Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1B, Ice margin)EnvironmentalOpen in IMG/M
3300015162Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015199Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Perma_A_C_030908202124908032SoilVTSEKTSTTSIDDPDVIATTVREAAERNTKALREQQVPIAVEPPTVFRP
AL20A1W_101875623300000880PermafrostVTSEKTSTTSIDDPDVIATTVREAAERNTKALREQQVPISVEPPTVFRP*
AL20A1W_121558723300000880PermafrostMAPNTAPKTAPSIDDPDAIATLIREAAERTEKALRERPVPIAVEPPTVFRP*
AL20A1W_137899523300000880PermafrostVTSEKPSTTSIDDPDAIATAVREAAERNTSALREQQVEIAVEPPTVFRP*
AL16A1W_1002368623300000887PermafrostVPSEKTSTTSIDDPDVIATTVREAAERNTKALREQQVPIAVEPPTVFRP*
A21PFW6_108003113300001333PermafrostVTSETTSTTSIDDPDAIAETIREAAERNTKALRERPLPIAVEPPTVFRP*
A1565W1_1080655913300001536PermafrostPGPRVPRYPRAPVTSEKTSTTSIDDPDVIATTVREAAERNTKALREQQVPISVEPPTVFRP*
A10PFW1_1141054523300001538PermafrostVTSETTSTTSIDDPDAIAETIREAAERNTQALRERPLPIAVEPPTVFRP*
A10PFW1_1240925333300001538PermafrostMTSETQRSIDDPDAIATTIREATERTEKALRSSPVPIAVEPPTVFRP*
JGI25614J43888_1010763923300002906Grasslands SoilVTSETPSPASIDDPDAIETTVREAAERNAKALRDREVPIAVEPPTVFRP*
JGI25616J43925_1000334653300002917Grasslands SoilVASEQQKSIDDDDVIATTVREAAERNAKTLREQQIPIATEPPTVFKP*
Ga0062589_10042658623300004156SoilVSSEKTSTTSIDEPDAIAETIREAAERNTKALRERPLPIAVEPPTVLRP*
Ga0062591_10098485413300004643SoilVSSEKTSTTSIDEPDAIAETIREAAERNTKALRERPLPIAVEPPTVFRP*
Ga0066673_1004950123300005175SoilMTSEEASPPSIDDPESIATTVREAAERNVKALRERPIDISVEPPTVFRP*
Ga0066678_1075045523300005181SoilVTSEKTSPKTSPPSIDDPETIAITVREAADRNTKALRERPIDIAVEPPTVFRP*
Ga0065712_1044445523300005290Miscanthus RhizosphereVSTEKTSTASIDDPDAIAETIREAAERNTKALRERPLPIAVEPPTVFRP*
Ga0070709_1023367523300005434Corn, Switchgrass And Miscanthus RhizosphereVSSEKTSTTSIDDPDAIAETIREAAERNTKALRERPVPIEAEPPTVFRP*
Ga0070708_10002153353300005445Corn, Switchgrass And Miscanthus RhizosphereVTSETTASTSIDDPDAIATTVREAAERNAKALREQQVPIDVEPPTVFRP*
Ga0070708_10014709823300005445Corn, Switchgrass And Miscanthus RhizosphereVTSETPSPASIDDPDVIETTVREVAERNAKALRDREVPIAVEPPTVFRP*
Ga0066681_1025018323300005451SoilMTPEEASPPSIDDPESIATTVREAAERNVKQLRERPIDISVEPPTVFRP*
Ga0066687_1006932223300005454SoilVSSDKTSDASIDDPDAIAATIREAAERNTKALREQAVPIALEPPTVFRP*
Ga0070706_10021344123300005467Corn, Switchgrass And Miscanthus RhizosphereVTSETPSPASIDDPDVIETTVREAAERNAKALRDRAVPIEVEPPTVFRP*
Ga0070707_10020184323300005468Corn, Switchgrass And Miscanthus RhizosphereVTSETTASTSIDDPDAIATTVREAAERNAKALRERQVPIDVEPPTVFRP*
Ga0070707_10075281923300005468Corn, Switchgrass And Miscanthus RhizosphereVTSETPSPASIDDPDVIETTVREAAERNAKALRDREVPIALEPPTVFRP*
Ga0070698_100001990113300005471Corn, Switchgrass And Miscanthus RhizosphereVTSETPSPASIDDPDAIETTVREAAERNAKALREREVPIAVEPPTVFRP*
Ga0070698_100016517113300005471Corn, Switchgrass And Miscanthus RhizosphereVTSETPSKASIDDPDAIETTVREAAERNTKALREREVPIAVEPPTVFRP*
Ga0070698_10113655823300005471Corn, Switchgrass And Miscanthus RhizosphereVASDKTSTTSIDDPDAIATTIREASERNTKALREQPVTIEVEPPTVFRP*
Ga0070699_10002094763300005518Corn, Switchgrass And Miscanthus RhizosphereVTSETPSPASIDDPEAIETTVREAAERNAKVLREREVPIAVEPPTVFRP*
Ga0070699_10079146723300005518Corn, Switchgrass And Miscanthus RhizosphereVSSEKTSTASIDDPDAIAETIREATERNTKALRERPLPIAVEPPTVFRP*
Ga0070730_1072520723300005537Surface SoilPVASETPAQTSIDDPDVIETAVREAAERNAKALRERAVPIEVEPPTVFTP*
Ga0068853_10094069613300005539Corn RhizosphereVSSEKTSTTSIDEPDAIAETIREAAERNTKALRERPLPIA
Ga0070704_10062036623300005549Corn, Switchgrass And Miscanthus RhizosphereVSTEKTSTTSIDDPDAIAETIREAAERNTKALRERPLPIAVEPPTVFRP*
Ga0066701_1058770523300005552SoilVTSETPSPASIDDPDAIETTVREAAERNVKTLREREVPIALEPPTVFKP*
Ga0066701_1081875223300005552SoilSPKTSPPSIDDPETIAITVREAADRNTKALRERPIDIAVEPPTVFRP*
Ga0066699_1002758533300005561SoilVTSEEAPPPSIDDPESIATTVREAAERNVKALRERPIDISVEPPTVFRP*
Ga0068855_10049972523300005563Corn RhizosphereVSTEKTSTASIDDPDAIAETIREAAERNTKALRERPLPIAVEPPTVLRP*
Ga0066703_1050500123300005568SoilVTSETPSPVSIDDPDVIETTVREAAERNAKALRDREVPIAVEPPTVFRP*
Ga0066705_1017639723300005569SoilVTSETPSPTSIDDPDAIESTVREAAERNAKALRDREVPIAVEPPTVFRP*
Ga0066706_1034951823300005598SoilVTSEKASTTSIDDPEAIATTIREAAERNMKALREQPVPITVEPPTVFRP*
Ga0066696_1015211123300006032SoilMTSEEASPPSIDDPESIATTVREVAERNVKALRERPIDISVEPPTVFRP*
Ga0066652_10074195923300006046SoilVTSAKTSAPSIDDPDAIAETIREAAERNTKALREQGVPIALEPPTVFRP*
Ga0070715_1064715713300006163Corn, Switchgrass And Miscanthus RhizosphereAPVSADKTSTTSIDDPDAIAATIREAAERNTSALREQSVAIAVEPPTVFRP*
Ga0066665_1082298023300006796SoilPRVPRYPRAPVTSETPSAASIDDPDAIETTVREAAERNVKTLREREVPIALEPPTVFKP*
Ga0066665_1082608223300006796SoilVTSETPTPASIDDPDAIETTVREAAERNAKALRDREVPIAVEPPTVFRP*
Ga0079220_1210034113300006806Agricultural SoilVTSETPTPASIDDPDVIETTVREAAERNAKALRDRAVPIAVEPPTVFRP*
Ga0075425_10145140623300006854Populus RhizosphereVTSEKAPAASIDDPDAIATTVREAAERNTKALREQQVPIAVEPPTVFRP*
Ga0075426_1012715023300006903Populus RhizosphereVTSETPAQASIDDPDVIETAVREAAERNAKALRERAVPIEVEPPTVFKP*
Ga0104323_12609423300007821SoilVTSEKTSTTSIDDPDVIATTVREAAERNTKALREQQVPIAVEPPTVFRP*
Ga0102924_108359013300007982Iron-Sulfur Acid SpringVTAKKSSAKNATTAIDDPDVTATTVREAAERNAAALREQQVPIAVEPPTVFRP*
Ga0066710_10074824923300009012Grasslands SoilVTSETPSPASIDDPDAIETTVREAAERNVKTLREREVPIALEPPTVFKP
Ga0099828_1054192323300009089Vadose Zone SoilVTSETPSPASIDDPDAIETTVREAAERNTKALREREVPIAVEPPTVFRP*
Ga0066709_10169522223300009137Grasslands SoilVTSETPSAASIDDPDAIETTVREAAERNVKTLREREVPIALEPPTVFKP*
Ga0134084_1039330623300010322Grasslands SoilMTSEEASPPSIDDPESIATTVREAAERNVKQLRERPIDISVEPPTVFRP*
Ga0134128_1024957823300010373Terrestrial SoilVSTEKTSTTSIDDPDAIAETIREAAERNTKALRERPLPIAIEPPTVFRP*
Ga0134121_1057568523300010401Terrestrial SoilVSSEKTSTTSIDDPDAIAETIREAAERNTKALRERPLPIVVEPPTVFRP*
Ga0120153_105182123300011991PermafrostMTSETTGSIDDPDAIATTIREATERTEKALRSSPVPIGVEPPTVFRP*
Ga0120157_101138323300011994PermafrostMASEKPTSIDDPDAIATVVREAAERTEKALRERPVPIAVEPPTVFRP*
Ga0120157_103847123300011994PermafrostVGSESSGTIDDPDAIATTIREAAERTEKALRDRPVPIAVEPPTVYRP*
Ga0120148_107313613300011999PermafrostVTSETTSTTSIDDPDAIAETIREAAERNTQALREQPLPIAVEPPTVF
Ga0120134_101136523300012004PermafrostVSSEKTSTTSIDDPDAIAETIREAAERNTKALRERPLPIAVEPPTVFRP*
Ga0120139_105097423300012019PermafrostVSSEKTSTTSIDDPDAIAETIREAAERNTKALRERPLPIAIEPPTVFRP*
Ga0137376_1024494423300012208Vadose Zone SoilVTSEKASTTSIDDPEAIATTIREAAERNMKALRERPVPITVEPPTVFRP*
Ga0137379_1123852423300012209Vadose Zone SoilVTSETPSPASIDDPDAIETTVREGAERNVKALREREVPIALEPPTVYRP*
Ga0137378_1128003223300012210Vadose Zone SoilVTSEEASPPSIDDPESIATIVREAAERNVKALRERPIDISVEPPTVFRP*
Ga0137377_1161445823300012211Vadose Zone SoilIDDPDVIETTVREAAERNAKALRDREVPIAVEPPTVFRP*
Ga0137372_1086680623300012350Vadose Zone SoilVTSEEASPPSIDDPESIATTVREAAERNVKALRERPIDISVEPPTVFRP*
Ga0137371_1114820523300012356Vadose Zone SoilVSSEKTSPPSIDDPESIATTVREAAERNVKALRERPIEISVEPPTVFRP*
Ga0137375_1097740323300012360Vadose Zone SoilVTSEKPSATPAATSIDDPDVIDTTIREAAERNTKALREQQVPIALEPPTVFRP*
Ga0137390_1023417133300012363Vadose Zone SoilPASIDDPDAIETTVREAAERNTKALREREVPIAVEPPTVFRP*
Ga0137373_1048691623300012532Vadose Zone SoilVSSEKTPATPAATSIDDPDAIETTIRESAERNAKALREQQVPIALEPPTVFRP*
Ga0137359_1046652513300012923Vadose Zone SoilVTSEKTSPTSIDDPDAIVATIREAAERNTKALREQEVPIVTEPPVVFRP*
Ga0168317_106968223300012982Weathered Mine TailingsVTAKKSSAKNATTAIDDPDVTATTVREAAERNTAALREQQLPIAVEPPTVFRP*
Ga0157372_1287125823300013307Corn RhizosphereVSSEKTSTTSIDEPDAIAETIREAAERNTKALRERPVPIEAEPPTVFRP*
Ga0120154_103452023300013501PermafrostVTSETQRSIDDPDAIAATIREATERTEKALRSSPVPIAVEPPTVFRP*
Ga0120126_104752023300013831PermafrostVSSEKTSTTSIDDPDAIAETIREAAERNTKALRERPVPIAAEPPTVFRP*
Ga0120109_102312513300014052PermafrostVTSEKTSTTSIDDPDAIAVTIREAAERNTKALRERPVPIAVEPPTVFRP*
Ga0120135_100620523300014054PermafrostVSSEKTSTTSIDDPDAIAETIRDAAERNTKALRERPVPIAAEPPTVFRP*
Ga0167655_100395373300015086Glacier Forefield SoilIIDDPAAIATVIREAAERTEKALRERPVPIAVEPPTVFRP*
Ga0167655_103785213300015086Glacier Forefield SoilMASEQQTSIDDPAAIATVIREAAERTEKALRERPVPIAVEPPTVFRP*
Ga0167623_104561723300015161Glacier Forefield SoilMASDKTSASTSSASIDDPDAIATTIREAADRNTKALRERPVPIAIEPPTVFRP*
Ga0167653_1000110303300015162Glacier Forefield SoilMASEKTSTTSIDDPDAIETTVREAAERNAKALRDHEVPIAVEPPTVFRP*
Ga0167653_102361313300015162Glacier Forefield SoilMASETTPTTSIDDPDAIETTVREAAERNTKALREQQVPIALEPPTVFRP*
Ga0167658_1002199143300015195Glacier Forefield SoilMASDKPTSIDDPDAIAAVIREAAERTEKALRERPVPIAVEPPTVFRP*
Ga0167647_111320413300015199Glacier Forefield SoilTLSSRSMASEKPTSIDDPDAIATVIREAAERTEKALRERPVPIAVEPPTVFRP*
Ga0066662_1228779623300018468Grasslands SoilVTSETPSPASIDDPDAIETTVREGAERNVKALREREVPIALEPPTVFKP
Ga0193722_100272533300019877SoilVSSEKTSTTSIDDPDAIAETIREAAERNTKALRERPVPIAVEPPTVFRP
Ga0215015_1036473713300021046SoilVTSQTPSPASIDDPDAIETTVREAAERNTKSLRERPVPIAVEPPTVFRP
Ga0210382_1007138423300021080Groundwater SedimentVTSEKPSTTSIDDPDAIATAVREAAERNTSALREQQVPIAVEPPTVFRP
Ga0193719_1018049313300021344SoilVTSEKPSAASIDDPDAIATAVREAAERNTSALREQQVPIAVEPPTVFRP
Ga0182009_1000333823300021445SoilVSTEKTSTTSIDDPDAIAETIREAAERNTKALRERPLPIAVEPPTVLRP
Ga0207684_1015013223300025910Corn, Switchgrass And Miscanthus RhizosphereVTSETPSPASIDDPDVIETTVREAAERNAKALRDRAVPIEVEPPTVFRP
Ga0207684_1020115623300025910Corn, Switchgrass And Miscanthus RhizosphereVTSETTASTSIDDPDAIATTVREAAERNAKALREQQVPIDVEPPTVFRP
Ga0207646_1032178313300025922Corn, Switchgrass And Miscanthus RhizosphereVTSETPSPASIDDPDVIETTVREAAERNAKALRDREVPIALEPPTVFRP
Ga0207646_1080943123300025922Corn, Switchgrass And Miscanthus RhizosphereVTSETTASTAIDDPDAIATTVREAAERNAKALRERQVPIDVEPPTVFRP
Ga0207667_1028118923300025949Corn RhizosphereVSTEKTSTASIDDPDAIAETIREAAERNTKALRERPLPIAVEPPTVLRP
Ga0207702_1099992823300026078Corn RhizosphereVSSEKTSTTSIDEPDAIAETIREAAERNTKALRERPLPIAVEPPTVFRP
Ga0209027_104642323300026300Grasslands SoilVTSETPPPASIDDPDVIETTIREAAERNVKALRERPLPIEVEPPTVFRP
Ga0209155_114561813300026316SoilMTPEEASPPSIDDPESIATTVREAAERNVKQLRERPIDISVEPPTVFRP
Ga0209647_105334733300026319Grasslands SoilVTSETPSPASIDDPDAIETTVREAAERNAKALRDREVPIAVEPPTVFRP
Ga0209801_131440123300026326SoilVTSEKTSPKTSPPSIDDPETIAITVREAADRNTKALRERPIDIAVEPPTVFRP
Ga0209473_127844723300026330SoilMTSEEASPPSIDDPESIATTVREAAERNVKALRERPIDISVEPPTVFRP
Ga0209056_1028504723300026538SoilVTSETPSAASIDDPDAIETTVREAAERNVKTLREREVPIALEPPTVFKP
Ga0209805_143026523300026542SoilVTSEEAPPPSIDDPESIATTVREAAERNVKALRERPIDISVEPPTVFRP
Ga0209161_1042060723300026548SoilVTSEKASTTSIDDPEAIATTIREAAERNTKALREQPVPITVEPPTVFRP
Ga0209474_10004459183300026550SoilMTSEEASPPSIDDPESIATTVREVAERNVKALRERPIDISVEPPTVFRP
Ga0209166_1056044313300027857Surface SoilPRAPVASETPAQTSIDDPDVIETAVREAAERNAKALRERAVPIEVEPPTVFTP
Ga0307280_1036884223300028768SoilVSSEKTSTTSIDDPDAIVETIREAAERNTKALRERPLP
Ga0315281_1031650223300032163SedimentVTSDKTATTSMDDPDAIATTIREAAERNAKALREQQVPIAVEPPTVFRP
Ga0310812_1004683413300032421SoilVSTEKTSTASIDDPDAIAETIREAAERNTKALRERPLPIAIEPPTVFRP
Ga0310810_1011300523300033412SoilVSTEKTSTASIDDPDAIAETIREAAERNTKALRERPLPIAVEPPTVFRP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.