Metagenome Family F087565

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087565
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	97 residues
Representative Sequence	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQR
Number of Associated Samples	85
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.17 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	89.09 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (93.636 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.545 % of family members)
Environment Ontology (ENVO)	Unclassified (61.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (44.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.40% β-sheet: 17.60% Coil/Unstructured: 68.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00271	Helicase_C	8.18
PF02075	RuvC	0.91
PF15943	YdaS_antitoxin	0.91
PF05063	MT-A70	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	1.82
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.64 %
All Organisms	root	All Organisms	6.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.64 %
cellular organisms	root	All Organisms → cellular organisms	6.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.64 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.64 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101914196	Not Available	553	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101916607	Not Available	540	Open in IMG/M
3300000955\|JGI1027J12803_107155290	Not Available	604	Open in IMG/M
3300004633\|Ga0066395_10208492	Not Available	1027	Open in IMG/M
3300004633\|Ga0066395_11007585	Not Available	508	Open in IMG/M
3300005332\|Ga0066388_100063114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3948	Open in IMG/M
3300005332\|Ga0066388_101623004	Not Available	1139	Open in IMG/M
3300005332\|Ga0066388_106788776	Not Available	576	Open in IMG/M
3300005335\|Ga0070666_11325653	Not Available	537	Open in IMG/M
3300005341\|Ga0070691_10550041	Not Available	674	Open in IMG/M
3300005353\|Ga0070669_102026521	Not Available	503	Open in IMG/M
3300005441\|Ga0070700_101404447	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005713\|Ga0066905_100941026	Not Available	759	Open in IMG/M
3300005718\|Ga0068866_10850032	Not Available	638	Open in IMG/M
3300005719\|Ga0068861_101599255	Not Available	642	Open in IMG/M
3300005764\|Ga0066903_105283763	Not Available	683	Open in IMG/M
3300006175\|Ga0070712_100418425	Not Available	1110	Open in IMG/M
3300009553\|Ga0105249_12911860	Not Available	549	Open in IMG/M
3300010359\|Ga0126376_10956070	Not Available	853	Open in IMG/M
3300010362\|Ga0126377_13266903	Not Available	524	Open in IMG/M
3300010366\|Ga0126379_11027136	Not Available	929	Open in IMG/M
3300010376\|Ga0126381_100886156	Not Available	1284	Open in IMG/M
3300010399\|Ga0134127_13105425	Not Available	542	Open in IMG/M
3300011119\|Ga0105246_11151007	Not Available	711	Open in IMG/M
3300012951\|Ga0164300_10203372	Not Available	972	Open in IMG/M
3300012955\|Ga0164298_11641022	Not Available	508	Open in IMG/M
3300012958\|Ga0164299_10641243	Not Available	733	Open in IMG/M
3300012958\|Ga0164299_11089526	Not Available	596	Open in IMG/M
3300012960\|Ga0164301_11825639	Not Available	512	Open in IMG/M
3300012971\|Ga0126369_11989592	Not Available	669	Open in IMG/M
3300012971\|Ga0126369_12362193	Not Available	618	Open in IMG/M
3300012986\|Ga0164304_11515305	Not Available	555	Open in IMG/M
3300013306\|Ga0163162_10723030	Not Available	1116	Open in IMG/M
3300014969\|Ga0157376_12136967	Not Available	598	Open in IMG/M
3300015374\|Ga0132255_102266100	Not Available	828	Open in IMG/M
3300016319\|Ga0182033_10284814	Not Available	1357	Open in IMG/M
3300016319\|Ga0182033_11300113	Not Available	653	Open in IMG/M
3300016341\|Ga0182035_11449140	Not Available	617	Open in IMG/M
3300016341\|Ga0182035_11489951	Not Available	609	Open in IMG/M
3300016341\|Ga0182035_11517959	Not Available	603	Open in IMG/M
3300016387\|Ga0182040_11737330	Not Available	533	Open in IMG/M
3300016404\|Ga0182037_10692558	Not Available	872	Open in IMG/M
3300018469\|Ga0190270_13310508	Not Available	511	Open in IMG/M
3300021560\|Ga0126371_11671989	Not Available	761	Open in IMG/M
3300021560\|Ga0126371_11922621	Not Available	710	Open in IMG/M
3300021560\|Ga0126371_12821486	Not Available	589	Open in IMG/M
3300025916\|Ga0207663_11016335	Not Available	665	Open in IMG/M
3300028819\|Ga0307296_10095187	Not Available	1594	Open in IMG/M
3300031543\|Ga0318516_10031284	Not Available	2811	Open in IMG/M
3300031543\|Ga0318516_10810861	Not Available	528	Open in IMG/M
3300031544\|Ga0318534_10014766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4018	Open in IMG/M
3300031544\|Ga0318534_10562987	Not Available	649	Open in IMG/M
3300031561\|Ga0318528_10246794	Not Available	957	Open in IMG/M
3300031572\|Ga0318515_10238089	Not Available	976	Open in IMG/M
3300031679\|Ga0318561_10482513	Not Available	682	Open in IMG/M
3300031713\|Ga0318496_10244740	Not Available	988	Open in IMG/M
3300031713\|Ga0318496_10818056	Not Available	513	Open in IMG/M
3300031719\|Ga0306917_10171981	Not Available	1623	Open in IMG/M
3300031719\|Ga0306917_10985746	Not Available	658	Open in IMG/M
3300031724\|Ga0318500_10018084	Not Available	2642	Open in IMG/M
3300031736\|Ga0318501_10072953	Not Available	1662	Open in IMG/M
3300031744\|Ga0306918_10434056	Not Available	1025	Open in IMG/M
3300031747\|Ga0318502_10840120	Not Available	557	Open in IMG/M
3300031748\|Ga0318492_10437188	Not Available	690	Open in IMG/M
3300031748\|Ga0318492_10477227	Not Available	660	Open in IMG/M
3300031763\|Ga0318537_10227832	Not Available	692	Open in IMG/M
3300031764\|Ga0318535_10466360	Not Available	562	Open in IMG/M
3300031769\|Ga0318526_10145437	Not Available	963	Open in IMG/M
3300031770\|Ga0318521_10020059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3104	Open in IMG/M
3300031778\|Ga0318498_10040865	Not Available	2038	Open in IMG/M
3300031778\|Ga0318498_10436650	Not Available	580	Open in IMG/M
3300031782\|Ga0318552_10442668	Not Available	663	Open in IMG/M
3300031793\|Ga0318548_10213423	Not Available	948	Open in IMG/M
3300031794\|Ga0318503_10273484	Not Available	548	Open in IMG/M
3300031794\|Ga0318503_10311943	Not Available	511	Open in IMG/M
3300031795\|Ga0318557_10084284	Not Available	1389	Open in IMG/M
3300031805\|Ga0318497_10011412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4120	Open in IMG/M
3300031805\|Ga0318497_10406522	Not Available	762	Open in IMG/M
3300031819\|Ga0318568_10452471	Not Available	800	Open in IMG/M
3300031833\|Ga0310917_10305779	Not Available	1076	Open in IMG/M
3300031879\|Ga0306919_10401417	Not Available	1051	Open in IMG/M
3300031880\|Ga0318544_10055240	Not Available	1441	Open in IMG/M
3300031897\|Ga0318520_10560209	Not Available	709	Open in IMG/M
3300031910\|Ga0306923_11521321	Not Available	699	Open in IMG/M
3300031910\|Ga0306923_11784609	Not Available	632	Open in IMG/M
3300031941\|Ga0310912_10314082	Not Available	1214	Open in IMG/M
3300031941\|Ga0310912_10434028	Not Available	1023	Open in IMG/M
3300031945\|Ga0310913_10822251	Not Available	655	Open in IMG/M
3300031954\|Ga0306926_10249298	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300031954\|Ga0306926_12988291	Not Available	505	Open in IMG/M
3300031959\|Ga0318530_10057055	Not Available	1483	Open in IMG/M
3300032001\|Ga0306922_11648554	Not Available	636	Open in IMG/M
3300032010\|Ga0318569_10022065	Not Available	2570	Open in IMG/M
3300032025\|Ga0318507_10364468	Not Available	630	Open in IMG/M
3300032035\|Ga0310911_10630288	Not Available	622	Open in IMG/M
3300032041\|Ga0318549_10266898	Not Available	771	Open in IMG/M
3300032043\|Ga0318556_10738324	Not Available	512	Open in IMG/M
3300032052\|Ga0318506_10561480	Not Available	505	Open in IMG/M
3300032059\|Ga0318533_10621283	Not Available	793	Open in IMG/M
3300032063\|Ga0318504_10013794	Not Available	2891	Open in IMG/M
3300032066\|Ga0318514_10404496	Not Available	725	Open in IMG/M
3300032068\|Ga0318553_10141453	Not Available	1243	Open in IMG/M
3300032076\|Ga0306924_11418833	Not Available	740	Open in IMG/M
3300032076\|Ga0306924_12021386	Not Available	593	Open in IMG/M
3300032089\|Ga0318525_10219046	Not Available	978	Open in IMG/M
3300032261\|Ga0306920_100067391	All Organisms → cellular organisms → Bacteria → Proteobacteria	5238	Open in IMG/M
3300033290\|Ga0318519_10128192	Not Available	1396	Open in IMG/M
3300033290\|Ga0318519_10178857	Not Available	1200	Open in IMG/M
3300033290\|Ga0318519_10412664	Not Available	805	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.82%
Host-Associated	Host-Associated	8.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.82%
Plants	Host-Associated → Plants	8.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.82%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	61.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1019141961	3300000364	Soil	MQLPMLKNTVPASLDGQSIEAFIRNSTQNLQRMSAAMPGSGIAGAVYLGFDGTKGVWKLNKEAVDPKSLGRILVPQHGLFEGYIEWANSSPLQ
INPhiseqgaiiFebDRAFT_1019166071	3300000364	Soil	MHLPALKNSTPASIDGQSIEDFIRNSTRNLQQVAAAMPGSGVAGAVYLGFDGTKGEWKLNREPIDPKSLGRILVPQHGLFEGYIEWANSSPLQK
JGI1027J12803_1071552901	3300000955	Soil	MYLPALKNSTPASIDGRSIEDFIRNSTRNLQHVAAAMPGSGVAGAVYLGFDGTKGEWKLNREPIDPKSLGRILVPQHGLFEGYIEWANSSPLQKIQRQLLGVAYDEPMS
Ga0066395_102084922	3300004633	Tropical Forest Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYDEPMTEHLLPKPLS
Ga0066395_110075851	3300004633	Tropical Forest Soil	MLLPTLKNAVPASLSDGQSIEDFIRNSTQNLQRAAAAMPGSGIAGAVYLGFDGTNGAWKLNREVVDPKSLGRILVPQHGLFEG
Ga0066388_1000631141	3300005332	Tropical Forest Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAAMPGSGVAGAVYLGFDGTTGVWKLNKEAIDPKGLGRILVPQHGLFEGYIEWANGSPLQKTQRQLLGV
Ga0066388_1016230042	3300005332	Tropical Forest Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSP
Ga0066388_1067887761	3300005332	Tropical Forest Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSP
Ga0070666_113256532	3300005335	Switchgrass Rhizosphere	MQLPALQNAVPASLIDGQSIEDFIRNSTQNLQHMASAMPGSGVAGAVYLGFDGMNGAWKLNREVVDPKSLGRILVPQHGLFEGYIEWANSSPLQKIKRQLLG
Ga0070691_105500411	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MLLPALKNATPPSIDGQSLEDFIRNSTRNLQNVAAAMPGSGVAGAVYLGFDGTNGAWKLNREPIDPKSLGRILVPQHGLFEGFIEWANSSPLQKIQRQLLGV
Ga0070669_1020265211	3300005353	Switchgrass Rhizosphere	MQLPALQNAVPASLIDGQSIEDFIRNSTQNLQHMASAMPGSGVAGAVYLGFDGMNGAWKLNREVVDPKSLGRILVPQHGLFEGYIEWANSSPLQKIKRQLLGVHYD
Ga0070700_1014044472	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLLPALKNAVPASLIDGQSIEDFIRNSTQNLQRVAGAMPGSGVAGAVYLGFDGANGVWKLNKEVVDAKSIGRILVPQHGLFE
Ga0066905_1009410262	3300005713	Tropical Forest Soil	MQLPALKNAVPASLGDGQSIEDFIRNSTQNLQRAAATMPGGDAGTVYLDFDGTKGTWKLNKEVVDPKSLGRILVPQHGLFEGCTEWANGSALQRIRRPLLGVHYDEPMSERLLEKPLSP
Ga0068866_108500321	3300005718	Miscanthus Rhizosphere	MQLPALQNAVPASLIDGQSIEDFIRNSTQNLQHMASAMPGSGVAGAVYLGFDGMNGAWKLNREVVDPKSLGRILVPQHGLFEGYIEWANSSPLQKIKRQLLGVHYDEPMSERLLQKPLSPNAY
Ga0068861_1015992552	3300005719	Switchgrass Rhizosphere	MHLPALKSSTPASIDGQSIEDFIRNSTRNLQHVAAAMPGSGITGAVYLRFDGTTGVWKLNKEPVDPKSLGRILVPQHG
Ga0066903_1052837632	3300005764	Tropical Forest Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGIAGVVYLGFDGTTGIWRLNKEAVDPKGLGRILVPQHGLFEGCIEWAGGSPLQRV
Ga0070712_1004184252	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLLPALKNSVPASLIDGQSIEDFIRNSVQNLQRTAASVPGSGIAGAVYLGFNGNTGEWKLNREAVDPKSLGRILVPQH
Ga0105249_129118601	3300009553	Switchgrass Rhizosphere	MHLPSLKNSTPASLDGRSVEDFIRNSTQNLQRMSAAMPGSGVAGAVYLGFDGTSGVWKLNKEVVDPKSLGRILV
Ga0126376_109560701	3300010359	Tropical Forest Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAIDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQR*
Ga0126377_132669031	3300010362	Tropical Forest Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAAMPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLVGGVIEWANGSPLQKIQRQLLGI
Ga0126379_110271362	3300010366	Tropical Forest Soil	MQLPALRNSVSASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLF
Ga0126381_1008861562	3300010376	Tropical Forest Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGIAGVVYLGFDGTTGIWKLNKEAIDPKGLGRILVPQHGLFEGCIEWA
Ga0134127_131054252	3300010399	Terrestrial Soil	MLLPALKNAVPASLIDGQSIEDFIRNSTQNLQRMSAAMPGSGIAGAVYLGFDGTRGVFKLNREVVDAKSLGRILVPQHGLFEGCIEWANSSPLQKVQRQLLGVHYDEPMSERLLPKPLSPNAY
Ga0105246_111510072	3300011119	Miscanthus Rhizosphere	MQLPALQNAVPASLIDGQSIEDFIRNPTQNLQRVAGAMPGSGVAGAVYLGFDGMNGAWKLNREVVDPKSLGRILVPQHGLFEGYIEWANSSPLQKIQRQLLGVHYDEPMSERLLQ
Ga0164300_102033721	3300012951	Soil	MLLPALKNAVPASLIDGQSIEDFIRNSTQNLQRMSAAMPGSGIAGAVYLGFDGTSGVFKLNREPVDPKSLGRILVPQHGLFEGCIEWASSSPLQKIQRQLLG
Ga0164298_116410222	3300012955	Soil	MSTIMQLPALQNAVPASLIDGQSIEDFIRNSTQNLQHMASAMPGSGVAGAVYLGFDGMNGAWKLNREVVDPKSLGRILVPQHGLFEGYIEWANSS
Ga0164303_112314622	3300012957	Soil	EDYIRNATQNLRNVAAAMPGGGSGVAGAVYLGFNGNTGTWTLNKETVDPKSLGRILVPEHGMYEGMIEWANGSPLQKCQRPLRGVTHAEPMTEGCC*
Ga0164299_106412431	3300012958	Soil	MHLPALKNSTPASIDGQSIEDFIRNSTQNLQRVAGAMPGSGVAGAVYLGFDGTTGVWKLNKEPVDPKSLGRILVPQHGLFEGYIEWANGSPLQKVQRQLLG
Ga0164299_110895261	3300012958	Soil	MHLPALKNSTPASIDGQSIEDFIRNSTRNLQHVAAAMPGSGVAGAVYLGFDGTSGVWKLNREPIDPKGLGRILVPQHGLFEGYIEWANSSPLQKIQRQLLG
Ga0164301_118256392	3300012960	Soil	MLLPALKNAVPASLIDGQSIEDFIRNSTQNLQRMSAAMPGSGIAGAVYLGFDGTRGVFKLNREVVDAKSLGRILVPQHGLFEGCKEWANSSPLQQIQRQLLG
Ga0126369_119895921	3300012971	Tropical Forest Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAAMPGSGVAGAVYLGFDGTTGVWKLNKVAVDPKGLGRILVPQHGLFEGCIEWANSSPLQKIQRQLLGVHYDEP
Ga0126369_123621931	3300012971	Tropical Forest Soil	MQLPALRNSVSASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAIYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLG
Ga0164304_115153051	3300012986	Soil	MLLPALKNSVPTSIDGQSIEDFIRNSTRNLQHVAAAMPGSGVAGAVYLGFDGTSGAWKLNKEAVDPKSLGRILVPQHGL
Ga0163162_107230301	3300013306	Switchgrass Rhizosphere	MHLPVLKNTVPASLDGMSLEDYIRNATNNLRNVAAAMPGGGSGFTGAVYLGFNGNTGKWTLNKETVDPKSLGRILVPEHGMYEGMIE
Ga0157376_121369672	3300014969	Miscanthus Rhizosphere	MQLPALQNAVPASLIDGQSIEDFIRNSTQNLQHMASAMPGSGVAGAVYLGFDGMNGAWKLNREVVDPKSLGRILVPQHGLFEGYIEWANSSPLQKIKRQLLGVHYDEPMSEQLLPK
Ga0132255_1022661002	3300015374	Arabidopsis Rhizosphere	MQLPSLMNTVPASLNGMSIEDFIRNSTKNLQRVAGAMPGGGAGTAYLDFDGTTGRWKLHKEAVDPKSLGRILVPPLSMFEGCIEWANGS
Ga0182033_102848142	3300016319	Soil	MYLPALRNSVPASLDGMSIEDYIKNATRNLQNVAAAMPGGGSGVAGAVYLGFNGNTGAWKLNKEIVDPKSLGRILVPEHGMYEGMVE
Ga0182033_113001131	3300016319	Soil	MLLPALNDASSISLIDGMSIEDFIRNSVQNLQRISAAMPGSNGAVYLGFDGTSGAWKLNREPVEPKSLGRILVPQHGLFEGCIEWANSSPLQKTHRQ
Ga0182035_114491401	3300016341	Soil	MQLPALKNAVPVSLIDGQSIEDFIRNSTKNLQRVADAMPGGGGAGAIYLGFDGTTGVWKLNKEVVDPKSLGRILVPQHGLFEGVIEWANSSPLQKIQRQLLGVAYDEPMSERLLKKPLSPQAYRK
Ga0182035_114899511	3300016341	Soil	MQLPALKNAVPASLIDGQTIEDFIRNSTANLQRMSTAMPGSGIAGAVYLRFDGTTGKWKLDKEVVDAKSLGRILVPQHGLFEGCIEWANSSPL
Ga0182035_115179592	3300016341	Soil	MQLPALQNAVPASLINGQSIEDFIRNSTQNLQRMASAMPGSGVAGAVYLGFDGTNGAWKLNREVVDPKSLGRILVPQHGLFEGYIEWANSSPLQKIKRQLLGVHYDEPMSE
Ga0182040_117373302	3300016387	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHY
Ga0182037_106925582	3300016404	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYI
Ga0190270_133105081	3300018469	Soil	MQLPALRNSVPASLIEGQSIEDFIRNSTQNLQRTAAAMPGSGIAGAVYLGFDGTSGKWKLNREVVDPKSLGRILVPQHGLF
Ga0126371_116719891	3300021560	Tropical Forest Soil	MYLPALRNSVPASLDGMSIEDYIKNATRNLQNVAAAMPGGGGVTGAVYLGFNGNTGAWKLNKEIVDPKSLGRILVPEHGM
Ga0126371_119226211	3300021560	Tropical Forest Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAAMPGSGVAGAVYLGFDGTTGVWKLNKEAVDLKGLGRILVPQHGLFEGYIE
Ga0126371_128214861	3300021560	Tropical Forest Soil	MQLPALKNAVPASLDGQSIEDFIRNSTQNLQRMSATMPGSGIAGAVYLGFDGTTGKWKFNKEEVADPKSLGRIVVPQHGL
Ga0207663_110163351	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MHLPALKNTVPASLDGMSLEDYIRNATQNLRNVAAAMPGSGSGVTGADYLGFNGNTGKWTLNKEVVDPKSLGRILVPEHSLFEGMIEWANGQRLQKCQRPLRGVKNAEP
Ga0307296_100951871	3300028819	Soil	MQLPMLKNAVPASLIDGQSIEDFIRNSTQNLQQMSAAMPGSGIAGAVYLGFDGTSGVFKLNREVVDAKSLGRILVPQHGLFEGYIEWANSTPLQKIQ
Ga0318516_100312843	3300031543	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKTQRQLLGVHYD
Ga0318516_108108612	3300031543	Soil	MYLPALRNSVPASLDGMSIEDYIKNATRNLQNVAAAMPGGGSGVAGAVYLGFNGNTGAWKLNKEIVDPKSLGRILVPEHGMYE
Ga0318534_100147666	3300031544	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTQNLQRMSAGMPGSGIAGAAYLGFNGTSGAWKLDREEVDPKSLGRILVPQHGLFEGCIEWANSSPLQKIQRQLLGIHYDEPMS
Ga0318534_105629872	3300031544	Soil	MYLPALRNSVPASLDGMSIEDYIKNATRNLQNVAAAMPGGGSGVTGAVYLGFNGNTGAWKLNKEIVDPKSLGRILV
Ga0318528_102467942	3300031561	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFE
Ga0318515_102380892	3300031572	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYDEPMTEHLLL
Ga0318561_104825132	3300031679	Soil	MQLPALQNAVPASLINGQSIEDFIRNSTQNLQRMASAMPGSGVAGAVYLGFDGTNGAWKLNREVVDPKSLGRILVPQHGLFEGY
Ga0318496_102447401	3300031713	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGS
Ga0318496_108180562	3300031713	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYDEPM
Ga0306917_101719811	3300031719	Soil	MHLPALRTSVPASLDGMSIEDYIKNATRNLQNVAAAMPGGGSGVAGAVYLGFNGNTGAWKLNKEIVDPKSLGRILVPEHGMYEGMVEWANGSPLQKCQRPLRGVAYDEPMTERLLKKPLS
Ga0306917_109857462	3300031719	Soil	MQLPALKNAVPASLIDGQTIEDFIRNSTANLQRMSTAMPGSGIAGAVYLRFDGTTGKWKLDKEVVDAKSLGRILVPQHGLFEGCIE
Ga0318500_100180843	3300031724	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTQNLQRMSAGMPGSGIAGAAYLGFNGTSGAWKLDREEVDPKSLGRILVPQHGLFEGCIEWANSSPLQKIQRQLLGIH
Ga0318501_100729531	3300031736	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEG
Ga0306918_104340561	3300031744	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYDEPMTE
Ga0318502_108401202	3300031747	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYDEPMTEH
Ga0318492_104371882	3300031748	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKVQR
Ga0318492_104772272	3300031748	Soil	MQLPALQNAVPASLINGQSIEDFIRNSTQNLQRMASAMPGSGVAGAVYLGFDGTNGAWKLNREVVDPKSLGRILVPQHGLFEGYIEWANSSPLQKIKRQLLG
Ga0318537_102278321	3300031763	Soil	MQLPALRNSVSTSLNGQSIEEFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGAYKLNKEVVDPKGLGRILVPQHGLFEGY
Ga0318535_104663602	3300031764	Soil	MQLPALRNSVSTSLNGQSIEEFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGAYKLNKEVVDPKGLGRILVPQHGLFEGYIEWANGSPLQK
Ga0318526_101454372	3300031769	Soil	MQLPALQNAVPASLINGQSIEDFIRNSTQNLQRMASAMPGSGVAGAVYLGFDGTNGAWKLNREVVDPKSLGRILVPQHGLF
Ga0318521_100200591	3300031770	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKVQRQLLGVHYDEPMTEHLLSKPLSPGAYK
Ga0318498_100408653	3300031778	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTQNLQRMSAGMPGSGIAGAAYLGFNGTSGAWKLDREEVDPKSLGRILVPQHGLFEGCIEWANSSPLQKIQRQLLGIHYDEPISE
Ga0318498_104366501	3300031778	Soil	MQLPALQNAVPASLINGQSIEDFIRNSTQNLQRMASAMPGSGVAGAVYLGFDGTNGAWKLNREVVDPKSLGRILVPQHGLFEGYIEWANSSPLQKIKRQLLGVHYDEPMSEQLLPKPLSPNAYR
Ga0318552_104426682	3300031782	Soil	MQLPALQNAVPASLINGQSIEDFIRNYTQNLQRMASAMPGSGVAGAVYLGFDGANGAWKLNREVVDPKSLGRILVPQHGLFEGCIE
Ga0318548_102134232	3300031793	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIE
Ga0318503_102734842	3300031794	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYDEPMTEHLLPKPL
Ga0318503_103119431	3300031794	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTQNLQRMSAGMPGSGIAGAAYLGFNGTSGAWKLDREEVDPKSLGRILVPQHGLFEGCIEWANSSPLQKIQRQLLGIHYDEPMSERLLPKPLSPNA
Ga0318557_100842843	3300031795	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTKNLQQVAGAMPGTGVAGAVYLGFNGTSGEWKLNREVIDPKSVGRILVPQHGLFE
Ga0318497_100114121	3300031805	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTQNLQRMSAGMPGSGIAGAAYLGFNGTSGAWKLDREEVDPKSLGRILVPQHG
Ga0318497_104065221	3300031805	Soil	MQLPALQNAVPASLIDGQSIEDFIRNSTQNLQRMASAMPGSGVAGAVYLGFDGTNGAWKLNREEVDPKSLGRILVPQHGLFEGYIEWANSSPLQKIKRQLLGVHYDEPMSEQLLPKPLSPNAYR
Ga0318568_104524712	3300031819	Soil	MQLPALQNAVPASLINGQSIEDFIRNSTQNLQRMASAMPGSGVAGAVYLGFDGTNGAWKLNREVVDPKSLGRILVPQHGLFE
Ga0310917_103057792	3300031833	Soil	MHLPALRTSVPASLDGMSIEDYIKNATRNLQNVAAAMPGGGSGVAGAVYLGFNGNTGAWKLNKEIVDPKSLGRILVPEHGMYEGMV
Ga0306919_104014171	3300031879	Soil	MQLPALRNSVSTSLNGQSIEEFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGAYKLNKEVVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLL
Ga0318544_100552403	3300031880	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKVQRQLL
Ga0318520_105602091	3300031897	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWAN
Ga0306923_115213211	3300031910	Soil	MQLPALKNAVPASLIDGQTIEDFIRNSTANLQRMSTAMPGSGIAGAVYLRFDGTTGKWKLDKEVVDAKSLGRILVPQHGLFEGCIEWANSSPLQ
Ga0306923_117846091	3300031910	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYDEPMTEHLLP
Ga0310912_103140821	3300031941	Soil	MQLPALRNSVSTSLNGQSIEEFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGAYKLNKEVVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVH
Ga0310912_104340281	3300031941	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQR
Ga0310913_108222512	3300031945	Soil	MQLPALKNAVPASLIDGQTIEDFIRNSTANLQRMSTAMPGSGIAGAVYLRFDGTTGKWKLDKEVVDAKSLGRILVPQHGLFEGCIEWANSSPLQKIQRQLLGVH
Ga0306926_102492981	3300031954	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYDEPMTEHLLPKPLSP
Ga0306926_129882912	3300031954	Soil	MQLPALKNAVPASFIDGQSIEDFIRNSTQNLQRMAAAMPGSGVAGAVYLGFDGTTGKWKLNKEVVDPKSLGRILVPQH
Ga0318530_100570553	3300031959	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEG
Ga0306922_116485542	3300032001	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYDEPMT
Ga0318569_100220651	3300032010	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTQNLQRMSAGMPGSGIAGAAYLGFNGTSGAWKLDREEVDPKSLGRILVPQHGLFEGCIEWANSSPLQ
Ga0318507_103644681	3300032025	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTKNLQQVAGAMPGTGVAGAVYLGFNGTSGEWKLNREVIDPKSVGRILVPQHS
Ga0310911_106302881	3300032035	Soil	MHLPALRTSVPASLDGMSIEDYIKNATRNLQNVAAAMPGGGSGVAGAVYLGFNGNTGAWKLNKEIVDPKSLGRILVPEHGMYEGMVEWANGSPLQKCQRPLRGVAYDEP
Ga0318549_102668981	3300032041	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTKNLQQVAGAMPGTGVAGAVYLGFNGTSGEWKLNREVIDPKSVGRILVPQHGLFEGCIEWANSSPLQKIQRQLLGVHHDEPMSERLLPK
Ga0318556_107383241	3300032043	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTKNLQQVAGAMPGTGVAGAVYLGFNGTSGEWKLNREVIDPKSVGRILVPQHGLFEGCIEWANSSPLQKIQRQLLGVH
Ga0318506_105614802	3300032052	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFE
Ga0318533_106212831	3300032059	Soil	MQLPALKNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAIDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYD
Ga0318504_100137941	3300032063	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKVQRQLLGVHYD
Ga0318514_104044962	3300032066	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKVQRQLLGVHYDEPMTEHLLSKPL
Ga0318553_101414531	3300032068	Soil	MQLPALRNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQK
Ga0306924_114188332	3300032076	Soil	MQLPALKNAVPASLIDGQTIEDFIRNSTANLQRMSTAMPGSGIAGAVYLRFDGTTGKWKLDKEVVDAKSLGRILVPQHGLFEGCIEWANSSP
Ga0306924_120213861	3300032076	Soil	MQLPALRNSVPTSLNGQSIEDFIRNSTQNLQRAAAALPGSGLAGAVYLGFDGTTGVWKLNKEAVDPKGLGRILVPQHGLFEGYIEWANGSPLQKIQRQLLGVHYDEPMT
Ga0318525_102190461	3300032089	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTQNLQRMSAGMPGSGIAGAAYLGFNGTSGAWKLDREEVDPKSLGRILVPQHGLFEGCIEWANSSPLQKIQ
Ga0306920_1000673911	3300032261	Soil	MQLPALKNSVPASLNGQSIEDFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGVWKLNKEAIDPKGLGRILVPQHGLFEGY
Ga0318519_101281922	3300033290	Soil	MASAMPGSGVAGAVYLGFDGTNGAWKLNREVVDPKSLGRILVPQHGLFEGYIEWANSSPLQKIKRQLPGVHYDEPMSEQLLPKPLSPNAYR
Ga0318519_101788571	3300033290	Soil	MQLPALKNAVPASLIDGQSIEDFIRNSTKNLQQVAGAMPGTGVAGAVYLGFNGTSGEWKLNREVIDPKSVGRILVPQHGLFEGCIEWANSSPLQKIQRQLLVVV
Ga0318519_104126641	3300033290	Soil	MQLPALRNSVSTSLNGQSIEEFIRNSTQNLQRAAAALPGSGVAGAVYLGFDGTTGAYKLNKEVVDPKGLGRILVPQHGLFEGYIEWANG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087565

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences