Metagenome / Metatranscriptome Family F087370

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087370
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	140 residues
Representative Sequence	NYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALKEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEDGGERPVLQGLRFTLFKKSGLQTVVTSLQ
Number of Associated Samples	89
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.64 %
% of genes near scaffold ends (potentially truncated)	90.00 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.545 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (10.909 % of family members)
Environment Ontology (ENVO)	Unclassified (69.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.091 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 1.81% β-sheet: 23.49% Coil/Unstructured: 74.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF14559	TPR_19	17.27
PF13432	TPR_16	11.82
PF13414	TPR_11	6.36
PF13374	TPR_10	2.73
PF13464	DUF4115	1.82
PF13561	adh_short_C2	0.91
PF12895	ANAPC3	0.91
PF06213	CobT	0.91
PF13371	TPR_9	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG4547	Cobalamin biosynthesis cobaltochelatase CobT subunit	Coenzyme transport and metabolism [H]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.82 %
Unclassified	root	N/A	15.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	66.36 %
Unclassified	root	N/A	15.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.36 %
Unclassified	root	N/A	15.45 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.55 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.36 %
Unclassified	root	N/A	15.45 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	4.55 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.91 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.36 %
Unclassified	root	N/A	15.45 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	4.55 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.36 %
Unclassified	root	N/A	15.45 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	4.55 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.91 %
Saccharomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.36 %
Unclassified	root	N/A	15.45 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	4.55 %
Saccharomonospora cyanea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora cyanea	0.91 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17034843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
2228664022\|INPgaii200_c0737475	Not Available	787	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104352127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300000891\|JGI10214J12806_11408428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora cyanea	561	Open in IMG/M
3300004803\|Ga0058862_11734542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300005331\|Ga0070670_102255368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	502	Open in IMG/M
3300005340\|Ga0070689_100462412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300005364\|Ga0070673_101723215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	593	Open in IMG/M
3300005434\|Ga0070709_10507578	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005434\|Ga0070709_10588677	Not Available	855	Open in IMG/M
3300005434\|Ga0070709_11668908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005436\|Ga0070713_100044809	All Organisms → cellular organisms → Bacteria	3622	Open in IMG/M
3300005436\|Ga0070713_100062455	All Organisms → cellular organisms → Bacteria	3120	Open in IMG/M
3300005437\|Ga0070710_10602734	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300005459\|Ga0068867_100743976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300005459\|Ga0068867_101310211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300005530\|Ga0070679_101440068	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	635	Open in IMG/M
3300005530\|Ga0070679_101457243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	631	Open in IMG/M
3300005535\|Ga0070684_101394995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300005543\|Ga0070672_101304448	Not Available	648	Open in IMG/M
3300005577\|Ga0068857_100354438	All Organisms → cellular organisms → Bacteria → Acidobacteria	1359	Open in IMG/M
3300005578\|Ga0068854_101423072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005614\|Ga0068856_101656729	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300005615\|Ga0070702_100740081	Not Available	754	Open in IMG/M
3300005616\|Ga0068852_102389410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300005617\|Ga0068859_100278991	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300005617\|Ga0068859_102040589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300005618\|Ga0068864_100939847	Not Available	855	Open in IMG/M
3300005719\|Ga0068861_100566690	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005829\|Ga0074479_10226657	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005836\|Ga0074470_10077065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300005841\|Ga0068863_100922666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300005842\|Ga0068858_100113308	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
3300005842\|Ga0068858_101530401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300006050\|Ga0075028_100854070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300006237\|Ga0097621_100119756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2231	Open in IMG/M
3300006358\|Ga0068871_101436377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300006796\|Ga0066665_10520330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300006854\|Ga0075425_102693544	Not Available	548	Open in IMG/M
3300006881\|Ga0068865_100264372	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300009093\|Ga0105240_11879479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300009098\|Ga0105245_10291928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1597	Open in IMG/M
3300009098\|Ga0105245_10854676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300009098\|Ga0105245_11746382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300009101\|Ga0105247_10272955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300009101\|Ga0105247_11414591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300009148\|Ga0105243_12391369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300009176\|Ga0105242_12276299	Not Available	588	Open in IMG/M
3300009177\|Ga0105248_10906263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300009177\|Ga0105248_11455277	Not Available	775	Open in IMG/M
3300009545\|Ga0105237_10178432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2124	Open in IMG/M
3300009551\|Ga0105238_11855340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300009553\|Ga0105249_12990821	Not Available	543	Open in IMG/M
3300010375\|Ga0105239_10671551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300010375\|Ga0105239_12074853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300010396\|Ga0134126_12013749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300010403\|Ga0134123_13207227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300012211\|Ga0137377_10881095	Not Available	827	Open in IMG/M
3300012961\|Ga0164302_11318654	Not Available	584	Open in IMG/M
3300013296\|Ga0157374_11010759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300013296\|Ga0157374_12427904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300013306\|Ga0163162_12019464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300013306\|Ga0163162_12367409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300013308\|Ga0157375_10193948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2186	Open in IMG/M
3300013308\|Ga0157375_10394842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1550	Open in IMG/M
3300014325\|Ga0163163_10099320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2932	Open in IMG/M
3300014325\|Ga0163163_12971989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300014968\|Ga0157379_12593329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300017959\|Ga0187779_10597318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300017966\|Ga0187776_10880871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300020579\|Ga0210407_10680372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300025898\|Ga0207692_10718668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300025900\|Ga0207710_10068022	All Organisms → cellular organisms → Bacteria → Proteobacteria	1628	Open in IMG/M
3300025906\|Ga0207699_11002242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300025911\|Ga0207654_10963077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300025913\|Ga0207695_11323448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300025916\|Ga0207663_11015777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300025916\|Ga0207663_11295539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300025921\|Ga0207652_11264677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300025924\|Ga0207694_10085984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2475	Open in IMG/M
3300025927\|Ga0207687_10813506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300025927\|Ga0207687_11160278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300025927\|Ga0207687_11273517	Not Available	632	Open in IMG/M
3300025934\|Ga0207686_11280034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300025935\|Ga0207709_11359327	Not Available	588	Open in IMG/M
3300025941\|Ga0207711_10532477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300025941\|Ga0207711_11059697	Not Available	751	Open in IMG/M
3300025942\|Ga0207689_11190033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300025949\|Ga0207667_10412789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1374	Open in IMG/M
3300025961\|Ga0207712_11943907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300025981\|Ga0207640_10079614	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300026035\|Ga0207703_10837861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300026078\|Ga0207702_11582663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300026088\|Ga0207641_11522629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300026095\|Ga0207676_10843355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300026116\|Ga0207674_10185701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2030	Open in IMG/M
3300026118\|Ga0207675_100550356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1153	Open in IMG/M
3300026118\|Ga0207675_101976501	Not Available	601	Open in IMG/M
3300026121\|Ga0207683_10107545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2495	Open in IMG/M
3300026142\|Ga0207698_10349687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1396	Open in IMG/M
3300028047\|Ga0209526_10741976	Not Available	614	Open in IMG/M
3300028379\|Ga0268266_10496378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300028906\|Ga0308309_11642565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300030294\|Ga0311349_12130986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300031235\|Ga0265330_10188644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300031366\|Ga0307506_10102759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300031720\|Ga0307469_12087871	Not Available	551	Open in IMG/M
3300031938\|Ga0308175_101989498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300033412\|Ga0310810_10623549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300033513\|Ga0316628_102196736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	64.55%
Environmental	Environmental	35.45%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	63.64%
Terrestrial	Environmental → Terrestrial	32.73%
Aquatic	Environmental → Aquatic	2.73%
Human	Host-Associated → Human	0.91%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.55%
Soil	Environmental → Terrestrial → Soil	31.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.45%
Roots	Host-Associated → Plants → Roots	3.64%
Sediment	Environmental → Aquatic → Sediment	2.73%
Peat	Environmental → Terrestrial → Peat	0.91%
Digestive System	Host-Associated → Human → Digestive System	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	30.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	24.55%
Loam	Environmental → Terrestrial → Soil → Loam	16.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.91%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	30.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	24.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.55%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	10.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	9.09%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.18%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	8.18%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.73%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.91%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00973210	2088090014	Soil	RATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ
INPgaii200_07374751	2228664022	Soil	RATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ
INPhiseqgaiiFebDRAFT_1043521271	3300000364	Soil	RRTAYVRGSSAPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAARLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLRFTLFKKSGLQTVVTSLQ*
JGI10214J12806_114084281	3300000891	Soil	WSRRTAYLVGATNPREILVYSGSDDVKNYRVEFAWVPDPRGVGLIFRATDSANYYAAKLRLMQAGATPTLSAEHFTVVKGVEGTHSRKVITLGRTQREVLVRMDATGPAFTLFLQGIPADYWTDEQFEAGSLGFYEERGERPALKALRFTLFKKSGLQTVVTSLQ*
Ga0058862_117345421	3300004803	Host-Associated	AANLHLLQSGATPTLSAEHFAVVNGVEGAHTRKVITLGRTLGQVLVRMDANGPAFTLYLQGTPADYWTDERFESGSLGFYEDQGNRPALQSLRFTFYKKSGLQTVVTSLQ*
Ga0070670_1022553681	3300005331	Switchgrass Rhizosphere	LRGTDSANYYAAKLRLLQAGATPSLSAEHFAVVQGVEGTHSRKVLTLGRTKGEVQVRMDAEGPAFTLYLQGSPADYWTDERFEKGSLGFYAERGERPVLEGLRFTFFRKSGLQTVVTSLQ
Ga0070689_1004624121	3300005340	Switchgrass Rhizosphere	NYYAAKLRLMQAGATPTLSAEHFTVVKGVEGTHSRKVITLGRTQREVLVRMDATGPAFTLFLQGIPADYWTDEQFEAGSLGFYEERGERPALKALRFTLFKKSGLQTVVTSLQ*
Ga0070673_1017232151	3300005364	Switchgrass Rhizosphere	AGTWSRRTAYVVGGTVPREILIYSGAEDVKNYRIEFSWVPDTRGVGWLFRGTDSANYYAAKLRLAAAGATPSLSAEHFAVVQGVEGTHSRKVLTLGRTKGEVQVRMDAEGPAFTLYLQGSPADYWTDERFEKGSLGFYAERGERPVLEGLRFTFFRKSGLQTVVTSLQ*
Ga0070709_105075781	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	NYRIEFGWVPDTRGVGWIFRGIDSANYYAANLRLIQPGATASLSAEHFAVVKGVEGVHSRRVITLGQNRGQVKVRMDANGPAFTLYLQGNPADYWTDERFETGSLGFYAERGERPELQALRFTFFKKSGLQTVVTSLQ*
Ga0070709_105886772	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	KLRLMQAGATPTLSAEHFTVVKGVEGTHSRKVITLGRTNSEVLVRMDVLGPAFTLNLQGSPADYWTDERFDSGSLGFYEERGERPVLQALRFTLFKKSGLQTVVTSLQ*
Ga0070709_116689081	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PEPRGVGWIFRATDSANYYAARLRLVQAGAIPTLSAEHFAVVKGVEGPHSRKVITLSRALSGVSVRMDATGPAFTLYLQGNPADYWTDERFEAGSLGFYEERGERPVLQGLRFTLFKKSGLQTVTTSLQ*
Ga0070713_1000448093	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAYMVGGKQPREILIYSGSEDVKNYRIEFGWVPDTRGVGWIFRGIDSANYYAANLRLIQPGATASLSAEHFAVVKGVEGAHSRRVITLGQNRGQVKVRMDANGPAFTLYLQGNPADYWTDERFETGSLGFYAERGERPELQALRFTFFKKSGLQTVVTSLQ*
Ga0070713_1000624551	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RIEFSWVPEPRGVGWIFRATDSANYYAARLRLVQAGAIPTLSAEHFAVVKGVEGPHSRKVITLSRALSGVSVRMDATGPAFTLYLQGNPADYWTDERFEAGSLGFYEERGERPVLQGLRFTLFKKSGLQTVTTSLQ*
Ga0070710_106027341	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SEDVKNYRIEFAWTPDARGVGWLFRGTDSANYYGARLRLIQSGATPTLSAEHFSVVKGVEGAHARKVITLGRTPGQVMVRMDANGPAFTLYLQGSPTDYWTDDRFETGSLGFYADRGERPVLQSIRFTFFKKSGLQTVVTSLQ*
Ga0068867_1007439762	3300005459	Miscanthus Rhizosphere	VPDTRGVGWLFRGTDSANYYAAKLRLVQAGSTPSLSAEHFAVVKGVEGPHSRKVITVGRTLGQVLVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYGEPGERPVLQTLRFTFFKKSGLQTVVTSLQ*
Ga0068867_1013102111	3300005459	Miscanthus Rhizosphere	NYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALKDVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPEVQGLRFTLFKKSGLQTVVTSLQ*
Ga0070679_1014400681	3300005530	Corn Rhizosphere	AAGTWSRRTAYVMGSSVPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ*
Ga0070679_1014572431	3300005530	Corn Rhizosphere	NTSPGTWSRRTAYVTGSSAPREILVYSGSDNLKNYRIEFSWVPEPRGVGWIFRATDSANYYAARLRLVQAGAIPTLSAEHFAVVKGVEGPHSRKVITLSRALSGVSVRMDATGPAFTLYLQGNPADYWTDERFEAGSLGFYEERGERPVLQGLRFTLFKKSGLQTVTTSLQ*
Ga0070684_1013949951	3300005535	Corn Rhizosphere	ILIYSGSEDVKNYRIEFAWVPDTRGVGWLFRGTDSANYYAAKLRLVQAGSTPSLSAEHFAVVQGVEGPHSRKVITLGRTLGQVLVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYGDRGERPILQTLRFTFFRKSGLQTVVTSLQ*
Ga0070672_1013044482	3300005543	Miscanthus Rhizosphere	TDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ*
Ga0068857_1003544383	3300005577	Corn Rhizosphere	DSANYYAAKLRLVQAGSTPSLSAEHFAVVKGVEGPHSRKVITVGRTLGQVLVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYGEPGERPVLQTLRFTFFKKSGLQTVVTSLQ*
Ga0068854_1014230722	3300005578	Corn Rhizosphere	GSESAPAAAGTWSRRTAYLVGATNPREILVYSGSDDVKNYRVEFAWVPDPRGVGLIFRATDSANYYAAKLRLMQAGATPTLSAEHFTVVKGVEGTHSRKVITLGRTQREVLVRMDATGPAFTLFLQGIPADYWTDEQFEAGSLGFYEERVERPALRALRFTLFRKSGLQTVVTSLQ*
Ga0068856_1016567291	3300005614	Corn Rhizosphere	EFAWTPDARGVGWLFRGTDSANYYGARLRLIQSGATPTLSAEHFSVVKGVEGAHARKVITLGRTPGQVMVRMDANGPAFTLYLQGSPTDYWTDDRFETGSLGFYADRGERPVLQSIRFTFFKKSGLQTVVTSLQ*
Ga0070702_1007400811	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ*
Ga0068852_1023894102	3300005616	Corn Rhizosphere	KNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRAMSEVAVRMDATGPAFTLSLQGNPADYWTDERFESGSLGFYEEGGERPVLQGLRFTLFKKSGLQTVVTSLQ*
Ga0068859_1002789911	3300005617	Switchgrass Rhizosphere	SQGTGNGSAPGAAGTWSRRTAYVMGSSAPREILVFSGSDDLKNYRIDFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ
Ga0068859_1020405892	3300005617	Switchgrass Rhizosphere	PAAAGTWSRRTAYLVGAKDPREILIYSGSEDVKNYRIDFAWVPDTRGVGWLFRGTDSANYYAAKLRLVQAGSTPSLSAEHFAVVKGVEGPHSLKVITVGRTLGQVLVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYGEPGERPVLQTLRFTFFKKSGLQTVVTSLQ*
Ga0068864_1009398471	3300005618	Switchgrass Rhizosphere	VGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ*
Ga0068861_1005666901	3300005719	Switchgrass Rhizosphere	KNYRVEFAWVPDPRGVGLIFRATDSANYYAAKLRLMQAGATPTLSAEHFTVVKGVEGTHSRKVITLGRTQREVLVRMDATGPAFTLFLQGIPADYWTDEQFEAGSLGFYEERGERPALKALRFTLFKKSGLQTVVTSLQ*
Ga0074479_102266571	3300005829	Sediment (Intertidal)	LFRGTDSANYYAARLRLLQAGATPSLSAEHFAVVKGVEGTHSRKVLTLGRTQGEVQVRMDANGPAFTLYLQGTPADYWTDERFETGSLGFYAERGERPVLEALRFTFFRKSGLQTVVTSLQ*
Ga0074470_100770652	3300005836	Sediment (Intertidal)	DSANYYAANLRLIQSGATPSLSAEHFAVVKGVEGTHTRKVITLGRTLGQVMVRMDANGPAFTLYLQGNPADYWTDERFETGSLGFYEERGERPVLQALRFTFFKKSGLQTVVTSLQ*
Ga0068863_1009226661	3300005841	Switchgrass Rhizosphere	GNGSAPGAAGTWSRRTAYVMGSSAPREILVFSGSDDLKNYRIDFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ*
Ga0068858_1001133083	3300005842	Switchgrass Rhizosphere	VGWLFRGTDSANYYAAKLRLLQAGATPSLSAEHFAVVQGVEGTHSRKVLTLGRTKGEVQVRMDAEGPAFTLYLQGSPADYWTDERFEKGSLGFYAERGERPVLEGLRFTFFRKSGLQTVVTSLQ*
Ga0068858_1015304012	3300005842	Switchgrass Rhizosphere	EILIYSGSEDVKNYRIEFSWVPDTRGVGWLFRGTDSANYYAAHLRLVQAGATPSLAAEHFAVVKGVEGTHSRRVLTLGRTKGAVMVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYAERGERPVLEALRFTFFRKSGLQTVVTSLQ*
Ga0075028_1008540701	3300006050	Watersheds	YYAARLRLLQEGATPTLSAEHFAVVKGVEGTHTRKITTLGKTNGEVMVRMDADGPASTLYLQGTPADYWTDERFETGSLGFYGDRGERPVLQAIRFTLFKKGGLQTVVTSLQ*
Ga0097621_1001197561	3300006237	Miscanthus Rhizosphere	AKDPREILVYSGSDDVKNYRIEFAWIPDIRGVGWLFRGTDSANYYAANLRLIQPGATPTLSAEHFTVVDGREGPHSRKVITLGQTPGEVQVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYAERGERPVLQALRFTFFKKSGLQTVVTSLQ*
Ga0068871_1014363772	3300006358	Miscanthus Rhizosphere	RRTAYVMGSSAPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ*
Ga0066665_105203302	3300006796	Soil	LVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ*
Ga0075425_1026935442	3300006854	Populus Rhizosphere	SANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVLQGLRFTLFKKSGLQTVVTSLQ*
Ga0068865_1002643722	3300006881	Miscanthus Rhizosphere	VFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALKDVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPEVQGLRFTLFKKSGLQTVVTSLQ*
Ga0105240_118794792	3300009093	Corn Rhizosphere	KNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ*
Ga0105245_102919283	3300009098	Miscanthus Rhizosphere	EILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ*
Ga0105245_108546761	3300009098	Miscanthus Rhizosphere	VIGAKDPREILVYSGSDDVKNYRIEFAWIPDIRGVGWLFRGTDSANYYAANLRLIQPGATPTLSAEHFTVVDGREGPHARKVITLGQTPGEVQVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYAERGERPVLQALRFTFFKKSGLQTVVTSLQ*
Ga0105245_117463822	3300009098	Miscanthus Rhizosphere	SSAPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALKDVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPEVQGLRFTLFKKSGLQTVVTSLQ*
Ga0105247_102729551	3300009101	Switchgrass Rhizosphere	MGSSAPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVLQGLRFTLFKKSGLQTVVTSLQ*
Ga0105247_114145911	3300009101	Switchgrass Rhizosphere	YLVGGKDPREILVYSGSEDVKNYRIEFAWTPEPRGVGLIFRATDSANYYAAKLRLMQAGAIPTLSAEHFTVIKGVEGTHSRKVLTLGQTKGEVQVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYGERGERPVLQTLRFTFFKKSGLQTVVTSLQ*
Ga0105243_123913691	3300009148	Miscanthus Rhizosphere	MGSSAPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALKDVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSL
Ga0105242_122762992	3300009176	Miscanthus Rhizosphere	EPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALKEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEDGGERPVLQGLRFTLFKKSGLQTVVTSLQ*
Ga0105248_109062631	3300009177	Switchgrass Rhizosphere	GSSAPREILVFSGSDDLKNYRIDFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ*
Ga0105248_114552771	3300009177	Switchgrass Rhizosphere	VGLIFRATDSANYYAAKLRLMQAGATPTLSAEHFTVVKGVEGTHSRKVITLGRTQREVLVRMDATGPAFTLFLQGIPADYWTDEQFEAGSLGFYEERGERPALKALRFTLFKKSGLQTVVTSLQ*
Ga0105237_101784323	3300009545	Corn Rhizosphere	YVMGSSVPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVTGVEGAQSRKVITLSRALKDVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ*
Ga0105238_118553402	3300009551	Corn Rhizosphere	VGWLFRGTDSANYYAAKLRLVQAGSTPSLSAEHFAVVQGVEGPHSRKVITLGRTLGQVLVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYGDRGERPVLQTLRFTFFRKSGLQTVVTSLQ*
Ga0105249_129908211	3300009553	Switchgrass Rhizosphere	RTTYVMGSSAPREILVFSGSDNLKNYRIEFSWVPGPRGVGWIFRATDSANYYAAKLRLIQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEERGERPIVQGLRFTLFKKSGLQTVVTSLQ*
Ga0105239_106715511	3300010375	Corn Rhizosphere	KLRLVQAGSTPSLSAEHFAVVKGVEGPHSRKVITVGRTLGQVLVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYGEPGERPVLQTLRFTFFKKSGLQTVVTSLQ*
Ga0105239_120748532	3300010375	Corn Rhizosphere	REILVYSGSDGLKNYRIEFAWVPDVRGVGWIYRASDSANYYATKLRLIQAGSSPTLSAEHFAVVKGVEGAHSRKVITLSRTKGEVLVRMDANGPSFTLFLQGSPTDYWTDERFDSGSLGFYEDRGERPALQGLRFTLFKKSGLQTVVTSLQ*
Ga0134126_120137492	3300010396	Terrestrial Soil	PDTRGVGWIFRGTDSANYYAANLRLIQAGVAPSLSAEHFAVVKGVEGTHARKVITLGRTLGQVLVRMDANGPAFTLYLQGSPADYWTDGRFETGSLGFYEERNERPALQALRFTFFRKSGLQTVVTSLQ*
Ga0134123_132072271	3300010403	Terrestrial Soil	PREILIYSGSEDVKNYRIEFSWVPDTRGVGWLFRGTDSANYYAAHLRLVQAGATPSLAAEHFAVVKGVEGTHSRRVLTLGRTKGAVLVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYAERGERPVLEALRFTFFRKSGLQTVVTSLQ*
Ga0137377_108810952	3300012211	Vadose Zone Soil	NYYAAKLRLIQAGAIPTLSSEHFAVVKGVEGAHSRKVITLSRALREVTVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEERGERPVLQGLKFTLFKKSGLQTVVTSLQ*
Ga0164302_113186541	3300012961	Soil	GWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPLVQGLRFTLFKKSGLQTVVTSLQ*
Ga0157374_110107592	3300013296	Miscanthus Rhizosphere	VYSGSDNLKNYRIEFSWVPEPRGVGWIFRATDSANYYAARLRLVQAGAIPTLSAEHFAVVKGVEGPHSRKVITLSRALSGVSVRMDATGPAFTLYLQGNPADYWTDERFEAGSLGFYEERGERPVLQGLRFTLFKKSGLQTVTTSLQ*
Ga0157374_124279041	3300013296	Miscanthus Rhizosphere	SQTTAGSGSTPGAAGTWSRRTAYVMGSSVPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ*
Ga0163162_120194641	3300013306	Switchgrass Rhizosphere	VMGSSAPREILVFSGSDNLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLIQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEERGERPIVQGLRFTLFKKSGLQTVVTSLQ*
Ga0163162_123674091	3300013306	Switchgrass Rhizosphere	KNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVQGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ*
Ga0157375_101939483	3300013308	Miscanthus Rhizosphere	REILIYSGAEDVKNYRIEFSWVPDTRGVGWLFRGTDSANYYAAKLRLLQAGATPSLSAEHFAVVKGVEGTHSRKVLTLGQTKGEVQVRMDANGPAFTLYLQGTPADYWTDERFETGSLGFYSERGERPVLEGLHFTFFRKSGLQTVVTSLQ*
Ga0157375_103948421	3300013308	Miscanthus Rhizosphere	MGSSAPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ*
Ga0163163_100993201	3300014325	Switchgrass Rhizosphere	MGSSAPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALKDVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPEVQGLRFTLFKKSGLQTVVTSLQ*
Ga0163163_129719891	3300014325	Switchgrass Rhizosphere	MGSSAPREILVFSGSDDLKNYRIDFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHDVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVT
Ga0157379_125933291	3300014968	Switchgrass Rhizosphere	MGSSAPREILVFSGSDDLKNYRIDFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQG
Ga0187779_105973182	3300017959	Tropical Peatland	VGWLFRGTDSANYYAANLRLLQAAPNPSISAEHFTVVKGVEGTHSRKVITLGGTLGQVQVRMDANGPAFTLYVQGNPADYWTDSRFETGSLGFYAERGERPVLQALRFTFFRKSGLQTVVTSLQ
Ga0187776_108808711	3300017966	Tropical Peatland	LKNYRIEFAWVPDVRGVSWIFRATDSANYYAAKLRLMQAGAIPTLSAEHFAVVKGVEGTHSRKVITLSRTQRDVLVRMDATGPAFTLYLQGNPADYWTDERFESGSLGFYEERGERPVVQALRFTLFKKSGLQTVVTSLE
Ga0210407_106803721	3300020579	Soil	VMGSNDPREILVYSGTDGLKNYRIEFAWVPDPRGVGLIFRATDSANYFAAKLRLLQAGAIPTLTAEHFAVVKGVEGAHSRKVITLSRTNSEVLVRLEATGPAFTLYLQGSPAEYWTDERFESGSLGFYEERGERPRLQALRFTLFKKSGLQTVVTSLQ
Ga0207692_107186682	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RLRLIQSGATPTLSAEHFSVVKGVEGAHARKVITLGRTPGQVLVRMDANGPAFTLYLQGSPTDYWTDDRFETGSLGFYADRGERPVLQSIRFTFFKKSGLQTVVTSLQ
Ga0207710_100680222	3300025900	Switchgrass Rhizosphere	LVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVLQGLRFTLFKKSGLQTVVTSLQ
Ga0207699_110022421	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VPEPRGVGWIFRATDSANYYAARLRLVQAGAIPTLSAEHFAVVKGVEGPHSRKVITLSRALSGVSVRMDATGPAFTLYLQGNPADYWTDERFEAGSLGFYEERGERPVLQGLRFTLFKKSGLQTVTTSLQ
Ga0207654_109630771	3300025911	Corn Rhizosphere	SGSQDVKNYRIEFGWVPDTRGVGWIFRATDSANYYAARIRLMQAGATPSLSAEHFTVVKGVEGTHTRKTITLGRTSGAVLVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYGDRGERPILQTLRFTFFRKSGLQTVVTSLQ
Ga0207695_113234481	3300025913	Corn Rhizosphere	KNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ
Ga0207663_110157771	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VVGGKEPREILVYSGFEDVKNYRIEFSWVPDTRGVGWLFRGTDSANYYAAKLRLLQAGATSSLSAEHFSVVKGVEGTHTRKVITLGRTSSAVQVRMDANGPAFTLYVQGNPADYWTDERFETGSLGFYAERGERPVLQALRFTFFKKSGLQTIVTSL
Ga0207663_112955391	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LVQAGSTPSLSAEHFAVVKGVEGPHARKVITLGRTLGQVLVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYGERGERPVLQTLRFTFFKKSGLQTVVTSLQ
Ga0207652_112646771	3300025921	Corn Rhizosphere	EPANTSPGTWSRRTAYVTGSSAPREILVYSGSDNLKNYRIEFSWVPEPRGVGWIFRATDSANYYAARLRLVQAGAIPTLSAEHFAVVKGVEGPHSRKVITLSRALSGVSVRMDATGPAFTLYLQGNPADYWTDERFEAGSLGFYEERGERPVLQGLRFTLFKKSGLQTVTTSLQ
Ga0207694_100859843	3300025924	Corn Rhizosphere	APREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRAMSEVAVRMDATGPAFTLSLQGNPADYWTDERFESGSLGFYEEGGERPVLQGLRFTLFKKSGLQTVVTSLQ
Ga0207687_108135061	3300025927	Miscanthus Rhizosphere	WSRRTAYVMGSSAPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALKDVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPEVQGLRFTLFKKSGLQTVVTSLQ
Ga0207687_111602782	3300025927	Miscanthus Rhizosphere	AAAGSWSRRSAYLVGAKEPREILIYSGSEDVKNYRIEFGWVPDPRGVGWLFRGTDSANYYGANLRLLQPGATPMLSAEHFAVVKGVEGPHSRKVITLGRTPSQVQVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYAERGERPVLQALRFTFFRKSGLQTVVTSLQ
Ga0207687_112735172	3300025927	Miscanthus Rhizosphere	GLIFRATDSANYYAAKLRLMQAGAIRTLSAEHFTVVKGVEGTHSRKVITLGRTQREVLVRMEATGPAFTLFLQGIPADYWTDEQFEAGSLGFYEERGERPALQALRFTLFKKSGLQTVVTSLQ
Ga0207686_112800341	3300025934	Miscanthus Rhizosphere	NYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALKEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEDGGERPVLQGLRFTLFKKSGLQTVVTSLQ
Ga0207709_113593271	3300025935	Miscanthus Rhizosphere	RGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ
Ga0207711_105324771	3300025941	Switchgrass Rhizosphere	ATDSANYYAAKLRLMQAGATPTLSAEHFTVVKGVEGTHSRKVITLGRTQREVLVRMDATGPAFTLFLQGIPADYWTDEQFEAGSLGFYEERGERPALKALRFTLFKKSGLQTVVTSLQ
Ga0207711_110596972	3300025941	Switchgrass Rhizosphere	YYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ
Ga0207689_111900332	3300025942	Miscanthus Rhizosphere	SANYYAAKLRLLQAGATPSLSAEHFAVVQGVEGTHSRKVLTLGRTKGEVQVRMDAEGPAFTLYLQGSPADYWTDERFEKGSLGFYAERGERPVLEGLRFTFFRKSGLQTVVTSLQ
Ga0207667_104127892	3300025949	Corn Rhizosphere	PREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRAMSEVAVRMDATGPAFTLSLQGNPADYWTDERFESGSLGFYEEGGERPVLQGLRFTLFKKSGLQTVVTSLQ
Ga0207712_119439071	3300025961	Switchgrass Rhizosphere	SSAPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALKDVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPEVQGLRFTLFKKSGLQTVVTSLQ
Ga0207640_100796141	3300025981	Corn Rhizosphere	MGSSVPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGER
Ga0207703_108378612	3300026035	Switchgrass Rhizosphere	SGAEDVKNYRIEFSWVPDTRGVGWLFRGTDSANYYAAKLRLLQAGATPSLSAEHFAVVQGVEGTHSRKVLTLGRTKGEVQVRMDAEGPAFTLYLQGSPADYWTDERFEKGSLGFYAERGERPVLEGLRFTFFRKSGLQTVVTSLQ
Ga0207702_115826632	3300026078	Corn Rhizosphere	EFAWTPDARGVGWLFRGTDSANYYGARLRLIQSGATPTLSAEHFSVVKGVEGAHARKVITLGRTPGQVMVRMDANGPAFTLYLQGSPTDYWTDDRFETGSLGFYADRGERPVLQSIRFTFFKKSGLQTVVTSLQ
Ga0207641_115226292	3300026088	Switchgrass Rhizosphere	HPGSQGTGNGSAPGAAGTWSRRTAYVMGSSAPREILVFSGSDDLKNYRIDFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ
Ga0207676_108433551	3300026095	Switchgrass Rhizosphere	DSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGQRPVLQGLRFTLFKKSGLQTVVTSLQ
Ga0207674_101857011	3300026116	Corn Rhizosphere	KNYRIDFAWVPDTRGVGWLFRGTDSANYYAAKLRLVQAGSTPSLSAEHFAVVKGVEGPHSRKVITVGRTLGQVLVRMDANGPAFTLYLQGSPADYWTDERFETGSLGFYGEPGERPVLQTLRFTFFKKSGLQTVVTSLQ
Ga0207675_1005503561	3300026118	Switchgrass Rhizosphere	KNYRVEFAWVPDPRGVGLIFRATDSANYYAAKLRLMQAGATPTLSAEHFTVVKGAVETHSRKVITLGRTQREVLVRMDATGPAFTLFLQGIPADYWTDEQFEAGSLGFYEERGERPALKALRFTLFKKSGLQTVVTSLQ
Ga0207675_1019765011	3300026118	Switchgrass Rhizosphere	TDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALHEVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ
Ga0207683_101075453	3300026121	Miscanthus Rhizosphere	MGSSVPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVTSLQ
Ga0207698_103496871	3300026142	Corn Rhizosphere	MGSSAPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRAMSEVAVRMDATGPAFTLSLQGNPADYWTDERFESGSLGFYEEGGERPVLQGLRFTLFKKSGLQTVVTSLQ
Ga0209526_107419761	3300028047	Forest Soil	WVPDSLGVGCIFRASDSANYYAAKLRLLQAGATPTLSAEHFAVVKGVESPHSRKVITLGRTDNMVLVRMDANGPAFTVSLQGSPADYWTDERFEAGSLGFYADSGERPVLQSIRFTLFKKNGLQTVVTSLQ
Ga0268266_104963782	3300028379	Switchgrass Rhizosphere	AGTWSRRTAYVMGSSVPREILVFSGSDDLKNYRIEFSWVPEPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALREVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLHFTLFKKSGLQTVVASLQ
Ga0308309_116425651	3300028906	Soil	TWSRRTAYLVGSKDPREILVYSGSQDVKNYRLEFTWVPDSLGVGWIFRASDSANYYAARLRLLQAGATPTLSAEHFAVVKGVESAHSRKVITLGRTDNQVSVRMDANGPAFTLSLQGTPADYWTDERFEAGSLGFYADSGERPVLQAIRFTLFKKNGLQTVVTSLQ
Ga0311349_121309861	3300030294	Fen	MAYVVGGKQPREILIYSGSEDVKNYRIEFSWVPDTQGVGWIFRGTDSANYYAANLRLIQPGARPSLSAEHFTVVKGVEGTHSRRVITLDRAQGQVQVRMDANGPAFTLYLQGNPADYWTDERFETGSLGFYAERGERPVL
Ga0265330_101886442	3300031235	Rhizosphere	NYRIEFAWVPDTRGVGWLFRGTDSANYYAANLRLIQAGATPSLSAEHFAVVNGVEGTHSRKVITLGRTLSQVQVRMDANGPAFTLYLQGNPADYWTDPRFETGSLGFYAERGERPVLQALRFTFFRKSGLQTVVTSLQ
Ga0307506_101027592	3300031366	Soil	EPRGVGWIFRATDSANYYAAKLRLVQAGAIPTLSAEHFAVIKGVEGAHSRKVITLSRTVSDVSVRMDATGPAFTLYLQNSPADYWTDERFESGSLGFYEDRGERPLLQSLRFTLFKKSGLQTVVTSLQ
Ga0307469_120878711	3300031720	Hardwood Forest Soil	AKLRLVQAGAIPTLSAEHFAVVKGVEGAHSRKVITLSRALRDVAVRMDATGPAFTLFLQGNPSDYWTDERFESGSLGFYEEGGERPVVQGLRFTLFKKSGLQTVVTSLQ
Ga0308175_1019894982	3300031938	Soil	IEFAWIPDTRGVGWLFRGTDSANYYAAKLRLIQSGATPTLSAEHFSVVKGVEGPHSRKVLTLGRTLGQVLVRMDANGPAFTLYVQGSPADYWTDERFESGSLGFYSERGERPNLQSLRFTFFKKSGLQTVVTSLQ
Ga0310810_106235491	3300033412	Soil	RGVGWIFRASDSANYYAAKLRLMQGGATPTLSAEHFTVVKGVEGTHSRKVITLGPTKREVLVRMDANGPSFTLNLQGSPADYWTDERFESGSLGFYEERGERPTLQALRFTLFKKSGLQTVVTSLQ
Ga0316628_1021967361	3300033513	Soil	VGWLFRGTDSANYYAAKLRLIQSGATPTLSAEHFSVVKGVEGPHARKVITLGRTPGQVLVRMDANGPAFTLYLQGSPTDYWTDDRFETGSLGFYADRGERPVLQSLRFTFFKKSGLQTVVTSLQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087370

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences