Metagenome / Metatranscriptome Family F087699

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087699
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	83 residues
Representative Sequence	MMNLKIVTGVIALFMFAGAAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWEIKSDSVKLDEHVGHTVKI
Number of Associated Samples	94
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.25 %
% of genes near scaffold ends (potentially truncated)	95.45 %
% of genes from short scaffolds (< 2000 bps)	87.27 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (23.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.51% β-sheet: 9.17% Coil/Unstructured: 74.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00072	Response_reg	5.45
PF13545	HTH_Crp_2	3.64
PF04972	BON	2.73
PF04366	Ysc84	2.73
PF00882	Zn_dep_PLPC	2.73
PF11752	DUF3309	1.82
PF00027	cNMP_binding	1.82
PF07700	HNOB	1.82
PF04945	YHS	1.82
PF13444	Acetyltransf_5	1.82
PF08238	Sel1	0.91
PF00120	Gln-synt_C	0.91
PF13194	DUF4010	0.91
PF01121	CoaE	0.91
PF05239	PRC	0.91
PF00375	SDF	0.91
PF02371	Transposase_20	0.91
PF14279	HNH_5	0.91
PF16640	Big_3_5	0.91
PF13358	DDE_3	0.91
PF02518	HATPase_c	0.91
PF02687	FtsX	0.91
PF02308	MgtC	0.91
PF04014	MazE_antitoxin	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	2.73
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	0.91
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.91
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.91
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.09 %
Unclassified	root	N/A	40.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.09 %
Unclassified	root	N/A	40.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.09 %
Unclassified	root	N/A	40.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.73 %
Unclassified	root	N/A	40.91 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.91 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.36 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.82 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.64 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.36 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.82 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.91 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.36 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.91 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.91 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.91 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.36 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.91 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.91 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.91 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.36 %
Leptolyngbya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya	0.91 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.91 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.91 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.36 %
Nitrospira sp. SCGC AG-212-E16	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16	0.91 %
unclassified Leptolyngbya	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya	0.91 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.91 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.36 %
Leptolyngbya sp. FACHB-711	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp. FACHB-711	0.91 %
Nitrospira sp. SCGC AG-212-E16	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16	0.91 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.91 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918008\|ConsensusfromContig369005	Not Available	608	Open in IMG/M
3300000789\|JGI1027J11758_12683922	Not Available	503	Open in IMG/M
3300001160\|JGI12654J13325_1017457	Not Available	536	Open in IMG/M
3300001545\|JGI12630J15595_10045313	Not Available	886	Open in IMG/M
3300001593\|JGI12635J15846_10734609	Not Available	568	Open in IMG/M
3300003505\|JGIcombinedJ51221_10426836	Not Available	537	Open in IMG/M
3300005334\|Ga0068869_101560248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300005335\|Ga0070666_10177015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1495	Open in IMG/M
3300005336\|Ga0070680_101401077	Not Available	605	Open in IMG/M
3300005439\|Ga0070711_102070080	Not Available	501	Open in IMG/M
3300005445\|Ga0070708_100229585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1741	Open in IMG/M
3300005467\|Ga0070706_101156986	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300005518\|Ga0070699_101843063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300005536\|Ga0070697_100403523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1186	Open in IMG/M
3300005557\|Ga0066704_10085674	All Organisms → cellular organisms → Bacteria → Acidobacteria	2049	Open in IMG/M
3300005561\|Ga0066699_10067621	All Organisms → cellular organisms → Bacteria	2262	Open in IMG/M
3300005586\|Ga0066691_10594412	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300005921\|Ga0070766_11042603	Not Available	563	Open in IMG/M
3300005952\|Ga0080026_10103812	Not Available	794	Open in IMG/M
3300006047\|Ga0075024_100775665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300006050\|Ga0075028_100221866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300006052\|Ga0075029_101046123	Not Available	565	Open in IMG/M
3300006172\|Ga0075018_10265701	Not Available	835	Open in IMG/M
3300006175\|Ga0070712_100237408	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300006176\|Ga0070765_101727259	Not Available	587	Open in IMG/M
3300009012\|Ga0066710_103370452	Not Available	608	Open in IMG/M
3300009029\|Ga0066793_10799684	Not Available	536	Open in IMG/M
3300009038\|Ga0099829_11054255	Not Available	674	Open in IMG/M
3300009038\|Ga0099829_11075358	Not Available	667	Open in IMG/M
3300010401\|Ga0134121_12320555	Not Available	576	Open in IMG/M
3300011271\|Ga0137393_10169337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1833	Open in IMG/M
3300012096\|Ga0137389_10549675	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300012189\|Ga0137388_10006983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7693	Open in IMG/M
3300012203\|Ga0137399_10066599	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300012209\|Ga0137379_10980458	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300012349\|Ga0137387_10953538	Not Available	618	Open in IMG/M
3300012357\|Ga0137384_10649207	Not Available	859	Open in IMG/M
3300012361\|Ga0137360_10129335	Not Available	1975	Open in IMG/M
3300012917\|Ga0137395_10399123	All Organisms → cellular organisms → Bacteria → Acidobacteria	984	Open in IMG/M
3300012918\|Ga0137396_10239704	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300012918\|Ga0137396_10764712	Not Available	711	Open in IMG/M
3300012986\|Ga0164304_10589399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300013100\|Ga0157373_10030024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3912	Open in IMG/M
3300013105\|Ga0157369_11306213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300014498\|Ga0182019_11044717	Not Available	595	Open in IMG/M
3300015372\|Ga0132256_103444518	Not Available	532	Open in IMG/M
3300018027\|Ga0184605_10243101	Not Available	818	Open in IMG/M
3300019881\|Ga0193707_1119522	Not Available	769	Open in IMG/M
3300020579\|Ga0210407_10163794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1718	Open in IMG/M
3300020580\|Ga0210403_10095044	All Organisms → cellular organisms → Bacteria → Acidobacteria	2413	Open in IMG/M
3300020580\|Ga0210403_10331495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1246	Open in IMG/M
3300020581\|Ga0210399_10231332	Not Available	1540	Open in IMG/M
3300020581\|Ga0210399_10958746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300021046\|Ga0215015_10749491	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300021168\|Ga0210406_10884837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300021170\|Ga0210400_10439970	All Organisms → cellular organisms → Bacteria → Acidobacteria	1076	Open in IMG/M
3300021170\|Ga0210400_11203650	Not Available	610	Open in IMG/M
3300021178\|Ga0210408_10402472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300021178\|Ga0210408_11042901	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300021180\|Ga0210396_10263868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1529	Open in IMG/M
3300021180\|Ga0210396_10357087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300021432\|Ga0210384_10132554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2236	Open in IMG/M
3300021432\|Ga0210384_10471417	All Organisms → cellular organisms → Bacteria → Acidobacteria	1130	Open in IMG/M
3300021478\|Ga0210402_10379421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1312	Open in IMG/M
3300021478\|Ga0210402_10926210	All Organisms → cellular organisms → Bacteria → Acidobacteria	798	Open in IMG/M
3300021479\|Ga0210410_10773687	Not Available	844	Open in IMG/M
3300021479\|Ga0210410_11001750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300021559\|Ga0210409_10655873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300025533\|Ga0208584_1114930	Not Available	633	Open in IMG/M
3300025581\|Ga0208355_1062837	Not Available	869	Open in IMG/M
3300025581\|Ga0208355_1114277	Not Available	557	Open in IMG/M
3300025910\|Ga0207684_10021378	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5524	Open in IMG/M
3300025912\|Ga0207707_10331665	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1313	Open in IMG/M
3300025917\|Ga0207660_11230152	Not Available	609	Open in IMG/M
3300025939\|Ga0207665_10524703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300025942\|Ga0207689_11279232	Not Available	616	Open in IMG/M
3300026088\|Ga0207641_11276709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300026361\|Ga0257176_1011308	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300026542\|Ga0209805_1044754	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300027587\|Ga0209220_1053133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → unclassified Leptolyngbya → Leptolyngbya sp. FACHB-711	1081	Open in IMG/M
3300027645\|Ga0209117_1149267	Not Available	611	Open in IMG/M
3300027660\|Ga0209736_1014759	All Organisms → cellular organisms → Bacteria → Acidobacteria	2462	Open in IMG/M
3300027674\|Ga0209118_1043662	All Organisms → cellular organisms → Bacteria → Acidobacteria	1341	Open in IMG/M
3300027765\|Ga0209073_10361029	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300027884\|Ga0209275_10578548	Not Available	644	Open in IMG/M
3300027894\|Ga0209068_10161842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1216	Open in IMG/M
3300027911\|Ga0209698_10896769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300028047\|Ga0209526_10171748	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1512	Open in IMG/M
3300028047\|Ga0209526_10212503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1336	Open in IMG/M
3300028047\|Ga0209526_10278961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1136	Open in IMG/M
3300028536\|Ga0137415_10647986	Not Available	868	Open in IMG/M
3300028536\|Ga0137415_11099710	Not Available	608	Open in IMG/M
3300028679\|Ga0302169_10080036	Not Available	778	Open in IMG/M
3300028679\|Ga0302169_10170610	Not Available	553	Open in IMG/M
3300028739\|Ga0302205_10055290	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300028828\|Ga0307312_10440563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300029636\|Ga0222749_10105397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300029989\|Ga0311365_10741954	Not Available	850	Open in IMG/M
3300030014\|Ga0302175_10001654	All Organisms → cellular organisms → Bacteria → Proteobacteria	5569	Open in IMG/M
3300030047\|Ga0302286_10084288	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300030114\|Ga0311333_10580295	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SCGC AG-212-E16	926	Open in IMG/M
3300031122\|Ga0170822_15982054	Not Available	517	Open in IMG/M
3300031231\|Ga0170824_125938712	Not Available	557	Open in IMG/M
3300031720\|Ga0307469_10071208	All Organisms → cellular organisms → Bacteria → Acidobacteria	2305	Open in IMG/M
3300031820\|Ga0307473_10632398	Not Available	743	Open in IMG/M
3300031962\|Ga0307479_10150410	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2283	Open in IMG/M
3300032205\|Ga0307472_100290393	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300033412\|Ga0310810_10971801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300033475\|Ga0310811_10902602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.64%
Host-Associated	Host-Associated	6.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.27%
Aquatic	Environmental → Aquatic	6.36%
Plants	Host-Associated → Plants	6.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.91%
Sediment	Environmental → Aquatic → Sediment	6.36%
Peat	Environmental → Terrestrial → Peat	6.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.45%
Loam	Environmental → Terrestrial → Soil → Loam	22.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.45%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.27%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.36%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.91%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.91%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001160	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental	Open in IMG/M
3300028739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_3	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_01567350	2140918008	Soil	MMNFKITTGVIALFMFVGAAGVATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWEIKSDSVKLDEHVGHTVKI
JGI1027J11758_126839221	3300000789	Soil	MNLKIVTGVIALFMFVGAVGLATAQDTTKTTHKXXRXLTGCLQKGXDXNEYXFXAKSGATWEIKS
JGI12654J13325_10174572	3300001160	Forest Soil	MMNLKIVTGIIALFMFAGAAGLATAQDAPKTTHKKTRTLTGCLQKGEDANEFNLTVKDGGTWEIKSDSLKLGEHVGHTVKIT
JGI12630J15595_100453132	3300001545	Forest Soil	MNLKISTAVIALFMFAGAAGLATTKTTHKKTRVITGCLQKGEDANEYNLAAKNGGTWEVKSDTVKLSEHVGHTVTITGVVANAKAHGM
JGI12635J15846_107346091	3300001593	Forest Soil	MKGKIAAGFIAVMMFATVVGLAAAQTTKATHKKTRTLTGCLQKGEGADEYNLTTKGGGTWEIKSDSVKLGDHVGHAVTVTG
JGIcombinedJ51221_104268362	3300003505	Forest Soil	MNLKIVTGIIALFMFADAARLATAQDTTKTTHKKTRTLTGCLQKGDDANEYNLTTKKGSTWEIKSDSVKLGEHVGHTVTITGVVSHHKEHAMKEDTKAEMKEH
Ga0068869_1015602482	3300005334	Miscanthus Rhizosphere	MNLRIVTGVIALFVFAGAAGVATAQETTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDEHVGHMVKITGVV
Ga0070666_101770151	3300005335	Switchgrass Rhizosphere	MNRKILTGVIALFMFAGTADLATAQGTTKETHKKARTLTGCLQKGEDANEYNFTAKDGGKWEIKSDSVKLDEHVGHTVKITG
Ga0070680_1014010771	3300005336	Corn Rhizosphere	MKLRIVTGLIALFMFAGVAGLVTAQDTTKTTHKKTRTLTGCLQKGEDANEYNLTAKGGGTWEIKSDSVNLDEHVGHTVKVVGVVSNATMHGMKEDAKEE
Ga0070711_1020700801	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNLKIVTAVVALFVFVGGAGLATAEDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSV
Ga0070708_1002295853	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNLKIVTGIIALFMFADAAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEI
Ga0070706_1011569861	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKGKIAAGFIAVMMFATVVGLATAQDTTKATHKKTRTLTGCLQKGDDANEYNLTTKGGATWEIKSDSVKLDDHVGHTVAV
Ga0070699_1018430632	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNLKIVTGVIALFMFAGAAGLATAQDTTKTTHKKTRTLTGCLQKGEEPNEYNFIAKDGGTWEIKSDSVKLDEHVGHTVKII
Ga0070697_1004035231	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNLKIVTGVIALFMFAGAAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDEHVGH
Ga0066704_100856745	3300005557	Soil	MKGKIAAGFIAVMMFATVVALATAQDTTKATHKKTRTLTGCLQKGEGTNEYNLTTKGGATWE
Ga0066699_100676211	3300005561	Soil	MNLKIVTGIIALFMFAGAAGLATADDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKNGGTWEIKSDSVNLGEHVGHT
Ga0066691_105944122	3300005586	Soil	MKGKIAAGFIAVMMFATVVALATAQDTTKATHKKTRTLTGCLQKGEGTNEYNLTTKGGATWEIKSDS
Ga0070766_110426031	3300005921	Soil	MFAGTAGLATAQDTTSITHRKTRTFSGCLEKSADADEYQLTTKAGGTWEIKSDSVKLGPDVGHSVLVTGVVSDATLYGLKEDTKSEAREHGINK
Ga0080026_101038121	3300005952	Permafrost Soil	MMNLRIVTGVIALFVFAGAAGLATAQETTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDEHVGHTVKITGVVSNAAAHGMKEDAKGEMQEH
Ga0075024_1007756652	3300006047	Watersheds	MNLKIVTGVIALFMFAGAVGLATAQDTTKTTHKKTRTLTGCLQKGEDANEFNLSVKDGGTWEIKSDSLKLGEHVGHTVKITGVV
Ga0075028_1002218662	3300006050	Watersheds	MNLKIVTGLIALFMFAGAAGLATAQDTTQTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWEIKSDSVKLDEHIGHTVKITGVVSNAMAHGMK
Ga0075029_1010461231	3300006052	Watersheds	MNLKIVTGVIALFMFVGAAGLATAEDGTKTHHKTRTLTGCLQKGEGTNEFNFTAKEGGTWEIRSDSVKLDEHVGHTVKIVGVVSNATAH
Ga0075018_102657012	3300006172	Watersheds	MNLKIVTGIIALFMFAGAAGLVTAEDTTKTTHKKTRTLTGCLQKGEDANEYNLATKDGGTWEIKSDSVNLG
Ga0070712_1002374081	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKLRIVTGLIALFMFAGVAGLVTAQDTTKTTHKKTRTLTGCLQKGEDANEYNLTAKGGGAWEIKSDSVKLDEHVGHTVKIV
Ga0070765_1017272591	3300006176	Soil	MNLKIVTGIIALFMFAGAVGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSVK
Ga0066710_1033704521	3300009012	Grasslands Soil	MNLKIVTAVMTLCMFAAAAGLATADDTTKTTHKKTRTLTGCLQKGEDANEYNLTAKNGGSLEINSDSVNLREHLGHIVKHTGVVSNIKVT
Ga0066793_107996841	3300009029	Prmafrost Soil	MNLKIVTGLIALFMFAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWEIKSDSVKLDKHVG
Ga0099829_110542552	3300009038	Vadose Zone Soil	MMNLKIVTGVIALFMFAGAAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWEIKSDSVKLDEHVGHTVKI
Ga0099829_110753581	3300009038	Vadose Zone Soil	MKIKLAMSAFVLFMFLGLAIAQDTTKTTHKKTRTLTGCLQKGDEASEYNLTTKAGGSWELKSDSVKLDEHVGHTVKVTGVVENAAMHGMKE
Ga0134121_123205551	3300010401	Terrestrial Soil	MINIRIVTGVIALFVFAGAAGGARAQETTKTTHQKTRTLTGCLQKGEDANEYNFAAKGGGTWEIKSNSVKLYEHVGH
Ga0137393_101693373	3300011271	Vadose Zone Soil	MSLKIMTWMMALFVFAGAVALATAEDTTKTTHKKTRTLTGCLQKGEDANEFNLSAKDGGTWEVKSDSVKLDEHVGH
Ga0137389_105496753	3300012096	Vadose Zone Soil	MKKRKIATEFIALIMLATIVGLATAQDTTKATHKKTRTLTGCLQKGEDANEYNLTTKGGATWEVKSDSVKLDEHVGHTVTVTGVVAHRKAHAMKEDTKA
Ga0137388_100069831	3300012189	Vadose Zone Soil	MMNLKIVTGVIALFMFAGAAGMATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDEH
Ga0137399_100665991	3300012203	Vadose Zone Soil	MKFKIAMTSLALFMFASTAGLATAQDTTKTTDKKTRTVSGCLQKGEDANEYNLTTAKGGTWEVKSDSVKLGDHVGHTVRITGVVSNAAMHGVKED
Ga0137379_109804582	3300012209	Vadose Zone Soil	MMNLKIVTGIVALFMIAGAAGLATAEDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKNGGTWEVKSDSVNLGDHVGHTVKITGVVSNATAHGMKEDAKEEMKE
Ga0137387_109535381	3300012349	Vadose Zone Soil	MKIKLAMSAFVLFMFLGLAIAQDTTKTTHKKTRTLTGCLQKGDEASEYNLTTKAGGSWELKSDSVKLDEHVGHTVKVTGVVENAAMHGMKEDTKEEMKE
Ga0137384_106492071	3300012357	Vadose Zone Soil	MKIKLAMSAFVLFMFLGLAIAQDTTKTTHKKTRTLTGCLQKGDEASEYNLTTKAGGSWELKSDSVKLDEHV
Ga0137360_101293352	3300012361	Vadose Zone Soil	MFGGAASLATAQDTKNNTHKKTRTLTGCLQKGEDVDEYTLTAKDGGTREIKSDSIKLDDHIGHTVTVTGVVSHHKNTR*
Ga0137395_103991232	3300012917	Vadose Zone Soil	MLATIVGLATAQDTTKATHKKTRTLTGCLQKGEDANEYNLTTKGGATWEVKSDSVKLDEHVGHTVTVTGVVAHRKAHAMKEDTKAEMKEHGMDKD
Ga0137396_102397041	3300012918	Vadose Zone Soil	MKGKIAAGFIAVMMFATVVGLATAQNTTKATHRKTRTLTGCLQKGGEDDNEYNLTTKDGATWEIKSDSVKLDDHVGH
Ga0137396_107647121	3300012918	Vadose Zone Soil	MKFKIAMTSLALFVFASSAGLATAQDTTKTTHKKTRTLSGCLQKGEDANEYNLTTAKGGTWEIKSDSVRLGDHVGHTVKITGVVSNAAMHGVKEDA
Ga0164304_105893992	3300012986	Soil	MMKLKIVTGLIALFVFAGVAGLATAQDTTKTTHKKTRTLTGCLQKGESANEYNLTAKDGGTWEIKSDSVKLD
Ga0157373_100300246	3300013100	Corn Rhizosphere	MMNLRIVTGVIALFVFAGAAGVATAQETTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDEHVGHTVKITGVVANATA
Ga0157369_113062132	3300013105	Corn Rhizosphere	MMNLRIVTGVIALFVFAGAAGVATAQETTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSV
Ga0182019_110447171	3300014498	Fen	MMNLKIMTGLIALFMFAGAAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNCIAKDGGAWEIKSDSVKLDEHVGHTVKIFGVVSNATMHGMKEDAKEEMKEH
Ga0132256_1034445181	3300015372	Arabidopsis Rhizosphere	MMNLRIVTGVIALFVFAGAAGVATAQETTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDEHVGHTV
Ga0184605_102431012	3300018027	Groundwater Sediment	MNLKIVTGVIALFMFAGAAGLATADDTTKTTHKKTRTLTGCLQKSDDANEYNFTAKSGGTWEIKSDSVNLGEHVGHTVKITGVVSNAKMHGMKED
Ga0193707_11195222	3300019881	Soil	MNLKIVTGIVALFMFAGLTGLATADDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKNGGTWEIKSDSVNLGEHVGHTVKITGVVSNAKM
Ga0210407_101637941	3300020579	Soil	MKFKIAMTSLALFMFASAAGLATAQDTTKTTHKKTRTLSGCLQKGEDANEYNLTTAKGGTWEIKSDSVRLGDHVGHTVKITGV
Ga0210403_100950441	3300020580	Soil	MKRKIATVFIAVIMLATVVGLATAQDATKATHKKARTLTGCLQKGEDANEYNLTTKGGATWEIKSDSVKLDEHVGHTVTVTGVVAHHKAHAMK
Ga0210403_103314951	3300020580	Soil	MNLKIVAGTIALFMFAGAAGLAAAQDTTKTTHKKTRALTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDDHVGHTVKIT
Ga0210399_102313323	3300020581	Soil	MNVKMVMGIIAFFMSTGAAGLAMAQDTPKNTHQKTRTLTGCLQKGDDANEYNLTAKDGGTWEVKSDSVKLGEHVGHTVK
Ga0210399_109587462	3300020581	Soil	MNLKIVTGIIAVFMFAGAVGLATAQDTPKTTHKKTRTLTGCLQKGEDASEYNFTAKGGGTWEIKSDSVKLDD
Ga0215015_107494911	3300021046	Soil	MKVKIAMAFLTLFMFAGTAGQATAQDKTKTTHKKVRTLTGCLQKGEDANEYNLTTANGGTWEITSDSLKLGDHVGHTVTITGVVSNATLHGAKEDATVSYTHLT
Ga0210406_108848372	3300021168	Soil	MNLKIVTGIIAVFMFAGAVGLVTAQDTPKTTHKKTRTLTGCLQKGDDANEYNLTTKKGSTWEIKSDSVK
Ga0210400_104399702	3300021170	Soil	MINIRIVTGVIALFVFAGAAGGATAQETTKTTHKKTRTLTGCLQKGEDVNEYNFTAKGGGTWEIKSDSVKLDEHVGHTVKITGVVSNATAHGMK
Ga0210400_112036501	3300021170	Soil	MKRKIATGFIAVIMLATLAGLATAQDTTKPTHKKTRTLTGCLQKGEDANEYNLTTKAGATWELKSDSVKLD
Ga0210408_104024722	3300021178	Soil	MNLKIVTGIIALFMFAGAAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDDHVGHTVK
Ga0210408_110429011	3300021178	Soil	MTFKMLAWIIAMFMLASIGLVTAQDTTKTTHKKTRTLTGCLQKGDSAGEYNLTTMKGGTWEVKSDSVKLGEHVGHTVTITGVVSNATAHGMKEDTKEEMKE
Ga0210396_102638684	3300021180	Soil	MKMKFAIGVLALLVFVGLSMAQDTTKTTHKKTRMLTGCLEKGNEANEFNLTTKTGGSWEIKSDSVKLEEHVGHTVKVTGVVANAEMHGMKEDTKEEMKE
Ga0210396_103570874	3300021180	Soil	MKRKIATVFIAVIMLATVVGLATAQDATKATHKKARTLTGCLQKGEDANEYNLTTKGGATWEIKSDSVKLDEHVGHTVTVTGVVEWSLTTKHTL
Ga0210384_101325541	3300021432	Soil	MNLKIVAGTIALFMFAGAAGLAAAQDTTKTTHKKTRALTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDDHVGHTVK
Ga0210384_104714172	3300021432	Soil	MTIKAVTVLSALLLFTSLAGVATAQEDTKTTHKKTRTLTGCLQKSGDGDEYRLTARDGGTWEIKSDTVRLGEHVGHTVRITGVVSNATLHGAKEDAKDEAKEHGV
Ga0210402_103794211	3300021478	Soil	MNLKIVAGTIALFMFAGAAGLAAAQDTTKTTHKKTRALTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDDHVGHTVKITGVVTNATAHGMKEDAKAEM
Ga0210402_109262101	3300021478	Soil	MKVKIAMGVFAFFMFMGAAGLVTAQDTKKTTHKKTRTLTGCLQKAEDAKEYNLTTKDGGTWEVKSDSVKLAPHVGHTMTITGVVSNAT
Ga0210410_107736872	3300021479	Soil	LATAQDTTKTTHKKTRTLTGCLRKGEDANEYNFTAKDGGTWEIKSDSVKLDEHVGHTVKITGVVSNAMAHGMKEDTKEEMKEHGMD
Ga0210410_110017501	3300021479	Soil	MNLKIVTGIIAVFMFAGAVGLATAQDTPKTTHKKTRTLTGCLQKGEDASEYNFTAKGGGTWEIKSDSVKLDDHVGHTVKITGVVANATAH
Ga0210409_106558731	3300021559	Soil	MINIRIVTGVIALFVFAGAAGGATAQETTKTTHKKTRTLTGCLQKGEDANEYNFAAKGGGTWEIKSDSVKLDEHVGHTVKITGVVANATAHGMKEDTK
Ga0208584_11149301	3300025533	Arctic Peat Soil	MNLKIVTGLIALFMFAGAAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWEIKSDSVKLDEHVGHTVKIVGVVSNAMAHGMKEDTKEEMKEH
Ga0208355_10628371	3300025581	Arctic Peat Soil	MNLKIVTGLIALFMFAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWEIKSDSVKLDEHVGHTVKITGVVVNATAHGMKE
Ga0208355_11142771	3300025581	Arctic Peat Soil	MNLKIVTGLIGLCMFAGVAGLATAQDTTETTHKKTRTITGCLQKGEDANEYSFTAKDGGTWEI
Ga0207684_100213785	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKIKFAMSAFVLFMFLGLAIAQDTTKTTHKKARTLTGCLQKGDEASEYNLTTKAGGSWELKSDSVKLDEHVGHTVKVTGVVENAAM
Ga0207707_103316651	3300025912	Corn Rhizosphere	MKVKIAMTFIALFIFAGATALATAQDTTKTTHKKTRTLTGCLQKGDSSNEYQLTTAKGGTWEIKSDTVKLGNHVGHTVTI
Ga0207660_112301521	3300025917	Corn Rhizosphere	MKLRIVTGLIALFMFAGVAGLVTAQDTTKTTHKKTRTLTGCLQKGEDANEYNLTAKGGGTWEIKSDSVNLDEHVGHTVKVVGVVSNA
Ga0207665_105247031	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKRKIVMGLIALFVFAGAAGLASAQDTTKTTHKKTRTLTGCLQKSEDAHEYNLTTKSGATWEIKSDSVKLDEHVGHTVKVT
Ga0207689_112792321	3300025942	Miscanthus Rhizosphere	MMNLRIVTGVIALFVFAGAAGVATAQETTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLDEHVGHMVKITGVVANA
Ga0207641_112767092	3300026088	Switchgrass Rhizosphere	MMNLRIVTGVIALFVFAGAAGVATAQETTKTTHKKTRTLTGCLQKGEDANEYNFTAMGGGTWEIKSDSVKLDEHVGHTVKITGAVANAT
Ga0257176_10113083	3300026361	Soil	MKFKIAMTSLALFMFASTAGLATAQDTTKTTHKKTRTLSGCLQKAEDANEYNLTTAKGGTWEIKSDSVKLGDHVGHTVRITGVVSNAAMHGVKED
Ga0209805_10447545	3300026542	Soil	MNLKIVTGIIALFMFAGAAGLATADDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKNGGTWEI
Ga0209220_10531331	3300027587	Forest Soil	MMNLKLVTAVVALFMFAGAAGLASTKTTHKKTRTLTGCLQKGEEASEYKLTAPDGATWEIKSDSVK
Ga0209117_11492671	3300027645	Forest Soil	MNLKIVTGIIALFMFAGAVGLATAQDTTKTTHKKTRTLTGCLQKGEDANQYNFTAKGGGTWEIKSDSVKLDEHVGHTVKITGV
Ga0209736_10147594	3300027660	Forest Soil	MKVKITMGVVVFLMLMGAGGLATAQSAKKTTHRKTRTVTGCLQKSGDDYNLTTKSGGTWEVTSDSVKLAPHVGHTVTVTGVVSNATLHGL
Ga0209118_10436622	3300027674	Forest Soil	MKVKIAMGVFAFFMFMGAAGLVTAQDTKKTTHKKTRTLTGCLQKAEDAKEYNLTTKDGGTWEVKSGSVKLAPHVGHTMTITGVVSNATLRGVK
Ga0209073_103610292	3300027765	Agricultural Soil	MNLKIVTGVIALFMFAGAVGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNLTTKGGATWEIKSDSVK
Ga0209275_105785481	3300027884	Soil	MRLKMAVVIGLFLFGTTAGLAMAQETTKTTHKKTRTLMGCLQKGEGTDEYELTVEKGGTWEIK
Ga0209068_101618421	3300027894	Watersheds	MNLKIVTGLIALFMFAGAAGLATAQDTTQTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWE
Ga0209698_108967692	3300027911	Watersheds	MKLKIVTGLIAVFMFAGAAGLATAQDATKATHKKTRTLTGCLQKGEDANEYNLTTKDGGTWEIKSDSVKLDDHVGHTVKITGVVPNAMAHGMK
Ga0209526_101717482	3300028047	Forest Soil	MRFRMAVVIGLFLFGIAAGLATAQETTKPTHKKTRTLMGCLQKGEGTDEYNLTAKDGGTWEIKSDSVKLGPHVGHTVTVTGVVSNATAHGLKEDTKDEAR
Ga0209526_102125033	3300028047	Forest Soil	MTGKMSAAFIAVIVFASVVGQGSAQETTKATHKKTRTITGCLQKGGDANEYNLTTKAGATWEIKSDSVKLDEHVGH
Ga0209526_102789611	3300028047	Forest Soil	MKGKIAAGFIALMMIATVVGLATAQNTEKATHKKTRTLTGCLQKGESANEYNLTTKGGATWEIKSDSVKLEDHVGHTVT
Ga0137415_106479861	3300028536	Vadose Zone Soil	MINIRIVTGVIALFVFAGAAGGATAQETTKTTHKKTRTLTGCLQKGEDANEYNFAAKGGGTWEIKSDSVKLDEHV
Ga0137415_110997101	3300028536	Vadose Zone Soil	MMNLKIVTGAIALFMFAGAVGLATAQDTTKTTHKKTRTLTGCLQKGDDANEYNFTAKAGGIWEIKSDSVKLDEHVGHTVKIT
Ga0302169_100800361	3300028679	Fen	MNLKIVTGLIALFMFAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFIAKDGGAWEIKSDSVKLDEHVGHTVKIFGVVSNATMHGMKEDAKEEMKEH
Ga0302169_101706101	3300028679	Fen	MNLKIVTGFIALFMFAGGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWEIKSDSVKLDEH
Ga0302205_100552902	3300028739	Fen	MNLKIVTGLIALFMFAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFIAKDGGAWEIKSDSVKL
Ga0307312_104405631	3300028828	Soil	MNLKIVTGIIALFMFAGAVGLATADDTTKTTHKKTRTLTGCLQKSEDANAYNFTAKNGGTWEVKSDSVNLGDHVGHTVKITGVVSNATAHGNEGRRKGRDERARHE
Ga0222749_101053972	3300029636	Soil	MTFKMLAWIIAMFMLTSIGLVTAQDATKTTHKKTRTLTGCLQKGDSADEYNLTTTKGGTWEVKSDSVKLGEHVGHTVTITGVVSNATAHGMKEDTKEEMKEHGM
Ga0222749_101460861	3300029636	Soil	MTIKAVTVLSALLLFTSLAGVATAQEDTKTTHKKTRTLTGCLQKSGDGDEYRLTARDGGTWEIKSDTVRLGEHVGHTVRIT
Ga0311365_107419543	3300029989	Fen	MNLKIVTGFIALFMFAGGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWEIKSDSVKLDE
Ga0302175_100016541	3300030014	Fen	MNLKIVTGLIALFMFAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFIAKDGGAWEIKSDSVKLDEHVGHTVKIFGVVSNATMHGMKED
Ga0302286_100842884	3300030047	Fen	MNLKIVTGLIALFMFAGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFIAKDGGAWEIKSDSVKLDEHVGHTVKIFGVVSNATMH
Ga0311333_105802953	3300030114	Fen	MNLKIVTGFIALFMFAGGLATAQDTTKTTHKKTRTLTGCLQKGEDANEYNFTAKDGGTWEIKSDSVKLDEHVGHTVKIV
Ga0170822_159820541	3300031122	Forest Soil	MINIRIVTGVIALFVFAGSAGGATAQETTKTTHKKTRTLTGCLQKGEDANEYNFAAKGGGTWEIKSDSVKLDEHVGH
Ga0170824_1259387121	3300031231	Forest Soil	MKVKIAMAFLALFMFAGAAALAPAQDTTKTTHKKTRTLTGCLQKGDDANEYRLTTMKGGTWEIKSDTVKLGDHVSHTVTITGVVSNATLHGAKEDAKAEAK
Ga0307469_100712084	3300031720	Hardwood Forest Soil	MNLKILTGIIALFMFAGAAALATAEDATKTTHKKTRTLTGCLQKGENANEYNFTAKNGGTWEIKSDSVNLGQHVGHTAKITGVVSNATVHGMKEDAKEEMKE
Ga0307473_106323981	3300031820	Hardwood Forest Soil	MNLKIVTGVIALFMFAGAVGLATAQDTTKATHKKTRTLTGCLQKGDDANEYSFTAKDGGTWEITSDSVKLDEHVGHTVKIV
Ga0307479_101504103	3300031962	Hardwood Forest Soil	MKLKIVTGLIALFMFAGGAGLATAQDTTKTTHKKTRMLTGCLQKGEDANEYNLTTKDGGTWEIKSDSVKLD
Ga0307472_1002903931	3300032205	Hardwood Forest Soil	MNLRIVTGVIALFVFAGTAGLGTAQETTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSV
Ga0310810_109718012	3300033412	Soil	MMNLRIATGVIALFVFAGAAGVATAQETTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGTWEIKS
Ga0310811_109026022	3300033475	Soil	MMNLRIATGVIALFVFAGAAGVATAQETTKTTHKKTRTLTGCLQKGEDANEYNFTAKGGGTWEIKSDSVKLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087699

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences