Metagenome Family F087540

Basic Information
Family ID	F087540
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	38 residues
Representative Sequence	MEAYRIDRFGSVDGIVLRSSEDPRPGPKEVLMRVRAS
Number of Associated Samples	89
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.29 %
% of genes near scaffold ends (potentially truncated)	74.55 %
% of genes from short scaffolds (< 2000 bps)	91.82 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Most Common Taxonomy
Group	Bacteria (60.909 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.636 % of family members)
Environment Ontology (ENVO)	Unclassified (40.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.273 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF08240	ADH_N	12.73
PF13561	adh_short_C2	10.91
PF00596	Aldolase_II	9.09
PF00106	adh_short	4.55
PF00107	ADH_zinc_N	1.82
PF10861	DUF2784	0.91
PF00496	SBP_bac_5	0.91
PF00034	Cytochrom_C	0.91
PF13610	DDE_Tnp_IS240	0.91
PF05019	Coq4	0.91
PF07386	DUF1499	0.91
PF00043	GST_C	0.91
PF03237	Terminase_6N	0.91
PF02586	SRAP	0.91
PF12706	Lactamase_B_2	0.91
PF07969	Amidohydro_3	0.91
PF00313	CSD	0.91
PF14534	DUF4440	0.91
PF07690	MFS_1	0.91
PF03928	HbpS-like	0.91
PF12833	HTH_18	0.91
PF15902	Sortilin-Vps10	0.91
PF00561	Abhydrolase_1	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.91
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.91
COG4446	Uncharacterized conserved protein, DUF1499 family	Function unknown [S]	0.91
COG5031	Ubiquinone biosynthesis protein Coq4	Coenzyme transport and metabolism [H]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.91 %
Unclassified	root	N/A	39.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.91 %
Unclassified	root	N/A	39.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.91 %
Unclassified	root	N/A	39.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.73 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.09 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.82 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.91 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.91 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.91 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	2.73 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.73 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.91 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	2.73 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.82 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.91 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.91 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	0.91 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.91 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.73 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.82 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.91 %
unclassified Candidatus Accumulibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter	0.91 %
Janthinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium	0.91 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.91 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.73 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.82 %
Candidatus Accumulibacter sp. SK-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	0.91 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	0.91 %
Janthinobacterium agaricidamnosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium agaricidamnosum	0.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	10.91 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.73 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	1.82 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.82 %
Agrobacterium larrymoorei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium larrymoorei	0.91 %
Candidatus Accumulibacter sp. SK-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	0.91 %
Janthinobacterium agaricidamnosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium agaricidamnosum	0.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005176\|Ga0066679_10372984	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300005332\|Ga0066388_105024958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Janthinobacterium → Janthinobacterium agaricidamnosum	672	Open in IMG/M
3300005332\|Ga0066388_108151346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300005437\|Ga0070710_11436164	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300005610\|Ga0070763_10925284	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300005713\|Ga0066905_101438841	Not Available	625	Open in IMG/M
3300005764\|Ga0066903_103417752	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300005764\|Ga0066903_104192039	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300006050\|Ga0075028_100808765	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300006175\|Ga0070712_101294808	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300006954\|Ga0079219_10101098	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300007255\|Ga0099791_10541612	Not Available	567	Open in IMG/M
3300007788\|Ga0099795_10531453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp. SK-11	552	Open in IMG/M
3300009089\|Ga0099828_11525231	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300009792\|Ga0126374_10694190	Not Available	764	Open in IMG/M
3300010046\|Ga0126384_11179092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	706	Open in IMG/M
3300010048\|Ga0126373_10033500	Not Available	4462	Open in IMG/M
3300010326\|Ga0134065_10310465	Not Available	607	Open in IMG/M
3300010341\|Ga0074045_10105821	All Organisms → cellular organisms → Bacteria	1943	Open in IMG/M
3300010358\|Ga0126370_11220629	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300010361\|Ga0126378_10161222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2293	Open in IMG/M
3300010366\|Ga0126379_12094325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	668	Open in IMG/M
3300010376\|Ga0126381_102797948	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300011269\|Ga0137392_11622580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300011271\|Ga0137393_10749100	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300011410\|Ga0137440_1097144	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012096\|Ga0137389_11225661	Not Available	643	Open in IMG/M
3300012203\|Ga0137399_11089390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300012203\|Ga0137399_11101666	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	669	Open in IMG/M
3300012205\|Ga0137362_10377490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1228	Open in IMG/M
3300012208\|Ga0137376_10746583	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300012361\|Ga0137360_11605869	Not Available	555	Open in IMG/M
3300012923\|Ga0137359_11171817	Not Available	656	Open in IMG/M
3300012927\|Ga0137416_11574830	Not Available	598	Open in IMG/M
3300012929\|Ga0137404_11565142	Not Available	611	Open in IMG/M
3300012971\|Ga0126369_11776339	Not Available	705	Open in IMG/M
3300016270\|Ga0182036_10290342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1240	Open in IMG/M
3300016270\|Ga0182036_10341494	Not Available	1151	Open in IMG/M
3300016270\|Ga0182036_10452335	Not Available	1010	Open in IMG/M
3300016270\|Ga0182036_11064265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	669	Open in IMG/M
3300016294\|Ga0182041_11423119	Not Available	637	Open in IMG/M
3300016357\|Ga0182032_10583077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	929	Open in IMG/M
3300016357\|Ga0182032_10916621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	745	Open in IMG/M
3300016387\|Ga0182040_11964823	Not Available	502	Open in IMG/M
3300016404\|Ga0182037_10107833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2019	Open in IMG/M
3300016404\|Ga0182037_10134019	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300018468\|Ga0066662_12803719	Not Available	517	Open in IMG/M
3300021168\|Ga0210406_10854181	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300021168\|Ga0210406_11271202	Not Available	532	Open in IMG/M
3300021362\|Ga0213882_10258924	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300021401\|Ga0210393_10613806	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300021432\|Ga0210384_11614366	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300021474\|Ga0210390_11309298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300021479\|Ga0210410_11553014	Not Available	555	Open in IMG/M
3300021560\|Ga0126371_10355510	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300021560\|Ga0126371_11033817	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300021560\|Ga0126371_13020508	Not Available	570	Open in IMG/M
3300025898\|Ga0207692_10461313	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300026330\|Ga0209473_1325638	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300027049\|Ga0207806_1042842	Not Available	516	Open in IMG/M
3300027603\|Ga0209331_1043831	Not Available	1137	Open in IMG/M
3300027812\|Ga0209656_10156542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1137	Open in IMG/M
3300027855\|Ga0209693_10392221	Not Available	671	Open in IMG/M
3300031231\|Ga0170824_124974020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1801	Open in IMG/M
3300031469\|Ga0170819_11579150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium larrymoorei	714	Open in IMG/M
3300031564\|Ga0318573_10408523	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031572\|Ga0318515_10174786	All Organisms → cellular organisms → Bacteria → Proteobacteria	1148	Open in IMG/M
3300031679\|Ga0318561_10091004	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300031682\|Ga0318560_10562335	Not Available	618	Open in IMG/M
3300031708\|Ga0310686_107095990	Not Available	951	Open in IMG/M
3300031719\|Ga0306917_10449596	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300031719\|Ga0306917_11464053	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300031724\|Ga0318500_10160601	Not Available	1061	Open in IMG/M
3300031744\|Ga0306918_10329912	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300031744\|Ga0306918_10545519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	908	Open in IMG/M
3300031744\|Ga0306918_10550381	Not Available	904	Open in IMG/M
3300031754\|Ga0307475_11135461	Not Available	610	Open in IMG/M
3300031763\|Ga0318537_10079356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1208	Open in IMG/M
3300031795\|Ga0318557_10424791	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300031823\|Ga0307478_10405269	Not Available	1130	Open in IMG/M
3300031823\|Ga0307478_11594938	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300031835\|Ga0318517_10562891	Not Available	512	Open in IMG/M
3300031846\|Ga0318512_10435835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300031860\|Ga0318495_10438030	Not Available	574	Open in IMG/M
3300031879\|Ga0306919_10601251	Not Available	848	Open in IMG/M
3300031890\|Ga0306925_10456897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1364	Open in IMG/M
3300031890\|Ga0306925_10602071	All Organisms → cellular organisms → Bacteria → Proteobacteria	1160	Open in IMG/M
3300031910\|Ga0306923_10585929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1253	Open in IMG/M
3300031910\|Ga0306923_10702076	Not Available	1126	Open in IMG/M
3300031910\|Ga0306923_11897073	Not Available	608	Open in IMG/M
3300031912\|Ga0306921_10475021	All Organisms → cellular organisms → Bacteria → Proteobacteria	1455	Open in IMG/M
3300031941\|Ga0310912_11188009	Not Available	581	Open in IMG/M
3300031942\|Ga0310916_10427626	Not Available	1127	Open in IMG/M
3300031947\|Ga0310909_10099772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2332	Open in IMG/M
3300031947\|Ga0310909_10213514	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300031962\|Ga0307479_11309133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	685	Open in IMG/M
3300031965\|Ga0326597_11547783	Not Available	634	Open in IMG/M
3300031981\|Ga0318531_10272746	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300032001\|Ga0306922_11757418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300032001\|Ga0306922_11837112	Not Available	595	Open in IMG/M
3300032039\|Ga0318559_10340496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	698	Open in IMG/M
3300032055\|Ga0318575_10329335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	773	Open in IMG/M
3300032160\|Ga0311301_12346755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300032180\|Ga0307471_101892187	Not Available	746	Open in IMG/M
3300033289\|Ga0310914_10271970	All Organisms → cellular organisms → Bacteria → Acidobacteria	1525	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.27%
Aquatic	Environmental → Aquatic	2.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.36%
Sediment	Environmental → Aquatic → Sediment	1.82%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.64%
Loam	Environmental → Terrestrial → Soil → Loam	11.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.82%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.91%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.91%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011410	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT222_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087540

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066679_103729842	3300005176	Soil	MKAYHIDRFGSVGGIARRSSQDPRPGLKEVLMRVRASSLNY
Ga0066388_1050249581	3300005332	Tropical Forest Soil	MKAYRIDRFGGVDGIVLQSSDDPRPGLGEVLIRVRTSTAPELL*
Ga0066388_1081513462	3300005332	Tropical Forest Soil	MEEEEMEAYRIKRFGGVDGISPEVSGDPHPGPREVLMRVRAS
Ga0070710_114361642	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MEAYHIDRFGMVRRSSEDPRPGLKEVVMRVRASSLNYRDLMVL
Ga0070763_109252842	3300005610	Soil	MEAYRIDRFGSVDGIVSRSSVDPRPGLKEVLMRVRASSLN
Ga0066905_1014388411	3300005713	Tropical Forest Soil	MKAYRIDRFGGVDGIVLQSIDDPRPGLEEVLIRVRTSTAPELL*
Ga0066903_1034177521	3300005764	Tropical Forest Soil	MKAYRIDRFGGVDGIVLQSIDDPRPGLGEVLIRVRTSTAPELL*
Ga0066903_1041920393	3300005764	Tropical Forest Soil	MKAYHIDRFGGVGGIALRASEDPRPGLREILMRVRASSL
Ga0075028_1008087652	3300006050	Watersheds	MKAYHIDRFGSVGGIVRRSSEDPRPGPKEILMRVCAS
Ga0070712_1012948081	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MEAYRIDRFGSVDGIVLRSSEDPRPGPKEILMRVRASS
Ga0079219_101010982	3300006954	Agricultural Soil	MKAYHIDRFGGVGGIVRRSSEDPRPGPKEVLMRVRASSL
Ga0099791_105416122	3300007255	Vadose Zone Soil	MEAYRVDRFGSVDGIVLRSSEDPRLGPQEILMRVRASSL
Ga0099795_105314532	3300007788	Vadose Zone Soil	MEAYRIDRFGSVDGIVLRSSEDPRPGPKEILMRVR
Ga0099828_115252312	3300009089	Vadose Zone Soil	MEAYRIDRFGSVDGIVLRSSEDPRPGPKEILMRVRELA*
Ga0126374_106941902	3300009792	Tropical Forest Soil	MKAYRIDRFVGVDGIVLQSSDDPRPGLGEVLIRMRASTAPELL*
Ga0126384_111790923	3300010046	Tropical Forest Soil	MKAHRIDRFGGVDGIVLQSIDDPRPGLGEVLIPVRTSTAPELL*
Ga0126373_100335001	3300010048	Tropical Forest Soil	MEAYRIDRFGSVDGIVLRSSEDPQPGPKEVLMRVR
Ga0134065_103104652	3300010326	Grasslands Soil	MKAYHIDRFGSVGGIVRRSSEDPPPGRKEVLMRVRA
Ga0074045_101058212	3300010341	Bog Forest Soil	MKAYRIGRFGGVDGIVLRSSEDPRPRPKEILMRVR*
Ga0126370_112206291	3300010358	Tropical Forest Soil	MKAYHIDRFGGVGGIALRASEDPRPGLREILMRVRASSLN
Ga0126378_101612224	3300010361	Tropical Forest Soil	VEAYRIDRFGSVDGIVLRSSEDPRPGLRQILMRVRELA*
Ga0126379_120943251	3300010366	Tropical Forest Soil	MEAYRIDRFGSVDGLVLRSSADPRPGRKEVLMRVCASFAELT
Ga0126381_1027979482	3300010376	Tropical Forest Soil	MEAYHIDHFGSVDGIVLRSSDNPRPERKEILMRVR*
Ga0150983_103647281	3300011120	Forest Soil	EMEAYRIDRFGSVDGIVLRSSEDPRPGSKEILMRVPTRSTTAI*
Ga0137392_116225802	3300011269	Vadose Zone Soil	MMEAYRIDRFGSVDGIALRSSEDPRPGPKEILMRVRA
Ga0137393_107491001	3300011271	Vadose Zone Soil	VDNREEEEMESYRIDRFRSVDGIVLRSSDDPRPAPKEILM
Ga0137440_10971441	3300011410	Soil	MRAYRIESFGSVDGVVLGAGDDPQPGTREILVRMRATS
Ga0137389_112256611	3300012096	Vadose Zone Soil	MKAYRIDRFGSVEGIVLRSSEDPRPGPKEILMRVRA
Ga0137399_110893901	3300012203	Vadose Zone Soil	MEAYRIDRFGSVDGIVLQSSEDPRPGPKEILMRVRA
Ga0137399_111016662	3300012203	Vadose Zone Soil	MEAYRIDRFGSVDGIVLRSSEDPRLGPQEILMRVRASSL
Ga0137362_103774901	3300012205	Vadose Zone Soil	MEAYRIDRFGSVDGIVFRSSEDPGPGPKEVLMRVCAS
Ga0137376_107465832	3300012208	Vadose Zone Soil	MEAYRIDRFGSVDGIVLRSSEDPRPGPKEILTRVRA
Ga0137360_116058691	3300012361	Vadose Zone Soil	MEAYRIDSVDGVVLRSSEDPGPGPKEILMRVRASS
Ga0137359_111718172	3300012923	Vadose Zone Soil	VDNREEEEMEAYRIDRFGSVDGIVLRSSEDPRPGPKEILMRV
Ga0137416_115748301	3300012927	Vadose Zone Soil	MEAYRIDRFGSVDGIVLRSSDDPRSGPKEALMRVRASSL
Ga0137404_115651421	3300012929	Vadose Zone Soil	MEAYRIDRFGSVDGIVLRSSGDPRPGPKEILMRVRASS
Ga0126369_117763391	3300012971	Tropical Forest Soil	MEAYHIARFGSVDGIVLRSSEDPPPGRKEVLMQVRAGR*
Ga0182036_102903422	3300016270	Soil	MEAYRIDRFGSVDGIVLRSSEDPRPGLREILMRVRASSL
Ga0182036_103414942	3300016270	Soil	MKSYRIERFGSVDGVVLRSCDDPRPGPREILMRVRARLTTAI
Ga0182036_104523351	3300016270	Soil	MKAHHIDRIGSIGGIVRRSAEDPRPGPKEVLMRVRASSLN
Ga0182036_110642652	3300016270	Soil	VEAYRIDSFGSVDGIVLRSSEDPRPGLREILMRVRA
Ga0182041_114231192	3300016294	Soil	MKACHIDRFGSVGGIALRSSEDPQPGLREVLMRVRASSLN
Ga0182032_105830771	3300016357	Soil	MEAYRIEHFGSVDGIMLRSSEDPRPGPKEILMRVRAS
Ga0182032_109166212	3300016357	Soil	MEAYHIERFGSVDGIVLRSSEDPRLGLKEILMRVLAS
Ga0182040_119648231	3300016387	Soil	VEAYRIDRFGSVDGILLRSSEDPRPGLREVLMRVRA
Ga0182037_101078332	3300016404	Soil	MQAYRIERFGSVDGIELRSNGDLRPGLREVLMRVR
Ga0182037_101340192	3300016404	Soil	MKAYRIDRFGGVDGIVLQSVDDPRPGLGEVLIRVRTSTAPELL
Ga0182038_116782612	3300016445	Soil	RIERFGSVDGVVLRSCDDPRPGPKEILMRVARARLTTAI
Ga0066662_128037191	3300018468	Grasslands Soil	MQAYRIARFGSVDGIVLRSSEDPRTEPKEILMQVRASSLN
Ga0210406_108541811	3300021168	Soil	MKAYHIDRFGSVGGIVRRSSQDPRPGPKEVLMRVLAS
Ga0210406_112712021	3300021168	Soil	MKAYHIDRFGSVGGIVRRSSEDPRPGPKEVLMRVRASSL
Ga0210400_115179232	3300021170	Soil	MEADRIDRFGSVDGIVLRVSADPRPGPKEVLMTVPRQLARLSGSDGPEG
Ga0213882_102589242	3300021362	Exposed Rock	MKAYHIDRFGNVDGFVSRSSDNPRPERKEVLMRVR
Ga0210393_106138062	3300021401	Soil	MEAYRIDRFGSVDGIVLRSSEDPRPGPKEVLMRVRELA
Ga0210384_116143661	3300021432	Soil	MSKGDGMKAYCIDHFGSVDGVVLQSRAEPQPGRREILVRVGATSLNY
Ga0210390_113092981	3300021474	Soil	MKAYHIDRFGSVGGIVRRSSEDPRPGPKEVLMRVRASS
Ga0210410_115530141	3300021479	Soil	MKAYHIDRFGSVGGIVRRSSEDPRPGPKEVLMRVRAS
Ga0126371_103555103	3300021560	Tropical Forest Soil	MKAYRIDRFGGVDGIVLQSSDDPRPGLGEVLIRMRASTAPELL
Ga0126371_110338171	3300021560	Tropical Forest Soil	MEAYHIARFGSVDGIVLRSSEDPPPGRKEVLMQVRADR
Ga0126371_130205083	3300021560	Tropical Forest Soil	MKAYHIDRFGGVGGIALRASEDPRPGLREILMRVRAS
Ga0207692_104613132	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKAYHIDRFGSVGGIVRRSSEDPQPGLKEVLMRVR
Ga0209473_13256381	3300026330	Soil	LKAYHIDRFGSIGGIVRRSSEDPRPGLKEVLMRVCASSLN
Ga0207806_10428421	3300027049	Tropical Forest Soil	LPRQWWRVMEAYCIDRFGSVDGIVLRSSEDPRPGLKEILMR
Ga0209331_10438312	3300027603	Forest Soil	MEAYRIDRFGSVDGIVLRSSEDPRPEPKEILMRVRA
Ga0209656_101565421	3300027812	Bog Forest Soil	MKAYRIGRFGGVDGIVLRSSEDPRPRPKEILMRVR
Ga0209693_103922211	3300027855	Soil	MEAYHIERFGSVDGIVLRSSKDPRPGPKEVLMRVRAS
Ga0170824_1249740203	3300031231	Forest Soil	MDAYRIDRFGSVDRIVLRSSDDPRPRLREVLMRVRVSLLDYR
Ga0170819_115791501	3300031469	Forest Soil	MEAYRIDRFGSVDGIVLRSSEDPRPGPKEILMRVRASALAT
Ga0318541_101267202	3300031545	Soil	MKSYRIERFGSVDGVVLRSCDDPRPGPKEILMRVARARLTTAI
Ga0318573_104085232	3300031564	Soil	MKAYRIDRFGGVDGIVLQSIDDPRPGLGEVLIRVRTSTAPELL
Ga0318515_101747862	3300031572	Soil	MKAYRIDRFGGVDGIVLQSVDDPRPGLEEVLIRVRTSTAPELL
Ga0318561_100910043	3300031679	Soil	MKAYRIDRFGGVDGIVLQSIDDPRPGLEEVLIRVRTSTAPELL
Ga0318560_105623351	3300031682	Soil	MEAYRIDRFGSVDGIVLRSSPDPRPGPKEVLMRVRSS
Ga0310686_1070959902	3300031708	Soil	MEGYHIDRFGSVDGIVLRSSEDPRPGLREVLTQVRASLLNDRDLRTGL
Ga0306917_104495961	3300031719	Soil	RIERFGSVDGIELRSSDDPRPGLREVLMRVRASSLN
Ga0306917_114640531	3300031719	Soil	MEAYHIDRFGSVDGIVLRSTEDPRPGLREVLMRVRASSL
Ga0318500_101606011	3300031724	Soil	VEAYRIDSFGSVDGILLRSSEDPRPGLREVLIRVRATPL
Ga0306918_103299121	3300031744	Soil	MKAYHVDRFGSIGGIVRRSAEDPRPGPKEVLMRVRASSL
Ga0306918_105455191	3300031744	Soil	MKAHHIDRIGSIGGIVRRSAEDPRPGPKEVLMRVRA
Ga0306918_105503811	3300031744	Soil	MKAYHIDRFGSIGGIVRRSAEDPRPGPKEVLMRVRASSL
Ga0307475_111354612	3300031754	Hardwood Forest Soil	VEAYRIDSFGSVDGILLRSSEDPRPGLREVLMRVR
Ga0318537_100793561	3300031763	Soil	MEAYRIDHFAGVDGIVLRSSPDPRPGPKEVLMRVRA
Ga0318557_104247912	3300031795	Soil	MQAYRIERFGSVDGIELRSSDDPRPGLREVLMRVRASTLNYRD
Ga0307478_104052692	3300031823	Hardwood Forest Soil	MEAYHIERFGSVGGIVRRSSEDPRPGLKEVLMRVHA
Ga0307478_115949382	3300031823	Hardwood Forest Soil	MKAYHIDRFGSVGGIVRRSSEDPRPGLKEVLTRVHAS
Ga0318517_105628911	3300031835	Soil	MKAYHIDRFGSIGGIVRRSAEDPRPGPKEVLMRVRAS
Ga0318512_104358351	3300031846	Soil	MKAYRVERFGSVNGIVLRSCDDPRPGPREILMRVRARLT
Ga0318495_104380301	3300031860	Soil	MKAYRIDRFGSIGGIVRRSAEDPRPGPKEALMRVR
Ga0306919_106012512	3300031879	Soil	MKAYHIDRFGSIGGIVRRSAEDPRPGPKEVLMRVRASSLN
Ga0306925_104568973	3300031890	Soil	MKSYRIERFGSVDGVVLRSCDDPRPGPKEILMRVARARLT
Ga0306925_106020713	3300031890	Soil	MKAYHIDRFGSIGGIARRSVEDPRPGPKEVLMRVRA
Ga0306923_105859291	3300031910	Soil	MKAYHIDRFGSIGGIVRRSAEDPRPGPKEVLMRVRA
Ga0306923_107020761	3300031910	Soil	MKAYHIDRFGSIGGIARRSVEDPRPGPKEVLMRVRAS
Ga0306923_111705823	3300031910	Soil	MKAYRIERFGSVDGVVLRSCDDPRPGPKEILMRVARARLTTAI
Ga0306923_118970731	3300031910	Soil	GGRGGEMQAYRIERFGSVDGIELRSNGDLRPGLREVLMRVR
Ga0306921_104750211	3300031912	Soil	MEAYHIERFGSVDGIVLRSSEDPRPGLKEILMRVRASSL
Ga0310912_111880092	3300031941	Soil	MEAYRIDRFGSVDGIVLRSSEDPRPGPKEVLMRVRA
Ga0310916_104276261	3300031942	Soil	LGGASEEGEMKAYHIDRFGSVGGIVRRSAEDPRPGPKEVLMRVRAS
Ga0310909_100997724	3300031947	Soil	MRAFRIERFGSVDGIELRSSDDPRPGLREVLMRVRA
Ga0310909_102135141	3300031947	Soil	MKAYRIDRFGGVDGIVLQSVDDPRPGLEEVLIRVRTS
Ga0307479_113091331	3300031962	Hardwood Forest Soil	VEAYRIDRFGSVDGVVLRSSEDPRPGLREVLMRVRATSLN
Ga0326597_115477832	3300031965	Soil	MKSYRIESFGSVDGVVLGSRDDPRPGAREILVRVR
Ga0318531_102727461	3300031981	Soil	AYRIDRFGGVDGIVLQSIDDPRPGLEEVLIRVRTSTAPELL
Ga0306922_117574182	3300032001	Soil	MKAYRIERFGSVDGVVLRSCDDPRPGPKEILMRVRASS
Ga0306922_118371121	3300032001	Soil	GGEMQAYRIERFGSVDGIELRSNGDLRPGLREVLMRVR
Ga0318559_103404961	3300032039	Soil	MKAHHIDRIGSIGGIVRRSAEDPRPGPKEVLMRVRASS
Ga0318575_103293351	3300032055	Soil	MKAYHIDRFGSIGGIVRRSAEDPRPGPKEVLMRVR
Ga0311301_123467551	3300032160	Peatlands Soil	MGAYRIDRSGSVDGIVLRSSEDPRPRSKKILMRAGA
Ga0307471_1018921872	3300032180	Hardwood Forest Soil	MEAYRIDRFGSVDGIVLRSSEDPRPGPKEVLMRVRAS
Ga0310914_102719701	3300033289	Soil	MKAYHIDRFGSIGGIVRRSAEDPRPGPKEVLMRVRASS

Hidden Markov Model


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