Metagenome Family F087588

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087588
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	48 residues
Representative Sequence	AGYTFPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYTHGS
Number of Associated Samples	78
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.82 %
% of genes near scaffold ends (potentially truncated)	93.64 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.818 % of family members)
Environment Ontology (ENVO)	Unclassified (40.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 34.25% Coil/Unstructured: 65.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13193	AMP-binding_C	4.55
PF01042	Ribonuc_L-PSP	2.73
PF02782	FGGY_C	2.73
PF00155	Aminotran_1_2	1.82
PF12697	Abhydrolase_6	1.82
PF10025	DUF2267	0.91
PF00196	GerE	0.91
PF12802	MarR_2	0.91
PF12680	SnoaL_2	0.91
PF13556	HTH_30	0.91
PF13578	Methyltransf_24	0.91
PF00440	TetR_N	0.91
PF01522	Polysacc_deac_1	0.91
PF13586	DDE_Tnp_1_2	0.91
PF08818	DUF1801	0.91
PF02371	Transposase_20	0.91
PF05163	DinB	0.91
PF03176	MMPL	0.91
PF00128	Alpha-amylase	0.91
PF09413	DUF2007	0.91
PF10503	Esterase_PHB	0.91
PF00248	Aldo_ket_red	0.91
PF01833	TIG	0.91
PF00313	CSD	0.91
PF16640	Big_3_5	0.91
PF01061	ABC2_membrane	0.91
PF02190	LON_substr_bdg	0.91
PF00324	AA_permease	0.91
PF13641	Glyco_tranf_2_3	0.91
PF12681	Glyoxalase_2	0.91
PF13424	TPR_12	0.91
PF11716	MDMPI_N	0.91
PF01872	RibD_C	0.91
PF00753	Lactamase_B	0.91
PF07883	Cupin_2	0.91
PF05231	MASE1	0.91
PF08240	ADH_N	0.91
PF04073	tRNA_edit	0.91
PF04185	Phosphoesterase	0.91
PF12867	DinB_2	0.91
PF03144	GTP_EFTU_D2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	2.73
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.91
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.91
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.91
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.91
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.91
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.91
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.91
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.91
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.91
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.91
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.91
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.91
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.91
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.91
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.91
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.91
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.91
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.91
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.91
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.91
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.27 %
Unclassified	root	N/A	32.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.27 %
Unclassified	root	N/A	32.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.27 %
Unclassified	root	N/A	32.73 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.18 %
Unclassified	root	N/A	32.73 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	17.27 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.27 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	15.45 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1.82 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	15.45 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.91 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.91 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.91 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.91 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.91 %
Herpetosiphonales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales	0.91 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	15.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.91 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.91 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.91 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.91 %
Herpetosiphonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae	0.91 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	15.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
unclassified Herpetosiphonaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae	0.91 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.91 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.91 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.91 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.91 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.91 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	15.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Spirosoma	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma	0.91 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.91 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.91 %
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	0.91 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.91 %
Herpetosiphonaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	0.91 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	15.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Streptomyces sp. IMTB 2501	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. IMTB 2501	0.91 %
Spirosoma luteum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma luteum	0.91 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.91 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.91 %
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	0.91 %
Herpetosiphonaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	0.91 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01BGXQ7	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300000890\|JGI11643J12802_10560621	Not Available	559	Open in IMG/M
3300000956\|JGI10216J12902_100189781	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300000956\|JGI10216J12902_103922413	All Organisms → cellular organisms → Bacteria → Terrabacteria group	999	Open in IMG/M
3300000956\|JGI10216J12902_105049049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300000956\|JGI10216J12902_107895195	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1274	Open in IMG/M
3300000956\|JGI10216J12902_109936077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300000956\|JGI10216J12902_117394194	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300004114\|Ga0062593_101532528	All Organisms → cellular organisms → Bacteria → Terrabacteria group	720	Open in IMG/M
3300005093\|Ga0062594_101729909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300005172\|Ga0066683_10097403	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300005172\|Ga0066683_10220814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1172	Open in IMG/M
3300005175\|Ga0066673_10648492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	611	Open in IMG/M
3300005177\|Ga0066690_10501882	All Organisms → cellular organisms → Bacteria → Terrabacteria group	817	Open in IMG/M
3300005178\|Ga0066688_10626908	Not Available	690	Open in IMG/M
3300005332\|Ga0066388_103871062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	764	Open in IMG/M
3300005332\|Ga0066388_106627612	Not Available	583	Open in IMG/M
3300005332\|Ga0066388_107679263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300005445\|Ga0070708_100546422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1093	Open in IMG/M
3300005445\|Ga0070708_101042001	All Organisms → cellular organisms → Bacteria → Terrabacteria group	767	Open in IMG/M
3300005467\|Ga0070706_100141534	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300005467\|Ga0070706_101484938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	620	Open in IMG/M
3300005468\|Ga0070707_100287581	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300005556\|Ga0066707_10217474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1238	Open in IMG/M
3300005557\|Ga0066704_10076977	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300005557\|Ga0066704_10756046	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_100963026	Not Available	1554	Open in IMG/M
3300005764\|Ga0066903_105768344	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005843\|Ga0068860_102292378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	560	Open in IMG/M
3300006028\|Ga0070717_11533203	Not Available	604	Open in IMG/M
3300006175\|Ga0070712_100077260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2400	Open in IMG/M
3300006791\|Ga0066653_10277624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	850	Open in IMG/M
3300006796\|Ga0066665_10343552	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300007076\|Ga0075435_101140901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300009012\|Ga0066710_100146967	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3270	Open in IMG/M
3300009012\|Ga0066710_101013465	Not Available	1282	Open in IMG/M
3300009038\|Ga0099829_11266528	Not Available	610	Open in IMG/M
3300009088\|Ga0099830_11353894	Not Available	592	Open in IMG/M
3300009090\|Ga0099827_10159797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1850	Open in IMG/M
3300009090\|Ga0099827_11888913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300009100\|Ga0075418_10664893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1122	Open in IMG/M
3300009137\|Ga0066709_100120991	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3270	Open in IMG/M
3300009137\|Ga0066709_103944376	Not Available	539	Open in IMG/M
3300009792\|Ga0126374_11050748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	642	Open in IMG/M
3300010047\|Ga0126382_10065009	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2208	Open in IMG/M
3300010048\|Ga0126373_12405561	Not Available	586	Open in IMG/M
3300010303\|Ga0134082_10351039	Not Available	625	Open in IMG/M
3300010337\|Ga0134062_10061318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1552	Open in IMG/M
3300010358\|Ga0126370_10028610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3323	Open in IMG/M
3300010359\|Ga0126376_13227573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	504	Open in IMG/M
3300010361\|Ga0126378_10971950	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300010361\|Ga0126378_12250093	All Organisms → cellular organisms → Bacteria → Terrabacteria group	622	Open in IMG/M
3300010376\|Ga0126381_100541434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1648	Open in IMG/M
3300010376\|Ga0126381_101573816	Not Available	950	Open in IMG/M
3300010376\|Ga0126381_104019303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	572	Open in IMG/M
3300011270\|Ga0137391_10569583	Not Available	953	Open in IMG/M
3300011271\|Ga0137393_10655154	Not Available	900	Open in IMG/M
3300012198\|Ga0137364_10829724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	699	Open in IMG/M
3300012198\|Ga0137364_11314644	Not Available	538	Open in IMG/M
3300012199\|Ga0137383_10884990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	652	Open in IMG/M
3300012199\|Ga0137383_11162206	Not Available	556	Open in IMG/M
3300012204\|Ga0137374_10816234	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300012206\|Ga0137380_10132374	Not Available	2276	Open in IMG/M
3300012206\|Ga0137380_10196885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1828	Open in IMG/M
3300012207\|Ga0137381_10144870	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300012207\|Ga0137381_10529391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1028	Open in IMG/M
3300012209\|Ga0137379_10724886	Not Available	900	Open in IMG/M
3300012209\|Ga0137379_10993477	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma → Spirosoma luteum	744	Open in IMG/M
3300012209\|Ga0137379_11103889	Not Available	699	Open in IMG/M
3300012209\|Ga0137379_11320059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300012209\|Ga0137379_11642947	Not Available	540	Open in IMG/M
3300012210\|Ga0137378_10411623	Not Available	1254	Open in IMG/M
3300012211\|Ga0137377_10921221	Not Available	805	Open in IMG/M
3300012349\|Ga0137387_10075741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2304	Open in IMG/M
3300012356\|Ga0137371_10377886	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300012357\|Ga0137384_10431826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1085	Open in IMG/M
3300012357\|Ga0137384_10959475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300012357\|Ga0137384_11269545	Not Available	583	Open in IMG/M
3300012358\|Ga0137368_10959260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300012359\|Ga0137385_10375107	Not Available	1216	Open in IMG/M
3300012359\|Ga0137385_10724166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300012363\|Ga0137390_10027650	All Organisms → cellular organisms → Bacteria	5360	Open in IMG/M
3300012363\|Ga0137390_10722084	Not Available	958	Open in IMG/M
3300012532\|Ga0137373_10384079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. IMTB 2501	1094	Open in IMG/M
3300012930\|Ga0137407_10053617	All Organisms → cellular organisms → Bacteria	3289	Open in IMG/M
3300012948\|Ga0126375_12051683	Not Available	507	Open in IMG/M
3300012975\|Ga0134110_10495504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300012976\|Ga0134076_10006243	All Organisms → cellular organisms → Bacteria	3945	Open in IMG/M
3300013294\|Ga0120150_1010299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2000	Open in IMG/M
3300015077\|Ga0173483_10704512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300015359\|Ga0134085_10593171	Not Available	514	Open in IMG/M
3300015371\|Ga0132258_13139926	Not Available	1141	Open in IMG/M
3300018431\|Ga0066655_10065267	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1931	Open in IMG/M
3300018431\|Ga0066655_10196492	Not Available	1243	Open in IMG/M
3300018431\|Ga0066655_10941496	Not Available	593	Open in IMG/M
3300018482\|Ga0066669_10056262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	2519	Open in IMG/M
3300021080\|Ga0210382_10567455	Not Available	503	Open in IMG/M
3300021086\|Ga0179596_10656834	Not Available	531	Open in IMG/M
3300021475\|Ga0210392_11456727	Not Available	512	Open in IMG/M
3300022694\|Ga0222623_10154091	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300025910\|Ga0207684_11707595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300025922\|Ga0207646_11065840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	712	Open in IMG/M
3300025927\|Ga0207687_10944326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	739	Open in IMG/M
3300025929\|Ga0207664_11155815	Not Available	691	Open in IMG/M
3300026536\|Ga0209058_1281411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300027725\|Ga0209178_1344728	Not Available	556	Open in IMG/M
3300028380\|Ga0268265_11618696	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300028784\|Ga0307282_10151594	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300028793\|Ga0307299_10103718	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300032122\|Ga0310895_10731417	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.64%
Host-Associated	Host-Associated	5.45%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.82%
Plants	Host-Associated → Plants	5.45%
Aquatic	Environmental → Aquatic	1.82%
Solid Waste	Engineered → Solid Waste	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.73%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Sediment	Environmental → Aquatic → Sediment	0.91%
Grass	Engineered → Solid Waste → Grass	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.27%
Loam	Environmental → Terrestrial → Soil → Loam	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%
Composting	Engineered → Solid Waste → Grass → Composting	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.18%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_03011890	2170459015	Switchgrass, Maize And Mischanthus Litter	DYFGIAVSSTGVAHVVWGEADGSSLYCCGDVWYTRGS
JGI11643J12802_105606211	3300000890	Soil	GAPYKSPDGYTFTDGDYFGISVGSTGIAHVIWGEADGSSLYCCGDVWYTKGS*
JGI10216J12902_1001897812	3300000956	Soil	GDYFGIAVSSTGVAHVIWGEADGSSLYCCGDVWYTNGS*
JGI10216J12902_1039224132	3300000956	Soil	SPDGYTFTDGDYFGIAVGSTGVAHVIWGEADGSSLYCCGDVWYTKGA*
JGI10216J12902_1050490491	3300000956	Soil	AGYTFPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYTHGS*
JGI10216J12902_1078951952	3300000956	Soil	PHVRISNLGSGAPYKSTGGYTFTDGDYFGIAVSSTGIAHVIWGEADGSSLYCCGDVWYTKGS*
JGI10216J12902_1099360772	3300000956	Soil	YKSPDGYTFTDGDYFGIAVSSTGIAHLIWGEADGSSLYCCGDVWYTKGS*
JGI10216J12902_1173941941	3300000956	Soil	AGYTFPDGDYFGIAVSSAGITHAIWGEADGSSIYCCGDTWYTHGS*
Ga0062593_1015325281	3300004114	Soil	DGYTFTDGDYFGIAVSSTGMAHVIWGEADGSSLYCCGDVWYAHGS*
Ga0062594_1017299092	3300005093	Soil	YTFPDGDYFGMAVSSTGIAHVIWGEADGSSLYCCGDVWYTKGS*
Ga0066683_100974033	3300005172	Soil	PARPSGGSSTLRSGAQYKVADGYTFTDGDYFGLAVSSTGIAYVIWGEADGSSLYCCGDVWYTRGS*
Ga0066683_102208141	3300005172	Soil	GDYFGLAVSSTGIANVIWGESDGSSLYWLCDVWYTKGPDR*
Ga0066673_106484922	3300005175	Soil	RLSNLDSGAPYKSAMGYTFTNGDYFGIAVGSTGIAHVIWGEADGSSLYCCGDVWYARGF*
Ga0066690_105018822	3300005177	Soil	PYKSPAGYTFTDGDYFGIAVSSAGIVYAMWGEADGSSIYCCGDAWYTRGFIGAS*
Ga0066688_106269082	3300005178	Soil	LSSGAPYKSPAGYTFTDGDYFGIAVSSVGVTYAIWGEADGSSIYCCGDVWYTKGS*
Ga0066388_1038710621	3300005332	Tropical Forest Soil	YKSPAGYTFPDGDYFGIAVSSAGITHAIWGEADGSSIYCCGDTWYTHGT*
Ga0066388_1066276121	3300005332	Tropical Forest Soil	FPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWDTHGS*
Ga0066388_1076792631	3300005332	Tropical Forest Soil	RASGAPYKSPAGYTFPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYAEGS*
Ga0070708_1005464222	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SGAPYKSPAGYTFPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYTQGS*
Ga0070708_1010420012	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TSGAPYKSPAGYTFPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYAQGS*
Ga0070706_1001415341	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PYKSPAGYTFPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWSAHGS*
Ga0070706_1014849382	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RTSGAPYKSPAGYTFPDGDYFGLAVSSAGITYAIWGEADGSSIYCCGDTWYVQGS*
Ga0070707_1002875814	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AGYTFPDGDYFGIAVSSAGVTHAIWGESDGSSIYCCGDTWYAHGS*
Ga0066707_102174741	3300005556	Soil	YKSPDGYTFTDGDYFGIAVSSTGIAHVTWGEADGSSLYCCGDVWYTKGS*
Ga0066704_100769773	3300005557	Soil	DGYTFTDGDYFGIAVGSTGVAHIIWGEADGSSLYCCGDTWYTKGS*
Ga0066704_107560461	3300005557	Soil	GDYFGLAVDSVGTNHVIWGEADGSSLYCCGGTWYTRGA*
Ga0066903_1009630261	3300005764	Tropical Forest Soil	DYFGIAVSSTGVTQAIWGEADGSSLYCCGDTWYTRGA*
Ga0066903_1057683442	3300005764	Tropical Forest Soil	GIAVSSAGVTYAIWGEADGSSIYCCGDTWYAQGS*
Ga0068860_1022923783	3300005843	Switchgrass Rhizosphere	PYKSPDGYTFTDGDYFGIAVGSTGIAHVIWGEADGSSLYCCGDVWYTRGS*
Ga0070717_115332031	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FGIAVSSAGITYAIWGEADGSSIYCCGDTWYAQGS*
Ga0070712_1000772601	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VGYTFPDGDYFGMAVSSTGIAHVIWGEADGSSLYCCGDVWYTKGS*
Ga0066653_102776241	3300006791	Soil	SPAGYTFPDGDYFGMAVSSTGIAHVIWGEADGSSLYCCGDTWYTKGS*
Ga0066665_103435521	3300006796	Soil	GIAVSSTGVAHVIWGEADGSSLYCCGDVWYTKGS*
Ga0075435_1011409013	3300007076	Populus Rhizosphere	PYKRPAGYTFTDGDYFGIAVSSTGIAHVVWGEADGSSLYCCGDVWYTKGS*
Ga0066710_1001469674	3300009012	Grasslands Soil	RLSNLGSGPPYKSPDGYTFTDGDYFGIAVSSTGIAHVTWGEADGSSLYCCGDVWYTKGS
Ga0066710_1010134652	3300009012	Grasslands Soil	YGAPYKSPAGYTFTDGDYFGLAVGPTGTSFAIWGESDGSSIYCCGDVWYTKGS
Ga0099829_112665282	3300009038	Vadose Zone Soil	TDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDVWYTRGS*
Ga0099830_113538941	3300009088	Vadose Zone Soil	YFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYTQGF*
Ga0099827_101597971	3300009090	Vadose Zone Soil	PDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYARGS*
Ga0099827_118889132	3300009090	Vadose Zone Soil	PYKSPAGYTFPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYTHGS*
Ga0075418_106648931	3300009100	Populus Rhizosphere	GSGAPYKSPDGYTFTDGDYFGIAVSSTGVAHVVWGEADGSSLYCCGDVWYTRGS*
Ga0066709_1001209914	3300009137	Grasslands Soil	RLSNLGSGPPYKSPDGYTFTDGDYFGIAVSSTGIAHVTWGEADGSSLYCCGDVWYTKGS*
Ga0066709_1039443762	3300009137	Grasslands Soil	KLSNLTYGAPYKSPAGYTFTDGDYFGLAVGPTGTSFAIWGEADGSSIYCCGDVWFTKGS*
Ga0126374_110507482	3300009792	Tropical Forest Soil	APYKSPAGYTFPDGDYFGIAVSPAGITYAIWGEADGSSIYCCGDTWYTHGT*
Ga0126382_100650093	3300010047	Tropical Forest Soil	AGYTFPDGDYFGIAVSSAGITYAIWGEADGSAIYCCGDTWYAKGS*
Ga0126373_124055611	3300010048	Tropical Forest Soil	GYTFPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYAQGS*
Ga0134082_103510391	3300010303	Grasslands Soil	AFPDGDYFGLAVDSAGTNHVIWGEADGSSLYCCGGAWYTRGV*
Ga0134062_100613181	3300010337	Grasslands Soil	YTFTDGDYFGLAVSSTGIAYVIWGEADGSSLYCCGDVWYTKGS*
Ga0126370_100286101	3300010358	Tropical Forest Soil	KSPAGYTFPDGDYFGIAVSSAGITHAIWGEADGSSIYCCGDTWYTRGRAAGR*
Ga0126376_132275731	3300010359	Tropical Forest Soil	DRASGAPYKSPAGYTFPDGDYFGIAVSSAGITYAIWGEADGSAIYCCGDTWYAKGS*
Ga0126378_109719501	3300010361	Tropical Forest Soil	VKLSNRTSGAPYKSPAGYTFPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYAQGS
Ga0126378_122500931	3300010361	Tropical Forest Soil	KLSNRTSGAPYKSPAGYTFPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYAQGS*
Ga0126381_1005414341	3300010376	Tropical Forest Soil	AGYRFPDGDYFGIAVSSAGITHAIWGEADGSSIYCCGDTWDTHGS*
Ga0126381_1015738162	3300010376	Tropical Forest Soil	FPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYARGS*
Ga0126381_1040193032	3300010376	Tropical Forest Soil	ASGAPYKSPAGYTFPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYAEGS*
Ga0137391_105695832	3300011270	Vadose Zone Soil	YFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYAHGS*
Ga0137393_106551542	3300011271	Vadose Zone Soil	DYFGIAVSSAGITYAIWGEADGSSIYCCGDVWYTKGT*
Ga0137364_108297241	3300012198	Vadose Zone Soil	YKTADGYAFTDGDYFGLAVSSTGIASVIWGEADGSSLYCCGDVWYTKGS*
Ga0137364_113146441	3300012198	Vadose Zone Soil	SNRTSGAPYKSAAGYTFPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYTQGS*
Ga0137383_108849902	3300012199	Vadose Zone Soil	APYKSPAGYSFPDGDYFGIAVSSAGVTYVIWGEADGSSLYCCGDTWYAQGS*
Ga0137383_111622061	3300012199	Vadose Zone Soil	PYKSSDGYTFTDGDYFGIAVSSTGMTHVIWGETDGSSLYCFGDTWYARGL*
Ga0137374_108162342	3300012204	Vadose Zone Soil	LTACSSSRPTGAAYKRPDGYAFTDGDYFGIAVSSTGVAHVIWGEADGSSLYCCGDVWYTKGS*
Ga0137380_101323744	3300012206	Vadose Zone Soil	YKSPAGYTFPDGDYFGIAVNSAGITYAIWGEADGSSIYCCGDTWYAQGS*
Ga0137380_101968853	3300012206	Vadose Zone Soil	SSGAPYKSPAGYTFTDGDYFGIAVSSTGVAHVAWGEADGSSLYCCGDVWYSRGS*
Ga0137381_101448701	3300012207	Vadose Zone Soil	TFPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYAHGS*
Ga0137381_105293911	3300012207	Vadose Zone Soil	PDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYAHGF*
Ga0137379_107248862	3300012209	Vadose Zone Soil	VTLAAVATSSPPAPCRFPDGDYFGIAVSSAGVTYAIWGKVDGSSLYCCGDTWYAQGS*
Ga0137379_109934771	3300012209	Vadose Zone Soil	LTACSSSRPTGAAYKRPDGYAFTDGDYFGIAVSSTGVAHVIWGEADGSSLYCCGDIWYTKGS*
Ga0137379_111038891	3300012209	Vadose Zone Soil	SFPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYAQGS*
Ga0137379_113200591	3300012209	Vadose Zone Soil	GGGSWSKQVKLSDLSSGAPYKSPDGYAFTDGDHFGIAVSSAGVTYAIWGGADGSSIYCCGDVWYAKGS*
Ga0137379_116429471	3300012209	Vadose Zone Soil	SFPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYAQGP*
Ga0137378_104116232	3300012210	Vadose Zone Soil	YKGPAGYTFPDGDYFGIAVNSAGVTYAIWGEADGSSIYCCGDTWYAHGF*
Ga0137377_109212211	3300012211	Vadose Zone Soil	GDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYAQGS*
Ga0137387_100757411	3300012349	Vadose Zone Soil	PGEVKLSDLTSGAAYKSPAGYTFPDGDYFGIAVSPAGVTYAVWGEADGSSIYCCGDVWYAHGS*
Ga0137371_103778861	3300012356	Vadose Zone Soil	LSNLSSGAPYKSPAGYTFPDGDYFGIAVSSAGVTHAVWGEADGSSLYCCGDTWYTQGS*
Ga0137384_104318261	3300012357	Vadose Zone Soil	DGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDAWYAHGS*
Ga0137384_109594752	3300012357	Vadose Zone Soil	FTDGDHFGIAVSSAGVTYAIWGGADGSSIYCCGDVWYAKGS*
Ga0137384_112695451	3300012357	Vadose Zone Soil	DYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYAHGF*
Ga0137368_109592601	3300012358	Vadose Zone Soil	YFGIAVSSTGVAHTIWGEADGSSLYCCGDVWYTKGS*
Ga0137385_103751072	3300012359	Vadose Zone Soil	TADGYAFTDGDYFGLAVDSAGTNYVIWGEADGSSLYCCGGAWYARGG*
Ga0137385_107241662	3300012359	Vadose Zone Soil	FGIAVSSAGVTYAIWGEADGSSIYCCGDVWYAKGS*
Ga0137390_100276506	3300012363	Vadose Zone Soil	DYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYAQGS*
Ga0137390_107220842	3300012363	Vadose Zone Soil	DGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYAHGS*
Ga0137373_103840793	3300012532	Vadose Zone Soil	YKSPDGYTFTDGDYFGIAVGSTGVAHVIWGEADGSSLYCCGDVWYTKGS*
Ga0137407_100536174	3300012930	Vadose Zone Soil	VKLSNLTSGAPYKSPAGYTFPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYAHGS
Ga0126375_120516831	3300012948	Tropical Forest Soil	DYFGIAVSSAGITYAIWGEADGSAIYCCGDTWYAKGS*
Ga0134110_104955041	3300012975	Grasslands Soil	LSDLSSGATYKSPDGYAFTDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDVWYAKGS*
Ga0134076_100062434	3300012976	Grasslands Soil	AFPDGDYFGLAVDSVGTNHVIWGEADGSSLYCCGGTWYTRGA*
Ga0120150_10102993	3300013294	Permafrost	GYTFPDGDYFGLAVGSTGTSFAIWGEADGSSIYCCGDVWFTRGS*
Ga0173483_107045121	3300015077	Soil	GPQVRLSNLGSGAPYKSATGYTFTDGDYFGIAVSSTGIAHVIWGEADGSSLYCCGDVWYTKGS*
Ga0134085_105931711	3300015359	Grasslands Soil	FGLAVDSVGTNHVIWGEADGSSLYCCGGTWYTRGA*
Ga0132258_131399261	3300015371	Arabidopsis Rhizosphere	ASWGSQVRMSNLTSGAPYKSAAGYAFTDGDYFGLAVGSTGVAHLIWGEADGSSLYCCGDVWFTKGS*
Ga0066655_100652672	3300018431	Grasslands Soil	VKLSNRTSTAPDKAAAGYTFPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYAHGS
Ga0066655_101964922	3300018431	Grasslands Soil	YSFPDGDYFGLTVDSAGTNHVIWGEADGSSLYCCGGAWYTRGV
Ga0066655_109414962	3300018431	Grasslands Soil	KLSNLTSGATYKHPDGYTFTDGDYFGIAVSSTGIAHVIWGEADGSSLYCCGDTWYTKGS
Ga0066669_100562621	3300018482	Grasslands Soil	QVKLSNRTSGAPYKSAAGYTFPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYAHG
Ga0210382_105674551	3300021080	Groundwater Sediment	PDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYAHGS
Ga0179596_106568341	3300021086	Vadose Zone Soil	DYFGIAVSSAGITYAIWGEADGSSIYCCGDVWYTRGS
Ga0210392_114567271	3300021475	Soil	GDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYTRGP
Ga0222623_101540911	3300022694	Groundwater Sediment	YFGIAVGSTGIAHVIWGEADGSSLYCCGDVWYTKGS
Ga0207684_117075951	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	DGDYFGIAVSSTGIAHVIWGEADGSSLYCCGDVWYTKGP
Ga0207646_110658401	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	YTFTDGDYFGIAVSSTGIAHVIWGEADGSSLYCCGDVWYTKGS
Ga0207687_109443262	3300025927	Miscanthus Rhizosphere	DGDYFGMAVSSTGIAHVIWGEADGSSLYCCGDVWYTKGS
Ga0207664_111558151	3300025929	Agricultural Soil	VKLSNRTSGAPYKSPAGYTFPDGDYFGIAVSSAGVTYAIWGEADGSSIYCCGDTWYTQGS
Ga0209058_12814112	3300026536	Soil	PDGYTFTDGDYFGIAVSSTGIAHVTWGEADGSSLYCCGDVWYTKGS
Ga0209178_13447281	3300027725	Agricultural Soil	VKLSNRTSGAPYKSPAGYTFPDGDYFGIAVSSAGITYAIWGEADGSSIYCCGDTWYTHGS
Ga0268265_116186962	3300028380	Switchgrass Rhizosphere	GYTFTDGDYFGIAVDSTGTAHVIWGEADGSSLYCCGDVWYTKGS
Ga0307282_101515943	3300028784	Soil	GDYFGLAVSSTGTAHVAWGEAYGSSLYCCGDVWYTRGS
Ga0307299_101037181	3300028793	Soil	DGYTFTDGDYFGIAVGSTGIAHVIWGEADGSSLYCCGDVWYTKGS
Ga0310895_107314171	3300032122	Soil	PYKSSDGYTFTDGDYFGIAVGSTGIAHVIWGEADGSSLYCCGDVWYTKGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087588

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences