Metagenome / Metatranscriptome Family F087430

Basic Information
Family ID	F087430
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	74 residues
Representative Sequence	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLS
Number of Associated Samples	38
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	36
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (64.546 % of family members)
Environment Ontology (ENVO)	Unclassified (96.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (64.545 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 5.33% Coil/Unstructured: 54.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01641	SelR	20.91
PF02826	2-Hacid_dh_C	9.09
PF11924	IAT_beta	2.73
PF00132	Hexapep	2.73
PF00462	Glutaredoxin	1.82
PF05050	Methyltransf_21	0.91
PF04908	SH3BGR	0.91
PF00892	EamA	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	20.91

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.18%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	88.18%
Oceanic	Environmental → Aquatic → Marine → Oceanic	9.09%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.82%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	88.18%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	64.55%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	20.00%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	9.09%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	3.64%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.91%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.91%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002913	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300012413	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012415	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA15.ICE_1m.20151115 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012418	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012782	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA30.ICE_1m.20151125 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020358	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)	Environmental	Open in IMG/M
3300020372	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)	Environmental	Open in IMG/M
3300020376	Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)	Environmental	Open in IMG/M
3300020382	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)	Environmental	Open in IMG/M
3300020388	Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300022843	Saline water microbial communities from Ace Lake, Antarctica - #5	Environmental	Open in IMG/M
3300025425	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental	Open in IMG/M
3300031142	Marine microbial communities from water near the shore, Antarctic Ocean - #353	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031629	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031695	Marine microbial communities from water near the shore, Antarctic Ocean - #233	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031702	Marine microbial communities from David Island wharf, Antarctic Ocean - #37	Environmental	Open in IMG/M
3300031705	Marine microbial communities from water near the shore, Antarctic Ocean - #36	Environmental	Open in IMG/M
3300031721	Marine microbial communities from water near the shore, Antarctic Ocean - #181	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26060J43896_101381821	3300002913	Marine	MIKNKPNEVVYHVLSHHIYHYIQAKKIFKTDYDSHMITIAVFAHFLYGTLNPSHEKYRHEDLEWGEM
Ga0075445_101778722	3300006193	Marine	VVKNKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKKKYLDKLSLFSLSHILD
Ga0075448_101452661	3300006352	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPTHEKYQHEDLEWGEMYPLVKGLS
Ga0114995_103673702	3300009172	Marine	MIKKKPNEVVYHVLSNHINHYRQGKKIFKTDYDSHMITITVFTHFLCGTLNPSHEQYQHEDLPQFINFFKENLL*
Ga0114993_112577202	3300009409	Marine	MTKSKPNEVVYHVLSHHIDHYIEAKKIFKTDYDSHMISTTVFAHFLHGTLNSSHEKYQHEDLDWDEMYPLVKGLSKNKKKYL
Ga0114994_100448841	3300009420	Marine	VVKKKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPTHEKYLHKDLEWGEMYPLVKG
Ga0115548_10260324	3300009423	Pelagic Marine	MFKKLPTEVAYHVLSHHMEHYNLVRKIFKTDYDSHIITITAFTHFLYGTLNPSHEKSQHEDLEWGEMYPLVKGFS*
Ga0115002_102010913	3300009706	Marine	MTKFKPNEVVYHVLSHHIDHYIEAKKIFKTDYDSHIITITVFAHFLYGTLNPSHEKYHHEDLDWGKMYPLVKDLSKNKKK
Ga0115001_102015772	3300009785	Marine	MVKKLPTEVAYHVLSHHMEHYNLVRKIFKTDYDSHMITITAFTHFLYGTLNPSHEKSQHEDLEWGEMYPFAKGLSKNKKKYVSKLSFFSISQILDMPRE
Ga0133547_102873551	3300010883	Marine	MTKNKSNEVVYHVLSHHIDHYIKSKKIFKTDYDSHMITITVFTHFLYGTLNPSHEKFQQ*
Ga0133547_116107212	3300010883	Marine	MAKNKLNEVAYHVLLHHIDHYVQSKKIFKTDYDSHIITISVFAHFLYGTLNPSYEKNIYNFNTYFFNF*
Ga0138258_15883662	3300012413	Polar Marine	MVKNKPNEVVYHVLSHHIDHYRKSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVK
Ga0138263_12252632	3300012415	Polar Marine	MVKNKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNP
Ga0138261_10374991	3300012418	Polar Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKSVSKNKKKILR*
Ga0138268_15432332	3300012782	Polar Marine	VVKNKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLN
Ga0211689_12020031	3300020358	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKADYDSHMITIAVFTHFLYGTLNPTH
Ga0211683_100199551	3300020372	Marine	MTKNKPNEVVYHVLSHHIDHYRKSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYLHEDLEWGEMYPLVKGLSKNKKKYLD
Ga0211683_102150481	3300020372	Marine	MVKKKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKKKYLD
Ga0211683_102718752	3300020372	Marine	VVKNKPNEVVYHVLSHHIDHYRQTKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLE
Ga0211683_102828642	3300020372	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWG
Ga0211683_102879491	3300020372	Marine	MVKKKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFAHFLYGTLNPTHKKYLHEDLEWGEMYPLVKGLSKNKKKYSD
Ga0211682_102193742	3300020376	Marine	VVKKKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHKKYQHEDLEWGEMYPLVKGLSKNKKKYL
Ga0211682_103970622	3300020376	Marine	MLKNKPMVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYLHE
Ga0211682_103991972	3300020376	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQH
Ga0211682_103995652	3300020376	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKKKYLDKLSLF
Ga0211686_100437371	3300020382	Marine	MIKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGT
Ga0211686_102705512	3300020382	Marine	MVKNKPNEVVYHVLSHHIDHYRQTKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSK
Ga0211686_103464991	3300020382	Marine	VIKKKPNEVVYHVLAHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGT
Ga0211686_103628942	3300020382	Marine	VVKNKPNEVVYHVLSHHIDHYRQTKKIFKTDYDSHMITITVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKKKYLDKLSL
Ga0211686_103873601	3300020382	Marine	MLKSKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHKKYQHEDLEWGEMYPLVKGLSKNKKKYLDKLSLF
Ga0211686_104031682	3300020382	Marine	VVKKKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGT
Ga0211678_101625412	3300020388	Marine	MHHIDHYIQAKKIFKTDYDSHMITITVFAHFLYGTLNPSHEKYRHEDLEWGDMYPLVKGLSKSKKKYLD
Ga0211687_100607401	3300020396	Marine	MFKNKPNEVVYHVLSHHIDHYIQAKKIFKTDYDSHMITITVFAHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSK
Ga0211687_102252941	3300020396	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHKDLEWGEMYPLVKGLSKNKKKYLDKL
Ga0211687_102627101	3300020396	Marine	MSKNKPNEVVYHVLSHHIDHYIQAKKIFKTDYDSHMITITVFAHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSK
Ga0222631_10065652	3300022843	Saline Water	VVKKKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITVAVFTHFLYGTLNPSHKKYLHEDLEWGEMYPLVKGLSKNKK
Ga0208646_10121583	3300025425	Saline Lake	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSH
Ga0209192_102752572	3300027752	Marine	MIKKKPNEVVYHVLSNHINHYRQGKKIFKTDYDSHMITITVFTHFLCGTLNPSHEQYQHEDLPQFINFFKENLL
Ga0209402_105242022	3300027847	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFQTDYDSHMITIAVFTHFLYGTLNPSHEKYQNEDLEWGEMYP
Ga0308022_12136031	3300031142	Marine	MTKNKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPTHEKYQHEDLEWGEMYPLVKGLSKN
Ga0308025_10241705	3300031143	Marine	MTKKRPNEVVYHVLSHHIDHYIQSKRIFKTDYDSHMITITVFAHFLYGTLNPSHEKFQNEDLDWG
Ga0308025_11120131	3300031143	Marine	MVKNKPNEVVYHVLSHHIDHYKQSKKIFKTDYDSHMITITVFTHFLYGTLNPSHEKYQHEDL
Ga0308025_12575752	3300031143	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMVTIAVFTHFLYGTLNPSHEKYLHEDLEWGEMYP
Ga0308025_12678441	3300031143	Marine	VVKNKPNEVVYHVLSHHIDHYRQTKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYLHEDLEWGEMYPLI
Ga0308010_10387844	3300031510	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKN
Ga0308010_11956222	3300031510	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFQTDYDSHMITIAVFTHFLYGTLNPSHEKYQNEDLEWGEMYPLVKG
Ga0308010_12294152	3300031510	Marine	VVKKKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYHHEDLEWGEMYPLVKGLSKNKKKYSGYAKRNCS
Ga0308019_100514634	3300031598	Marine	MVKKRPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITVAVFTHFLYGTLNPTHKKYLHE
Ga0308019_101842891	3300031598	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITITVFIHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKKKYSDKLSI
Ga0308019_102167393	3300031598	Marine	MPKNKANEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQH
Ga0308019_102669472	3300031598	Marine	VVKKKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYS
Ga0308019_102689341	3300031598	Marine	VVKNKPNEVVYHILSHHIDHYRQSKKIFKNDYDSHMITIAVFTHFLYGTLNPSHEKYLHKDLEWGEMYPLVKGISKNKKRYLDKLSLFSIS
Ga0308019_103329902	3300031598	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLS
Ga0308007_100565403	3300031599	Marine	MPKNKANEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKKKYLD
Ga0308007_100869523	3300031599	Marine	MIKKLSIEVVYHLLSHHMEHYNLVRKIFKTDYDSHMISITAFVHFLYGNLNPSHEQYQHEDLEWGEMYP
Ga0308007_102140442	3300031599	Marine	MVKNKPNEVVYHVLSHHIDHYRQTKKIFKTDYDSHMITIAVFTHFLYGTLNPSHQKYQHEDLEWGEMYPLVKGLSKNK
Ga0308007_102590152	3300031599	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYLHEDLEWGE
Ga0307985_102874951	3300031629	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKKKYLDKLSLFSLSYILDM
Ga0307985_103273442	3300031629	Marine	VVKNKPNEVVYHVLSHHIDHYRKSKKIFKTDYDSHMITITVFTHFLYGTLNSLHEKYRYEDLEWGEMYPLVKGLSKNKKKYLDKLSLFPL
Ga0307985_104226102	3300031629	Marine	MVKKRPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPTHKKYLHEDLEWGEMYPLVKGLSKNKKKYLDKLSLFSISQIL
Ga0308004_100414731	3300031630	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQREDLEWGEMYPLVKGLSKNKKKYLDKLSLFS
Ga0308004_100783821	3300031630	Marine	VVKKKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPTHEKYLHEDLEWGEMYPLVKGLSKNNKKYLDK
Ga0308004_101025831	3300031630	Marine	MIKNKPNEVVYHVLSHHIDHYRQTKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKKKYLDKLSLFSLSHI
Ga0308004_101051941	3300031630	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGFSKNKKKYLDKLSLFSISHIL
Ga0308004_101683733	3300031630	Marine	MSKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHKKYQHEDLEWGEMYPLVKGLSKNKKKYLDKLSLFSLSYI
Ga0308004_102106282	3300031630	Marine	MVKKRPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPTHKKYLHEDLEWGEMYPLVKGLSKNKKKYLDKLSLFSLSHILGMPKETIRRKVDALCKTKQLEYTVSS
Ga0308004_102185171	3300031630	Marine	VVKNKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPTHEKYSHEDLEWGEMYPLVKGLSKNKKKYLD
Ga0308004_102337041	3300031630	Marine	VVKNKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYLHEDLEWGEMYPLVKVISKNKKKYLDKLSLFSL
Ga0308004_102640172	3300031630	Marine	VVKKKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYLHEDLEWGEMYPLVKGISKNKKKYSDKLSLFSISH
Ga0308004_103313252	3300031630	Marine	VVKNKPNEVVYHILSHHIDHYRQSKKIFKNDYDSHMITIAVFTHFLYGTLNPSHEKYLHKDLEWGEMYPLVKGISKNKKRYLDKLSLF
Ga0308004_103419021	3300031630	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKKKYLDKLSLFSLS
Ga0308001_101296491	3300031644	Marine	MSKRDEVVYHVISHHIDHYRQTKKIFKTDYDSHMITLTVFAHFLYGTLNPSHEKYQHEDLEWGEMFPLVQGVSKNKGKYLDRLSLF
Ga0308001_101301381	3300031644	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPTHE
Ga0308001_101493571	3300031644	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKSDYDSHMITITVFTHFLYGTLNPSHEKYQHKDLEWGEMYPLVKGLSKNKKKYLDKLSLFSISQILDIPKET
Ga0308001_101558521	3300031644	Marine	MLKNKPMVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQH
Ga0308001_103760291	3300031644	Marine	MSKRDEVVYHMLSHHIDHYIQSKKIFKTDYDSHMITIAVFKHFLYGVLNPSHEKYQHEDLEWGEMFPLVKNVSKNREKYLDKLSLFSIAHMLDMPK
Ga0308001_103787831	3300031644	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQREDLEWGEMYPLVKGLSKNKKKYSDKLSLFSLSYILDM
Ga0307986_100634991	3300031659	Marine	MPKNKPNEVVYHVLSHHIDHYRQTKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKY
Ga0307986_101188281	3300031659	Marine	VLSHHIDHYRQTKKIFKTDYDSHMITITVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKKKYLDKLSLFSISQILEMPKETV
Ga0307986_102229571	3300031659	Marine	MSKSKPNEVVYHVLSHHIDHYRQSKKIFKSDYDSHMITITVFTHFLYGTLNPTHEKYLHEDLEWGEMYPLVKGLSKNNKKYLD
Ga0307986_102759851	3300031659	Marine	VKKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITITVFTHFLYGTLNPTHEKYQHEDLEWGEMY
Ga0307986_103404311	3300031659	Marine	MSKRDEVVYHVISHHIDHYRQTKKIFKTDYDSHMITLTVFAHFLYGTLNPSHEKYQHEDLEWGEMFPLVQGVSK
Ga0308016_100202201	3300031695	Marine	MIKNKPNEVVYHVLSHHIDHYRQTKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDL
Ga0308016_100718841	3300031695	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITITVFTHFLYGTLNPSHEKYQHEDLEWG
Ga0308016_101127691	3300031695	Marine	VVKKKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPTHEKYQHEDLEWGEMYPLVKGLSKN
Ga0308016_101783352	3300031695	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITITVFTHFLYGTLNPSHEKYQHEDLEWGEMYP
Ga0308016_101873031	3300031695	Marine	MVKKRPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPTHEKYQHEDLEWGEMYPLVKGLSKNKKKYLD
Ga0308016_101940302	3300031695	Marine	MVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHIITIAVFTHFLYGTLNPSHEKYQR
Ga0308016_102459722	3300031695	Marine	MIKKKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKNKEQYL
Ga0308016_102625303	3300031695	Marine	MPKNKANEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKY
Ga0308016_103193322	3300031695	Marine	VVKNKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYLNEDLEWGEMYPLVKGISKNKKKYLDKL
Ga0308016_103467922	3300031695	Marine	MVKKKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYLHEDLEWGEMYPLVKGLSKNKKKYLDKLSLF
Ga0308016_103621442	3300031695	Marine	VVKKKPNEVVYHVLAHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYLN
Ga0307995_10115946	3300031696	Marine	MVNNKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPSHQKYQHEDLEWGEMYPLVKGLSKNK
Ga0307995_11031031	3300031696	Marine	MIKNKPNEVVYHVLSHHIDHYVQTKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDL
Ga0307995_11250631	3300031696	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWG
Ga0307995_11676642	3300031696	Marine	MIKKKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYHHEDLEWGEMYPLVKGLS
Ga0307995_12259941	3300031696	Marine	VVKNKPNEVAYHVLAHHIDHYRQARKIFKTDYDSHMITITVFAHFLYGTLNPSHEKYQYQDLEWGEMYPLVKGLSKNKKKYLDKLTLFSISYILDMP
Ga0307995_12955921	3300031696	Marine	MTKSKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQYKHLEWGEMYPLVKGLSK
Ga0307998_10513993	3300031702	Marine	MEKKKPNEVVYHVLSHHIDHYRQAKKIFKTDYDSHMITIAVFTHFLYGTLNPSHKKY
Ga0307998_11103191	3300031702	Marine	MSKRDEVVYHMLSHHIDHYIQSKKIFKTDYDSHMITIAVFKHFLYGVLNPSHEKYQHEDLEWGEM
Ga0307998_11966002	3300031702	Marine	VIKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKF
Ga0308003_10862231	3300031705	Marine	MTKSKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLV
Ga0308013_101082473	3300031721	Marine	MIKNKPNEVVYHVLSHHIDHYRQTKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQQ
Ga0308013_101152343	3300031721	Marine	MVKSKPNEVAYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSH
Ga0308013_101534061	3300031721	Marine	MPKNKPNEVVYYVLSHHIDHYIQAKKIFKTDYDSHMITITVFAHFLYGTLKPSHEKYRHEDLEWGEMYPLVK
Ga0308013_102042692	3300031721	Marine	VVKSKPNEVVYHVLSHHIDHYRQCKKIFKSDYDSHMITITVFTHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGLSKN
Ga0308013_102273172	3300031721	Marine	VVKNKPNEVVYHVLSHHIDHYRQSKKIFKTDYDSHMITIAVFTHFLYGTLNPSHEKYQHE
Ga0308013_102559691	3300031721	Marine	MEKKKPNEIVYHVLSHHIDHYRQAKKIFKTDYDSHMITITVFAHFLYGTLNPSHEKYQHEDLEWGEMYPLVKGISKNK
Ga0308013_102619551	3300031721	Marine	MIKKLSIEVVYHLLSHHMEHYNLVRKIFKTDYDSHMISITAFVHFLYGNLNPSHEQYQHEDLEWG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087430

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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