Metagenome / Metatranscriptome Family F087698

Basic Information
Family ID	F087698
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	39 residues
Representative Sequence	VEIDGTRVDDARRDMDLSKPAEFLLRAGKKKFLRVVVE
Number of Associated Samples	97
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.45 %
% of genes near scaffold ends (potentially truncated)	92.73 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (87.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.636 % of family members)
Environment Ontology (ENVO)	Unclassified (20.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 28.79% Coil/Unstructured: 71.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01266	DAO	36.36
PF01112	Asparaginase_2	22.73
PF02517	Rce1-like	6.36
PF04519	Bactofilin	4.55
PF00364	Biotin_lipoyl	1.82
PF00083	Sugar_tr	1.82
PF02195	ParBc	1.82
PF13502	AsmA_2	0.91
PF00551	Formyl_trans_N	0.91
PF13614	AAA_31	0.91
PF03950	tRNA-synt_1c_C	0.91
PF00579	tRNA-synt_1b	0.91
PF01479	S4	0.91
PF05164	ZapA	0.91
PF00078	RVT_1	0.91
PF13401	AAA_22	0.91
PF10604	Polyketide_cyc2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1446	Isoaspartyl peptidase or L-asparaginase, Ntn-hydrolase superfamily	Amino acid transport and metabolism [E]	22.73
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	6.36
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	6.36
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	4.55
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.91
COG3027	Cell division protein ZapA, inhibits GTPase activity of FtsZ	Cell cycle control, cell division, chromosome partitioning [D]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.27 %
Unclassified	root	N/A	12.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.27 %
Unclassified	root	N/A	12.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.27 %
Unclassified	root	N/A	12.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	51.82 %
Unclassified	root	N/A	12.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.36 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.00 %
Unclassified	root	N/A	12.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.73 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %
Unclassified	root	N/A	12.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.73 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.00 %
Unclassified	root	N/A	12.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10127580	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300001356\|JGI12269J14319_10051673	All Organisms → cellular organisms → Bacteria	2439	Open in IMG/M
3300002907\|JGI25613J43889_10141194	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300004091\|Ga0062387_100075868	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300004635\|Ga0062388_102962855	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005171\|Ga0066677_10842848	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005518\|Ga0070699_101023093	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005537\|Ga0070730_10084533	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2218	Open in IMG/M
3300005764\|Ga0066903_101873216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1148	Open in IMG/M
3300005921\|Ga0070766_10461580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	840	Open in IMG/M
3300005944\|Ga0066788_10028996	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300006050\|Ga0075028_100506195	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300006172\|Ga0075018_10267235	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300006175\|Ga0070712_101652194	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300006755\|Ga0079222_10166701	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300007788\|Ga0099795_10596471	Not Available	525	Open in IMG/M
3300009088\|Ga0099830_10293134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1297	Open in IMG/M
3300009101\|Ga0105247_10473267	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300009137\|Ga0066709_103474365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300009700\|Ga0116217_10982232	Not Available	517	Open in IMG/M
3300010358\|Ga0126370_11980852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300010362\|Ga0126377_10147296	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300010362\|Ga0126377_13068026	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300011270\|Ga0137391_11354038	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300012285\|Ga0137370_10616670	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300012683\|Ga0137398_10109145	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300012683\|Ga0137398_10230452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1229	Open in IMG/M
3300012929\|Ga0137404_10633192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300012931\|Ga0153915_11932764	Not Available	690	Open in IMG/M
3300012931\|Ga0153915_12679542	Not Available	583	Open in IMG/M
3300012964\|Ga0153916_10927100	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300013306\|Ga0163162_12509459	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300013308\|Ga0157375_11268803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300013832\|Ga0120132_1009396	All Organisms → cellular organisms → Bacteria → Acidobacteria	1601	Open in IMG/M
3300015051\|Ga0137414_1042208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300015053\|Ga0137405_1414691	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300015242\|Ga0137412_10572913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300016294\|Ga0182041_11546922	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300016294\|Ga0182041_12128732	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300017924\|Ga0187820_1298541	Not Available	530	Open in IMG/M
3300017961\|Ga0187778_10971699	Not Available	587	Open in IMG/M
3300017975\|Ga0187782_11314313	Not Available	567	Open in IMG/M
3300018058\|Ga0187766_10084049	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300018062\|Ga0187784_10104530	Not Available	2305	Open in IMG/M
3300018085\|Ga0187772_11244281	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300018086\|Ga0187769_10019161	All Organisms → cellular organisms → Bacteria	4517	Open in IMG/M
3300018086\|Ga0187769_11182981	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300020579\|Ga0210407_11252246	Not Available	556	Open in IMG/M
3300021168\|Ga0210406_10215854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1586	Open in IMG/M
3300021170\|Ga0210400_10089849	All Organisms → cellular organisms → Bacteria	2422	Open in IMG/M
3300021181\|Ga0210388_11814392	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300021402\|Ga0210385_10857332	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300021420\|Ga0210394_10086937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2700	Open in IMG/M
3300021479\|Ga0210410_11200915	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300021559\|Ga0210409_10038120	All Organisms → cellular organisms → Bacteria	4572	Open in IMG/M
3300021559\|Ga0210409_10684162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300021559\|Ga0210409_11489755	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300024284\|Ga0247671_1022841	Not Available	940	Open in IMG/M
3300025899\|Ga0207642_10760059	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300027174\|Ga0207948_1001125	All Organisms → cellular organisms → Bacteria	2844	Open in IMG/M
3300027330\|Ga0207777_1014207	All Organisms → cellular organisms → Bacteria → Acidobacteria	1610	Open in IMG/M
3300027651\|Ga0209217_1045717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1332	Open in IMG/M
3300027681\|Ga0208991_1156981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300027738\|Ga0208989_10195178	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300027787\|Ga0209074_10055090	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300027846\|Ga0209180_10630109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300027905\|Ga0209415_10022690	All Organisms → cellular organisms → Bacteria	9562	Open in IMG/M
3300027910\|Ga0209583_10179249	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300028381\|Ga0268264_10456559	All Organisms → cellular organisms → Bacteria → Acidobacteria	1239	Open in IMG/M
3300028759\|Ga0302224_10077143	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300028773\|Ga0302234_10168979	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300028879\|Ga0302229_10085885	All Organisms → cellular organisms → Bacteria → Acidobacteria	1505	Open in IMG/M
3300029636\|Ga0222749_10000578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22033	Open in IMG/M
3300029910\|Ga0311369_10027468	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6602	Open in IMG/M
3300030013\|Ga0302178_10244415	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300030520\|Ga0311372_12703859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300031057\|Ga0170834_108547189	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300031236\|Ga0302324_100223827	Not Available	2970	Open in IMG/M
3300031236\|Ga0302324_103381834	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300031572\|Ga0318515_10417469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300031679\|Ga0318561_10079577	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300031680\|Ga0318574_10168870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1249	Open in IMG/M
3300031680\|Ga0318574_10896304	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300031718\|Ga0307474_10339965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300031718\|Ga0307474_10611856	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300031719\|Ga0306917_11376422	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300031744\|Ga0306918_10894581	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300031754\|Ga0307475_10857239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300031768\|Ga0318509_10199161	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300031768\|Ga0318509_10247903	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300031769\|Ga0318526_10396962	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300031782\|Ga0318552_10101503	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300031833\|Ga0310917_10276830	All Organisms → cellular organisms → Bacteria → Acidobacteria	1132	Open in IMG/M
3300031879\|Ga0306919_11514516	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300031910\|Ga0306923_11639953	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300031942\|Ga0310916_10490471	All Organisms → cellular organisms → Bacteria → Acidobacteria	1046	Open in IMG/M
3300031954\|Ga0306926_10118357	All Organisms → cellular organisms → Bacteria	3263	Open in IMG/M
3300032051\|Ga0318532_10297649	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300032059\|Ga0318533_10154111	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300032059\|Ga0318533_10185555	All Organisms → cellular organisms → Bacteria → Acidobacteria	1484	Open in IMG/M
3300032068\|Ga0318553_10065029	All Organisms → cellular organisms → Bacteria	1817	Open in IMG/M
3300032174\|Ga0307470_10214777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300032515\|Ga0348332_10727452	Not Available	602	Open in IMG/M
3300032783\|Ga0335079_11665634	Not Available	625	Open in IMG/M
3300032828\|Ga0335080_10714909	All Organisms → cellular organisms → Bacteria → Acidobacteria	1043	Open in IMG/M
3300032829\|Ga0335070_11720589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300032829\|Ga0335070_12127853	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300032892\|Ga0335081_10439879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1662	Open in IMG/M
3300033134\|Ga0335073_11540098	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300033158\|Ga0335077_10311622	Not Available	1719	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.45%
Host-Associated	Host-Associated	4.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.27%
Aquatic	Environmental → Aquatic	8.18%
Plants	Host-Associated → Plants	4.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.09%
Peat	Environmental → Terrestrial → Peat	7.27%
Freshwater	Environmental → Aquatic → Freshwater	5.45%
Sediment	Environmental → Aquatic → Sediment	2.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.64%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.36%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.36%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.64%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101275801	3300000567	Peatlands Soil	VEVDEARVSDVKKEIDLATPREFLLRAGKKKFLRVVVE*
JGI12269J14319_100516732	3300001356	Peatlands Soil	LEIDGVRVDDVKREIDLSKPADFLLRAGKKKFLRLIVE*
JGI25613J43889_101411942	3300002907	Grasslands Soil	LIKQKAVEIDGVTIDDPRKDIDLSKPTEFLLRAGKKKFLRIVVE*
Ga0062387_1000758683	3300004091	Bog Forest Soil	EQGGVEIDGVRVEDVRKDIDLSKPSEFLLRVGKKKFLRIIIE*
Ga0062388_1029628552	3300004635	Bog Forest Soil	KQRGVEIDGVAAEDPRQDVELSQPREFLLRAGKKKFLRIIVE*
Ga0066677_108428481	3300005171	Soil	KQKGVEINETAVDDFRKELDLSRPAEFLIRAGKKKFLRLVVE*
Ga0070699_1010230931	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GGGIEINEQRVDDVRKVIDLSQPGEFLLRAGKKKFLRIIVE*
Ga0070730_100845331	3300005537	Surface Soil	VEIDGVRVDDPRKDIDLSKPAEFLLRAGKKKFLRIIIE*
Ga0066903_1018732162	3300005764	Tropical Forest Soil	KQKAVEIDGVIIEDPRKDIDLSKPAIFLVRAGKKRFLRVVVE*
Ga0070766_104615801	3300005921	Soil	EGVTIEDPRKDVDLGKPSEFLLRAGKKKFVRVVVE*
Ga0066788_100289963	3300005944	Soil	VEIDGTRVDDARRDMDLSKPAEFLLRAGKKKFLRVVVE*
Ga0075028_1005061951	3300006050	Watersheds	VKQRAVELDGEIVDDPSTVIDLSKPREFLLRSGKKKFVRVVLVEG*
Ga0075018_102672351	3300006172	Watersheds	IDGVRIDDPRKDIDLSKPVEFLLRAGKKKFVRIVVE*
Ga0070712_1016521941	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EIDGQRVNDFRKDVDLTGPADFLLRAGKKKFLRIVVE*
Ga0079222_101667011	3300006755	Agricultural Soil	QKGVEIDGSIVEDFRKEIDLSQPREFLLRAGKKKFLRLIVE*
Ga0099795_105964711	3300007788	Vadose Zone Soil	QGGVEINEQRVEDFRKDVDLSQAGEFLLRAGKKKFLRIIVE*
Ga0099830_102931341	3300009088	Vadose Zone Soil	GARADDPRKDIDLSKPADFLLRAGKKKFVRIVVE*
Ga0105247_104732671	3300009101	Switchgrass Rhizosphere	QGGVEINGQRVDNFRKDVDLTTSCEFLLRAGKKKFLRIVVE*
Ga0066709_1034743652	3300009137	Grasslands Soil	VELNETPVEDFRKELDLSKPAEFLIRAGKKKFLRLVVE*
Ga0116217_109822321	3300009700	Peatlands Soil	NGHRVDDVKHEIDLSKPGEFLLRAGKKKFLRIVVE*
Ga0126370_119808522	3300010358	Tropical Forest Soil	ERLIKQKAVEIDAVMIEDWRKDIDLSKPTNFLLRAGKKKFVRVVVE*
Ga0126377_101472963	3300010362	Tropical Forest Soil	LIKQGGVEINESRIDDFRKDIDFSKPSEFLLRAGKKKFLRIVVE*
Ga0126377_130680261	3300010362	Tropical Forest Soil	GGVEINEQRVDDFRKDVDLSQPAEFLLRAGKKKFLRLVVE*
Ga0137391_113540381	3300011270	Vadose Zone Soil	NEQRVDDFRKDIDLTQPQEFLLRAGKKKFLRIVVE*
Ga0137370_106166702	3300012285	Vadose Zone Soil	VELDGERVSEVNREVDLTRPRDFLLRAGKKKFLRIVVE*
Ga0137398_101091451	3300012683	Vadose Zone Soil	IDGVTIDDPRKDIDLSKPTEFLLRAGKKKFLRIVVE*
Ga0137398_102304521	3300012683	Vadose Zone Soil	KAVEIDGVTIDDPRKDIDLSKPTEFLLRAGKKKFLRIVVE*
Ga0137404_106331921	3300012929	Vadose Zone Soil	IDGVRIDDPRKDIDLSKPVEFLLRAGKKKFVRVVVE*
Ga0153915_119327641	3300012931	Freshwater Wetlands	IKQGGVELDGARVDDVRKEVDLTQPGAFLLRAGKKKFLRLVVE*
Ga0153915_126795421	3300012931	Freshwater Wetlands	GQRVDDVKREIDLSKPGEFLLRAGKKKFLRVVIE*
Ga0153916_109271001	3300012964	Freshwater Wetlands	VELDGARVDDVRKEVDLAQPGVFLLRAGKKKFLRLVVE*
Ga0163162_125094591	3300013306	Switchgrass Rhizosphere	KQGGVEINGRRVDNFRKDVDLTTSCEFLLRAGKKKFLRIVVE*
Ga0157375_112688032	3300013308	Miscanthus Rhizosphere	GVEIDGERVVDVKKELAFSAPVEFLLRAGKKKFIRVVVE*
Ga0120132_10093961	3300013832	Permafrost	AVEIDGQRIDDPRKEIDLSKPNNFLLRAGKKKFLRIVIA*
Ga0137414_10422081	3300015051	Vadose Zone Soil	DEARVDDPRRDIDLSKPAEFLLRAGKKKFLRVVVE*
Ga0137405_14146916	3300015053	Vadose Zone Soil	VEINETPVEDFRKELDLSKPAEFLIRAGKKKFLRLVVE*
Ga0137412_105729132	3300015242	Vadose Zone Soil	DEARVDDPRRDIDLSKPAEFLLRAGKKKFLRVIVE*
Ga0182041_115469222	3300016294	Soil	DGARVNDFRKEIDLTRTGEFLLRAGKKKFLRIVVQ
Ga0182041_121287321	3300016294	Soil	EAERPIKQRGVEINEACVEDARKEIDLSKPREFLLRAGKKRFVRVVVE
Ga0187820_12985412	3300017924	Freshwater Sediment	NGQRVDDFRRDIDLTQPIEFLLRAGKKKFLRIIVE
Ga0187778_109716992	3300017961	Tropical Peatland	VEIDGVRVDDVKREIDLSRPYQYLLRVGKKKFLRLVVG
Ga0187782_113143132	3300017975	Tropical Peatland	LIKLVGVEIDGVRVDDVKREIDLSKPGEYLVRAGKKKFLRLVVAESAR
Ga0187766_100840494	3300018058	Tropical Peatland	EIDGVRVDDVKREIDLSKPGEYLLRAGKKKFLRLVVA
Ga0187784_101045303	3300018062	Tropical Peatland	MACEGGPRPQNGVEIDGARVEDARSELDLSRAGSYLLRAGKKKFLRLVVE
Ga0187772_112442811	3300018085	Tropical Peatland	NGVEIDGARVEDARSELDLSRAGSYLLRAGKKKFLRLVVE
Ga0187769_100191611	3300018086	Tropical Peatland	IDGVRMDDVKRELDLSRPYQYLLRVGKKKFLRLTVE
Ga0187769_111829812	3300018086	Tropical Peatland	VEIDGARVEDVRGELDLSRAGSYLLRAGKKKFLRL
Ga0210407_112522461	3300020579	Soil	LVKQGAVELNESRIDDPRKDIDLSKPTQLLLRAGKKKFLRLIVE
Ga0210406_102158541	3300021168	Soil	KSVEIDGVTIDDPRKDIDLSKSSEFLLRAGKKKFVRVVVE
Ga0210400_100898491	3300021170	Soil	QGAVELNESRVDDPRADLDLTKPVQFLLRAGKKKFLRLIVE
Ga0210388_118143921	3300021181	Soil	EIDGARVSDVKFDLDLSRPSAFLLRAGKKKFLRIVVE
Ga0210385_108573321	3300021402	Soil	QGGVEIDGARVDDARKEIDMSKPREFLLRVGKKKFVRVVMA
Ga0210394_100869371	3300021420	Soil	ELDGARVSDVKHEVDLTKPREILLRAGKKKFLRIRVE
Ga0210410_112009151	3300021479	Soil	HKGVEIDGLLAEDPRQDIDLSQPREFLLRVGKKKFVRIIVE
Ga0210409_100381206	3300021559	Soil	DGQRIDDPRKEVDLSKGRNFLLRAGKKKFVRLVVE
Ga0210409_106841623	3300021559	Soil	VELNESRVDDPRADLDLTKPAQFLLRAGKKKFLRLIVE
Ga0210409_114897552	3300021559	Soil	QGGVEIDGARVDDPRRDVDLGKSREFLLRVGKKKFFRIVVE
Ga0247671_10228412	3300024284	Soil	VEINEQRVDDFRREVDLTQADEFLLRAGKKKFLRVVVE
Ga0207642_107600592	3300025899	Miscanthus Rhizosphere	VEIDGQRVDDFRKDVDLTGPADFLLRAGKKKFLRIVVE
Ga0207948_10011251	3300027174	Forest Soil	DGVPVDDPRKDFDLRNAGEFLLRAGKKKFLRIVVE
Ga0207777_10142071	3300027330	Tropical Forest Soil	ERLIKQRGVEIDETCVEDVRKEIDLSKPGEFLLRAGKKKFLRVVVE
Ga0209217_10457171	3300027651	Forest Soil	IKQKAVEIDGVTIEDPRKEIDLSNPCEFLLRAGKKKFLRIVVD
Ga0208991_11569811	3300027681	Forest Soil	VEIDGERVSDVKMEVDLARPRELLLRAGKKKFLRLVIE
Ga0208989_101951781	3300027738	Forest Soil	GVEIDGERVSDVKMEVDLARPREYLLRAGKKKFLRLVIE
Ga0209074_100550902	3300027787	Agricultural Soil	QKGVEIDGSIVEDFRKEIDLSQPREFLLRAGKKKFLRLIVE
Ga0209180_106301091	3300027846	Vadose Zone Soil	DGARVDDFRRDVDLSKPVEFLLRAGKKKFLRIVVE
Ga0209415_1002269011	3300027905	Peatlands Soil	LEIDGVRVDDVKREIDLSKPADFLLRAGKKKFLRLIVE
Ga0209583_101792491	3300027910	Watersheds	QKGVEINEAPVEDFRKELDLTQPGEYLIRAGKKKFLRVVVE
Ga0268264_104565591	3300028381	Switchgrass Rhizosphere	GVEINEQRVDDFRKDVDLTEGCEFLLRAGKKKFLRIVVE
Ga0302224_100771432	3300028759	Palsa	DGVRVSDVKKEMDVSQPGGFLLRAGKKKFLRVVVE
Ga0302234_101689791	3300028773	Palsa	VEIDGVPAEDPRQEIELREPREFLLRAGKKRFLRIVVE
Ga0302229_100858853	3300028879	Palsa	GGVEVDGVRVSDVKKEMDVSQPGGFLLRAGKKKFLRVVVE
Ga0222749_100005781	3300029636	Soil	MKQGGVEIEGRREDDVKREIDLSKPGEFLLRAGKKKFLRIVVE
Ga0311369_100274687	3300029910	Palsa	VEVDGVRVSDVKKEMDVSQPGGFLLRAGKKKFLRVVVE
Ga0302178_102444151	3300030013	Palsa	LIKQGGVEIDGVPAEDPRQEIELREPREFLLRAGKKRFLRIVVE
Ga0311372_127038591	3300030520	Palsa	GVELDGQRVEDVKRDIELSKPAEFLLRAGKKKFLRIVVE
Ga0170834_1085471891	3300031057	Forest Soil	IDGARVDDARKEIDMSRPREFLLRAGKKKFVRVVVA
Ga0302324_1002238271	3300031236	Palsa	VEIAGQRVDDVKRDVDLSKPGEFLLRAGKKKFLRIVVE
Ga0302324_1033818342	3300031236	Palsa	QGGVEVGGTRVDDVQKQIDLSKPSEFLLRAGKKKFVRVVVE
Ga0318515_104174692	3300031572	Soil	IDGLAVDDPRKEMDLTKPYEFLLRAGKKKFVRIIVE
Ga0318561_100795773	3300031679	Soil	DGACVEDARMEIDLSKPREFLLRAGKKKFVRVVVE
Ga0318574_101688701	3300031680	Soil	KQKAVEIDGLAVDDPRKEMDLTKPYEFLLRAGKKKFVRIIVE
Ga0318574_108963041	3300031680	Soil	VEINEACVEDARKEIDLSKPREFLLRVGKKKFVRVVVE
Ga0307474_103399651	3300031718	Hardwood Forest Soil	KQKAVEIDGVTIDDSRKDIDLSKPCEFLLRAGKKKFVRVIIE
Ga0307474_106118562	3300031718	Hardwood Forest Soil	LVKQKGVEIDGVLAEDPRQDIDLSQPREFLLRAGKKKFLRIIVE
Ga0306917_113764222	3300031719	Soil	GGAEIDGQRVEDFRKDVDLTQPKEFLLRAGKKKFLRVVVE
Ga0306918_108945812	3300031744	Soil	KQRGVEIDETCVEDVRKEIDLSKPGEFLLRAGKKKFLRVVVE
Ga0307475_108572391	3300031754	Hardwood Forest Soil	EINGERADVKKEVDLSKSGEFLVRAGKKKFMRIVVE
Ga0318509_101991611	3300031768	Soil	EINEACVEDPRTEIDLSKPAEFLLRAGKKKFVRVVVE
Ga0318509_102479031	3300031768	Soil	INEACVEDARKEIDLSEPREFLLRVGKKKFVRVVVE
Ga0318526_103969621	3300031769	Soil	IDSERVDDFRKDIDLTQSGEFLLRAGKKKFLRVVVE
Ga0318552_101015031	3300031782	Soil	RLIKQRGVEINEACVEDARKEIDLSEPREFLLRAGKKKFVRVVVE
Ga0310917_102768301	3300031833	Soil	ERLIKQRGVEIDEICVEDPRKEIDLSKPGQFLLRAGKKKFLRMIIE
Ga0306919_115145161	3300031879	Soil	QGGVEIDSVSVEDPRKVVDLSKSREFLLRAGKKKFVRVVVD
Ga0306923_116399531	3300031910	Soil	HGGVEIDQSRVDDPRMDIDLSRPSQLLVRAGKKKFLRVIVE
Ga0310916_104904712	3300031942	Soil	NEACVEDARKEIDLSEPGEFLLRAGKKKFVRVVVE
Ga0306926_101183574	3300031954	Soil	AERLVKQRGVEIDETCVEDVRKEIDLSKPGEFLLRAGKKKFLRVVVE
Ga0318532_102976492	3300032051	Soil	KQGGAEIDGQRVEDFRKDVDLTQPKEFLLRAGKKKFLRVVVE
Ga0318533_101541113	3300032059	Soil	VEIDGACVEDARMEIDLSKPREFLLRAGKKKFVRVVVE
Ga0318533_101855551	3300032059	Soil	LVKQRGVEIDETCVEDVRKEIDLSKPGEFLLRAGKKKFLRVVVE
Ga0318553_100650293	3300032068	Soil	KQRGVEINEACVEDARKEIDLSEPGEFLLRAGKKKFVRVVVE
Ga0307470_102147772	3300032174	Hardwood Forest Soil	GLEIDGARVDDPRKDVDLSKPGEFLLRAGKKKFVRVIVG
Ga0348332_107274521	3300032515	Plant Litter	DGQRVVDVTREIDLSTAGEFLIRAGKKKFLRVIVE
Ga0335079_116656341	3300032783	Soil	AGQRIDDVKREVDLSRPSEFLLRAGKKKFLRVVVE
Ga0335080_107149091	3300032828	Soil	IDGTTVEDPRKEIDLDKPQEFLLRAGKKKFLRVIVE
Ga0335070_117205892	3300032829	Soil	KQRGVEIDEACVEDPRKEIDLSNPVQFLLRAGKKKFVRVVVE
Ga0335070_121278532	3300032829	Soil	KGIELNESPVEDFRKELDLSQPAEYLIRAGKKKFLRLIVE
Ga0335081_104398793	3300032892	Soil	GVEIDEVCVEDPREKIDLSHPMQFLLRAGKKKFVRVVVE
Ga0335073_115400982	3300033134	Soil	KQGGVELDEVRVDDVRKDVDLSVPKEFLLRAGKKKFVKIVVE
Ga0335077_103116223	3300033158	Soil	GGVEIEGARVDDARSELDLSRPGSYLLRAGKKKFLRLVIE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087698

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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