Metagenome / Metatranscriptome Family F087661

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087661
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	79 residues
Representative Sequence	MKTKRISGVIIAGRPAHLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYG
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.55 %
% of genes near scaffold ends (potentially truncated)	74.55 %
% of genes from short scaffolds (< 2000 bps)	88.18 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.364 % of family members)
Environment Ontology (ENVO)	Unclassified (37.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.71% β-sheet: 2.15% Coil/Unstructured: 59.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01436	NHL	6.36
PF01345	DUF11	2.73
PF01593	Amino_oxidase	0.91
PF12951	PATR	0.91
PF14552	Tautomerase_2	0.91
PF13884	Peptidase_S74	0.91
PF07638	Sigma70_ECF	0.91
PF00069	Pkinase	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.64
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.91

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	86.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	86.36 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.82 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	85.45 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	85.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.91 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	85.45 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.91 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	85.45 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.91 %
unclassified Cupriavidus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	85.45 %
Cupriavidus sp. HMR-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. HMR-1	0.91 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
Unclassified	root	N/A	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102H8CLG	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
2170459005\|F1BAP7Q02HHKQE	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300000956\|JGI10216J12902_109313307	Not Available	1107	Open in IMG/M
3300004480\|Ga0062592_102670045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300005174\|Ga0066680_10046944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2521	Open in IMG/M
3300005180\|Ga0066685_10004966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6796	Open in IMG/M
3300005184\|Ga0066671_10659754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. HMR-1	678	Open in IMG/M
3300005186\|Ga0066676_10695815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300005331\|Ga0070670_100327606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1343	Open in IMG/M
3300005339\|Ga0070660_101656548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300005355\|Ga0070671_101332066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300005436\|Ga0070713_100159495	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300005547\|Ga0070693_101250079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300005548\|Ga0070665_100630424	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300005555\|Ga0066692_10986611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300005560\|Ga0066670_10147357	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300005569\|Ga0066705_10213901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1211	Open in IMG/M
3300005575\|Ga0066702_10127556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1484	Open in IMG/M
3300005764\|Ga0066903_100205799	All Organisms → cellular organisms → Bacteria	2954	Open in IMG/M
3300005764\|Ga0066903_102221450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1058	Open in IMG/M
3300005843\|Ga0068860_100888657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	907	Open in IMG/M
3300006028\|Ga0070717_10235969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1611	Open in IMG/M
3300006173\|Ga0070716_100186152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1368	Open in IMG/M
3300006173\|Ga0070716_100398061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	989	Open in IMG/M
3300006175\|Ga0070712_101564364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300006796\|Ga0066665_11633660	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300007255\|Ga0099791_10614228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300009098\|Ga0105245_10115141	All Organisms → cellular organisms → Bacteria	2505	Open in IMG/M
3300009101\|Ga0105247_10151600	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300009792\|Ga0126374_10666153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	778	Open in IMG/M
3300009792\|Ga0126374_11194166	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300010046\|Ga0126384_10326251	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1271	Open in IMG/M
3300010337\|Ga0134062_10488916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300010358\|Ga0126370_12309778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300010373\|Ga0134128_11689404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	697	Open in IMG/M
3300010398\|Ga0126383_10547998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1222	Open in IMG/M
3300012198\|Ga0137364_10702265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300012200\|Ga0137382_10829130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	666	Open in IMG/M
3300012201\|Ga0137365_10998086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300012202\|Ga0137363_10500967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1020	Open in IMG/M
3300012203\|Ga0137399_10670191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	873	Open in IMG/M
3300012206\|Ga0137380_11153176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	659	Open in IMG/M
3300012208\|Ga0137376_11278863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300012356\|Ga0137371_10947554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300012361\|Ga0137360_11505814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300012582\|Ga0137358_10445421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	874	Open in IMG/M
3300012683\|Ga0137398_10409387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	924	Open in IMG/M
3300012683\|Ga0137398_11192545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300012924\|Ga0137413_10565274	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300012925\|Ga0137419_10366394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1118	Open in IMG/M
3300012951\|Ga0164300_10609781	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300012951\|Ga0164300_10768206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300012955\|Ga0164298_11629344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300012984\|Ga0164309_10872742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	731	Open in IMG/M
3300012987\|Ga0164307_11802410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300012988\|Ga0164306_11006093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300012988\|Ga0164306_11880689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300012989\|Ga0164305_11244450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300012989\|Ga0164305_11401721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	615	Open in IMG/M
3300013296\|Ga0157374_10175981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2089	Open in IMG/M
3300013296\|Ga0157374_12226624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300013297\|Ga0157378_11464415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300013306\|Ga0163162_12300161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300013308\|Ga0157375_11865828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300014150\|Ga0134081_10290760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300014745\|Ga0157377_10588891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	792	Open in IMG/M
3300015241\|Ga0137418_10128436	All Organisms → cellular organisms → Bacteria → Proteobacteria	2254	Open in IMG/M
3300015372\|Ga0132256_102572357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300016319\|Ga0182033_10066500	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300016357\|Ga0182032_10277802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1313	Open in IMG/M
3300016371\|Ga0182034_10523131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	992	Open in IMG/M
3300016387\|Ga0182040_10298470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1231	Open in IMG/M
3300016404\|Ga0182037_10626157	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	915	Open in IMG/M
3300016422\|Ga0182039_10793078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300018081\|Ga0184625_10621074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300019356\|Ga0173481_10239196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	811	Open in IMG/M
3300025906\|Ga0207699_10858121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300025919\|Ga0207657_10180741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1705	Open in IMG/M
3300025926\|Ga0207659_10101656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2168	Open in IMG/M
3300025927\|Ga0207687_10074245	All Organisms → cellular organisms → Bacteria	2437	Open in IMG/M
3300025931\|Ga0207644_11622637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300025931\|Ga0207644_11745555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	521	Open in IMG/M
3300025939\|Ga0207665_10641363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300025960\|Ga0207651_11005401	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300026023\|Ga0207677_12302584	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300026078\|Ga0207702_11851055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300026300\|Ga0209027_1227785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300026312\|Ga0209153_1014527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2528	Open in IMG/M
3300026318\|Ga0209471_1148699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	970	Open in IMG/M
3300026322\|Ga0209687_1077202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1085	Open in IMG/M
3300026333\|Ga0209158_1140534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
3300026540\|Ga0209376_1129004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1243	Open in IMG/M
3300026547\|Ga0209156_10056437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2063	Open in IMG/M
3300026552\|Ga0209577_10104486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2290	Open in IMG/M
3300026557\|Ga0179587_10772975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300027787\|Ga0209074_10163465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	810	Open in IMG/M
3300028379\|Ga0268266_11308900	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300028381\|Ga0268264_10510185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1174	Open in IMG/M
3300028536\|Ga0137415_10711130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	817	Open in IMG/M
3300030945\|Ga0075373_11581935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300031231\|Ga0170824_113377600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300031231\|Ga0170824_116445894	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1124	Open in IMG/M
3300031446\|Ga0170820_11368704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300031719\|Ga0306917_10152645	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300031744\|Ga0306918_11213682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300031833\|Ga0310917_10711744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	680	Open in IMG/M
3300031910\|Ga0306923_11733322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300031941\|Ga0310912_11230006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300032001\|Ga0306922_10415823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1439	Open in IMG/M
3300033551\|Ga0247830_10460463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	997	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.18%
Host-Associated	Host-Associated	21.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.27%
Plants	Host-Associated → Plants	21.82%
Aquatic	Environmental → Aquatic	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Sediment	Environmental → Aquatic → Sediment	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.00%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.82%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_02584540	2170459002	Grass Soil	MKTKTPSDVIIPGHPNHLSKPTRRFLRGLLVFMLALGSLIALSARGQSNYTGAFYFTTFAGAAVGADGKGKLALFDRPKLYCNG
E41_10856690	2170459005	Grass Soil	VIIAGHPTHLSEPTRRFLRAVFVLMLALGSLIALSAQGQTNYTGAYYFTTLAGAAIGADGTGKPVLFDYPNFTAVDGVGKPTREVGSPSVYPVPRSN
JGI10216J12902_1093133071	3300000956	Soil	MKTKRTSGVIIASRSTNLSEPARRFLRGLLVLILALDSLIALSARGQGNYRGAHYFTTFAGAAIGCDGTPNEWSSPDLVGVGSGF
Ga0062592_1026700452	3300004480	Soil	MKPTKTKRTGVIITVHPNHLSEPTRRFLRGLLVFMLAFGSLIALSARGQSDYTGAYYFNTFAGAGVGADGKG
Ga0066680_100469444	3300005174	Soil	MIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNAYGGNGIGSQAIF
Ga0066685_100049665	3300005180	Soil	MIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNAYGGNGTGSQAIFAYPYATAVDGAGNVYVADT
Ga0066671_106597541	3300005184	Soil	MIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNTYGGNGTGSQAIFAYPYATAVDGAGNVYVADTYNY
Ga0066676_106958151	3300005186	Soil	MIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNAY
Ga0070670_1003276061	3300005331	Switchgrass Rhizosphere	MKTKTPTGVIISVHPAHLAEPTRRFLRGVLVFVLALGSLIALSARGQTNYTGAYYFNTFAGAAIGADGTGKLALFDYPNSTAMDSAGNGLENLNSAVVTDTFPAKCRA*
Ga0070660_1016565482	3300005339	Corn Rhizosphere	MKTKTPSGVIIPGHPNHLSQPTRRFLRGVLVFVLALGSLIALSARGQTNYTGAYYFNTFAGAAIGADGTGTLALFDRPNST
Ga0070671_1013320662	3300005355	Switchgrass Rhizosphere	MKTKTPSGVIIPGRPNHLSQPTRRFLRGVLVFVLALGSLIALSARGQSNYLAPYYFNTFAGNAFGGNGTGSQAIFNYPGATAVDGAGN
Ga0070713_1001594952	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKTPSGVIIPGHPNHLSEPTRRFLRGLLVFMLALGSLVALSAQGQSNYMGVYYFNTFAGNAFGGNGTGNPGDL*
Ga0070693_1012500791	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKTPSGVIIPGRPNHLSQPTRRFLRGVLVFVLALGSLIALSAKGQTHYTGAYYFTTFAGAAIGADGTGKPALFDYPNSTAVAPSRLRCRM*
Ga0070665_1006304242	3300005548	Switchgrass Rhizosphere	MKPTKTKRTGVIIAVHPSHLSEPTRRFLRGLLVFMLAFGSLIALSARGQSDYTGAYYFNTFAGAGVGADGKGK
Ga0066692_109866111	3300005555	Soil	MIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNAYGGNGTGSQAIFNYPYATAVDGAG
Ga0066670_101473571	3300005560	Soil	MKTKRISGVIIPGYPTHLSEPTRRFLHGLFVLMLALGSLIALSARGQSNYSGAYYFNTFAGNAYGGDGTGSQAI
Ga0066705_102139012	3300005569	Soil	MKSTKTKRTGMIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGN
Ga0066702_101275561	3300005575	Soil	MKQSLNFKQCLTRPTKTKRTGVVIARHSTHLSEPTRRFLRGLLVFMLALASLIALSARGQSNYTGAYYFNTFAGNAYGGNG
Ga0066903_1002057994	3300005764	Tropical Forest Soil	MKTKRISGVIIAGHPTHLSEPTRRFLRGLLVFMLAIGSLIALSARGQTNYTGAYYFNAFAGNAYGRTASRVNID*
Ga0066903_1022214502	3300005764	Tropical Forest Soil	MKQTQNFKQYLRSPAKTKQTGVIIAGHSTHLSEPTRRFLRGLLVVMLALGSLIALSAQGQTNYTGAYYFNTFAGNAYGGNGTGSQAIFSFPQATAIDG
Ga0068860_1008886571	3300005843	Switchgrass Rhizosphere	MKTKTPSGVIIPGHPTQLSEPTRRFLRGVLVFVLALGSLIALSARGQSNYTGAYYFTTLAGAAI
Ga0070717_102359693	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKTPSGVIIPGHPAQLSEPTRRFLRGLLVFVLALGSLIALSARGQSNYTGAYYFTTLAGAAIGADGTGKKALFDYPNSTAMD
Ga0070716_1001861523	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKRISGVIIAGHPTHLSGPTRRFLRGLLVFMLALGSLIALRARGQSNYTGAYYFNGFAGNAYGGNGSGSQAIFNFPCATAVAGTGNVIGTQEHKGDFREW*
Ga0070716_1003980612	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKTPSGVIIPGHPAQLSEPTRRFLRGLLVFVLALGSLIALSARGQSNYTGAYYFTTLAGAAIGADGTGKKALFDYP
Ga0070712_1015643641	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKQTGVIIAVHPTHFAEPTRRFLHGLLVFVLALGSLIALSARGQTNYKGAYYFNTFAGNAFGGNGTGSQAIFNYPGAT
Ga0066665_116336601	3300006796	Soil	MRTTKTKRTGVIIAAHPIHLAEPIRRFLHGLLVFMLALGSLVALSVRGQINYTGAYYFNTFAGNAYGGHGTGSQAIFDYPYATAVDGAGTV
Ga0099791_106142281	3300007255	Vadose Zone Soil	MKSTKTKRTGVLIAEHPNHLFQPTRQVFRAVFVLMLALGCLIALSAQAQSNYPLPYNFNTFAGNAYGGNGTGNQAIFN
Ga0105245_101151411	3300009098	Miscanthus Rhizosphere	MKTKTPSGVIIPGHPAQLSEPTRRFLRGVLVFVLALGSLIALSARGQSNYLAPYYFNTFAGNVYVADTYNYTVRNI
Ga0105247_101516001	3300009101	Switchgrass Rhizosphere	MKTKTPSGVIIPGRPNQLAEPTRRFLRGVLVFVLALGSLIALSARGQTNYKGAYYFNTFAGNAFGGNGTG
Ga0126374_106661531	3300009792	Tropical Forest Soil	MKTKRISGVIIAGHPAQLSEPTRRFLRGLLVFMLALGSLTALSARGQTIYTGAYYFSTFAGNAYGPT
Ga0126374_111941661	3300009792	Tropical Forest Soil	MKTKRISGVIIAGHPAQLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFSTFAGNAYGPTAGRANDTD*
Ga0126384_103262511	3300010046	Tropical Forest Soil	MKIKTPSGVIIARHRIHLSEPTRRFLRGLLVLILALGSLIALSARGQTNYVGAYYFTTFAGAAMGSDG
Ga0134062_104889161	3300010337	Grasslands Soil	MRPTSTKRSGVINAGNPNHLSQPTRRFLRGVLVLILALGSLIALSAHAQSNYPVPYNFNTFAGNAYGGNGTGSQAIFNNPY
Ga0126370_123097782	3300010358	Tropical Forest Soil	MKIKTPSGVIIARHRIHLSEPTRRFLRGLLVLILALGSLIALSARGQTNYVGGYYFNTFAGNAFGGN
Ga0134128_116894041	3300010373	Terrestrial Soil	MRTKTPSGVIIPGHPTQLSEPTRRFLRGVLVFVLALGSLIALSAQGQTHYTGAYYFTTLAGAAIGADGTGKKSLFDYPNSTAMDSAGNVYVA
Ga0126383_105479981	3300010398	Tropical Forest Soil	MKTKRISGVIIAGHPAHLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGGYYFSTFAGNAYGPTAGQAIDTD*
Ga0137364_107022651	3300012198	Vadose Zone Soil	MKTKTPSGVIIPGHPTQLSEPTRRFLRGLFLLILALVSLIALSAQGQSNYPAPYYFNTFAGNAYGGNGSGSQAIFNFPQATAVD
Ga0137382_108291302	3300012200	Vadose Zone Soil	MKTKTPTGVIISVHPTHLSESSRRFLRGLLVFMLAVGSLIALSARGQSNYTGAYYFNTFAGNAFGGNGTGN
Ga0137365_109980862	3300012201	Vadose Zone Soil	MKTKTPSGVIIPGHPNHLSEPTRRFLRGLLVLMLALGSIIALSAQGQTNYTGAYYFNTFA
Ga0137363_105009672	3300012202	Vadose Zone Soil	MKTKTPTGVIISVHPTHLAEPTRRFLHGVLVFVLALGSLIALSARGQSNYSGAYYFNTFAGNAFGGNGTGNQAIFDNPDATAVDGAGNVYVA
Ga0137399_106701912	3300012203	Vadose Zone Soil	MKTKTPTGVIIARHPNHLSESTRRFLRGLLVLMLALGTLIALSAQGQTNYTGAYYFTTFAGAAIGADGTGKPVLFDHPNSTAMPNTTNNSATDKDTIQ*
Ga0137380_111531761	3300012206	Vadose Zone Soil	MKTKTPSGVIIAGHPNLLSEPTRRFLRGLLVLMLALGSIIALSAQGQTNYTGAYYFNTFAGNAFGGNGTGSQAIFNYPG
Ga0137376_112788631	3300012208	Vadose Zone Soil	MKRTRVIIAQYPTHLSESTRRFLRGLLVLVLALGPLIALSARGQTNYTGAYYFNTFAGNAYGGD
Ga0137371_109475541	3300012356	Vadose Zone Soil	MKSTKTKRTGMIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNAYGGNGTGSQAIFAYPYATAVDGAGNV
Ga0137360_115058141	3300012361	Vadose Zone Soil	MKTKTPSGVIIPGHPTHLFEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNAYGG
Ga0137358_104454211	3300012582	Vadose Zone Soil	MKSTKTKRTGVIIARHPNHLSEPTRRFLRGLLVLMLALGTLIALSAQGQTNYTGAYYFTTFAGAAIGADGTGKPVLFDHPNSTAMPNTTNNSATDKDTIQ*
Ga0137398_104093871	3300012683	Vadose Zone Soil	MKTKTPTGVIISVHPTHLAEPTRRFLHGVLVFVLALGSLIALSARGQSNYMGAYYFNTFAGNAFGGNGTGSQ
Ga0137398_111925451	3300012683	Vadose Zone Soil	MKSTKTKRTGVLIAEHPNHLFQPTRQVFRAVFVLMLALGCLIALSAQAQSNYPLPYNFNTFAGNAYGGNGTGNQAIFNNPYATAVDSAGN
Ga0137413_105652742	3300012924	Vadose Zone Soil	MRPTKTKRTGVIIAGHPTHLSEPTRRFLRAVFVLMLALGSLIALSAEGQTNYTGAYYFNTFAGNAFGGNGSGSQAILNP
Ga0137419_103663942	3300012925	Vadose Zone Soil	MKTKTPTGVIISVHPTHLAEPTRRFLHGILVFVLALGSLIALSARGQSNYSGAYYFTTFAGAAIGADGTGKLALFDYPNS
Ga0164300_106097812	3300012951	Soil	MKTKTPSPGRPNHLSQPTRRFLRGVLVFVLALGSLIALSVRGQTNYKGAYYFNTFAGNAF
Ga0164300_107682061	3300012951	Soil	MKTKTPSGVIIPGHPAQLSEPTRRFLRGLPVLMLALGCLIALSAQAQSNYPVPYNFNTFAGNAYGGNGTGSQAIFGNPYASALDSAGNIY
Ga0164298_116293441	3300012955	Soil	MKTKTPSPGRPNHLSQPTRRFLRGVLVFVLALGSLIALSARGQSNYTGAYYFTTLAGAAI
Ga0164309_108727421	3300012984	Soil	MKTKRISGVIIAGHPVQLSEPIRRFLRGLLVFMLALGSLIALSARGQTNYTGTYYFNTFAGNAFGGNGSG
Ga0164307_118024101	3300012987	Soil	MKSTKTKRTGVIIAGYPNHLSEPTRRFLRGLLVLMLALGSLIALSAQGQSNYTGAYYFTTFAGAAIGADGTGKLALFNNPNFTAMDGAGNVYV
Ga0164306_110060931	3300012988	Soil	MKTKRISGVIIAGHPVQLSEPIRRFLRGLLVFMLALGSLIALSARGQTNYTSAYYFNTFAGNAFGGNGTGSQAIFNYPGATAVDGAGNVYVADT
Ga0164306_118806891	3300012988	Soil	MKMKTPSGVIIPGHPNHLSEPTRRFLRGLLVLMLALGSLIALSAQAQSNYPVPYNFNTFA
Ga0164305_112444502	3300012989	Soil	MKTKRTSGLIIAGHSTHLSESSRRFLRGLLVFMLALGSLIALNARGQTNYTGAYYFNTFAGAAIGADGTGKLALFDYPNSTAVDSAGNVYIAD
Ga0164305_114017211	3300012989	Soil	MKTKTPSGVIIPGRPNHLSQPTRRFLRGVLVFVLALGSLIALSARGQSNYTGAYYFTTLAGAAIGADGTGKKALFDYPNSTAMDSAGNVAPFQFWQSCLRLKN*
Ga0157374_101759812	3300013296	Miscanthus Rhizosphere	MKPTKTKRTGVIIAVHPSHLSEPTRRFLRGLLAFMLALGSIIALGARGQTNYTGAYYFNTFAGAAIGADGTGKLALF*
Ga0157374_122266241	3300013296	Miscanthus Rhizosphere	MKQTANLKQCLRKPMKTKRAGMIIVSHSAHLSEPTRRFLRGLLALVLALGSLIALRAQGQSNYPLPYNFNTFAGNAYGGNGTGSQAIFG
Ga0157378_114644151	3300013297	Miscanthus Rhizosphere	MKTKTPTGVIISVHPAHLAEPTRRFLRGVLVFVLALCSLIALSARGQSNYTGAYYFTTLAGAAI
Ga0163162_123001611	3300013306	Switchgrass Rhizosphere	MKTKTPSGVIIPGHPAELSEPTRRFLRGLLVFVLALGSLIALSARGQSNYTGAYYFTTLAGAAIGADGTGKKALFDYPNSTA
Ga0157375_118658281	3300013308	Miscanthus Rhizosphere	MKTKTPSGVIIPGHPAQLSEPTRRFLRGLLVFVLALGSLIALSARGQSNYLAPYYFNTFAGNAFGGNGTGSQAIFNYPGATAVDGAGNVYVADTY
Ga0134081_102907601	3300014150	Grasslands Soil	MKSTKTKRTGMIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNTYGGNGTGSHAIFAYPYAT
Ga0157377_105888911	3300014745	Miscanthus Rhizosphere	MKTKTPTGVIISVHPAHLAEPTRRFLRGVLVFVLALGSLIALSARGQSNYTGAYYFTTLAGAAIGADGTGKKAL
Ga0137418_101284364	3300015241	Vadose Zone Soil	MKTKTPTGVIISVHPTHLSESSRRFLRGLLVLMLALGTLIALSAQGQTNYTGAYYFTTFAGAAIGADGTGKPVLFDHPNSTAMPNTTNMTSVRSLATSSQS*
Ga0132256_1025723572	3300015372	Arabidopsis Rhizosphere	MKPTKTKRTGVIIAVHPNHLSEPNRRFLRGLLVFMLAFGSLIALSARGQSDYTGAYYFNIFAGAGVGADGK
Ga0182033_100665002	3300016319	Soil	MKTKRISGIIIAGHPAQLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYGPTAGQAIDTD
Ga0182032_102778022	3300016357	Soil	MKTKRISGVIIAGHPAPLTEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYGPTAGQAIDTD
Ga0182034_105231312	3300016371	Soil	MKTKRISGVIIAGHPAHLSEPTRRFLRGLLVFMIALGSIIALSARGQTNYTGAYYFNTFAGNAYGPTAGQAIDTD
Ga0182040_102984701	3300016387	Soil	MKTKRISGVIIAGHPAPLTEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYGPTAGRANDTD
Ga0182037_106261572	3300016404	Soil	MKTKRISGVIIAGRPAHLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYGPTAGRANDTD
Ga0182039_107930781	3300016422	Soil	MKTKRISGVIIAGRPAHLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYG
Ga0184625_106210741	3300018081	Groundwater Sediment	MKTKRISGVIIAGHPAHLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYGPSAGRANDTDRNQAASVGLESF
Ga0173481_102391961	3300019356	Soil	MKTKTPSGVIIPGRPNHLSQPTRRFLRGVLVFVLALGSLIALSARGQSNYTGAYYFTTLAGAVIGADGTGKKALFDYPNSTA
Ga0207699_108581211	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	QPTSTPNMRTKTPSGVIIPGHPTQLSEPTRRFLRGVLVFVLALGSLIALSAQGQTHYTGAYYFTTFAGAAIGADGTGKPALFDYPNSTAVAPSRLRCRM
Ga0207657_101807411	3300025919	Corn Rhizosphere	MKTKTPSGVIIPGHPAELSEPTRRFLRGLLVFVLALGSLIALSARGQSDYTGAYYFNTFAGAGVGADGKGKLALFDRPNSTATDSSGNV
Ga0207659_101016562	3300025926	Miscanthus Rhizosphere	MKPTKTKRTGVIIAVHPSHLSEPTRRFLRGLLVFMLALGSLIALSAQGQSNYAAPYYFNTFAGNAY
Ga0207687_100742451	3300025927	Miscanthus Rhizosphere	MKTKTPSGVIIPGHPNHLSQPTRRFLRGVLVFVLALGSLIALSARGQSNYLAPYYFNTFAGNAFGGNGTGSQAIFNYPGAT
Ga0207644_116226371	3300025931	Switchgrass Rhizosphere	MKTKTPSGVIIPGRPNHLSQPTRRFLRGVLVFVLALGSLIALSARGQSNYLAPYYFNTFAGNAFGGNGTGSQAIFNYP
Ga0207644_117455551	3300025931	Switchgrass Rhizosphere	MKAKITSGVIITVHPARLSEATRRFLRGLLVFMLALGSLIALSAQGQSNYAAPYYFNTFAGNAYGGNGTGSQAIFDFPQATAADSAGNLYVADSY
Ga0207665_106413631	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKRTSGVIIAGHPTHLSGPTRRFLRGLLVFMLALGSLIALRARGQSNYTGAYYFNGFAGNAYGGNGSGSQAIFNFPCATAVAGTGNVIGTQEHKGDFREW
Ga0207651_110054011	3300025960	Switchgrass Rhizosphere	MKAKITSGVIITVHPAHLSEATRRFLRGLLVFMLALGSLIALSAQGQSNYAAPYYFNTFAGNAYG
Ga0207677_123025841	3300026023	Miscanthus Rhizosphere	MKTKTPSGVIIPGRPNQLSEPTRRFLRGVLVFVLALGSLIALSARGQTNYTGAYYFNTFAGAAIGADGTGKLALFDYPNSTAMDSAGNGLENLNGAVVTDTFPAKCRA
Ga0207702_118510551	3300026078	Corn Rhizosphere	MKTKTPFGVIIPGHPTQLSEPTRRFLRGVLVFVLAFGSLIALSARGQTNYKGAYYFNTFAGNAFGGNGT
Ga0209027_12277851	3300026300	Grasslands Soil	MKPTKTKRTGVIIAGHSTQLSEPTRRFLRGFFVLMLALGSLIALSAQGQSNYPAPYAFNTFAGNAYGGNGT
Ga0209153_10145272	3300026312	Soil	MKQSLNFKQCLTRPTKTKRTGVVIARHSTHLSEPTRRFLRGLLVFMLALGSLIALSARGQSNYTGAYYFNTFAGNAYGGNGTGSQAIFAYPYATAV
Ga0209471_11486992	3300026318	Soil	MKTKTPFGVIIPGRPTHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNAY
Ga0209687_10772022	3300026322	Soil	MIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNAYGGNGTGSQAIFAYPY
Ga0209158_11405341	3300026333	Soil	MIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNAYGGNGIGS
Ga0209376_11290041	3300026540	Soil	MNTPNPYKMRPIKTKRTGVIIAGHPNHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPAPYYFNTFAGNAYGGNGTGSQAIFNYPGATAVDGAGN
Ga0209156_100564371	3300026547	Soil	MKTKKTSGVIIAGHPTHLSEPTRRFLRGLLVFVLAFGSLIALGARAQSNYPAPYYFNTFAGNAYGGNG
Ga0209577_101044861	3300026552	Soil	MKTKTPSGVIIPGRPTHLSEPTRRFLRGLLVFVLALGSLIALGARAQSNYPTPYYFNTFAGNAYG
Ga0179587_107729751	3300026557	Vadose Zone Soil	MRPTKTKRTGVIIAGHSTHLSEPIRRLLRGFFVLMLALGSLIALSAQGQSNYPAPYAFNTFAGNAYGGNGTGTQAIFNNPYATAVDSA
Ga0209074_101634652	3300027787	Agricultural Soil	MRPTKTKQTGAIIAEHPTYLSEPTRRFLRGLLVFVLAFGSLIALSARGQSNYTGAYHFTTLAGAAIGADGTGKLALFDKPNSTATDSAG
Ga0268266_113089002	3300028379	Switchgrass Rhizosphere	MKPTKTKRTGVIIAVHPSHLSEPTRRFLRGLLVFMLAFGSLIALSARGQSDYTGAYYFNTFAGAGVG
Ga0268264_105101851	3300028381	Switchgrass Rhizosphere	MKTKTPSGVIIPGHPAQLSEPTRRFLRGLLVFMLALGSLIALSAQGQSNYAAPYYFNTFAGNAYGGNGTGSQAIFDFPQATAA
Ga0137415_107111301	3300028536	Vadose Zone Soil	MKTKTPTGVIISVHPTHLSEPIRRFLHGLLVLMLALGTLIALSAQGQTNYTGAYYFTTFAGAAIEADGTGKPVLFDHP
Ga0075373_115819352	3300030945	Soil	MKTKRISGVIIAGHPAHLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTSAYYFNTFAGNAYGPTAGRANDTDRNQAASVVIVTSFIKKCGALLGCAFEG
Ga0170824_1133776001	3300031231	Forest Soil	MKTKRISGVIIAGHPAQLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYGPTAGRANDTDRNQAASVGLESF
Ga0170824_1164458941	3300031231	Forest Soil	MRPTKTKRTGVIIAGHPTHLSEPTRRFLRAVFVLMLALGSLIALSAQGQTNYTGAYYFTTFAGAAIGA
Ga0170820_113687041	3300031446	Forest Soil	QLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYGPTAGRANDTDRNQAASVGLESF
Ga0306917_101526452	3300031719	Soil	MKTKRISGVIIAEHPAHLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYGPTAGQAIDTD
Ga0306918_112136821	3300031744	Soil	MKTKRISGVIIAGHPAHLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYGPTAGQAIDTD
Ga0310917_107117441	3300031833	Soil	KTKRISGVIIAGHPAHLSEPTRRFLRGLLVFMIALGSIIALSARGQTNYTGAYYFNTFAGNAYGPTAGRANDTD
Ga0306923_117333221	3300031910	Soil	MKTKRISGVIIAGHPAHLSEPTRRFLRGLLVFMIALGSIIALSARGQTNYTGAYYFNTFAGNAYGPTAGRANDTD
Ga0310912_112300061	3300031941	Soil	VIIAGHPAHLSEPTRRFLRGLLVFMLALGSLIALSARGQTNYTGAYYFNTFAGNAYGPTAGQAIDTD
Ga0306922_104158233	3300032001	Soil	IAGHPAHLSEPTRRFLRGLLVFMIALGSIIALSARGQTNYTGAYYFNTFAGNAYGPTAGRANDTD
Ga0247830_104604631	3300033551	Soil	MKTKRISGVIIAGHPAHLSEPTRRFLRGLLVFMLALGSLIGLSARGQTNYTGAYYFNTFAGNAYGPTAGRANDTDRNQAASVGLESF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087661

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences