NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087284

Metagenome / Metatranscriptome Family F087284

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087284
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 110 residues
Representative Sequence MQALQLITDVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTMRRLLEG
Number of Associated Samples 95
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 35.45 %
% of genes near scaffold ends (potentially truncated) 48.18 %
% of genes from short scaffolds (< 2000 bps) 89.09 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (66.364 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds
(12.727 % of family members)
Environment Ontology (ENVO) Unclassified
(26.364 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(36.364 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 65.67%    β-sheet: 0.00%    Coil/Unstructured: 34.33%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF02515CoA_transf_3 38.18
PF13828DUF4190 30.91
PF02572CobA_CobO_BtuR 4.55
PF01120Alpha_L_fucos 0.91
PF11349DUF3151 0.91
PF00498FHA 0.91
PF11225DUF3024 0.91
PF01636APH 0.91
PF00156Pribosyltran 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 38.18
COG2109ATP:corrinoid adenosyltransferaseCoenzyme transport and metabolism [H] 4.55
COG3669Alpha-L-fucosidaseCarbohydrate transport and metabolism [G] 0.91

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms66.36 %
UnclassifiedrootN/A33.64 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105347954All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300000955|JGI1027J12803_102586932All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300004081|Ga0063454_101228734All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300004114|Ga0062593_100023778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3318Open in IMG/M
3300004114|Ga0062593_100074878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2260Open in IMG/M
3300004114|Ga0062593_100967587Not Available869Open in IMG/M
3300004156|Ga0062589_100692216All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium903Open in IMG/M
3300004157|Ga0062590_101371725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium701Open in IMG/M
3300004463|Ga0063356_102541353Not Available785Open in IMG/M
3300004463|Ga0063356_105411757All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300004479|Ga0062595_102161849All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300005093|Ga0062594_100974661All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300005330|Ga0070690_100284972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1180Open in IMG/M
3300005441|Ga0070700_100626785Not Available846Open in IMG/M
3300005441|Ga0070700_101407889All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300005458|Ga0070681_10255088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1666Open in IMG/M
3300005518|Ga0070699_102195490Not Available504Open in IMG/M
3300005526|Ga0073909_10302062All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300005535|Ga0070684_102357335All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300005544|Ga0070686_100487682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales954Open in IMG/M
3300005615|Ga0070702_100610291Not Available819Open in IMG/M
3300005617|Ga0068859_101172240All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300005719|Ga0068861_101463096Not Available669Open in IMG/M
3300005842|Ga0068858_101828438All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300005844|Ga0068862_100972837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales838Open in IMG/M
3300006047|Ga0075024_100110942All Organisms → cellular organisms → Bacteria1213Open in IMG/M
3300006050|Ga0075028_100646644All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300006057|Ga0075026_100012453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3693Open in IMG/M
3300006057|Ga0075026_100322418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales849Open in IMG/M
3300006059|Ga0075017_100014743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5009Open in IMG/M
3300006059|Ga0075017_101606475Not Available513Open in IMG/M
3300006102|Ga0075015_100155650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1192Open in IMG/M
3300006102|Ga0075015_100968216Not Available519Open in IMG/M
3300006354|Ga0075021_10378749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales885Open in IMG/M
3300006358|Ga0068871_101749742All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300009094|Ga0111539_11707690All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300009098|Ga0105245_10681730All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300009100|Ga0075418_12368881All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300009156|Ga0111538_10152025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2941Open in IMG/M
3300009176|Ga0105242_10612893Not Available1053Open in IMG/M
3300009553|Ga0105249_11487506Not Available749Open in IMG/M
3300009553|Ga0105249_12823987Not Available557Open in IMG/M
3300009660|Ga0105854_1265247Not Available589Open in IMG/M
3300009683|Ga0116224_10243528All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300009698|Ga0116216_10543806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium701Open in IMG/M
3300009700|Ga0116217_10771455Not Available593Open in IMG/M
3300009824|Ga0116219_10105921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1639Open in IMG/M
3300010379|Ga0136449_100019353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia17530Open in IMG/M
3300010403|Ga0134123_10882586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium898Open in IMG/M
3300010880|Ga0126350_11109764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1391Open in IMG/M
3300011400|Ga0137312_1014206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1052Open in IMG/M
3300012363|Ga0137390_11664222All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300012957|Ga0164303_10947440All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300012958|Ga0164299_11563281Not Available517Open in IMG/M
3300012961|Ga0164302_11629547Not Available538Open in IMG/M
3300012984|Ga0164309_10401399All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300012986|Ga0164304_11105778Not Available634Open in IMG/M
3300013306|Ga0163162_12545382Not Available589Open in IMG/M
3300013308|Ga0157375_12103362Not Available672Open in IMG/M
3300014325|Ga0163163_11131389Not Available846Open in IMG/M
3300014968|Ga0157379_10600648All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1027Open in IMG/M
3300014968|Ga0157379_11665634Not Available624Open in IMG/M
3300014969|Ga0157376_10776660All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300015077|Ga0173483_10973921All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300017959|Ga0187779_10110602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1664Open in IMG/M
3300017973|Ga0187780_10093293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2072Open in IMG/M
3300017974|Ga0187777_11416158Not Available513Open in IMG/M
3300018032|Ga0187788_10160732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium851Open in IMG/M
3300018060|Ga0187765_10633630All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300018089|Ga0187774_10721881All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300019356|Ga0173481_10162527All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300019887|Ga0193729_1242779Not Available578Open in IMG/M
3300021432|Ga0210384_10138887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2181Open in IMG/M
3300025908|Ga0207643_11112492Not Available509Open in IMG/M
3300025912|Ga0207707_10257067All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1516Open in IMG/M
3300025927|Ga0207687_10751153All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300025961|Ga0207712_10985287Not Available747Open in IMG/M
3300026075|Ga0207708_11280460Not Available642Open in IMG/M
3300026075|Ga0207708_11648984All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300027894|Ga0209068_10275395Not Available940Open in IMG/M
3300027894|Ga0209068_10447329Not Available741Open in IMG/M
3300027898|Ga0209067_10679376All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_54_10595Open in IMG/M
3300027905|Ga0209415_10891124Not Available606Open in IMG/M
3300027915|Ga0209069_10274652All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300027915|Ga0209069_10291183All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria863Open in IMG/M
3300028380|Ga0268265_11214355Not Available752Open in IMG/M
3300028380|Ga0268265_11215498Not Available752Open in IMG/M
3300028573|Ga0265334_10061499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1415Open in IMG/M
3300028654|Ga0265322_10172860All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300028800|Ga0265338_10000501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria69868Open in IMG/M
3300028889|Ga0247827_10676740All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300029923|Ga0311347_10194527All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1248Open in IMG/M
3300030000|Ga0311337_11054761Not Available709Open in IMG/M
3300031232|Ga0302323_102058011All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300031247|Ga0265340_10275482Not Available748Open in IMG/M
3300031251|Ga0265327_10536850Not Available503Open in IMG/M
3300031344|Ga0265316_10287976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1199Open in IMG/M
3300031595|Ga0265313_10138017Not Available1051Open in IMG/M
3300031711|Ga0265314_10025610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4446Open in IMG/M
3300031716|Ga0310813_11568035All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300031908|Ga0310900_10569674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria891Open in IMG/M
3300032160|Ga0311301_10021310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria18162Open in IMG/M
3300032160|Ga0311301_10091548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6069Open in IMG/M
3300032211|Ga0310896_10403756All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300032256|Ga0315271_11964064All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300032893|Ga0335069_10549126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1333Open in IMG/M
3300033412|Ga0310810_10915397Not Available767Open in IMG/M
3300033412|Ga0310810_11269880Not Available585Open in IMG/M
3300034281|Ga0370481_0094877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium995Open in IMG/M
3300034965|Ga0370497_0116752Not Available647Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds12.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.00%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil7.27%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere7.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.36%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.45%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.73%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.73%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.82%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.82%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.82%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.82%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.91%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.91%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.91%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.91%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.91%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.91%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009660Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011400Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2EnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028573Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaGHost-AssociatedOpen in IMG/M
3300028654Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaGHost-AssociatedOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300029923II_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031247Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaGHost-AssociatedOpen in IMG/M
3300031251Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaGHost-AssociatedOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031595Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaGHost-AssociatedOpen in IMG/M
3300031711Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaGHost-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034281Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15EnvironmentalOpen in IMG/M
3300034965Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10534795413300000364SoilRRQRLQRLIRPASGRPGGLPASGIGRFGSIFTVSFARLPEMVPMQALQITEVRVNDARVEIDQLMTELHDLVARGETSGRTAVDEALLTAAKLQAVTANVDACNPSRXPGIDSELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
JGI1027J12803_10258693223300000955SoilQRLIRPASGRPGGLPASGIGRFGSIFTVSFARLPEMVPMQALQITEVRVNDARVEIDQLMTELHDLVARGETSGRTAVDEALLTAAKLQAVTANVDACNPSRMPGIDSELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0063454_10122873413300004081SoilANDARAEIDRLMRELHALVGQSVRSGRVAVRAALPAAAKLQVVTANVDACNPSRRPGLAAELVALADQQVRSRRDSIERSLAYTAESTMRRLTGDV*
Ga0062593_10002377823300004114SoilMQTLQPASHVRVNDARFEIDQLMSELHDLVSCAEMSGRSAVDEALPTAAKLQVVTTNVDACNPSRRPGIARELVALADLRMRSMRDALERSLVYTAESTMRRLLGEG*
Ga0062593_10007487843300004114SoilMAPMQTLQLPPYIRDNAARIEIDQLMAELHELVSRGEVSGRSAIDDALPTAARLQVVTANVDACNPSRRPAIARALVALADMRMRSMRDPLERSLFYTAESTMRRLLGEA*
Ga0062593_10096758723300004114SoilVIRLAPCHEMVPMQALQFTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0062589_10069221613300004156SoilARFEIDQLMSELHDLVSCAEMSGRSAVDEALPTAAKLQVVTTNVDACNPSRRPGIARELVALADLRMRSMRDALERSLVYTAESTMRRLLGEG*
Ga0062590_10137172523300004157SoilFEIDQLMSELHDLVSCAEMSGRSAVDEALPTAAKLQVVTTNVDACNPSRRPGIARELVALADLRMRSMRDALERSLVYTAESTMRRLLGEG*
Ga0063356_10254135323300004463Arabidopsis Thaliana RhizosphereMQTLQPASHVRVNDARFEIDQLMSELHDLVSCAEMSGRSAVDEALPTAAKLQVVTTNVDACNPSRRPGIDRELVALADLRMRSMRDAIERSLVYTAESTMRRLLGEA*
Ga0063356_10541175723300004463Arabidopsis Thaliana RhizosphereIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0062595_10216184923300004479SoilPVHEMVPMQALQLITDIRVNDARIEIDQLMSELHELVSRGESSGRNAIDEALPTAAKLQVVTANVDACNPSRRPGIDRDLVALADVRMRSMRDAIERSLFYTAESTMRRLLEA*
Ga0062594_10097466123300005093SoilVIRLAPCHEMVPMQALQSTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0070690_10028497223300005330Switchgrass RhizosphereVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0070700_10062678523300005441Corn, Switchgrass And Miscanthus RhizosphereMQALQLITDVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0070700_10140788923300005441Corn, Switchgrass And Miscanthus RhizosphereRSIFVIRLAPCHEMVPMQALQSTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0070681_1025508823300005458Corn RhizosphereMVPMQTLQLPPYIRDNAARMEIDQLMAELHELVSRGEVSGRSAIDDALPTAARLQVVTANVDACNPSRQPGLARALVALADIRMRSMRDPLERSLFYTAESTMRRLLGEA*
Ga0070699_10219549013300005518Corn, Switchgrass And Miscanthus RhizosphereGFTCLSEVVPMQALQLPDLTDLRVNDARVEIDQLMAELHDLVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRVPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRILEA*
Ga0073909_1030206213300005526Surface SoilGPRPLKGSVPSGFGPTRSISLVRFRLCGEMVPMQALQLIADVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0070684_10235733513300005535Corn RhizosphereDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0070686_10048768223300005544Switchgrass RhizosphereMQALQLIADVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0070702_10061029123300005615Corn, Switchgrass And Miscanthus RhizosphereMQALQLITDVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0068859_10117224013300005617Switchgrass RhizosphereAPTPDRACLAARTRPGGLRNWADPVDIPGQVSPVHEMVPMQALQLLADLRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0068861_10146309623300005719Switchgrass RhizosphereVIRLAPCHEMVPMQALQSTDVRVNDARFEIDQLMAELHELVSRGETSGRIAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTA
Ga0068858_10182843813300005842Switchgrass RhizosphereRLGGLRNWACPVDIHGQVPPVHGMVPMQALQLIADVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0068862_10097283723300005844Switchgrass RhizosphereVIRLAPCHEMVPMQALQFTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELMALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0075024_10011094223300006047WatershedsMQTLEPTDVRAHDARVEIDRLMSELHGLVSRGAHSACAAIDEALPAVAKLQVVTANVDACNPSRRPGVGAELVAMADARMRIRRDATERSLTYTAEATMRRLTGE*
Ga0075028_10064664423300006050WatershedsRAEIDRLMSELHGLVSRSESSACAAIDEALPTAAKLQVVTANVDACNPSRRPGLGAELVAMADRRMRIRRDATERSLTYTAEATLRRLLGE*
Ga0075026_10001245363300006057WatershedsMQTIPGARDADVDVDAAPATRANEQRAHAARAEIDRLMGELHALVARDDPSGRDAVRAALPAAAKLQVVTANVDACNPSRRPGLAAELVALADRQVKSRRDAIERSLAYTAESTMRRLTGER*
Ga0075026_10032241823300006057WatershedsMQTLEPTDVRAHDARVEIDRLMSELHGLVSRGAHSACAAIDEALPAAAKLQVVTANVDACNPSRRPGVGAELVAMADARMRIRRDATERSLTYTAEATMRRLTGE*
Ga0075017_10001474323300006059WatershedsMQTFQTIQTDQSASETRAHDARAEIDRLMAELHRLVSRGESSGRAAVEEALPTAAKLQVVTANVDACNPSRRPGIAAELVGLADVHARRRRDAIERGLVYTADSTMRRLLGEQTKPKEIRKLGW*
Ga0075017_10160647513300006059WatershedsMQTLEPNDIRAHDARAEIERLMSELHGLVSRSVSSACAAIEEALPAAATLQVVTANVDACNPSRRPGVGAELVALADQRMRIRRDATERSLTYTAEATMRRLCGE*
Ga0075015_10015565023300006102WatershedsMQIAPTASQILTQRGVRAHDARVEINQLMAELHDLVSRAESSGRNAVEEALPTAARLQVVTSNVDACNPSRRPGIAGELVAIADHRVRSRRDAIERSLVYTADTTMRRLLGDA*
Ga0075015_10096821623300006102WatershedsMQTQEEHVANPVRAHDARAEIERLMAELHHLVSRSMGSGRDTVEGALPTAAKLQVATANVDACNPSRRPGIATDLLAMADQRARTRRDATERILVYTSDATMRRLTTSEPA*
Ga0075021_1037874923300006354WatershedsMQTLQPNHVRAHDARAEIDRLMSELHGLVSRSESSACAAIDEALPTAAKLQVVTANVDACNPSRRPGLGAELVAMADRRMRIRRDATERSLTYTAEATLRRLLGE*
Ga0068871_10174974213300006358Miscanthus RhizosphereMQALQLITDIRVNDARIEIDQLMSELHELVSRGESSGRNAIDEALPTAAKLQVVTANVDACNPSRRPGIDRDLVALADVRMRSMRDAIERSLFYTAESTMRRLLEA*
Ga0111539_1170769013300009094Populus RhizosphereFGLLGSIFVIRLAPCHEMVPMQALQFTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0105245_1068173023300009098Miscanthus RhizosphereMVPMQALQLIADIRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0075418_1236888113300009100Populus RhizosphereRFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0111538_1015202523300009156Populus RhizosphereMVPMQALQFTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0105242_1061289313300009176Miscanthus RhizosphereMVPMQALQLIADVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0105249_1148750613300009553Switchgrass RhizosphereMVPMQALQSTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0105249_1282398713300009553Switchgrass RhizosphereMVPMQALQLIADVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMR
Ga0105854_126524723300009660Permafrost SoilMVPMQILQLTPGVRVNDARIEIDQLMEELHELVSRGEVSGRSAIDGALPTAAKLQAVTANVDACNPSRRSGVAAEMVALADLRVRSRSDAIERSLVYTADNTMRRL
Ga0116224_1024352813300009683Peatlands SoilMHTLQTPREVRAHDARSEIDRLMAELHRLVSRGGNSGRDAVQEALPTAAKLQVVTANVDACNPSRHADIAAELAAFADVAVRSRRDAVERSLVYTADSTMRRLLGEPAHEI*
Ga0116216_1054380613300009698Peatlands SoilREVRAHDARSEIDRLMAELHRLVSRGGNSGRDAVQEALPTAAKLQVVTANVDACNPSRHADIAAELAAFADVAVRSRRDAVERSLVYTADSTMRRLLGESARVI*
Ga0116217_1077145513300009700Peatlands SoilMQTLQNPCDVRAHDARAEIDRLMAELHRLVSRRGSSGHDAVQEALPTAAKLQVVTANVDACNPSRRAGIAAELAAFADVEVRLRRDAVERSLVYTADSTMRRLLGEPAHEI*
Ga0116219_1010592113300009824Peatlands SoilNPCDVRAHDARAEIDRLMAELHRLVSRRGSSGHDAVQEALPTAAKLQVVTANVDACNPSRRAGIAAELAAFADVEVRLRRDAVERSLVYTADSTMRRLLGEPAHEI*
Ga0136449_100019353113300010379Peatlands SoilMQTLQTQREVRAHDARSEIDRLMAELHRLVSRGGSSGRDAVQEALPTAAKLQVVTANVDACNPSRHADIAAELAAFADVAVRSRRDAVERSLVYTADSTMRRLLGESARVI*
Ga0134123_1088258623300010403Terrestrial SoilLELITDLRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0126350_1110976423300010880Boreal Forest SoilMQTEVQPDTVAGAVRSHDARAEIERLMAELHHLVSRDAGSGRDAVEEALTAAAELQVVTANVDACNPSRRPGLATELVAMADQRARTRRDATERILVYTSDSTMRRLTSSEPK*
Ga0137312_101420623300011400SoilMAPMQTLQPTTALRVNDARIEIDQLMAELHDLVAGGDMSGRVAVDEALLTAAKLQAVTANVDACNPSRQPGIDRELVNLADLRLRTMRDALERSLFYTAESTMRRLLGQA*
Ga0137390_1166422213300012363Vadose Zone SoilHEMVPMQALQLTPGLRVNDARVEIDQLMSELHDLVSRGETSGRIAVDEALLTAARLQAVTANVDACNPSRQPGIARDLVVLADLRMRSMRDAIERSLFYTAESTMRRLLEA*
Ga0164303_1094744013300012957SoilIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0164299_1156328123300012958SoilMVPMQALQITDVRVNDARVEIDQLMTELHDLVARGETSGRTAVDEALLTAAKLQAVTANVDACNPSRMPGIDSELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0164302_1162954713300012961SoilMPMQILQPPEVRINDAQFEIDQLMTELHELVSRSEVSGRNAIDGARLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDAIERSLFYTAESTMRRLLDQA*
Ga0164309_1040139923300012984SoilMVPMQALQLLTDVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0164304_1110577823300012986SoilMQTLQPVNDVRVHDARVEIDQLMSQLHGLVSRGEASGRDAVGEALLTATKLQAVTANVDACNPSRRPGIAREMVALADLRMRSMRDAIERSLAYTAESTMRRLLGEF*
Ga0163162_1254538213300013306Switchgrass RhizosphereMVPMQALQLIADVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0157375_1210336213300013308Miscanthus RhizosphereMVPMQALQLLADLRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTM
Ga0163163_1113138913300014325Switchgrass RhizosphereMIWASEVDIRDQARPLSRMVPMQALQFTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA*
Ga0157379_1060064823300014968Switchgrass RhizosphereMVPMQALQLLADLRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0157379_1166563413300014968Switchgrass RhizosphereMVPMQALQLITDIRVNDARIEIDQLMSELHELVSRGESSGRNAIDEALPTAAKLQVVTANVDACNPSRRPGIDRDLVALADVRMRSMRDAIERSLFYTAESTMRRLLEA*
Ga0157376_1077666013300014969Miscanthus RhizospherePGGLRNWADPVDIPGQVSPVHEMVPMQALQLLADLRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTMRRLLEG*
Ga0173483_1097392113300015077SoilEVRVNDARVEIDQLMTELHDLVARGETSGRTAVDEALLTAAKLQAVTANVDACNPSRMPGIDSELVALADLRMRSMRDALERSLFYTAESTMRRLLEV*
Ga0187779_1011060213300017959Tropical PeatlandMQTLQPASEPRVHDARNEIDQLMAELHRLVSRAQATGRDAVDRALPAAARLQVVTANVDACNPTRRPAAGGEMVALADRHMRLRRDVTERSLYYTADCTMRRLLGEPGG
Ga0187780_1009329313300017973Tropical PeatlandMQTLQPASEPRVHDARNEIDQLMAELHRLVSRAQATGRDAVDRALPTAARLQVVTANVDACNPTRRPAAGGEMVALADRHMRLRRDVTERSLFYTADCTMRRLLGEPGR
Ga0187777_1141615813300017974Tropical PeatlandMQTFQTIQTPQTASETRAHDARAEIDRLMAELHRLVSRGESSGRAAIEEALPTAAKLQVVTANVDACNPSRRPGIAAELVGLADVHARRRRDAIERGLV
Ga0187788_1016073213300018032Tropical PeatlandQTLQPVSESRAHHARTEIDQLMFELHALVSQGERRGRTAIAAALPTAAKLQVVTANVDACNPSRRTGIGTELVALADARVRTMRDATERALGYTAEATMRRLQDD
Ga0187765_1063363023300018060Tropical PeatlandMQTLEPASEPRVHDARNEIDQLMAELHRLVSRAQATGRDAVERALPTAARLQVVTANVDACNPTRRPAAGREMVALADRHMRLRRDVTERSLYYTADCTMRRLLGEPGE
Ga0187774_1072188113300018089Tropical PeatlandARAEIERLMAELHRLVSRGAGTGRAAVEEALPTAAALQVVTANVDACNPSRRPGAAAELVAIADQEARTRHDAIERILAYTSDSTMRRLTPSADPQGPAVSSSRTGDGAP
Ga0173481_1016252723300019356SoilRLAPCHEMVPMQALQFTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA
Ga0193729_124277913300019887SoilMQTLQPVNDVRVHDARVEIYQLMSELHGLVSRGEVSGRDAVDGALLTAAKLQAVTANVDACNPSRRPGIARELVALADLRMRSMRDAIERSLAYTAEST
Ga0210384_1013888743300021432SoilMHTLQSPPEVRAHDARAEIDRLMAELHRLVSRGGSSGRDAVHEALPTAAKLQVVTANVDACNPSRRAGIAAELAAFADVEVRSRRDAVERSLVYTADSTMRRLLGESARLT
Ga0207643_1111249213300025908Miscanthus RhizosphereRRRADVPTRLGGLRNWACPVDIPGQVPPVHGMVPMQALPLIADVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMRRLLEG
Ga0207707_1025706723300025912Corn RhizosphereMVPMQTLQLPPYIRDNAARMEIDQLMAELHELVSRGEVSGRSAIDDALPTAARLQVVTANVDACNPSRQPGLARALVALADIRMRSMRDPLERSLFYTAESTMRRLLGEA
Ga0207687_1075115323300025927Miscanthus RhizosphereMQALQLIADVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMRRLLEG
Ga0207712_1098528723300025961Switchgrass RhizosphereMVPMQALQLIADVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADVRMRSMRDSLERSLFYTAESTMRRLLEG
Ga0207708_1128046013300026075Corn, Switchgrass And Miscanthus RhizosphereMVPMQLLQLTPDVRVNDARIEIDQLMEELHGLVSRGEATGRIAIDDALQKAARLQAVTANVDACNPSRRPGIQSELVALADIRMRSMRDALERSLFYTAESTMRRLLEP
Ga0207708_1164898423300026075Corn, Switchgrass And Miscanthus RhizosphereRSIFVIRLAPCHEMVPMQALQSTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLE
Ga0209068_1027539523300027894WatershedsMQTLQPNHVRAHDARAEIDRLMSELHGLVSRSESSACAAIDEALPTAAKLQVVTANVDACNPSRRPGLGAELVAMADRRMRIRRDATERSLTYTAEATLRRLLGE
Ga0209068_1044732913300027894WatershedsMQIAPTASQILTQRGVRAHDARVEINQLMAELHDLVSRAESSGRNAVEEALPTAARLQVVTSNVDACNPSRRPGIAGELVAIADHRVRSRRDAIERSLVYTADTTMRRLLGDA
Ga0209067_1067937613300027898WatershedsMQTLQTPDDVRAHDARAEIDRLMAELHRLVSRGGSSGRDAVHEALPTAAKLQVVTANVDACNPSRRAGIAAELAAFADVEVRSRRDAVERSLVYTADSTMRRPPMATSPKKTLYGSIAARLACG
Ga0209415_1089112423300027905Peatlands SoilMQTLQNPCDVRAHDARAEIDRLMAELHRLVSRRGSSGRDAVQEALPTAAKLQVVTANVDACNPSRRAGIAAELAAFADVEVRLRRDAVERSLVYTADSTMRRLLGEPAHEI
Ga0209069_1027465223300027915WatershedsMQTLEPTDVRAHDARVEIDRLMSELHGLVSRGAHSACAAIDEALPAVAKLQVVTANVDACNPSRRPGVGAELVAMADARMRIRRDATERSLTYTAEATMRRLTGE
Ga0209069_1029118323300027915WatershedsMQTIPGARDADVDVDAAPATRANEQRAHAARAEIDRLMGELHALVARDDPSGRDAVRAALPAAAKLQVVTANVDACNPSRRPGLAAELVALADRQVKSRRDAIERSLAYTAESTMRRLTGER
Ga0268265_1121435523300028380Switchgrass RhizosphereVIRLAPCHEMVPMQALQFTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELMALADLRMRSMRDALERSLFYTAESTMRRLLEG
Ga0268265_1121549813300028380Switchgrass RhizosphereMQALQLIADVRVNDARIEIDQLMAELHELVSRGEMSGRNAVDEALPTAAKLQVVTTNVDACNPSRRPGIGRELVALADLRMRSMRDSLERSLFYTAESTMRRLLEG
Ga0265334_1006149913300028573RhizosphereTQPEQLAEPVRGHDARAEIERLMTELHRLVSHSARSGRDAVNEALPTAAKLQVVTANVDACNPSRQPGLANDLVTLADQQARTRRDATERILVYTSDATMRRLTTPEPA
Ga0265322_1017286013300028654RhizosphereVRGHDARAEIERLMTELHRLVSHSARSGRDAVNEALPTAAKLQVVTANVDACNPSRQPGLANDLVTLADQQARTRRDATERILVYTSDATMRRLTTPEPA
Ga0265338_10000501153300028800RhizosphereMQTQPEQLAEPVRGHDARAEIERLMTELHRLVSHSARSGRDAVNEALPTAAKLQVVTANVDACNPSRQPGLANDLVTLADQQARTRRDATERILVYTSDATMRRLTTPEPA
Ga0247827_1067674023300028889SoilVIRLAPCHEMVPMQALQFTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA
Ga0311347_1019452723300029923FenMQITPTASEVLAQRGARAHDARLEIDQLMAELHRLVSRAERSGRDAVEEALPAAAKLQVVTSNVDACNPSRRPGLAAELVALADLRVKSRKDAIERSLVYTADTTMRRLLGEA
Ga0311337_1105476113300030000FenMQIIETADAVDTQPVDQQRAHSGRAEIDRLMAELHELVSRCERTGRAAVEGALPAAAKLQVVTANVDACNPSRRPGLAAELVALADQRVKPRRDAIERSLTYTAESTMRRLTGEPGADPE
Ga0302323_10205801113300031232FenNAPSGGGRAKVTMKTQQVEQARHDPLASPVRAHAARAEIDGLMAELHHLVSRSARSGRDAVEDALPAAAKLQVVTANVDACNPSRRPGIATDLVTMADQRDATERILVYTSDATMRRLTDSRPA
Ga0265340_1027548213300031247RhizosphereMQTLQPISEVRTHDARLEIDRLMTELHSLVSRGEMSGRLAVGEALTTAAKLQAVTANVDACNPSRRPGIDAELVALADERMRSMPRALERSLVYTAE
Ga0265327_1053685013300031251RhizosphereVTMQTLQPTTETRETRVHDARFEIERLMSELHGLVSRGAKSGRSAVDEALPAVAKLQTVTANVDACNPSRRPDLARELVGIADRRIRSMPRALERSLVYTAESTMRRLLGEN
Ga0265316_1028797623300031344RhizosphereAGEAKVAMQTQPEQLAEPVRGHDARAEIERLMTELHRLVSHSARSGRDAVNEALPTAAKLQVVTANVDACNPSRQPGLANDLVTLADQQARTRRDATERILVYTSDATMRRLTTPEPA
Ga0265313_1013801713300031595RhizosphereMQTLQPTTETRETRVHDARFEIERLMSELHGLVSRGAKSGRSAVDEALPAVAKLQTVTANVDACNPSRRPDLARELVGIADRRIRSMPRALERSLVYTAESTMRRLLGEN
Ga0265314_1002561013300031711RhizosphereHDARAEIERLMTELHRLVSHSARSGRDAVNEALPTAAKLQVVTANVDACNPSRQPGLANDLVTLADQQARTRRDATERILVYTSDATMRRLTTPEPA
Ga0310813_1156803523300031716SoilIRDNAARIEIDQLMAELHELVSRGEVSGRSAIDDALPTAARLQVVTANVDACNPSRRPAIARALVALADMRMRSMRDPLERSLFYTAESTMRRLLGEA
Ga0310900_1056967423300031908SoilMVPMQALQFTDVRVNDARFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA
Ga0311301_1002131033300032160Peatlands SoilMQTLQNPCDVRAHDARAEIDRLMAELHRLVSRRGSSGHDAVQEALPTAAKLQVVTANVDACNPSRRAGIAAELAAFADVEVRLRRDAVERSLVYTADSTMRRLLGEPAHEI
Ga0311301_1009154843300032160Peatlands SoilMQTLQTQREVRAHDARSEIDRLMAELHRLVSRGGSSGRDAVQEALPTAAKLQVVTANVDACNPSRHADIAAELAAFADVAVRSRRDAVERSLVYTADSTMRRLLGESARVI
Ga0310896_1040375623300032211SoilFEIDQLMAELHELVSRGETSGRTAVDEALLTAAKLQAVTANVDACNPSRRPGIDRELVALADLRMRSMRDALERSLFYTAESTMRRLLEA
Ga0315271_1196406413300032256SedimentIDRLMSELHDLVSRSERSACAAIDEALPTVARLQVVTANVDACNPSRRPGAASELFAIADTRMRTRRDATERSLIYTADATMRRLLGE
Ga0335069_1054912633300032893SoilMQTLQPASEPRVHDARNEIDQLMAELHRLVSRAQATGRDAVDRALPTAARLQVVTANVDACNPTRLPAAGGEMVALADRHMRLRRDVTERSLYYTADCTMRRLLGEPGG
Ga0310810_1091539723300033412SoilMAPMQTLQLPPYIRDNAARIEIDQLMAELHELVSRGEVSGRSAIDDALPTAARLQVVTANVDACNPSRRPAIARALVALADMRMRSMRDPLERSLFYTAESTMRRLLG
Ga0310810_1126988013300033412SoilMQALQITEVRVNDARLEIDQLMTELHDLVARGETSGRTAVDEALLTAAKLQAVTANVDACNPSRMPGIDAELVALADVRMRSMRDALERSLFYTAESTM
Ga0370481_0094877_14_3463300034281Untreated Peat SoilMQTLQPDNTRLHETRPHDARAEIDRLMSELHGLVSRSVSSACAAIDEALPTAAKLQVVTANVDACNPTRRPGVAAELVALADTRMRIRRDATERSLTYTAEATMRRLLDQ
Ga0370497_0116752_216_5573300034965Untreated Peat SoilMQITPTASERLTQRGVHAHDARLEIDRLMAELHTLVSRAESSGRDAVQEALPAAAKLQVVTSNVDACNPSRRPGIAAELVALADLRVKSRRDSIERSLVYTADTTMRRLLGET

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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