Metagenome / Metatranscriptome Family F087693

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F087693
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	107 residues
Representative Sequence	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALA
Number of Associated Samples	88
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.66 %
% of genes near scaffold ends (potentially truncated)	99.09 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.364 % of family members)
Environment Ontology (ENVO)	Unclassified (69.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (47.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.07% β-sheet: 2.80% Coil/Unstructured: 41.12%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF06832	BiPBP_C	5.45
PF02366	PMT	2.73

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	5.45

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.27 %
Unclassified	root	N/A	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101615293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10080464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300000955\|JGI1027J12803_100117967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1002	Open in IMG/M
3300005167\|Ga0066672_10551518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
3300005363\|Ga0008090_10061521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	910	Open in IMG/M
3300005363\|Ga0008090_10224663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300005406\|Ga0070703_10262838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	705	Open in IMG/M
3300005445\|Ga0070708_100264384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1617	Open in IMG/M
3300005546\|Ga0070696_102026178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300005764\|Ga0066903_105658798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300006172\|Ga0075018_10512608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300006871\|Ga0075434_102099787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300006903\|Ga0075426_11169307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300006939\|Ga0081244_1489595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300010043\|Ga0126380_11156017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300010046\|Ga0126384_11745628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300010047\|Ga0126382_11371999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300010359\|Ga0126376_12460781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300010360\|Ga0126372_13055739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300010361\|Ga0126378_10112505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2711	Open in IMG/M
3300010362\|Ga0126377_11701609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300010366\|Ga0126379_13456528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300010398\|Ga0126383_12257079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300012349\|Ga0137387_11198476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300012971\|Ga0126369_11182616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300012971\|Ga0126369_12840468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300016270\|Ga0182036_10791039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300016294\|Ga0182041_11666422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300016319\|Ga0182033_11536238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300016341\|Ga0182035_10801700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300016357\|Ga0182032_10435337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1067	Open in IMG/M
3300016357\|Ga0182032_10763518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M
3300016357\|Ga0182032_11223901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300016371\|Ga0182034_10666107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	882	Open in IMG/M
3300016371\|Ga0182034_11052161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300016387\|Ga0182040_10967782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300016387\|Ga0182040_11644931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300016422\|Ga0182039_10857585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300016422\|Ga0182039_12020046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300021560\|Ga0126371_13095957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300025910\|Ga0207684_10960822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300025922\|Ga0207646_10606704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	982	Open in IMG/M
3300026320\|Ga0209131_1414524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300027655\|Ga0209388_1095298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300028771\|Ga0307320_10299444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300031543\|Ga0318516_10214585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1112	Open in IMG/M
3300031545\|Ga0318541_10285312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300031546\|Ga0318538_10213298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1032	Open in IMG/M
3300031549\|Ga0318571_10301582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300031549\|Ga0318571_10302806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300031561\|Ga0318528_10540606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300031564\|Ga0318573_10177252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1125	Open in IMG/M
3300031564\|Ga0318573_10664487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300031572\|Ga0318515_10109048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1457	Open in IMG/M
3300031573\|Ga0310915_10055475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2571	Open in IMG/M
3300031668\|Ga0318542_10290049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	836	Open in IMG/M
3300031679\|Ga0318561_10033716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2489	Open in IMG/M
3300031713\|Ga0318496_10399609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300031719\|Ga0306917_10383666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1095	Open in IMG/M
3300031719\|Ga0306917_10391198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1084	Open in IMG/M
3300031719\|Ga0306917_10645138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300031720\|Ga0307469_11191093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300031744\|Ga0306918_10817476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300031748\|Ga0318492_10470007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300031769\|Ga0318526_10425490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300031771\|Ga0318546_10379090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	986	Open in IMG/M
3300031771\|Ga0318546_10455911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	895	Open in IMG/M
3300031781\|Ga0318547_10487738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300031782\|Ga0318552_10660151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300031797\|Ga0318550_10191135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	989	Open in IMG/M
3300031798\|Ga0318523_10022937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2742	Open in IMG/M
3300031805\|Ga0318497_10042379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2320	Open in IMG/M
3300031805\|Ga0318497_10248966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300031819\|Ga0318568_10386636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	871	Open in IMG/M
3300031832\|Ga0318499_10156484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	888	Open in IMG/M
3300031835\|Ga0318517_10159751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300031859\|Ga0318527_10029924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2015	Open in IMG/M
3300031879\|Ga0306919_10554670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	886	Open in IMG/M
3300031879\|Ga0306919_10969876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300031893\|Ga0318536_10332595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300031893\|Ga0318536_10352805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300031894\|Ga0318522_10239088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300031894\|Ga0318522_10377826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300031897\|Ga0318520_10512088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300031910\|Ga0306923_11391934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300031910\|Ga0306923_12469095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300031941\|Ga0310912_10328158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1186	Open in IMG/M
3300031941\|Ga0310912_10668102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300031941\|Ga0310912_10839743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300031942\|Ga0310916_11409217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300031946\|Ga0310910_10063834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2637	Open in IMG/M
3300031947\|Ga0310909_10718066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	829	Open in IMG/M
3300031954\|Ga0306926_10981426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1006	Open in IMG/M
3300032010\|Ga0318569_10155198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1054	Open in IMG/M
3300032025\|Ga0318507_10259358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300032043\|Ga0318556_10238513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300032044\|Ga0318558_10072324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1570	Open in IMG/M
3300032059\|Ga0318533_10072712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2331	Open in IMG/M
3300032060\|Ga0318505_10308802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300032067\|Ga0318524_10277804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	864	Open in IMG/M
3300032068\|Ga0318553_10369052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300032068\|Ga0318553_10629411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300032068\|Ga0318553_10755610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300032076\|Ga0306924_11114104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859	Open in IMG/M
3300032076\|Ga0306924_12606080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300032090\|Ga0318518_10022096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2818	Open in IMG/M
3300032261\|Ga0306920_100606945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1618	Open in IMG/M
3300033289\|Ga0310914_10472792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1134	Open in IMG/M
3300033290\|Ga0318519_10681850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.18%
Host-Associated	Host-Associated	1.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.27%
Plants	Host-Associated → Plants	1.82%
Aquatic	Environmental → Aquatic	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Sediment	Environmental → Aquatic → Sediment	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.82%
Loam	Environmental → Terrestrial → Soil → Loam	5.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.64%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.73%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006939	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1016152932	3300000364	Soil	VSVSGPLKPASADRWASRLHWVRANVAWSFALFARKPKFAGPPLWRASLRLAVGTVVAVAIIAATMIVVDARAVTAAQRAPVWLAEIFDHITE
AF_2010_repII_A001DRAFT_100804641	3300000793	Forest Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATSAAVGVAIVAVTMIVIDAPAAIAAQRTPVWLSEIFDHITELG
JGI1027J12803_1001179671	3300000955	Soil	VSVSGPLKQASAARPHSRLHWVCANVVWAFALFARKPKFSRTPRWRVSLRLAAGAAMGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITEFGKSVWFLVPIALALAAIAL
Ga0066672_105515182	3300005167	Soil	VSVSGPLKQASAARPHSRLHWVCANVVWAFALFARKPKFSRTPRWRVSLRLAAGVAMGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITEFGKSVWFLVPI
Ga0008090_100615212	3300005363	Tropical Rainforest Soil	MSVSGPLKQASADRPASRLHWVRANVAWSFALFARKPKFAGTPLWRAPRRLAAGTLVAVAMIAATMIVLDALAVTAAQRAPAWLPEIFDHITEFGKSVWFLVPIALVLATM
Ga0008090_102246631	3300005363	Tropical Rainforest Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATSAVVGIAIVAVTMVVIDAPAAIAAQRTPVWLSEIFDHITELGKSIWFLVPIALALAAIALLASPALP
Ga0070703_102628381	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWHASLRLATGAAVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITEFGKS
Ga0070708_1002643842	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSVSGPLKQASAARPHSRLHWVCANVVWALALFARKPKFSRTPRWRASLRLAAGAAVGVAIVAVTMIVLDAPAVTAAQRAPVWLSEIFDHITEFGK
Ga0070696_1020261782	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSVSGPLKQASADRPASRLLHWLRANVAWSFALFARKPKFAGTPIWRAPLRLAAGTVAAIAIVAATMIVLDAPAVTAVQRAPAWLPEIFDHITEFGK
Ga0066903_1056587982	3300005764	Tropical Forest Soil	VSVSGPLKPASADRPASRLHWVHANVAWSFALFARKPKFAGPPLWRASLRLAVGTVVAVAIIAATMIVVDAPAVTAAQRAPVWLPEIFDHITEFGKSFWFLVPIALLLAAMALLASPALPRMSQRVLAAIAV
Ga0075018_105126081	3300006172	Watersheds	VSVSGPLKPALAERPHARLHWVCANVVWALALFARKPKFSRTPRWRVSLRLATGAAVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRMSQR
Ga0075434_1020997871	3300006871	Populus Rhizosphere	VSVSGPLKQASAERPHSRLHWVCANVVWAFALFARKPKFSRTPRWRVSLRLAAGVAMGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITEFGKSVWFLVPIAL
Ga0075426_111693071	3300006903	Populus Rhizosphere	VSGPLKQASAERPHSRLHWVCANVVWAFALFARKPKFSRTPRWRVSLRLAAGVAMGVAIVAVTMIVVDAPAVTVAQRAPVWLSEIFDHITEFG
Ga0081244_14895951	3300006939	Tropical Rainforest Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATNAVVGIAIVAVTMIVIDAPAAIAAQRTPVWLSEIFDHITELGK
Ga0126380_111560172	3300010043	Tropical Forest Soil	VSVTGPLKQASADRPASRLHWVRANVAWSFTLFARKPKFAGPPLWRASLRLAVGTVVAVAIIAATMIVVDAPAVTAAQRAPVWLAEIFDHITEF
Ga0126384_117456281	3300010046	Tropical Forest Soil	MSVSGPLKPASADRPASRLHWVRANVAWSFALFARKPKFAGPPLWRASLRLAVGTVVAVAIIAATMIVVDAPAVTAAQRAPVWLAEIFDHITEFGKSFWFLVPIALLLAAMALLASPALPRMSQ
Ga0126382_113719991	3300010047	Tropical Forest Soil	MSVSGPLKPASADRPASRLHWVRANVAWSFALFARKPKFAGPPLWRASLRLAVGTVVAVAIIAATMVVVDAPAVTAAQRAPVWLAEIFDHITEFGK
Ga0126373_107046662	3300010048	Tropical Forest Soil	VCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVVVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALALA
Ga0126376_124607811	3300010359	Tropical Forest Soil	MSVSGPLKPASAARPDSRLHWVCANVAWAFALFARKPKFSQTPRWRASPRLATGAVVGVTIVAVTMIVVDAPAATAAQHAPVWLSEIFDHITELGKSVWFLVPIALALA
Ga0126372_130557391	3300010360	Tropical Forest Soil	VSVSGPLKQASAERPDSRFHWVRANVAWAFALFARKPKLTGTPRWRASLRLAAGAVVGIAIIAAAMIVIDAPAVTAAQRAPVWLSEIF
Ga0126378_101125053	3300010361	Tropical Forest Soil	MSVSGPLKPASADRPASRLHWVRANVAWSFALFARKPKFAGPPLWRASLRLAVGTVVAVAIIAATMVVVDAPAVTAAQRAPVWLAEIFDHITEFGKSFWFLVPIALL
Ga0126377_117016091	3300010362	Tropical Forest Soil	VSVSGPLKPSSAARLDSRLHWVCANVAWAFALFARKPKFTGTPRWRASLRLASGAVVGVAIVAVTMIVIDAPAATAAQRAPMWLSEIFDHITELGKSVWFLM
Ga0126379_134565282	3300010366	Tropical Forest Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVVVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALALAAIALLASP
Ga0126383_122570791	3300010398	Tropical Forest Soil	MSVSGPLKPASAARPDSRLHWVCANVAWAFALFARKPKFSQTPRWRASPRLATGAVVGVTIVAVTMIVVDAPAATAAQHAPVWLSEIFDHITELGKSVWFLVPIALALAA
Ga0137387_111984762	3300012349	Vadose Zone Soil	MSVSGPLKQASADRPASRLHWLRANVAWSFALFARKPKFAGTPIWRAPLRLAAGTVAAIAIVAATMIVLDAPAVTAAQRAPVWLPEIFDHITEFGKSVWFLVPIALALATIALLTSPALPRMSQRVLAAIAVR
Ga0126369_111826161	3300012971	Tropical Forest Soil	MSVSGPLKQASADRPASRLHWVRANVAWSFALFARKPKFAGTPLWRAPRRLAAGTLVAVAMIAATMIVLDAPAVTAAQRAPAWLPEIFDHI
Ga0126369_128404681	3300012971	Tropical Forest Soil	VSVSGPLKQTSAERPDSRFHWVRANVAWAFALFARKPKFTGTPRWRASLRLATGAVVGIAIIAATMIVVDAPAARAAQHAPVWLSEIFDHITEFGKAVWFLVPIALALAAIALLASPVLPRMSQRVLAAL
Ga0182036_107910391	3300016270	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITELGKSVWFL
Ga0182041_116664222	3300016294	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITELGKSVWF
Ga0182033_115362381	3300016319	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGTVVGVAIVAVTMIVIDAPAATAAQHGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRMSQRVLAA
Ga0182035_108017001	3300016341	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGTVVGVAIVAVTMIVIDAPAATAAQHGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRM
Ga0182032_104353371	3300016357	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGAAVGVAIVAVTMIVLDAPAATAAQRAPVWLSEIFDHITEFGKSVWFL
Ga0182032_107635181	3300016357	Soil	MSVSGPLKRASADRPASRLHWVRANVAWSFALFARKPKFAGTPLWRAPRRLAAGTLAVVAMIAATMIVLDAPAVTAAQRAPAWLPEIFDHIT
Ga0182032_112239012	3300016357	Soil	VSVSDPLKPASAARLDSRLHWVCANVAWAFALFVRKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIAIDAPAATAAQRAPVWLSEIFDHITELG
Ga0182034_106661072	3300016371	Soil	VSVSGPLKQASAALPHSRLHWVCANVAWAFALFARKPKFSRSPRWRASLRLATGTAVGVAIVTVTMIVVDAPAATAAQRGPVWLSEIFDHITEFGKSVWFLVPIALALAAIAL
Ga0182034_110521611	3300016371	Soil	VSVSDPLKPASAARLDSRLHWVCANVAWAFALFVRKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIAIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALA
Ga0182040_109677821	3300016387	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITELGKSVWFLTPIAV
Ga0182040_116449312	3300016387	Soil	VSVSDPLKPASAARLDSRLHWVCANVAWAFALFVRKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIAIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLV
Ga0182039_108575851	3300016422	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITELGKSVWFLTPIAL
Ga0182039_120200461	3300016422	Soil	VSVSDPLKPASAARLDSRLHWVCANVAWAFALFVRKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIAIDAPAATAAQRAPVWLSEIFDHITELGKSVWFL
Ga0126371_130959572	3300021560	Tropical Forest Soil	MSVSSPLKQASADRPASRLHWVRANVAWSFALFARKPKFAGTPLWRAPRRLAAGTLVAVAMIAATMIVLDAPAVTAAQRAPAWLPEIFDHITEFGKSVWFLVPIALVLATMALLGS
Ga0207684_109608222	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSVSGPLKQASAARPHSRLHWVCANVVWAFALFARKPKFSRTPRWRVSLRLAAGAAMGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITEFGK
Ga0207646_106067042	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSVSGPLKQASAERPHSRLHWVCANVVWAFALFARKPKFSRTPRWRVSLRLAAGVAMGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRMS
Ga0209131_14145241	3300026320	Grasslands Soil	VSVSGPLKPALAARPHARLHWVCANVVWALALFARKPKFSRTPRWRVSLRLATGAAVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLA
Ga0209388_10952981	3300027655	Vadose Zone Soil	VSVSGPLKPALAARPHARLHWVCANVVWALALFARKPKFSRTPRWRVSLRLATGAAVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLAS
Ga0307320_102994442	3300028771	Soil	MSVSGPLKQAAPERRIARLHWARANVAWAFALFGRKPKFAGTPVWRAQLRLAVGAVGGVAIIAATMIVLDAPAVTAAQRTPEWLARVFDHVTESGKSFWFLVPIALALATIALLASPALPRMSQRVLAALAVRLGFL
Ga0318516_102145852	3300031543	Soil	VSVSGPLKQASAALPHSRLHWVCANVAWAFALFARKPKFSRSPRWRASLRLATGTAVGVAIVAVTMIVVDAPAATAAQRGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRMSQRVLAALAVRL
Ga0318541_102853121	3300031545	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITELGKSVWFLT
Ga0318538_102132981	3300031546	Soil	VSVSGPLKQASAALPHSRLHWVCANVAWAFALFARKPKFSRSPRWRASLRLATGTAVGVAIVTVTMIVVDAPAATAAQRGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRMSQRVLAA
Ga0318571_103015822	3300031549	Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALALAAIALLASPA
Ga0318571_103028061	3300031549	Soil	VSVSRPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSEIFDQITEFG
Ga0318528_105406061	3300031561	Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITE
Ga0318573_101772522	3300031564	Soil	VSVSRPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSEIFDQITEFGK
Ga0318573_106644871	3300031564	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLATGAVGGVAIVAVTMIVLDAPAVTAAQRAPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRM
Ga0318515_101090481	3300031572	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAALRAPVWLSEIFDHIT
Ga0310915_100554751	3300031573	Soil	VSVSGPLKPASAARLDSRLHWVCANVAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALALAAIALLASPA
Ga0318542_102900492	3300031668	Soil	VSVSRPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSEIFDQITEFGKSVWFLLPIALALAAIAVLAS
Ga0318561_100337161	3300031679	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITELGKSVWFLTPIALA
Ga0318496_103996092	3300031713	Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIA
Ga0306917_103836662	3300031719	Soil	VSVSDPLKPASAARLDSRLHWVCANVAWAFALFVRKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIAIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALALAAIALLASPALPRMSQRVLAAL
Ga0306917_103911982	3300031719	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGTVVGVAIVAVTMIVIDAPAATAAQHGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPA
Ga0306917_106451382	3300031719	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSE
Ga0307469_111910931	3300031720	Hardwood Forest Soil	VSVSGPLKQASAARPHSRLHWVCANVVWAFALFARKPKFSRTPRWRVSLRLAAGVAMGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITEFGKSVWFLVPIALALAAIALL
Ga0306918_108174761	3300031744	Soil	VSVSGPLKQASAERPASRLHWVCANVAWAFVLFARKPKFSGTPRWRASLRLATGAVVGVAIVAVTMIAVDAPAATAAQRAPVWFSEIFD
Ga0318492_104700071	3300031748	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITELGKSVWFLTPIALALAAIAL
Ga0318526_104254902	3300031769	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLATGAVGGVAIVAVTMIVLDAPAVTAAQRAPVWL
Ga0318546_103790901	3300031771	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGTVVGVAIVAVTMIVIDAPAATAAQHGPVWLSE
Ga0318546_104559112	3300031771	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSEIFDQITEFGKSVWFLLPIALALAAIAVL
Ga0318547_104877382	3300031781	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSEIFDQI
Ga0318552_106601511	3300031782	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGTVVGVAIVAVTMIVIDAPAATAAQHGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRMS
Ga0318550_101911352	3300031797	Soil	VSVSGPLKQASAALPHSRLHWVCANVAWAFALFARKPKFSRSPRWRASLRLATGTAVGVAIVTVTMIVVDAPAATAAQRGPVWLSEIFDHITEFGKSVWFLVPI
Ga0318523_100229371	3300031798	Soil	VSVSGPLKQASAALPHSRLHWVCANVAWAFALFARKPKFSRSPRWRASLRLATGTAVGVAIVTVTMIVVDAPAATAAQRGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRMS
Ga0318497_100423791	3300031805	Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALA
Ga0318497_102489662	3300031805	Soil	VSVSDPLKPASAARLDSRLHWVCANVAWAFALFVRKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIAIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALALAAIALLA
Ga0318568_103866361	3300031819	Soil	VSVSDPLKPASAARLDSRLHWVCANVAWAFALFVRKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIAIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALALAAIALLASPA
Ga0318499_101564841	3300031832	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSEIFDQITEFGKSVWFLVPIALALAAI
Ga0318517_101597512	3300031835	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGTVVGVAIVAVTMIVIDAPAATAAQHGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRMSQR
Ga0318527_100299242	3300031859	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITELGKSVWFLTPIAASATA
Ga0306919_105546702	3300031879	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGTVVGVAIVAVTMIVIDAPAATAAQHGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRMSQRV
Ga0306919_109698761	3300031879	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITELGKSVWFLTPIAVALAAIALLA
Ga0318536_103325951	3300031893	Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKC
Ga0318536_103528052	3300031893	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSESFDQITEFGKSVWFLVPIALALAAIALLASPALPRMSQRVLA
Ga0318522_102390881	3300031894	Soil	VSVSRPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSESFDQITEFGKSVWF
Ga0318522_103778261	3300031894	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHI
Ga0318520_105120882	3300031897	Soil	VSVSGPLKQASAALPHSRLHWVCANVAWAFALFARKPKFSRSPRWRASLRLATGTAVGVAIVTVTMIVVDAPAATAAQRGPVWLSEIFDHITEFGKSVWFVVP
Ga0306923_113919341	3300031910	Soil	VSVSGPLKPASADRPASRLHWVHANVAWSFALFARKPKFAGPPLWRASLRLAVGTVVAVAIIAATMIVVDAPAVTAAQRAPVWL
Ga0306923_124690951	3300031910	Soil	VSVSGPLKQASAERPASRLHWVCANVAWAFVLFARKPKFSGTPRWRASLRLATGAVVGVAIVAVTMIAVDAPAATAAQRAPVWFSEIFDHITEFGKSVWFLVPIALVLAAIALLASPALPRMSQ
Ga0310912_103281582	3300031941	Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALALAAIA
Ga0310912_106681022	3300031941	Soil	VSVSRPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSEIFDQITEFGKSVWFLVPIALALAAIAVLA
Ga0310912_108397431	3300031941	Soil	VSVSDPLKPASAARLDSRLHWVCANVAWAFALFVRKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIAIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALALAAIALLASP
Ga0310916_114092171	3300031942	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLATGAVGGVAIVAVTMIVLDAPAVTAAQRAPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLA
Ga0310910_100638341	3300031946	Soil	VSVSGPLKQASAALPHSRLHWVCANVAWAFALFARKPKFSRSPRWRASLRLATGTAVGVAIVAVTMIVVDAPAATAAQRGPVWLSEIFDHITEFGKSVWFLVPI
Ga0310909_107180661	3300031947	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSEIFDQITEFGKSVWFLVPIALALAAIAVLASP
Ga0306926_109814262	3300031954	Soil	VSVSRPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSE
Ga0318569_101551981	3300032010	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLATGAVGGVAIVAVTMIVLDAPAVTAAQRAPVWLSEIFDHITEFGKSVWFLVPI
Ga0318507_102593581	3300032025	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSEIFDQITEF
Ga0318556_102385132	3300032043	Soil	VSVSRPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSEIFDQIT
Ga0318558_100723241	3300032044	Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIAR
Ga0318533_100727121	3300032059	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSEIFDHITELGKSVWFLTPIALALAAIALLASPALRHAW
Ga0318505_103088021	3300032060	Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIARNK
Ga0318524_102778042	3300032067	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLASGAAVGVAIVAVTMILLDAPAVTAAQRAPVWLSESFDQIT
Ga0318553_103690522	3300032068	Soil	VSVSGPLKPASAARHDSRLHWVCANVAWALALFARKPKFTGTPRWRASLRLATGAVGGVAIVAVTMIVLDAPAVTAAQRAPVWLSEIFDHITEFGKSVWFLVPIALA
Ga0318553_106294112	3300032068	Soil	VSVSGPLKPASAARLDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIVIDAPAATAAQRAPVWLSEIFDHITELGKS
Ga0318553_107556101	3300032068	Soil	VSVSDPLKPASAARLDSRLHWVCANVAWAFALFVRKPKFSRTPRWRASPRLATGAVVGVAIVAVTMIAIDAPAATAAQRAPVWLSEIFDHITELGKSVWFLVPIALALAAIALLASPALPRMSQ
Ga0306924_111141041	3300032076	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGTVVGVAIVAVTMIVIDAPAATAAQHGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRMSQRVL
Ga0306924_126060802	3300032076	Soil	VSVSGPLKPASAARPDSRLHWVCANVAWAFALFARKPKFSQTPRWRASFRLATGAVVGVAIVAATMIVIDAPAAIAAQHTPVWLSEIFDHITELGKSIWFL
Ga0318518_100220963	3300032090	Soil	VSVSGPLKQASAALPHSRLHWVCANVAWAFALFARKPKFSRSPRWRASLRLATGTAVGVAIVAVTMIVVDAPAATAAQRGPVWLSEIFDHITEFGKSVWFLVPIALALAAIALLASPALPRM
Ga0306920_1006069451	3300032261	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGTVVGVAIVAVTMIVIDAPAATAAQHGPVWLSEIFDHITEFGKSV
Ga0310914_104727921	3300033289	Soil	VSVSGPLKQASAARPHSRLHWVCANVAWAFALFARKPKFSRTPRWRASLRLATGTVVGVAIVAVTMIVIDAPAATAAQHGPVWLSEIFDHITEFGKSVWFLVPIAL
Ga0318519_106818501	3300033290	Soil	VSVSGPLKPASAARVDSRLHWVCANVAWAFALFARKPKFSRTPRWRASPRLATRAVVGVAIVAVTMIVVDAPAATAAQRAPVWLSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087693

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences