Metagenome / Metatranscriptome Family F087426

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087426
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	91 residues
Representative Sequence	VADCPLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRVLGYAMAFRATGIRASSELAPPDLATMDFLYELGEIAAAGGDIRSRLFG
Number of Associated Samples	85
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	24.55 %
% of genes near scaffold ends (potentially truncated)	27.27 %
% of genes from short scaffolds (< 2000 bps)	80.91 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.091 % of family members)
Environment Ontology (ENVO)	Unclassified (33.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.97% β-sheet: 14.29% Coil/Unstructured: 48.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.127.1.2: HAL/PAL-like	d1gkma_	1gkm	0.60924
d.304.1.2: TTHA0281-like	d2dsya1	2dsy	0.58692
d.50.5.1: Rv2632c-like	d2fgga1	2fgg	0.57316
d.204.1.0: automated matches	d4fyla1	4fyl	0.57295
d.204.1.1: Ribosome binding protein Y (YfiA homologue)	d3v2cy_	3v2c	0.57192

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00884	Sulfatase	18.18
PF12710	HAD	2.73
PF12909	Obsolete Pfam Family	2.73
PF06305	LapA_dom	1.82
PF01609	DDE_Tnp_1	1.82
PF13385	Laminin_G_3	1.82
PF13191	AAA_16	0.91
PF03861	ANTAR	0.91
PF00196	GerE	0.91
PF10009	DUF2252	0.91
PF04101	Glyco_tran_28_C	0.91
PF02371	Transposase_20	0.91
PF04191	PEMT	0.91
PF00916	Sulfate_transp	0.91
PF06772	LtrA	0.91
PF00872	Transposase_mut	0.91
PF08378	NERD	0.91
PF01243	Putative_PNPOx	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.82
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.82
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.82
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	1.82
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.82
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.82
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.82
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	0.91
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	0.91
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	0.91
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.91
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.91
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.91
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.91

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.36 %
Unclassified	root	N/A	23.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.36 %
Unclassified	root	N/A	23.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.36 %
Unclassified	root	N/A	23.64 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.00 %
Unclassified	root	N/A	23.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.36 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58.18 %
Unclassified	root	N/A	23.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.36 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.64 %
Unclassified	root	N/A	23.64 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.36 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.64 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.36 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.82 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.82 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.91 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.91 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.64 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	7.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.36 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.82 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.91 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.91 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.64 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	7.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.36 %
Acrocarpospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora	0.91 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.91 %
Cryobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium	0.91 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.91 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.36 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	4.55 %
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	0.91 %
Acrocarpospora corrugata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata	0.91 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.91 %
Cryobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium	0.91 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.36 %
Solirubrobacter pauli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	4.55 %
Ktedonobacter sp. 13_1_20CM_4_53_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_20CM_4_53_11	0.91 %
Acrocarpospora corrugata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata	0.91 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.91 %
Cryobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium	0.91 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_11317894	Not Available	771	Open in IMG/M
3300000956\|JGI10216J12902_100970530	Not Available	1139	Open in IMG/M
3300000956\|JGI10216J12902_102282977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata	739	Open in IMG/M
3300000956\|JGI10216J12902_102322167	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300000956\|JGI10216J12902_105138550	Not Available	1582	Open in IMG/M
3300000956\|JGI10216J12902_117092634	Not Available	568	Open in IMG/M
3300000956\|JGI10216J12902_118768105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1201	Open in IMG/M
3300004463\|Ga0063356_100179015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2466	Open in IMG/M
3300005562\|Ga0058697_10037564	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1799	Open in IMG/M
3300006049\|Ga0075417_10002127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5828	Open in IMG/M
3300006194\|Ga0075427_10029283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	900	Open in IMG/M
3300006196\|Ga0075422_10068670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1315	Open in IMG/M
3300006847\|Ga0075431_100728817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M
3300006847\|Ga0075431_101585752	Not Available	612	Open in IMG/M
3300006852\|Ga0075433_10075752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2961	Open in IMG/M
3300006969\|Ga0075419_10009898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5915	Open in IMG/M
3300007076\|Ga0075435_100179918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1787	Open in IMG/M
3300009094\|Ga0111539_10033992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6186	Open in IMG/M
3300009100\|Ga0075418_10596478	Not Available	1189	Open in IMG/M
3300009147\|Ga0114129_11479172	Not Available	835	Open in IMG/M
3300009789\|Ga0126307_10060523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2969	Open in IMG/M
3300009789\|Ga0126307_10315280	Not Available	1259	Open in IMG/M
3300009801\|Ga0105056_1020706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300009809\|Ga0105089_1101243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300009810\|Ga0105088_1000018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8390	Open in IMG/M
3300009810\|Ga0105088_1058813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300009811\|Ga0105084_1020442	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300009815\|Ga0105070_1094786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300009822\|Ga0105066_1148418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300009836\|Ga0105068_1094033	Not Available	579	Open in IMG/M
3300009840\|Ga0126313_10027445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3870	Open in IMG/M
3300009840\|Ga0126313_10086556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2281	Open in IMG/M
3300009840\|Ga0126313_10292797	Not Available	1271	Open in IMG/M
3300009840\|Ga0126313_10788418	Not Available	772	Open in IMG/M
3300010036\|Ga0126305_10225687	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300010036\|Ga0126305_10793537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300010036\|Ga0126305_11225156	Not Available	518	Open in IMG/M
3300010038\|Ga0126315_10076362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1877	Open in IMG/M
3300010040\|Ga0126308_10081839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1945	Open in IMG/M
3300010040\|Ga0126308_10760876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300010041\|Ga0126312_10312586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1110	Open in IMG/M
3300010042\|Ga0126314_10168915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1532	Open in IMG/M
3300010044\|Ga0126310_10234462	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300010044\|Ga0126310_11864243	Not Available	502	Open in IMG/M
3300010166\|Ga0126306_10016720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4778	Open in IMG/M
3300012201\|Ga0137365_11083348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium	578	Open in IMG/M
3300012355\|Ga0137369_10036591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4436	Open in IMG/M
3300012358\|Ga0137368_10084015	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300012360\|Ga0137375_10701381	Not Available	827	Open in IMG/M
3300012937\|Ga0162653_100068373	Not Available	571	Open in IMG/M
3300014487\|Ga0182000_10047661	Not Available	1271	Open in IMG/M
3300018051\|Ga0184620_10094894	Not Available	912	Open in IMG/M
3300018066\|Ga0184617_1006821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_20CM_4_53_11	2117	Open in IMG/M
3300018078\|Ga0184612_10327999	Not Available	780	Open in IMG/M
3300018476\|Ga0190274_13969744	Not Available	501	Open in IMG/M
3300019767\|Ga0190267_10179846	Not Available	965	Open in IMG/M
3300020003\|Ga0193739_1008007	All Organisms → cellular organisms → Bacteria	2806	Open in IMG/M
3300022694\|Ga0222623_10152849	Not Available	898	Open in IMG/M
3300027006\|Ga0209896_1022575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	711	Open in IMG/M
3300027056\|Ga0209879_1009426	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300027209\|Ga0209875_1036884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300027277\|Ga0209846_1008807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1731	Open in IMG/M
3300027332\|Ga0209861_1023381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	919	Open in IMG/M
3300027379\|Ga0209842_1037987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300027511\|Ga0209843_1049455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	744	Open in IMG/M
3300027873\|Ga0209814_10011622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3470	Open in IMG/M
3300027952\|Ga0209889_1020774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1494	Open in IMG/M
3300027957\|Ga0209857_1014675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1552	Open in IMG/M
3300028711\|Ga0307293_10092889	Not Available	955	Open in IMG/M
3300028717\|Ga0307298_10096885	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300028718\|Ga0307307_10000232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12025	Open in IMG/M
3300028719\|Ga0307301_10050292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1282	Open in IMG/M
3300028719\|Ga0307301_10050417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1280	Open in IMG/M
3300028722\|Ga0307319_10055829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1243	Open in IMG/M
3300028722\|Ga0307319_10197188	Not Available	658	Open in IMG/M
3300028744\|Ga0307318_10129139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300028744\|Ga0307318_10291749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300028778\|Ga0307288_10052620	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300028791\|Ga0307290_10309005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300028791\|Ga0307290_10396917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300028793\|Ga0307299_10070505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1296	Open in IMG/M
3300028796\|Ga0307287_10038725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1723	Open in IMG/M
3300028796\|Ga0307287_10139143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300028807\|Ga0307305_10079474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1514	Open in IMG/M
3300028814\|Ga0307302_10009563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4341	Open in IMG/M
3300028814\|Ga0307302_10379726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300028828\|Ga0307312_11155470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	512	Open in IMG/M
3300028878\|Ga0307278_10002020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	9993	Open in IMG/M
3300028880\|Ga0307300_10090220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	915	Open in IMG/M
3300028881\|Ga0307277_10465047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	567	Open in IMG/M
3300028884\|Ga0307308_10551264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300028885\|Ga0307304_10412656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300030903\|Ga0308206_1137351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	579	Open in IMG/M
3300030905\|Ga0308200_1118780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	582	Open in IMG/M
3300030993\|Ga0308190_1148953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300031092\|Ga0308204_10106101	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300031114\|Ga0308187_10022181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1504	Open in IMG/M
3300031548\|Ga0307408_100099451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2213	Open in IMG/M
3300031548\|Ga0307408_100674088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	927	Open in IMG/M
3300031731\|Ga0307405_10158873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1598	Open in IMG/M
3300031731\|Ga0307405_10762014	Not Available	807	Open in IMG/M
3300031824\|Ga0307413_10016871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3789	Open in IMG/M
3300031824\|Ga0307413_10437261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1035	Open in IMG/M
3300031995\|Ga0307409_100609868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300031995\|Ga0307409_101462994	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300032002\|Ga0307416_100027105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4236	Open in IMG/M
3300032005\|Ga0307411_10117973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1914	Open in IMG/M
3300032126\|Ga0307415_100655725	Not Available	941	Open in IMG/M
3300032159\|Ga0268251_10407901	Not Available	590	Open in IMG/M
3300033550\|Ga0247829_11422944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter pauli	573	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.36%
Host-Associated	Host-Associated	23.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.73%
Plants	Host-Associated → Plants	23.64%
Aquatic	Environmental → Aquatic	3.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.91%
Sediment	Environmental → Aquatic → Sediment	3.64%
Phylloplane	Host-Associated → Plants → Phylloplane	1.82%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.91%
Sand	Environmental → Terrestrial → Soil → Sand	15.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.82%
Loam	Environmental → Terrestrial → Soil → Loam	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	49.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.91%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	15.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.09%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	15.45%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	15.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.73%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_113178942	3300000550	Soil	MAEFSLPLTVQELPGQVRLCLGGLARGEGPTLQDAAADLVQRLLTYVMAFRSSGVRVSPEFGPLDLAAMDFLYQLGEIAAAGGDSAAACSADRRDGDSPNR*
JGI10216J12902_1009705303	3300000956	Soil	VATCPLPLTVQELPGRIRLCLGDLARGDGLTLQAAADDLVQRPLVYAMAFRSSGLQFSTELGSPDLATMDFLYELGEIAAAGGDIRSHLFG*
JGI10216J12902_1022829772	3300000956	Soil	MAECPLPLTVQELPGRVRLRLGGLAHGDGSTLQDAADDLVQRLLTYAMALRASGFRTSPELGPPDLAAMELLYELGEIAAGGGDIRRRLFG*
JGI10216J12902_1023221672	3300000956	Soil	MMGYTAGVADCPLPLTVQESLGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYAMAFRASGFRPSLELAPPDLATMDFLYQLGEIAAAGGDIRSCLFS*
JGI10216J12902_1051385501	3300000956	Soil	VSTFTPPLTVQELPGRVRLWLGTLTHGTGSTLQDAADDLVQRLLGYAMALRARGLQASSDLGPPDLAAVGFLHELGEIAAAGGDIRQRLFS*
JGI10216J12902_1170926341	3300000956	Soil	GVPAGCVHLHTTLTVQELPGRIRLWLGTLTHGTGSTLQDAADDLVQRLLGYVMALRASGLPASSELGPPDLAAVGFLYELGEIAVAGGDIRQRLFG*
JGI10216J12902_1187681052	3300000956	Soil	MSTFTPPLTIQELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLSYAITLRTSGLRTSTELGPPDLAALGFLHELGEIAASGGDIRQRLFG*
Ga0063356_1001790152	3300004463	Arabidopsis Thaliana Rhizosphere	VSTFTPPLTVQELPGRVRLWLGTLTHGTGSTLQDAADDLVQRLLGYAMALRARGLPASSELGPPDLAAVGFLHELGEIAAAGGDIRQRLFS*
Ga0058697_100375643	3300005562	Agave	VAECPLPLTVQESYGRIRLCLGNLAHGDGPTLQDAADDLVQRLLTYAMAFRSSGVRVSSELGPVDLAAVDFLYQLGELAAAGGDIRRRLFG*
Ga0075417_100021274	3300006049	Populus Rhizosphere	VSTFTPPLTIHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGYTMALRGSGLPASSELGPPDPAAVGFLYELGEIAAGGGDIRQRLFG*
Ga0075427_100292831	3300006194	Populus Rhizosphere	VSTFTPPLTIHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGYTMALRGSGLPASSELGPPDPAAVGFLYELGEIAAGGGDFAELVEEAHGRRVG
Ga0075422_100686702	3300006196	Populus Rhizosphere	MLRLCPRSRHPLTVHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGYTMALRGSGLPASSELGPPDPAAVGFLYELGEIAAGGGDIRQRLFG*
Ga0075431_1007288172	3300006847	Populus Rhizosphere	VADGTLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYAMAFRASGVRPSFEMTPPDLAAMDLLYQLGDLAATGGDIRGRLFG*
Ga0075431_1015857521	3300006847	Populus Rhizosphere	ASVVSTFTPPLTIHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGYTMALRGSGLPASSELGPPDPAAVGFLYELGEIAAGGGDIRQRLFG*
Ga0075433_100757523	3300006852	Populus Rhizosphere	VSTFTPPLTIHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGYTMALRGSGLPASSELGPPDLAAMSFLYELGEIVAAGGDIRQRLFG*
Ga0075419_100098983	3300006969	Populus Rhizosphere	VSTFTPPLTIHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGYTMALRGSGLPASSELGPPDPAAVGFLYELGEIAAGGGDFRQRLFG*
Ga0075435_1001799182	3300007076	Populus Rhizosphere	VSTFTPPLTVHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGYTMALRGSGLPASSELGPPDLAAMSFLYELGEIVAAGGDIRQRLFG*
Ga0111539_100339923	3300009094	Populus Rhizosphere	LTIHELPGRVRLCLGSLTHGTGPTLQDAADDLVQRLLGYTMALRGSGLPASSELGPPDPAAVGFLYELGEIAAGGGDLRQRLFG*
Ga0075418_105964781	3300009100	Populus Rhizosphere	LTIHELPGRVRLCLGTLTHGTGPTLQNAADDLVQRLLGYTMALRGSGLPASSELGPPDPAAVGFLYELGEIAAGGGDIRQRLFG*
Ga0114129_114791721	3300009147	Populus Rhizosphere	LTIHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGYTMALRGSGLPASSELGPPDPAAVGFLYELGEIAAGGGDIRQRLFG*
Ga0126307_100605232	3300009789	Serpentine Soil	VSTFTPPLTVHELSGRVRLRLGTLTHGTGPTLQDAADDLVQRLLGYAMAIRASGLPASSELGPPDLAAVGFLYELGEIAAAGGDIRQRLFG*
Ga0126307_103152802	3300009789	Serpentine Soil	PLTVQESPGRVRLCLGSLAHGDGFTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDLAAMDLLYQLGELAATGGDIRGRLFG*
Ga0105056_10207061	3300009801	Groundwater Sand	MVANCPLPLTVQESPGRVRLRLGGLAHGDGPTLQDAADDLVQRLLTYAMAFRATGIRPSLELAPPDLATMDFLYELGEIAAAGGDIRRHLFD*
Ga0105089_11012431	3300009809	Groundwater Sand	MVANCPLPLTVQESPGRVRLRLGGLAHGDGPTLQDAADDLVQRLLTYAMAFRATGIRPSLELAPPDLATMDFLYQLGEIAAAGGDIRRHLFD*
Ga0105088_10000188	3300009810	Groundwater Sand	VADCPLPLTVQESSGRVRLCLGGLAHGDGPTLQDAADDLVQRLLTYAMAFRATGIRPSLELAPPDLATMDFLYELGEIAAAGGDIRRHLFD*
Ga0105088_10588131	3300009810	Groundwater Sand	VANGTLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRLLSYVMALRASGFRPSLELAPLDLPTMDYLYELGEIAAAGGDIRSRLFG*
Ga0105084_10204421	3300009811	Groundwater Sand	TGMVANCPLPLTVQESPGRVRLRLGGLAHGDGPTLQDAADDLVQRLLTYAMAFRATGIRPSLELAPPDLATMDFLYELGEIAAAGGDIRRHLFD*
Ga0105070_10947861	3300009815	Groundwater Sand	SSGRVRLCLGSLAHGDGPTLQDAADDLVQRLLSYVMALRASGFRPSLELAPLDLPTMDYLYELGEIAAAGGDIRSRLFG*
Ga0105066_11484181	3300009822	Groundwater Sand	PRTAMGYIALVANGTLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRLLSYVMALRASGFRPSLELAPLDLPTMDYLYELGEIAAAGGDIRSRLFG*
Ga0105068_10940332	3300009836	Groundwater Sand	MVANCPLPLTVQESPGRVRLRLGGLAHGDGPTLQDAAEDLVQHLLTYAMAFRASGFRASPELGPPDLAAMDLPYELGDVAAAGGDIGSRLFS*
Ga0126313_100274451	3300009840	Serpentine Soil	VADCPLPLTVQEAPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLSYAMAFRASGMRAPLELGPPDVAAMDFLYQLGEIAAAGGDIRRRLFD*
Ga0126313_100865562	3300009840	Serpentine Soil	LTVHELPGRVRLCLGALTHGTGPTLQDAADDLVQRLLGYAMAIRASGLPASSKLGPPDLAAVGFLYELGEIAAAGGDIRQRLFG*
Ga0126313_102927972	3300009840	Serpentine Soil	VADGTLPLTVQESPGRVRLWFGSLAHGDGPTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDLAAMDLLYQLGELAATGGDIRGRLFG*
Ga0126313_107884181	3300009840	Serpentine Soil	VSTFAPPLTIHELPGRVRLCLGTLSHGTGPTLQDAADDLVQRLLGYAMALRASGLPASSELGPPDLAVVGFLYELGEIAASGGDIRQRLFG*
Ga0126305_102256872	3300010036	Serpentine Soil	VADGTLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDLAAMNLLYQLGELAATGGDIRGRLFG*
Ga0126305_107935372	3300010036	Serpentine Soil	VADCPLPLTVQEAPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLSYAMAFRASGMRAPLELGPPDVAAMDFLYQLGEIAAAGGDIRGRLFG*
Ga0126305_112251561	3300010036	Serpentine Soil	VSTFTPPLTVHELSGRVRLRLGTLTHGTGPTLQDAADDLVQRLLGYAMAIRASGLPASSKLGPPDLAAVGFLYELGVIAASGGDIRQRLFG*
Ga0126315_100763623	3300010038	Serpentine Soil	VADGTLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDLAAMDLLYQLGELAATGGDIRGRLFG*
Ga0126308_100818392	3300010040	Serpentine Soil	VADGTLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDMAAMDLLYQLGELAATGGDIRGRLFG*
Ga0126308_107608761	3300010040	Serpentine Soil	LTIHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLSYAMALRASGLPASSELGPPDLAAVGFLYELGEIAASGGDIRQRLFG*
Ga0126312_103125862	3300010041	Serpentine Soil	VSTFTPPLTVHELSGRVRLRLGTLTHGTGPTLQDAADDLVQRLLGYAMAIRASGLPASSKLGPPDLAAVGFLYELGEIAAAGGDIRQRLFG*
Ga0126314_101689152	3300010042	Serpentine Soil	VADGTLPLTVQESPGRVRLCLGSLAHGDGFTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDMAAMDLLYQLGELAATGGDIRGRLFG*
Ga0126310_102344622	3300010044	Serpentine Soil	LTIHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGYAMAIRASGLPASSKLGPPDLAAVGFLYELGEIAAAGGDIRQRLFG*
Ga0126310_118642432	3300010044	Serpentine Soil	TVQESPGRVRLCLGSLAHGDGPTLQAAADDLVQRLLTYVMAFRATGIRASGELAPPDLATMDYLYELGEIAAAGGDIRSHLFG*
Ga0126306_100167203	3300010166	Serpentine Soil	VADCSLPLTVQESPGRVRLCLGSLAHGDGFTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDLAAMDLLYQLGELAATGGDIRGRLFG*
Ga0137365_110833481	3300012201	Vadose Zone Soil	VWGTRGLVFAFTPPLTVQELPGRVRLCLGTLAHGTGPTLQDAADDLVQRLLGYAMTLRASGLQASSELGPPDPAAVGFLYQLGEIAAAGGDIRQRLFG*
Ga0137369_100365913	3300012355	Vadose Zone Soil	VAECTPPLTVRESCGRVRLCLGNLAHGDGPRLQDAADDLVQRLLTYVMAFRSSGVRVSPELGPVDLAAMDFLFELGEIAAAG
Ga0137368_100840153	3300012358	Vadose Zone Soil	VAECTPPLTVRESCGRVRLCLGNLAHGDGPRLQDAADDLVQRLLTYVMAFRSSGVRVSPELGPVDLAAMDFLFELGEIAAAGGDIRRRLFG*
Ga0137375_107013812	3300012360	Vadose Zone Soil	VANGTLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRLLSYVMALRASGFRPSLELAPLDLPTMDYLYELGEIAAAGGDIRSRRFG*
Ga0162653_1000683731	3300012937	Soil	VGIQGFVATCPLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYVMAFRATGIRASGELAPPDLAIMDYLYELGEIAAAGGDIRSHLFG*
Ga0182000_100476611	3300014487	Soil	LTPPLTVQELPGRVRLCLGTLSHGTGATLQDAADDLVQRLLGYAMALRASGLQASSELGPPDLAAVGFLYELGEIAAAGGDIRSRLFG*
Ga0184620_100948942	3300018051	Groundwater Sediment	VVPLLAPVPFLGYPELVATCPLPSTLQEFPGRVRLCLGDLARGDGFTLQAAADDLVQRLLVYAMAFRSSGLRLSTELGAPDLATMDFLYELGEIAAAGGDIHSRLFG
Ga0184617_10068212	3300018066	Groundwater Sediment	LTVQEFPGRVHLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLRLSTELGAPDLATMDFLYELGEIAAAGGDIRSRLFG
Ga0184612_103279991	3300018078	Groundwater Sediment	LLLRAALGYTAVVADCPLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLGYVLAFRATGFRPSRELAPPDLATMDFLYQLGEIAAAGGDIRSRLFG
Ga0190274_139697442	3300018476	Soil	SAATGYVPGVADCPMPLTVQESSGRVRLWLGTLVHGEGPTLQDAADDLVQRLLTYVMAFRASGFRPSLELAPPDLAAIDFLYQLGEIAAAGDDIRSRLFS
Ga0190267_101798462	3300019767	Soil	VATCPLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYVMAFRATGIRASGELAPPDLATMDFLYELGEIAAAGGDIRSHVFG
Ga0193739_10080073	3300020003	Soil	VATCPLPLTVQELPGRIRLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSRLQLSTELGAPDLATMDFLYELGEIATAGGDIRSRLFG
Ga0222623_101528491	3300022694	Groundwater Sediment	VADCPLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRVLGYAMAFRATGIRASSELAPPDLATMDFLYELGEIAAAGGDIRSRLFG
Ga0209896_10225751	3300027006	Groundwater Sand	TVQESPGRVRLRLGGLAHGDGPTLQDAADDLVQRLLTYAMAFRATGIRPSLELAPPDLATMDFLYELGEIAAAGGDIRRHLFD
Ga0209879_10094262	3300027056	Groundwater Sand	LRSAREPVDRALLPACGDGVYTGMVANCPLPLTVQESPGRVRLRLGGLAHGDGPTLQDAADDLVQRLLTYAMAFRATGIRPSLELAPPDLATMDFLYELGEIAAAGGDIRRHLFD
Ga0209875_10368842	3300027209	Groundwater Sand	MGYIALVANGTLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRLLSYVMALRASGFRPSLELAPLDLPTMDYLYELGEIAAAGGDIRSRLFG
Ga0209846_10088073	3300027277	Groundwater Sand	VADCPLPLTVQESSGRVRLCLGGLAHGDGPTLQDAADDLVQRLLAYVMAFRATGFRPSLELAPPDLATMDFLYELGEIAAAGGDIRSRLFV
Ga0209861_10233812	3300027332	Groundwater Sand	MVANCPLPLTVQESPGRVRLRLGGLAHGDGPTLQDAADDLVQRLLTYAMAFRATGIRPSLELAPPDLATMDFLYELGEIAAAGG
Ga0209842_10379872	3300027379	Groundwater Sand	PACFPRTAMGYIALVANGTLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRLLSYVMALRASGFRPSLELAPLDLPTMDYLYELGEIAAAGGDIRSRLFG
Ga0209843_10494552	3300027511	Groundwater Sand	CPLPLTVQESSGRVRLCLGGLAHGDGPTLQDAADDLVQRLLAYVMAFRATGFRPSLELAPPDLATMDFLYELGEIAAAGGDIRSRLFV
Ga0209814_100116222	3300027873	Populus Rhizosphere	VSTFTPPLTIHELPGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGYTMALRGSGLPASSELGPPDPAAVGFLYELGEIAAGGGDIRQRLFG
Ga0209889_10207743	3300027952	Groundwater Sand	GTLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRLLSYVMALRASGFRPSLELAPLDLPTMDYLYELGEIAAAGGDIRSRLFG
Ga0209857_10146752	3300027957	Groundwater Sand	MVANCPLPLTVQESPGRVRLRLGGLAHGDGPTLQDAADDLVQRLLTYAMAFRATGIRPSLELAPPDLATMDFLYELGE
Ga0307293_100928892	3300028711	Soil	VPLLGYPELVATCPLPLTVQEFPGRVRLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSNGFQLSTELAPPDLATMDFLYELGEIAVAGGDIRSHLFG
Ga0307298_100968851	3300028717	Soil	VPLLGYPELVATCPLPLTVQEFPGRVRLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSNGFQLSTELAPPDLATMDFLYELGEIAVAGGDIRSRLFG
Ga0307307_100002322	3300028718	Soil	VATCPLPLTVQEFPGRVRLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSNGFQLSTELAPPDLATMDFLYELGEIAVAGGDIRSHLFG
Ga0307301_100502922	3300028719	Soil	VATCPLPLTVQEFPGRVHLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLRLSTELGAPDLATMDFLYELGEIAAAGGDIRSRLFG
Ga0307301_100504172	3300028719	Soil	VATCPLPLTVQESPGRVRLCLGDLARGDGPTLQDAADDLVQRLLTYVMAFRATGIRASGELAPPDLATMDYLYQLGEIAAAGGDIRSHLFG
Ga0307319_100558291	3300028722	Soil	VATCPLPLTVQELPGRVRLCLGDLARGDGFTLQAAADDLVQRLLVYAMAFRSSGLQVSPELGAPDLATMDFLYELGEIAAAGGDLRSHLFG
Ga0307319_101971882	3300028722	Soil	VADCTLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRVLGYAMAFRATGIRASSELAPPDLATMDFLYELGEIAAAGGDIRSRLFG
Ga0307318_101291392	3300028744	Soil	VATCPLPLTVQEFPGRVHLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLRLSTELGAPDLATMDFLYELGEIAAAGGDLRSRLFG
Ga0307318_102917491	3300028744	Soil	VATCPLPLTVQESPGRVRLCLGDLAHGDGPTLQDAADDLVQRLLTYVMAFRATGIRASGELAPPDLATMDYLYELGEIAAAGGDIRSHLFG
Ga0307288_100526202	3300028778	Soil	MGYTEGVADCPLPLTVQEAPGRVRLYLGSLAHGDGPTLQDAADDLVQHLLTYAMAFRASGFRPSLELAPPDLATMDFLYQLGEIAAAGGDIRSRLFS
Ga0307290_103090052	3300028791	Soil	VATCPLPLTVQEFPGRVHLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLRLSTELGAPDLATMDFLYELGEIAAAGGDIRSRL
Ga0307290_103969172	3300028791	Soil	VATCPLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQCLLTYVMAFRATGIRASGELAPPDLATMDYLYQLGEIAAAGGDIRSHLFG
Ga0307299_100705053	3300028793	Soil	PGRVRLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSNGFQLSTELAPPDLATMDFLYELGEIAVAGGDIRSHLFG
Ga0307287_100387252	3300028796	Soil	VATCPLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYVMAFRATGIRASGELAPPDLATMDYLYQLGEIAAAGGDIRSHLFG
Ga0307287_101391432	3300028796	Soil	VATCPLPLTIQEFPGRVRLCLGDLARGDGFTLQAAADDLVQRLLVYAMALRSSGFQFSTELGAPDLATMDFLYELGEVAAAGGDIRSHVFG
Ga0307305_100794743	3300028807	Soil	LVATCPLPLTVQEFPGRVRLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSNGFQLSTELAPPDLATMDFLYELGEIAVAGGDIRSHLFG
Ga0307302_100095634	3300028814	Soil	MVADCTLPLTVQESPGRVRLRLGSLAHGDGPTLQDAADDLVQRLLSYVVAFRATGIRPSLELAPPDLAAMDFLYELGEIAATGGDIRSRLFG
Ga0307302_103797261	3300028814	Soil	VANGPLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRLLAYVMAFRATGIRPSLELAPPDLATMDFLYQLGEIAAAGGDIRSRLFG
Ga0307312_111554701	3300028828	Soil	RVHLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLRLSTELGAPDLATMDFLYELGEIAAAGGDIRSRLFG
Ga0307278_100020205	3300028878	Soil	LTVQEFPGQVRLRLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLQFSAELGAPDLATMDFLYELGEIAAAGGDIRSRLFG
Ga0307300_100902201	3300028880	Soil	LLLRAALGYTAVVADCPLPLTVQESSGRVRLCLGSLAHGDGPTLQDAADDLVQRVLGYAMAFRATGIRASSELAPPDLATMDFLYELGEIAAAGGDIRSRLFG
Ga0307277_104650471	3300028881	Soil	LPRSHCGYPGLVATCPLPLTVQEFPGQVRLRLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLQFSAELGAPDLATMDFLYELGEIAAAGGDIRSRLFG
Ga0307308_105512641	3300028884	Soil	VATCPLPLTVQEFPGRVHLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLRLSTELGAPDLATMDFLYELGEIAAAGGDIRSHLFG
Ga0307304_104126561	3300028885	Soil	VATCSLPLTVQEFPGRVHLCLGDLARGDGLTLQDAADDLVQRLLVYALAFRSSGLRLSTELGAPDLATMDFLYELGEIAAAGGDIRSRL
Ga0308206_11373511	3300030903	Soil	LPLTVQEFPGRVHLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLRLSTELGAPDLATMDFLYELGEIAAAGGDIRSRLFG
Ga0308200_11187801	3300030905	Soil	VVPLLAPVPFLGYPGLVATCPLPLTVQEFPGRVHLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLRLSTELGAPDLATMDFLYELGEIAAAGGDIRSRLFG
Ga0308190_11489532	3300030993	Soil	VVPLLAPVPFLGYPGLVATCPLPLTVQEFPGRVHLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSSGLRLSTELGAPDLATMDFLYELGDIRSRLFG
Ga0308204_101061012	3300031092	Soil	CPLPLTVQESPGRVRLCLGSLAHSDGPTLQDAADDLVQRLLTYVMAFRATGIRASGELAPPDLATMDYLYQLGEIAAAGGDIRSHLFG
Ga0308187_100221812	3300031114	Soil	LTVQEFPGRVRLCLGDLARGDGLTLQDAADDLVQRLLVYAMAFRSNGFQLSTELAPPDLATMDFLYELGEIAVAGGDIRSHLFG
Ga0307408_1000994512	3300031548	Rhizosphere	VADCPLPLTVQEAPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLSYAMAFRASGMRAPLELGPPDVAAMDFLYQLGEIAAAGGDIRRRLFD
Ga0307408_1006740882	3300031548	Rhizosphere	MGYTAGVADCSLPLTVQEAPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDMAAMDLLYQLGELAATGGDIRGRLFG
Ga0307405_101588732	3300031731	Rhizosphere	VADGTLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDLAAMDLLYQLGELAA
Ga0307405_107620142	3300031731	Rhizosphere	LPGAAWGTCQFVSTFTPPLTVHELPGRVRLCLGALTHGTGPTLQDAADDLVQRLLGYAMAIRASGLPASSELGPPDLAAVGFLYELGEIAALGGDIRQRLFG
Ga0307413_100168712	3300031824	Rhizosphere	VADGTLPLTVQESPGRVRLCLGSLAHGDGPTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDMAAMDLLYQLGELAATGGDIRGRLFG
Ga0307413_104372612	3300031824	Rhizosphere	VSTFTPPLTVHELSGRVRLCLGTLTHGTGPTLQDAADDLVQRLLGHAMAIRASGLPASSELGPPDLAAVGFLYELGEIAAAGGDIRQRLFG
Ga0307409_1006098682	3300031995	Rhizosphere	MGYTAAVTVCPLPLTVQESLGRVRLCLGSLAHGDGPTLQDAADDLVQRLLIYAMAFRATGFQPACELGPPDLAAIDFLYQLGEIAADGSDIRSHVFS
Ga0307409_1014629942	3300031995	Rhizosphere	VGYAAGVADCSLPLTVQESPGRVRLCLGSLAHGDGFTLQDAADDLVQRLLTYAMAFRASGLRPSLEMAPPDLAAMDLLYQLGELAATGGDIRGRLFG
Ga0307416_1000271053	3300032002	Rhizosphere	LTVHELPGRVRLCLGALTHGTGPTLQDAADDLVQRLLGYAMAIRASGLPASSELGPPDLAAVGFLYELGEIAALGGDIRQRLFG
Ga0307411_101179732	3300032005	Rhizosphere	LTVHELPGRVRLCLGALTHGTGPTLQDAADDLVQRLLGYAMALRGSGLPASSELGPPDLAAVGFLYELGEIAALGGDIRQRLFG
Ga0307415_1006557251	3300032126	Rhizosphere	AAVTVCPLPLTVQESLGRVRLCLGSLAHGDGPTLQDAADDLVQRLLIYAMAFRATGFQPACELGPPDLAAIDFLYQLGEIAADGSDIRSHVFS
Ga0268251_104079011	3300032159	Agave	VAECPLPLTVQESYGRIRLCLGNLAHGDGPTLQDAADDLVQRLLTYAMAFRSSGVRVSSELGPVDLAAVDFLYQLGELAAAGGDIRRRLFG
Ga0247829_114229441	3300033550	Soil	CRCGYKGRVATCPLPLTVQELPGRVRLCLGDLARGDGPTLQDAADDLVQRLLTYVLAFRATGIRASRELAPLDLATMDFLYELGEIAAAGGDIRTRLFD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087426

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences