Metagenome / Metatranscriptome Family F087551

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087551
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	99 residues
Representative Sequence	QLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.06 %
% of genes near scaffold ends (potentially truncated)	82.73 %
% of genes from short scaffolds (< 2000 bps)	83.64 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.909 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.000 % of family members)
Environment Ontology (ENVO)	Unclassified (42.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.0: automated matches	d5mjza_	5mjz	0.61572
a.118.8.1: Tetratricopeptide repeat (TPR)	d1fcha_	1fch	0.59161
a.7.2.1: Enzyme IIa from lactose specific PTS, IIa-lac	d1e2aa_	1e2a	0.57438
c.1.8.0: automated matches	d4gvfa_	4gvf	0.57341
a.47.4.1: CAPPD, an extracellular domain of amyloid beta A4 protein	d3umha_	3umh	0.57189

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF04679	DNA_ligase_A_C	11.82
PF02211	NHase_beta	9.09
PF10094	DUF2332	9.09
PF11238	DUF3039	7.27
PF00027	cNMP_binding	7.27
PF00579	tRNA-synt_1b	4.55
PF00582	Usp	3.64
PF00196	GerE	1.82
PF04851	ResIII	1.82
PF02545	Maf	1.82
PF12697	Abhydrolase_6	1.82
PF00857	Isochorismatase	1.82
PF08220	HTH_DeoR	0.91
PF02423	OCD_Mu_crystall	0.91
PF00155	Aminotran_1_2	0.91
PF13189	Cytidylate_kin2	0.91
PF13401	AAA_22	0.91
PF02979	NHase_alpha	0.91
PF00561	Abhydrolase_1	0.91
PF08245	Mur_ligase_M	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	11.82
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.55
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.55
COG0424	7-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamily	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.82
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.82
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.82
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
All Organisms	root	All Organisms	49.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
cellular organisms	root	All Organisms → cellular organisms	49.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.45 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.27 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.91 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.18 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	11.82 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.82 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.91 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	0.91 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	6.36 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	6.36 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	1.82 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.91 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.91 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	6.36 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1.82 %
Rhodococcus oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus oryzae	0.91 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10086656	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300005339\|Ga0070660_101479737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300005343\|Ga0070687_100021157	All Organisms → cellular organisms → Bacteria	3052	Open in IMG/M
3300005363\|Ga0008090_14737396	Not Available	595	Open in IMG/M
3300005365\|Ga0070688_100346307	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300005366\|Ga0070659_101001668	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300005435\|Ga0070714_100995873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815	Open in IMG/M
3300005437\|Ga0070710_10109815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1655	Open in IMG/M
3300005439\|Ga0070711_101024334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300005467\|Ga0070706_100942235	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005545\|Ga0070695_100459237	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300005563\|Ga0068855_100534561	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1271	Open in IMG/M
3300005719\|Ga0068861_100610520	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300006175\|Ga0070712_100835790	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300006237\|Ga0097621_100822725	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300009101\|Ga0105247_10712983	Not Available	756	Open in IMG/M
3300009176\|Ga0105242_10536270	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1119	Open in IMG/M
3300009545\|Ga0105237_12380355	Not Available	540	Open in IMG/M
3300010360\|Ga0126372_11568113	Not Available	696	Open in IMG/M
3300010373\|Ga0134128_11694816	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300010375\|Ga0105239_13110571	Not Available	540	Open in IMG/M
3300010396\|Ga0134126_13032272	Not Available	507	Open in IMG/M
3300013104\|Ga0157370_11007345	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300013105\|Ga0157369_12642925	Not Available	507	Open in IMG/M
3300013296\|Ga0157374_11237948	Not Available	768	Open in IMG/M
3300013296\|Ga0157374_12766312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus oryzae	518	Open in IMG/M
3300014495\|Ga0182015_10348998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	961	Open in IMG/M
3300016270\|Ga0182036_11055661	Not Available	671	Open in IMG/M
3300016294\|Ga0182041_10397293	Not Available	1172	Open in IMG/M
3300016357\|Ga0182032_11744519	Not Available	543	Open in IMG/M
3300016371\|Ga0182034_11419717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	607	Open in IMG/M
3300016387\|Ga0182040_10692098	Not Available	833	Open in IMG/M
3300016387\|Ga0182040_11522776	Not Available	568	Open in IMG/M
3300017792\|Ga0163161_10189143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1582	Open in IMG/M
3300020581\|Ga0210399_10371594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1193	Open in IMG/M
3300021171\|Ga0210405_11133488	Not Available	583	Open in IMG/M
3300021180\|Ga0210396_10067573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3256	Open in IMG/M
3300021402\|Ga0210385_10863885	Not Available	694	Open in IMG/M
3300021404\|Ga0210389_10098847	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300021405\|Ga0210387_10268173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1496	Open in IMG/M
3300021479\|Ga0210410_10913575	All Organisms → cellular organisms → Bacteria → Terrabacteria group	765	Open in IMG/M
3300022467\|Ga0224712_10056671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1546	Open in IMG/M
3300025898\|Ga0207692_10072690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1817	Open in IMG/M
3300025906\|Ga0207699_10256934	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1206	Open in IMG/M
3300025910\|Ga0207684_10793920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	800	Open in IMG/M
3300025915\|Ga0207693_10206667	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1544	Open in IMG/M
3300025918\|Ga0207662_10011203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	4966	Open in IMG/M
3300025919\|Ga0207657_11518455	Not Available	500	Open in IMG/M
3300025920\|Ga0207649_11331557	Not Available	568	Open in IMG/M
3300025927\|Ga0207687_11851560	Not Available	516	Open in IMG/M
3300025929\|Ga0207664_10381246	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1252	Open in IMG/M
3300025929\|Ga0207664_11511014	Not Available	593	Open in IMG/M
3300025932\|Ga0207690_11572385	Not Available	550	Open in IMG/M
3300025949\|Ga0207667_10523553	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1201	Open in IMG/M
3300026023\|Ga0207677_10272119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1386	Open in IMG/M
3300026041\|Ga0207639_10112594	All Organisms → cellular organisms → Bacteria	2221	Open in IMG/M
3300026089\|Ga0207648_10799098	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	878	Open in IMG/M
3300026475\|Ga0257147_1032851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	750	Open in IMG/M
3300026494\|Ga0257159_1045162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	745	Open in IMG/M
3300028381\|Ga0268264_10401528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1317	Open in IMG/M
3300031544\|Ga0318534_10308466	Not Available	912	Open in IMG/M
3300031546\|Ga0318538_10578416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300031549\|Ga0318571_10037402	Not Available	1387	Open in IMG/M
3300031564\|Ga0318573_10093152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1537	Open in IMG/M
3300031572\|Ga0318515_10091932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1584	Open in IMG/M
3300031573\|Ga0310915_11025265	Not Available	575	Open in IMG/M
3300031680\|Ga0318574_10414112	Not Available	788	Open in IMG/M
3300031680\|Ga0318574_10927149	Not Available	510	Open in IMG/M
3300031681\|Ga0318572_10265594	Not Available	1011	Open in IMG/M
3300031713\|Ga0318496_10157254	Not Available	1242	Open in IMG/M
3300031715\|Ga0307476_10163670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1603	Open in IMG/M
3300031736\|Ga0318501_10356229	Not Available	786	Open in IMG/M
3300031764\|Ga0318535_10407153	Not Available	607	Open in IMG/M
3300031765\|Ga0318554_10282957	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300031768\|Ga0318509_10052293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2086	Open in IMG/M
3300031768\|Ga0318509_10291438	Not Available	913	Open in IMG/M
3300031768\|Ga0318509_10381246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	789	Open in IMG/M
3300031770\|Ga0318521_10799582	Not Available	575	Open in IMG/M
3300031777\|Ga0318543_10183973	Not Available	925	Open in IMG/M
3300031777\|Ga0318543_10188517	Not Available	914	Open in IMG/M
3300031781\|Ga0318547_10512630	Not Available	741	Open in IMG/M
3300031782\|Ga0318552_10746350	Not Available	500	Open in IMG/M
3300031831\|Ga0318564_10192918	Not Available	907	Open in IMG/M
3300031860\|Ga0318495_10053441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1790	Open in IMG/M
3300031896\|Ga0318551_10345929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	841	Open in IMG/M
3300031954\|Ga0306926_11901421	Not Available	672	Open in IMG/M
3300032001\|Ga0306922_10520214	Not Available	1267	Open in IMG/M
3300032001\|Ga0306922_11633725	Not Available	640	Open in IMG/M
3300032008\|Ga0318562_10292702	Not Available	946	Open in IMG/M
3300032010\|Ga0318569_10332847	Not Available	707	Open in IMG/M
3300032043\|Ga0318556_10231907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	962	Open in IMG/M
3300032052\|Ga0318506_10462135	Not Available	563	Open in IMG/M
3300032064\|Ga0318510_10291627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300032089\|Ga0318525_10020946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3104	Open in IMG/M
3300032180\|Ga0307471_100753634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300032180\|Ga0307471_100942233	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1031	Open in IMG/M
3300032261\|Ga0306920_103367094	Not Available	594	Open in IMG/M
3300033289\|Ga0310914_10989133	Not Available	741	Open in IMG/M
3300034820\|Ga0373959_0082325	Not Available	743	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.45%
Host-Associated	Host-Associated	24.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.45%
Plants	Host-Associated → Plants	24.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.18%
Roots	Host-Associated → Plants → Roots	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Loam	Environmental → Terrestrial → Soil → Loam	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.45%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.18%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.91%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_100866562	3300001471	Forest Soil	WQRLHGGAGMALALAGLGEVAAGGGQPLRAGQLLGAAQALLPETHPLLRVTMPYDLPARLAAARTASDPAAFDRGRAEGQDWTIDRAVAVGLASAAPE*
Ga0070660_1014797372	3300005339	Corn Rhizosphere	PLLTEALQAWQRLGGNAGMALALAGLGKLAASHGAPRRAGQLLGAGRALLPASDPLLHVIVPYNLPAQLAAARAHGDPAAFDRGLSEGQAWDIDRAVAAGLANPADPETDLE*
Ga0070687_1000211571	3300005343	Switchgrass Rhizosphere	ALAGLGEVAAGRGASRRAGQLLGAGQALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP*
Ga0008090_147373961	3300005363	Tropical Rainforest Soil	VAFALSGLGEVAAASGAPHRAGQLLGTGQALLPATDPLLHIVVPCDLSIRLAAARARGDTTAFDRGLAEGQNWTVDEAIAAGLASPAPESRDAQAGGGQAGNVRA*
Ga0070688_1003463073	3300005365	Switchgrass Rhizosphere	ALRAWQQLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGQALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP*
Ga0070659_1010016681	3300005366	Corn Rhizosphere	RAWQQLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP*
Ga0070714_1009958731	3300005435	Agricultural Soil	LLVEALRAWQQLGSTAGVAFALAGLGEVAAGRGASRRAGQLLGAGQALLPATDRLLRVVVPYDISARLTAARAGGDPAEFDRGLADGQTWDIDGAVAAGLADPSAR*
Ga0070710_101098151	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RGRPGMALALAGLGEVAADGGQPHRAGQLLGAAQALLPANHPLLRVNVPYDLPGRLAVARTRGDPAAFDRGLAEGQGWTIDRAVATGLTSTADPDVSLQ*
Ga0070711_1010243341	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	TEALRTWQQLRGRPGMALALAGLGEVAADGGQPHRAGQLLGAAQALLPANHPLLRVNVPYDLPGRLAVARTRGDPAAFDRGLAEGQGWTIDRAVATGLTSTADPDVSLQ*
Ga0070706_1009422351	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	QQLRSRPGMALALAGLGEVAANGGQPQRAGQLLGAARALLPATQNPLLRVTVPYDLPDRVAAARTRGDPASFDRGISEGKGWTVDRAVDAGLASAPRPPKTPAGSSETVDWNP*
Ga0070695_1004592371	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	QLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP*
Ga0068855_1005345611	3300005563	Corn Rhizosphere	TAGVAFALAGLGEVAAGRGASRRAGQLLGAGQALLPATDRLLRVVVPYDISARLTAARAGGDPAEFDRGLADGQTWDIDGAVAAGLADPSAR*
Ga0068861_1006105201	3300005719	Switchgrass Rhizosphere	LVEALRAWQQLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP*
Ga0070712_1008357901	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VAAGRGASRRAGQLLGAGPALLPATDRVARVVVPYDLSARLAAVRAGGDPAEFDRGLADGQSWDIGSAVTAGLAAPRAR*
Ga0097621_1008227253	3300006237	Miscanthus Rhizosphere	VAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP*
Ga0105240_109986481	3300009093	Corn Rhizosphere	AAGRGAPRRAGQLLGAGQALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP*
Ga0105247_107129833	3300009101	Switchgrass Rhizosphere	VAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQGWDIDSAVTAGLADP*
Ga0105242_105362702	3300009176	Miscanthus Rhizosphere	VAFALAGLGEVAAGRGASRRAGQLLGAGQALLPATDRLLRVVVPYDISARLTAARAGGDPAEFDRGLADGQTWDIDGAVAAGLADPSAR*
Ga0105237_123803552	3300009545	Corn Rhizosphere	AFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP*
Ga0126372_115681131	3300010360	Tropical Forest Soil	MAFALAGLGELAAVGGQPHRAGQLLGAAQALLPATHPLLHVIVPYDLPSRMAAARTRGDPAAFDRGLAEGQGWTIDRAVAAGSASAAGQ*
Ga0134128_116948162	3300010373	Terrestrial Soil	ALLVEALRAWQQLGSTAGVAFALAGLGEVAAGRGASRRAGQLLGAGQALLPATDRLLRVVVPYDISARLTAARAGGDPAEFDRGLADGQTWDIDGAVAAGLADPSAR*
Ga0105239_131105711	3300010375	Corn Rhizosphere	LRAWQQLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGQALLPATDRLVRVVVPYDISARLTAARAGGDPAEFDRGLADGQGWDIDSAVTAGLADP*
Ga0134126_130322721	3300010396	Terrestrial Soil	ALLVEALRAWQQLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP*
Ga0134122_100992941	3300010400	Terrestrial Soil	AAGRGAPRRAGQLLGAGQALLPATDRLVRVGVPYDMSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP*
Ga0126359_10561841	3300010869	Boreal Forest Soil	GLGEVAAGRGQPHRAGQLLGAGQALLPEASPLLRGIVPYELPARLAATRALGDPAAFDRGVAEGQAWTIDKAVAAGLASAADTGTDLE*
Ga0157370_110073451	3300013104	Corn Rhizosphere	TAGVAFALAGLGEVAAGRGAPRRAGQLLGAGQALLPATDRLLRVVVPYDISARLTAARAGGDPAEFDRGLADGQTWDIDGAVAAGLADPSAR*
Ga0157369_126429252	3300013105	Corn Rhizosphere	QLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP*
Ga0157374_112379483	3300013296	Miscanthus Rhizosphere	EALRAWQQLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGQALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQGWDIDSAAAAGLADP*
Ga0157374_127663122	3300013296	Miscanthus Rhizosphere	LVEALRAWQQLGSTAGVAFALAGLGEVAAGRGASRRAGQLLGAGQALLPATDRLLRVVVPYDMSARLTATRAGGDPAEFDRGLADGQAWDIDGAVAAGLAEGLADPSAR*
Ga0182015_103489982	3300014495	Palsa	LRAWQQPGSTAGVAFTLGGLGDVAAQPGAPRRAGQMLGAGRALLPPTNPLLRVIVPYDLPARLADARARGDPAAFDRGLAEGQTWDIDSAVAAGLADPADPDADPE*
Ga0182036_110556612	3300016270	Soil	HFWHELGSTAGAVFAFFGLGEVAAGRGAPHRAGQLLGAGQALLPATDPLLHMVVPYDLSARMAAARARGDATAFDGGLAEGQHWTVDEAMAAGLASYQE
Ga0182041_103972931	3300016294	Soil	MDDHPEPGQAFMSAPVTEHFWHELGSTAGAQFALFGLGEVAAGRGAPHRAGQLLGAGQALLPATDPLLHMVVPYDLSARLAAARARGDTTAFDGGLAEGQHWTVDEAMAAGLASPASPGTDLE
Ga0182033_107926511	3300016319	Soil	GLGEVAASSGVPQRAGQLLGAGQALLPATDPLLHMVVPYDLSARMAAARARGDATAFDGGLAEGQHWTVDEAMAAGLASYQE
Ga0182035_109604182	3300016341	Soil	VLALAGLGEAAAGSGQPHRAGQLLGAAQALLPATYPLLHVIVPYDLPGRLAAARTAGDPAAFDRGMADGQGWTIDRAVAAGLTSTADPGISLD
Ga0182032_117445192	3300016357	Soil	LIEALRAWQQLGSTAGMAFALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPNPGTDLE
Ga0182034_114197172	3300016371	Soil	GRAGMVLALAGLGEVAAASEQPHRAGQLLGAAQALLPATYPLLHVIVPYDLDGRLAGARTRGDPAAFDQGLAEGRDWTMDEAVDAGLASAPRPPKTPA
Ga0182040_106920982	3300016387	Soil	QLGSTAGVAFAIFGLGEVAAAGGTPHRAGQLLGASLALLPATDPLLHIVVPCDLSTRLTAARERGDRTAFDRGLAEGQTWTADEAIAAGLAG
Ga0182040_115227761	3300016387	Soil	NAGALLTEALRAWQQLRGRAGMVLALAGLGEAAAGSGQPHRAGQLLGAAQALLPATYPLLHVIVPYDLPGRLAAARTAGDPAAFDRGMADGQGWTIDRAVAAGLTSTADPGISLD
Ga0163161_101891434	3300017792	Switchgrass Rhizosphere	ALALAGLGKLAASHGAPRRAGQLLGAGRALLPASDPLLHVIVPYNPPAQLAAARAHGDPAAFDRGLSEGQAWDIDRAVAAGLANPADPETDLE
Ga0210399_103715943	3300020581	Soil	PGMALALAGLGEVAAAGGQAQPAGQLLGAARALLPATSNPLLRVTVPYDVPDRLAAARTRGDPAAFDRGLAEGQGWTIDRAVDAGLASAPRPPKTPAGSSETVD
Ga0210405_111334882	3300021171	Soil	GMALALAGLGEVAASHGAPRRAGQLLGAGRALLPATDPLLYVIVPYDLSTRLAAARARGDPAAFDRGLAEGQAWNIDSAVAAGLANPADPDADPN
Ga0210396_100675733	3300021180	Soil	VAFTLAGLGEVAAGRGTPRRAGQLLGAGRALLPAANPLRRGTVPYDVPARLAAARAAGDPAAFDRGLAEGQGWDIDRAVAAGLADPGALELTSEETRRDNGLPQRPGL
Ga0210385_108638851	3300021402	Soil	AGLGEVAADRGAPLRAGQLLGAGQALLPAADPLLRVIVPYDVSTRLAAARAGGDPAAFDRGLAEGQAWDIDRAVAAGLANPDGPDADLE
Ga0210389_100988473	3300021404	Soil	WQRLHGGAGIALALAGLGEVAAGGGQPLRAGQLLGAAQVLLPATNPLRRVTMPYDLPARLAEARTASDPAAFDRGLAEGQGWTIDRAVAVGLASAADPDADPE
Ga0210387_102681733	3300021405	Soil	GELLTEALRIWQQLRSRPGMALALAGLGEVAAAGGQAQPAGQLLGAARALLPATSNPLLRVTVPYDVPDRLAAARTRGDPAAFDRGLAEGQGWTIDRAVDAGLASAPRTPKTPAGSSETV
Ga0210410_109135751	3300021479	Soil	LAGLGEVAASHGTPRRAGQLLGAGRALLPASDPLLHVIVPYDLSTELAAARAGGDPAAFDRGLAEGQAWDIDSAVAAGLANPADPDADLE
Ga0224712_100566711	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	LVVEALRAWQQLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVIVPYDLSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP
Ga0207692_100726901	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EALRAWQQLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGEGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP
Ga0207699_102569342	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AGVAFALAGLGEVAAGRGASRRAGQLLGAGQALLPATDRLLRVVVPYDISARLTAARAGGDPAEFDRGLADGQTWDIDGAVAAGLADPSAR
Ga0207643_100537911	3300025908	Miscanthus Rhizosphere	AAGRGAPRRARQLLGAGQALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP
Ga0207684_107939203	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	QQLRSRPGMALALAGLGEVAANGGQPQRAGQLLGAARALLPATQNPLLRVTVPYDLPDRVAAARTRGDPASFDRGISEGKGWTVDRAVDAGLASAPRPPKTPAGSSETVDWNP
Ga0207693_102066671	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ALLVEALRAWQQLGSTAGVAFALAGLGEVAAGRGASRRAGQLLGAGQALLPATDRLLRVVVPYDISARLTAARAGGDPAEFDRGLADGQTWDIDGAVAAGLADPSAR
Ga0207662_100112038	3300025918	Switchgrass Rhizosphere	FALAGLGEVAAGRGAPRRAGQLLGEGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP
Ga0207657_115184551	3300025919	Corn Rhizosphere	PLLTEALQAWQRLGGNAGMALALAGLGKLAASHGAPRRAGQLLGAGRALLPASDPLLHVIVPYNLPAQLAAARAHGDPAAFDRGLSEGQAWDIDRAVAAGLANPADPETDLE
Ga0207649_113315572	3300025920	Corn Rhizosphere	GVAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP
Ga0207687_118515601	3300025927	Miscanthus Rhizosphere	ALLVEALRAWQQLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP
Ga0207664_103812462	3300025929	Agricultural Soil	LLVEALRAWQQLGSTAGVAFALAGLGEVAAGRGASRRAGQLLGAGQALLPATDRLLRVVVPYDISARLTAARAGGDPAEFDRGLADGQTWDIDGAVAAGLADPSAR
Ga0207664_115110142	3300025929	Agricultural Soil	LRAWQQLGSTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGQALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP
Ga0207690_115723852	3300025932	Corn Rhizosphere	FEALRAWQQLGGTAGVAFALAGLGEVAAGRGAPRRAGQLLGAGQALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGVADGQGWDIDSAAAAGLADP
Ga0207669_111928512	3300025937	Miscanthus Rhizosphere	ALAGLGKLAASHGSPRHAGQLLGAGRALLPASDPLLHVIVPYNLPAQLAAARAHGDPAAFDRGLSEGQAWDIDRAVAAGLANPADPETDLE
Ga0207667_105235532	3300025949	Corn Rhizosphere	STAGVAFALAGLGEVAAGRGASRRAGQLLGAGQALLPATDRLLRVVVPYDISARLTAARAGGDPAEFDRGLADGQTWDIDGAVAAGLADPSAR
Ga0207677_102721194	3300026023	Miscanthus Rhizosphere	AGMALALAGLGKLAASHGSPRHAGQLLGAGRALLPASDPLLHVIVPYNPPAQLAAARAHGDPAAFDRGLSEGQAWDIDRAVAAGLANPADPETDLE
Ga0207639_101125945	3300026041	Corn Rhizosphere	AGVAFALAGLGEVAAGRGAPRRAGQLLGAGQALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP
Ga0207648_107990981	3300026089	Miscanthus Rhizosphere	VWQRLGGNAGMALALAGLGKLAASHGAPRRAGQLLGAGRALLPASDPLLHVIVPYNPPAQLAAARAHGDPAAFDRGLSEGQAWDIDRAVAAGLANPADPETDLE
Ga0257147_10328513	3300026475	Soil	PGMALALAGLGEVAAGSGQAHPAGQLLGAAQALLPATQNPLLRVTVPYDLPDRVAAARTRGDPAAFDRGLAEGQGWTIDRAVDAGLASAPRPPKTPAGSSETVD
Ga0257159_10451621	3300026494	Soil	GLREVAADSGQAQPAGQLLGAARALLPATSNPLLRVTVPYDVPDRLAAARTRGDPAAFDRGLAEGQDWTIDRAVDAGLASAPRPPKTPAGSSETVDLDA
Ga0268264_104015284	3300028381	Switchgrass Rhizosphere	GVAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVVVPYDMSARLTAARAGGDPAEFDRGLADGQSWDIDSAVTAGLADP
Ga0318534_103084662	3300031544	Soil	MDDHPEPGQAFMSAPVTEHFWHELGSTAGAVFAFFGLGEVAAGRGAPHRAGQLLGAGQALLPATDPLLHMVVPYDLSARMAAARARGDATAFDGGLAEGQHWTVDEAMAAGLASYQE
Ga0318538_105784161	3300031546	Soil	LTEALDIWQQLGGTVGVAFALVGLGEVAAQLGRPRRAGQLLSAGRALLPAAHPLRRVIVPYDLPARLAAARGAGDPAAFDRGLAEGEDWTIEQAVAAGEADPDADPR
Ga0318571_100374022	3300031549	Soil	MAFALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPDPGTDLE
Ga0318573_100931523	3300031564	Soil	LLIEALQAWQQLGSTAGVAFALFGLGEVAAASGTPHRAGQLLGASQALLPATDPLLHIVVPCDLSTRLTAARERGDATAFDRGLAEGQTWTADEAIAAGLAG
Ga0318515_100919321	3300031572	Soil	AGALLTEALRAWQQLRGRAGMVLALAGLGEAAAGSGQPHRAGQLLGAAQALLPATYPLLHVIVPYDLPGRLAAARTAGDPAAFDRGMADGQGWTIDRAVAAGLTSTADPGISLD
Ga0310915_110252651	3300031573	Soil	QQLRGRAGMVLALAGLGEAAAGSGQPHRAGQLLGAAQALLPATYPLLHVIVPYDLPGRLAAARTAGDPAAFDRGMADGQGWTIDRAVAAGLTSTADPGISLD
Ga0318574_104141121	3300031680	Soil	MDDHPEPGQAFMSAPVTEHFWHELGSTAGAQFALFGLGEVAAGRGAPHRAGQLLGAGQALLPATDPLLHMVVPYDLSARMAAARARGDATAFDGGLAEGQHWTVDEAMAAGLASYQE
Ga0318574_109271491	3300031680	Soil	GRPGMALAIAGLGEIAAGSGQPHRAGQLLGAAQALLPAADPLLRVIVPYDLPGRLAFARTGGDTAAFDRGLAEGQSWTIDRAVAAGLTSAADPDASPG
Ga0318572_102655942	3300031681	Soil	MDDHPEPGQAFMSAPVTEHFWHELGSTAGAVFAFFGLGEVAAGRGAPHRAGQLLGAGQALLPATDPLLHMVVPYDLSARLAAARARGDTTAFDGGLAEGQHWTVDEAMAAGLASYQE
Ga0318496_101572542	3300031713	Soil	ALAGLGEVAAASGAPRRAGQLLGASQVLLPATDPMLRLVVPYDLPATVTAARAGGDPVAFDRGLAEGQAWTIDEAVAAGLASPADPDTGPE
Ga0307476_101636701	3300031715	Hardwood Forest Soil	LRTWQQLRSGPGMALALAGLGEVAADGGQPQRAGQLLGAAQALLPATQNPLLRVTVPYDLPDRIAAARTRGDPASFDRGLTEGKGWTIDRAVDAGLASAPRPPKTPAGSSETVD
Ga0318501_103562291	3300031736	Soil	IEALRAWQQLGSTAGMAFALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPDPGTDLE
Ga0318492_100633821	3300031748	Soil	VALSLAGLGDVAASRGASDRAGQLFGAGRALLPASDPLLAVVVPYDLPARLATARMDGDSVAFDRGLQDRQDWTVDQAVAAGDAIDQAVAAGGGDATLK
Ga0318535_104071532	3300031764	Soil	AFALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPNPGTDLE
Ga0318554_102829571	3300031765	Soil	GSLLIEALRAWQELGSTAGAAFALFGLGEVAASSGAPQRAGQLLGAGQALLPATDPLRHMVVPCDLSTRLSAARARGDTAAFDRGLAEGQNWTVDEAIAAGLAGK
Ga0318509_100522931	3300031768	Soil	AGMAFALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPDPGTDLE
Ga0318509_102914381	3300031768	Soil	WQQLGSTAGVAFALFGLGEVAAASGTPHRAGQLLGASQALLPATDPLLHIVVPCDLSTRLAAARERGDWTAFDRGLAEGQTWTADEAIAAGLAG
Ga0318509_103812461	3300031768	Soil	GVAFAVFGLGEVAAAGGAPRRAGQLLGAGQALLPASDPLLHIVVPCDQSTRLVAARERGDPTAFDRGLAEGQTWTIDQAIAAGLASQQGDDLRSRNDKRR
Ga0318521_107995821	3300031770	Soil	FGLGEVAAGRGAPHRAGQLLGAGQALLPATDPLLHMVVPYDLSARMAAARARGDATAFDGGLAEGQHWTVDEAMAAGLASYQE
Ga0318543_101839731	3300031777	Soil	TAGVAFGLFGLGEVAAASGAPLRAGQLLGAGRALLPVTDPLLHIVVPCDLSARVVAARARGDATAFDRGLAEGQHWTIDEAMAAGLASPASPGTDLE
Ga0318543_101885171	3300031777	Soil	EALRAWQQLGSTAGMAFALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPNPGTDLE
Ga0318566_100517513	3300031779	Soil	LFGLGEVAAASGTPHRAGQLLGASQALLPATDPLLHIVVPCDLSTRLAAARERGDWTAFDRGLAEGQTWTADEAIAAGLAG
Ga0318547_105126301	3300031781	Soil	TDALRAWQQLRGRPGMALAIAGLGEIAAGSGQPHRAGQLLGAAQALLPAADPLLRVIVPYDLPGRLAFARTGGDTAAFDRGLAEGQSWTIDRAVAAGLTSAADPDASPG
Ga0318552_102383112	3300031782	Soil	APHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPDPGTDLE
Ga0318552_107463502	3300031782	Soil	WQQLGSTAGVAFAVFGLGEVAAASGAAHRAGQLIGAGRALLPATDPLLHIVVPCDLSTRLVAARERGDPTGFDRGLTEGQAWTIDEAIAAGLASQQDDELSRNDKRR
Ga0318523_102121931	3300031798	Soil	PHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPDPGTDLE
Ga0318564_101929182	3300031831	Soil	RAWQQLGSTAGMAFALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPDPGTDLE
Ga0318495_100534413	3300031860	Soil	ALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPNPGTDLE
Ga0318551_103459291	3300031896	Soil	LRTWQQLRGRAGMVLALAGLGEVAAASEQPHRAGQLLGAAQALLPATYPLLHVIVPYDLDGRLAGARTRGDPAAFDQGLAEGRDWTMDEAVDAGLASAPRPPKTPA
Ga0306926_119014212	3300031954	Soil	LRAWQQLRGRPGMALAIAGLGEIAAGSGQPHRAGQLLGAAQALLPAADPLLRVIVPYDLPGRLAFARTGGDTAAFDRGLAEGQSWTIDRAVAAGLTSAADPDASPG
Ga0306922_105202142	3300032001	Soil	TSPTAGPLLIEALRAWQQLGSTAGMAFALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPDPGTDLE
Ga0306922_116337251	3300032001	Soil	STAGAAFALFGLGEVAAASGAPHRAGQLLGASQALLPATDPLLHIVVPCDLSTRLAAARERGDWTAFDRGLAEGQTWTADEAIAAGLAG
Ga0318562_102927022	3300032008	Soil	PGMAFALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPDPGTDLE
Ga0318569_103328472	3300032010	Soil	WQQLGSTAGVAFALFGLGEVAAASGTPHRAGQLLGASQALLPATDPLLHIVVPCDLSTRLTAARERGDATAFDRGLAEGQTWTADEAIAAGLAG
Ga0318556_102319071	3300032043	Soil	GMVLALAGLGEVAAASEQPHRAGQLLGAAQALLPATYPLLHVIVPYDLDGRLAGARTRGDPAAFDQGLAEGRDWTMDEAVDAGLASAPRPPKTPA
Ga0318506_104621351	3300032052	Soil	AGSLLIEALHAWQQLGSTAGVAFGLFGLGEVAAASGAPLRAGQLLGAGRALLPVTDPLLHIVVPCDLSARVAAARAHGDATAFDRGLAEGQHWTIDEAMAAGLAGPASPGTDLE
Ga0318510_102916271	3300032064	Soil	GSTAGMAFALAGLGEVAAASGAPHRAGQLLGASRALLSGTDPLHHLIVPYDLPARVIAARAGGDPVAFDRGLAEGQDWPIDKAAAAGLASPPNPGTDLE
Ga0318525_100209465	3300032089	Soil	ALQAWQQLGSTAGVAFALFGLGEVAAAGGTPHRAGQLLGASLALLPATDPLLHIVVPCDLSTRLTAARERGDATAFDRGLAEGQTWTADEAIAAGLAG
Ga0307471_1007536343	3300032180	Hardwood Forest Soil	LLTEALQAWQRLGGNAGMALALAGLGEVAASHGAPRRAGQLLGAGRALLPASDPLLHVIVPYNLSTQLAAARAHGDPGAFDRGLSEGQAWDIDRAVAAGLANPADPETDLE
Ga0307471_1009422332	3300032180	Hardwood Forest Soil	GGNAGMALALAGLGKLAASHGAPRRAGQLLGAGRALLPASDPLLHVIVPYDLPAQLAAARAHGDPAVFDRGLSEGQAWDIDRAVAAGLANPADPDADPLGAADEQQPVQLGRE
Ga0306920_1033670942	3300032261	Soil	LRAWQQLGSTAGVAFAVFGLGEVAAASGAADRAGQLIGAGRALLPATDPLLHIVVPCDLSTRLVAARERGDPTGFDRGLTEGQAWTIDEAIAAGLASQQDDELSRNDKRR
Ga0310914_109891332	3300033289	Soil	GALLTEALRAWQQLRGRAGMVLALAGLGEAAAGSGQPHRAGQLLGAAQALLPATYPLLHVIVPYDLPGRLAAARTAGDPAAFDRGMADGQGWTIDRAVAAGLTSTADPGISLD
Ga0373959_0082325_465_743	3300034820	Rhizosphere Soil	LGSTAGLAFALAGLGEVAAGRGAPRRAGQLLGAGRALLPATDRLVRVIVPYDLSARLTAARAGGDPADFDRGLADGQSWDIDSAVTAGLADP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087551

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences