NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F087280

Metagenome / Metatranscriptome Family F087280

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087280
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 119 residues
Representative Sequence MVSQNGMQRLRVLSFLIGLMIVVAPALAQQQESQQPAPVPSNPQTTDTKDGKDDKDKQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDW
Number of Associated Samples 78
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.24 %
% of genes near scaffold ends (potentially truncated) 94.55 %
% of genes from short scaffolds (< 2000 bps) 93.64 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.091 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(53.636 % of family members)
Environment Ontology (ENVO) Unclassified
(52.727 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.545 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 29.08%    β-sheet: 0.00%    Coil/Unstructured: 70.92%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF13620CarboxypepD_reg 43.64
PF00764Arginosuc_synth 0.91
PF00873ACR_tran 0.91
PF07486Hydrolase_2 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 0.91
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 0.91

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.09 %
UnclassifiedrootN/A0.91 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001162|JGI12714J13572_1000322All Organisms → cellular organisms → Bacteria → Acidobacteria1863Open in IMG/M
3300001167|JGI12673J13574_1008993All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300001593|JGI12635J15846_10142071All Organisms → cellular organisms → Bacteria1659Open in IMG/M
3300001661|JGI12053J15887_10241987All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300004631|Ga0058899_12052163All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium914Open in IMG/M
3300005171|Ga0066677_10623192All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300005176|Ga0066679_10608307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium713Open in IMG/M
3300005177|Ga0066690_10061457All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2324Open in IMG/M
3300005177|Ga0066690_10150998All Organisms → cellular organisms → Bacteria1527Open in IMG/M
3300005446|Ga0066686_10866239All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300005447|Ga0066689_10935547All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005447|Ga0066689_11041806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300005450|Ga0066682_10967404All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300005554|Ga0066661_10836088All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300005556|Ga0066707_10201332All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1285Open in IMG/M
3300005568|Ga0066703_10889694All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83508Open in IMG/M
3300005586|Ga0066691_10140441All Organisms → cellular organisms → Bacteria1384Open in IMG/M
3300005586|Ga0066691_10959738All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300006354|Ga0075021_11030100All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300007255|Ga0099791_10130506All Organisms → cellular organisms → Bacteria → Acidobacteria1167Open in IMG/M
3300007258|Ga0099793_10066872All Organisms → cellular organisms → Bacteria → Acidobacteria1616Open in IMG/M
3300007258|Ga0099793_10355515All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300009038|Ga0099829_10160644All Organisms → cellular organisms → Bacteria → Acidobacteria1799Open in IMG/M
3300009038|Ga0099829_10516066All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300009088|Ga0099830_11130286All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300009088|Ga0099830_11647894All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300009089|Ga0099828_11753147All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300009137|Ga0066709_101958414All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium813Open in IMG/M
3300009137|Ga0066709_104644791All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300010325|Ga0134064_10040585All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1399Open in IMG/M
3300010326|Ga0134065_10314798All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300010376|Ga0126381_102791880All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300011120|Ga0150983_14578517All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300011271|Ga0137393_10219021All Organisms → cellular organisms → Bacteria1610Open in IMG/M
3300012096|Ga0137389_10304599All Organisms → cellular organisms → Bacteria1349Open in IMG/M
3300012096|Ga0137389_10931233All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300012189|Ga0137388_10528561All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1096Open in IMG/M
3300012199|Ga0137383_10533560All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium859Open in IMG/M
3300012202|Ga0137363_11093784All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300012202|Ga0137363_11102225All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300012202|Ga0137363_11439190All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300012203|Ga0137399_10700874All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300012203|Ga0137399_11238055All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium628Open in IMG/M
3300012206|Ga0137380_11477322All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300012208|Ga0137376_10388586All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300012208|Ga0137376_11016300All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M
3300012209|Ga0137379_10768649All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300012210|Ga0137378_11645640All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300012211|Ga0137377_11901393All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300012285|Ga0137370_10154745All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300012363|Ga0137390_11003018All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300012363|Ga0137390_11242513All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium691Open in IMG/M
3300012363|Ga0137390_11383205All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300012582|Ga0137358_10617468All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium727Open in IMG/M
3300012582|Ga0137358_10644888All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium709Open in IMG/M
3300012582|Ga0137358_10872726All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300012918|Ga0137396_10393794All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1026Open in IMG/M
3300012918|Ga0137396_10860890All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium665Open in IMG/M
3300012918|Ga0137396_11013307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium600Open in IMG/M
3300012923|Ga0137359_11323289All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300012925|Ga0137419_11099853All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium662Open in IMG/M
3300012925|Ga0137419_11617692All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300012927|Ga0137416_10307841All Organisms → cellular organisms → Bacteria1315Open in IMG/M
3300012927|Ga0137416_10726294All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300012927|Ga0137416_10759936All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium855Open in IMG/M
3300012927|Ga0137416_10947043All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300012927|Ga0137416_10989989All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300012927|Ga0137416_11547733All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300012930|Ga0137407_12354510All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300015054|Ga0137420_1216415All Organisms → cellular organisms → Bacteria → Acidobacteria1596Open in IMG/M
3300015241|Ga0137418_10000466All Organisms → cellular organisms → Bacteria35986Open in IMG/M
3300015241|Ga0137418_10065690All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3312Open in IMG/M
3300015241|Ga0137418_10293362All Organisms → cellular organisms → Bacteria1363Open in IMG/M
3300015241|Ga0137418_10471947All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300015356|Ga0134073_10104259All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300018468|Ga0066662_10408098All Organisms → cellular organisms → Bacteria1197Open in IMG/M
3300018482|Ga0066669_10077933All Organisms → cellular organisms → Bacteria → Acidobacteria2219Open in IMG/M
3300018482|Ga0066669_10401675All Organisms → cellular organisms → Bacteria → Acidobacteria1161Open in IMG/M
3300020018|Ga0193721_1173132All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300020022|Ga0193733_1007779All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3053Open in IMG/M
3300020199|Ga0179592_10387266All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300020579|Ga0210407_10826709All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300021086|Ga0179596_10423973All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300021088|Ga0210404_10638165All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium606Open in IMG/M
3300021170|Ga0210400_11067558All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300025939|Ga0207665_10448299All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas990Open in IMG/M
3300026309|Ga0209055_1118315All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300026317|Ga0209154_1254664All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300026318|Ga0209471_1220243All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300026318|Ga0209471_1273843All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium566Open in IMG/M
3300026324|Ga0209470_1336207All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300026332|Ga0209803_1244632All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300026359|Ga0257163_1037428All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300026529|Ga0209806_1206644All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300026538|Ga0209056_10234248All Organisms → cellular organisms → Bacteria1316Open in IMG/M
3300026547|Ga0209156_10118938All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300026551|Ga0209648_10244074All Organisms → cellular organisms → Bacteria1335Open in IMG/M
3300026555|Ga0179593_1100925All Organisms → cellular organisms → Bacteria1484Open in IMG/M
3300026557|Ga0179587_10981146All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300027172|Ga0208098_1006937All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300027862|Ga0209701_10295037All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300027862|Ga0209701_10374427All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300027882|Ga0209590_10192103All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300027903|Ga0209488_10026048All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4252Open in IMG/M
3300028536|Ga0137415_10286194All Organisms → cellular organisms → Bacteria1453Open in IMG/M
3300028536|Ga0137415_10621850All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300031057|Ga0170834_105585107All Organisms → cellular organisms → Bacteria1583Open in IMG/M
3300031231|Ga0170824_116697442All Organisms → cellular organisms → Bacteria1635Open in IMG/M
3300031820|Ga0307473_10720994All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium703Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil53.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil20.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.82%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.82%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.91%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.91%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001162Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2EnvironmentalOpen in IMG/M
3300001167Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026359Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-AEnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027172Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12714J13572_100032213300001162Forest SoilMVNQNGMPSLIVLSLLVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQK
JGI12673J13574_100899313300001167Forest SoilMVNQNGMQSLIVLSLLVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNGIL
JGI12635J15846_1014207143300001593Forest SoilMVSQNGMQRLRVLSFLIGLMIVVAPALAQQQESQQPAPVPSNPQTTDTKDGKDDKDKQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDW
JGI12053J15887_1024198713300001661Forest SoilVQWRIALSLLIGVLIVVSPALSRPQEPQQPAPAPSNPRKTNTKDGNDKDKQGETVGKSKLEKETGTVNDRIFEVLPNYGTVENSKELPPLTTGQKFRLATAGVLDWGAYPFNAILS
Ga0058899_1205216313300004631Forest SoilMVLSLLIGLMIVVAPALAQQQESQKPAPAPSNPQTTEKKDSKDDKDRQRGTVGRSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNGILSGIAQAKNDPKEW
Ga0066677_1062319213300005171SoilMFRQKGTPGHIVISLLIGLWIVASPALAQQPAPLPSDSQKTKEGKEDKDKDKPGETVGKSKLEKETGTINDRIFEVLPNYGTVENAKNLPPLTTGQKFRLATAGVFDWGAYPFNVILSGIAQAKNDPK
Ga0066679_1060830713300005176SoilMQGHIVLALLVGLLIVVSPALARRPEGQQPAPDPQKRSTKEGQEDKDKPGATVGKSKLEKETGTINDRIFEVLPNYGTVENIKNLPPLTAGQKFRLATAGVFDWGAYPFNIILSGIAQAKNDPKEWGQGW
Ga0066690_1006145753300005177SoilMVRQNGMQGHVVLSLLVGLLTVVAPALAQQPAPTPPDSQKTNRKDGKEDKDKDKPGQTVGKSQLEKETGTINDRIFEVLPNYGTVENAKDLPPLTTGQKFRLATAGAFDWGAY
Ga0066690_1015099833300005177SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQEFQQPAPVPSNPQTTDKKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTT
Ga0066690_1015316213300005177SoilMGLWAAASPALAQQLASQQSPAPTSDPPSPSAKNGREKKDGDVGIVGKSKLEKETGTVNDRIFEVIPNYGTVENASALPPLTGGQKFRLATAGVFDWGAYPFNGTLSAIAQA
Ga0066686_1086623913300005446SoilVSPMTGHDGKHRQIALLLLIGLLIVVAPALARRQESLQPAPGPSTQQPTNTKDGKDKEKQGETVGKSKLEKETGTINDRIFEVLPNYGMVENARELPPLTTGQKFRLATAGVFDWGSYPFNAI
Ga0066689_1093554713300005447SoilMVRQNDMQGHIALSVLVGLLLVVSPALARQQEGQQPAPDPQKRSTKEGKEDKDKPGGTVGKSKLEKETGTINDRIFEVLPNYGTVENTKNLPPLTAGQKFRLATAGVFDWGAYPFNVILAGIAQAKN
Ga0066689_1104180613300005447SoilMVRQNGTLDHLVISLLIGLLIVVSPALAQRQEPQQPAPPPSDSQKTKEGKEDKDKDKPGETVGKSKLEKETGTINDRIFEVLPNYGTVENAKHLPPLTTGQKFRLATAGVFDWGAYPFNVILSGIAQAKNDPKEWGQGWDAY
Ga0066682_1096740413300005450SoilGTKHCGNEVVPFATEMHGAGRQLGLSMVRQNDMQGHIVLSVLVGLLLVVSPALARQQEGQQPAPDPQKRSTKEGKEDKDKPGGTVGKSKLEKETGTINDRIFEVLPNYGTVENTKNLPPLTAGQKFRLATAGVFDWGAYPFNVILAGIAQAKNDPKEWGQGWDAYGK
Ga0066661_1083608813300005554SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQEFQQPAPVPSNPQTTDKKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQK
Ga0066707_1020133233300005556SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQESQQPAPVPSNPQTTDTKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKSRLATAGVFDWGAYPFNGILSGIAQAKNDPKEWG
Ga0066703_1088969413300005568SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQEFQQPAPVPSNPQTTDKKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNGILSGIAQAKND
Ga0066691_1014044113300005586SoilLTMSRRNGIRLQIVLSLLIGLLIAASPTSAQQPEPQQPAPAPSTPQTTDAKDSKEKNKQGATVGKSKLERETGTVNDRIFEVLPNYGTVENANELPPLKAGQKFRLATAGVFDWG
Ga0066691_1095973813300005586SoilGTKHCGNEVVPFATEMHGAGRQLELSMVRQNEMQGHIVLALLVGLLIVVSPALARRPEGQQPAPGPQKRSTKEGQEDKDKPGATVGKSKLEKETGTINDRIFEVLPNYGTVENIKNLPPLTAGQKFRLATAGVFDWGAYPFNIILSGIAQAKNDPKEWGQGWDAYGK
Ga0075021_1103010013300006354WatershedsMTGQNGTPCRIAFSLLIGVLITVAPALARQQDSAQPVPAPWDAQTTNAKDGKEDKDKPGETVGKSKLEKETGTINDRIFDVLPNYGTVENAKDLPPLT
Ga0099791_1013050633300007255Vadose Zone SoilMSGQKRMQGQIGLALVAGLLMVITPALARSQGTQQPTPAPADPPTTNAKDGKEDKNKAGETVGKSKLERETGTINDRIFEVLPNYGTVENAQARPPLTTGQKFRLATAGVFDWGAYPFNGILAGISQAKNDPKEWGQGWG
Ga0099793_1006687213300007258Vadose Zone SoilMQRLMVLSLLIGPTIVIAPALAQQPAPPPSDPQRKNTKDGKEDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFR
Ga0099793_1035551513300007258Vadose Zone SoilMVSQNRMQRLTVLSLLIGLMIIVAPALAQQQESQQPAPAPSNPRTTDTGDGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLAT
Ga0099829_1016064443300009038Vadose Zone SoilMVLSLLIGPTIVIAPALAQQPAPAPAPSDPQRKNTKDGKEDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNGILS
Ga0099829_1051606633300009038Vadose Zone SoilMPRNVALSLLIGLLVAVAPALAQQQEPQQPTPAPAEPKPTNAKDGKDPKEKGKQGQTVGKSKLEKETGTVNDRIFEVIPNYGTVENANELPPLTSGQKFRLATAS
Ga0099830_1113028623300009088Vadose Zone SoilMSRQNGMHRQIALSLLTGLLIGAPLVLAQQQEPPQPAPAPSNPQTTGVKDSKERDRQGETVGKSKLEKETGTINDRIFEVLPNYGTVEN
Ga0099830_1164789413300009088Vadose Zone SoilMKRQNGMQGHIAILLLIGLLVIVAPALARQQESQPPAPAPSEQQTTNTKDGKDGKDKENHGETVGKSKLEKETGTINDRIFEVLPNYGTVENAKDLPPLTTGQKFRLATAGVFDWAAYPFNGALSGIAQAKNDPKQWGQGWD
Ga0099828_1175314723300009089Vadose Zone SoilMIRQNGMSQRTGMAILIGLLAFASPALAQQQEPQQPAPPVTQPPTANTNGQNSKDKDKTADTVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLATGQKFRLATA
Ga0066709_10195841423300009137Grasslands SoilMVLLLLIGPTIVTAPALAQQPATAPSDPQRKNTKEGKEDKHNDKPGETVGKSKLEKETGTVNDLIFEVLPNYGTVENAKELPPLTTGQKSRLATAGVFDWGAYPFNGILSGIAQAKNDPKEWGQ
Ga0066709_10464479113300009137Grasslands SoilLAHRRYLQLSPWRLAFQQPAPVHSNPQTTDKKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNGILSGIAQAKNDPKEWGQ
Ga0134064_1004058523300010325Grasslands SoilMVRQNEMQGHIVLAFLVGLLMVVSPALARRQEGQQPAPDPQKRSTKEGKEDKDKPGATVGKSKLEKETGTINDRIFEVLPNYGTVEDVKNLPPLTAGQKFRLATAGVFDWGAYPFNIILSGIAQAKNDPKEWRQG*
Ga0134065_1031479813300010326Grasslands SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQEFQQPAPVPSNPQTTDKKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATVGVFDWGAYPFNGILSGIAQ
Ga0126381_10279188023300010376Tropical Forest SoilMTRQEKSRLVFAATVFLGLWAVASQALAQQPDSQQPPPPKTDPSSSVEKNDKDKDKKQDEQPGGTVGKSKLEKETGTVNDRIFEVLPNYGTVENTNALPPLSTGQKFRIATASVFDWGAYPFNGALSAIAQARNDPKEWGQGWDAYG
Ga0150983_1457851713300011120Forest SoilMIRQIRMPQTIALLLLMGLFTFSSPLRAQQQEPQKPTPVPSDPPTTNAKGGKDAKEKDKAGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPISSGQKFRLATASVFDWAAYPFNGALSAIAQAKNDPKEWGQG
Ga0137393_1021902143300011271Vadose Zone SoilMVLLIGLWAVVSPALAQQSESQQPPTQDPPPSSAKNEKDKKDPGQPGGTVGKSKLEKETGTVNDRIFEVIPNYGTVENAKELPALTTGQKFRIATASVFDWGSYPFNGALSGIAQARNNPKEWGQGWDAYG
Ga0137389_1030459913300012096Vadose Zone SoilMVNQNGMQRLIVLSILVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGA
Ga0137389_1093123313300012096Vadose Zone SoilMTGQNGMQSHIAISILIGLLIAVGPTLAQQQESQQPGPAPSYPQTTNTKDGKDANDKGKPVGTVGKSKLEKETGTVNDRIFEVLPNYGTVENAEELPPLTTGQKFRLATAGVFDWGAYP
Ga0137388_1052856113300012189Vadose Zone SoilMIRQIGMLGHIAVSFLVGLLIVVAPASARQQDTQQPAPAPPDLQSANTRDGKGDKDKPDATVGKSKLEKETGTINDRIFEVLPNYGTVENAKELPPLTRGQKFRLATAGVFDWGSYPFNGILAGIEQARNDPK
Ga0137383_1053356023300012199Vadose Zone SoilMVLLLLIGPTIVTAPALAQQPATAPSDPQRKNTKDGKEDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTTGQKSRLATAGVFDWGAYPFNGILSGIAQAKNDPKEWG
Ga0137363_1109378413300012202Vadose Zone SoilMVLSILVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGA
Ga0137363_1110222513300012202Vadose Zone SoilMNRQNGMQRRIALSLLIGLLVAVAPACAQQPELQQPTPAPSDPQPKSAKDGKAEQDKQGGTVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTSGQKFRLATAGVFDWAAYPFNGVLSAIAQAKNDP
Ga0137363_1143919013300012202Vadose Zone SoilMVNQNGMQSLIVLSILVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQHGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGA
Ga0137399_1070087423300012203Vadose Zone SoilMDGQNGMQRHIALSLLIGLSIAVSPVLAQKQEPQQPARSTSNPQTTDTKDGKKDDKDRQRGTVGKSKLEKDTGTINVRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGGLSLQRHPLGNRTSKE*
Ga0137399_1123805513300012203Vadose Zone SoilMVSQNRMQRLMVLSLLIGLMIIVAPALAQQQESQQPAPAPSNPRTTDTGDGKDDKDRQRGTVGKRKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNVILSGIAQAK
Ga0137380_1147732213300012206Vadose Zone SoilMSRQIGVQRQIALLFIIGHLCAVLPALAQQQETQQPVRVPSDPQTAKTKDGKENKDKSGETVGKSKLERETGTVNDRIFEVLPNYGTVENAGELPPLTSGQKFRLATAGVFDWGAYPFNGALSAIAQAKNDPKAWGQG
Ga0137376_1038858613300012208Vadose Zone SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQESRQPAPVPSNPQTTDTKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWG
Ga0137376_1101630013300012208Vadose Zone SoilMVRQNEMQGHIVLALLVGLLIVVSPALARRPEGQQPAPDPQKRSTKEGQEDKDKPGATVGKSKLEKETGTINDRIFEVLPNYGTVENIKNLPPLTAGQKFRLATAGVFDWGAYPFNIILSGIAQAKN
Ga0137379_1076864923300012209Vadose Zone SoilMPRNIALSLLIGLLVAVAPALAQQQEPQPPTTATAEPKPTNAKDGKDPKEKDKQGQTVGKSKLERETGTVNDRIFEVLPNYGTVENANELPPLTSGQKFRLATASVFDWGAYPFNGVLSA
Ga0137378_1164564013300012210Vadose Zone SoilMSRQIGVQRQIALLFIIGHLCAVLPALAQQQETQQPVRVPSDPQTAKTKDGKENKDKSGETVGKSKLERETGTVNDRIFEVLPNYGTVENAGELPPLTSGQKFRLATAGVFDWGAYPFNGALSAIAQAKND
Ga0137377_1190139313300012211Vadose Zone SoilMSRQNGMHRRIALSLLAGFLIAVSPVLAQEPEAQQPAPAPSNPQTTNTKDSKEKDKRGETVGKSKLEKETGTVNDRIFEVLPNYGTVENA
Ga0137370_1015474533300012285Vadose Zone SoilVERRHPFVAGIQILWETISVVMSRQIGVQRQIVLLLLVGLLSAAMPALAQQEETQQPTPVPSDPQTANEKDGKEYRHGETVGKSKLERETGTINDRIFEVLPNYGTVENAINLPPLTTGQKFRLATAGVFDWGAYPYNGILAGIEQA
Ga0137390_1100301813300012363Vadose Zone SoilMHRRIALSLLAGFLIAVSPVLAQEPEAQQPAPAPLNPQTTDTKDSKEKDKRGETVGKSKLEKETGTVNDRIFEVLPNYGTVENANDLPALTTGQKFRLATAGVFDWGAYPFNGILSAIAQAKNDPKAWGQGWDAYGKRY
Ga0137390_1124251313300012363Vadose Zone SoilMQRLMVLSLLIGPTIVIAPALAQQPAPAPAPSDPQRKNTKDGKEDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAY
Ga0137390_1138320513300012363Vadose Zone SoilMDRQSGMQPHIAPSLLIALLIVVSPALAQQQECRQPAPAPSNPQTTDTKDGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAY
Ga0137358_1061746823300012582Vadose Zone SoilMVSQNRMQRLTVLSLLIGLMIIVAPALAQQQESQQPAPAPSNPRTTDTGDGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNVILSGIAQAKNDPKEWGQGW
Ga0137358_1064488823300012582Vadose Zone SoilMVRQNGMQRLMVLSLLIGPTIVIAPALAQQPAPAPSDPQRKNTKDGKEDKYNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLT
Ga0137358_1087272613300012582Vadose Zone SoilMVLSILVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPP
Ga0137396_1039379423300012918Vadose Zone SoilMVSQNRMQRLMVLSLLIGLMIIVAPALAQQQESQQPAPAPSNPRTTDPGDGKDDKGRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNVILSGIAQAK
Ga0137396_1086089013300012918Vadose Zone SoilMQRLMVLSLLIGPTIVIAPALAQQPAPAPSDPQRKNTKDGKEDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLAT
Ga0137396_1101330713300012918Vadose Zone SoilMQRLMVLSLLIGPTIVIAPALAQQPAPAPSDPQRKNTKDGKEDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGV
Ga0137359_1132328913300012923Vadose Zone SoilMVSQNRMHRLTVLSLLIGLMIIVAPALAQQQESQQPAPAPSNPRTTDTGDGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFR
Ga0137419_1109985323300012925Vadose Zone SoilMVLSLLIGPTIVIAPALAQQPAPPPSDPQRKNTKDGKVDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRL
Ga0137419_1161769213300012925Vadose Zone SoilMDGQNGMQRHIALSLLIGLSIAVSPVLAQKQEPQQPARSTSNPQTTDTKDGKKDDKDRQRGTVGKSKLEKDTGTINVRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGGAYPFNGIRSGIAQAKNDPKEWLFVVRTDSGHERFNFSESTGN
Ga0137416_1030784133300012927Vadose Zone SoilMDGQNGMQRHIALSLLIGLSIAVSPVLAQKQEPQQPARSPSNPQTTDTKDGKKDDKDRQRGTVGKSKLEKDTGTINVRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGGAYPHKRLLKMLLLDGLLGYAWGL*
Ga0137416_1072629423300012927Vadose Zone SoilMTGQNGMQWCIALSLLIGVLIVVSPALSRPQEPQQPAPAPSNPRKTNTKDGNDKDKQGETVGKSKLEKETGTVNDRIFEVLPNYGTVENSKELPPLTTGQKFRLATAGVLDWGAYPFNAILSG
Ga0137416_1075993623300012927Vadose Zone SoilMVSQNRMQRLMVLSLLIGLMIIVAPALAQQQESQQPAPAPSNPRTTDTGDGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNVILSGIAQAKDDP
Ga0137416_1094704313300012927Vadose Zone SoilMFRQNGRHGHIVISLLIGLLLVGSPALARQQEPQQPAPPPSDSQKTKDRKEDKDKDKPGETVGKSKLEKETGTINDRIFEVLPNYGTVENAKNLPPLRTGQKFRLATAGVFDWGAYPFNVILSGIAQAKNDPKEWG
Ga0137416_1098998923300012927Vadose Zone SoilMVNQNRMQRLMVLALLIGLALVVAPALAQQQESQQPAPATSNAQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFD
Ga0137416_1154773323300012927Vadose Zone SoilMVRQNGMQRLMVLSLLIGPTIVIAPALAQQPAPAPSDPQTKNTKDGKEDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPMTMRQKFRLATAGVFDWGAYPFNGILSGI
Ga0137407_1235451013300012930Vadose Zone SoilMIRQIGMTGHVVGALLIGVLIVVAPASAWQQDTPSPAPASSDLQPAKTRDGKEERDKPNATVGKSKLEKETGTINDRIFEVLPNYGTVENAKELPPLTIGQKFRLATAGVFDWGSYPFNGIL
Ga0137420_121641513300015054Vadose Zone SoilMVSQNRMQRLTVLSLLIGLMIIVAPALAQQQESQQPAPAPSNPRTTDPGDGKDDKGRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNVILSGIAQATFGNR
Ga0137418_10000466363300015241Vadose Zone SoilMVSQNRMQRLTVLSLLIGLMIIVAPALAQQQESQQPAPAPSNPRTTDTGDGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQ
Ga0137418_1006569013300015241Vadose Zone SoilMVNQNRMQRLMVLALLIGLALVVAPALAQQQESQQPAPATSNAQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFR
Ga0137418_1029336233300015241Vadose Zone SoilMDGQNGMQRHIALSLLIGLSIAVSPVLAQKQEPQQPARSPSNPQTTDTKDGKKDDKDRQRGTVGKSKLEKDTGTINVRIFEVLPNYGTVENAKELPPLTTGQ
Ga0137418_1047194723300015241Vadose Zone SoilMSGQKRMQGQIGLALVAGLLMVITPALARSQGTQQPTPAPADPPTTNAKDGKEDKNKAGETVGKSKLERETGTINDRIFEVLPNYGTVENAQARPPLTTGQKFRLATSGSFISTATQRAII*
Ga0134073_1010425913300015356Grasslands SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQEFQQPAPVPSNPQTTDKKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFR
Ga0066662_1040809813300018468Grasslands SoilVSPMTGHDGMHRQIALLLLIGLLIVVAPALARRQESLQPAPGPSTQQPTNTKDGKDKEKQGETVGKSKLEKETGTINDRIFEVLPNYGTVENARELPPLTTGQKFRLATAGV
Ga0066669_1007793353300018482Grasslands SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQEFQQPAPVPSNPQTTDKKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVF
Ga0066669_1040167533300018482Grasslands SoilMVLLLLIGPTIVTAPALAQQPAPSDPQRKNTKDGKEDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFD
Ga0193721_117313213300020018SoilMVRQNGMQRLMVLSLLIGPTIVIAPALAQQPAPAPSDPQRKNTKDGKEDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAY
Ga0193733_100777963300020022SoilMVRQNEMQGHLMLALLVGLLMVVSPALARRQEGQQPAPDPQKRSTIEGKEDKDKPGETVGKSKLEKETGTINDRIFEVLPNYGTVENTKNLPPLTAGQKFRLATA
Ga0179592_1038726623300020199Vadose Zone SoilMVNQNGMQRLMVLSILVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTG
Ga0210407_1082670913300020579SoilMVLSLLIGLGFVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFN
Ga0179596_1042397323300021086Vadose Zone SoilMVNQNGMQRLMVLSILVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQHGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKEL
Ga0210404_1063816523300021088SoilMVSQNGMQRLRVLAPLIGLMIVVAPALAQPQASQQPAPVPSNPQTTDTKDGKNDKDKQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNGILSGIAQAKNDPKEWGQGWD
Ga0210400_1106755823300021170SoilMVNQNGMQSLIVLSFLVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKF
Ga0207665_1044829923300025939Corn, Switchgrass And Miscanthus RhizosphereMSRQNGMPRNIALSLLIGLLVAVAPALAQQQEPQQPTPAPAEPKPTNAKDGKGPKEKDKQGQTVGKSKLERETGTVNDRIFEVLPNYGTVENANELPPLTSGQKFRLATASVFDWGAYPFNGVLS
Ga0209055_111831513300026309SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQEFQQPAPVPSNPQTTDKKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNGILSGIAQAKNDPKEWGQGWDAY
Ga0209154_125466423300026317SoilMVLLLLIGPTIVTAPALAQQPATAPSDPQRKNTKDGKEDKHNDKPGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKELPPLTTGQKSRLATAGVFDW
Ga0209471_122024323300026318SoilMQIPRETIGVVMIRQIGAQRQIVLLFMIGLLGAVLPASAQQQETQQPAPVPPDPQTANTKDGKGDRDKPGETVGKSKLEKETGTINDRIFEVLPNYGTVENAKDLPPLTTGQKFRLATAGVFDWGSYPFNGILAG
Ga0209471_127384313300026318SoilMVRQNEMQGHIVLALLVGLLIVVSPALARRPEGQQPAPDPQKRSTKEGQEDKDKPGATVGKSKLEKETGTINDRIFEVLPNYGTVENIKNLPPLTAGQKFRLATAGVFDWGAYPFNIILSGIAQAKNDPKEWGQGW
Ga0209470_133620713300026324SoilMVRQNDMQGHIVLSVLVGLLLVVSPALARQQEGQQPAPDPQKRSTKEGKEDKDKPGGTVGKSKLEKETGTINDRIFEVLPNYGTVENTKNLPPLTAGQKFRLATAGVFDWGAY
Ga0209803_124463213300026332SoilVERRHPFVAGMETLWETIGDVMIRQIGVQRQIVLLLLVGLLSTAMPALAQQEETQQPTPVPSDPQTANEKDGKEYRPGETVGKSKLERETGTINDRIFEVLPNYGTVENAINLPPLTTGQKFRLATAGVFDWGAYPFNGILALESQARAVRRILLSSSPMQALPATD
Ga0257163_103742823300026359SoilMVSQNRMQRLTVLSLLIGLMIIVAPALAQQQESQQPAPAPSNPRTTDPGDGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFD
Ga0209806_120664423300026529SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQEFQQPAPVPSNPQTTDKKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKSRLATAGVF
Ga0209056_1023424843300026538SoilMVRQNEMQGHIVLALLVGLLIVVSPALARRPEGQQPAPDPQKRSTKEGQEDKDKPGATVGKSKLEKETGTINDRIFEVLPNYGTVENIKNLPPLTAGQKFRLATAGVF
Ga0209156_1011893813300026547SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQPQEFQQPAPVPSNPQTTDKKVGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNGIL
Ga0209648_1024407433300026551Grasslands SoilMVNQNGMQSLMVLSILVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQHGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKF
Ga0179593_110092513300026555Vadose Zone SoilMVRQNEMQGHIVLSLLVGLLIVVSPALARRQEGQQPAPDPQKRSTKERKEDKDKPGETVGKSKLEKETGTINDRIFEVLPNYGTVENTQNLPPLTAGQKFRLAT
Ga0179587_1098114613300026557Vadose Zone SoilMVSQNRMHRLTVLSLLIGLMIIVAPALAQQQESQQPAPAPSNPRKTDPGDGKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNVILSGIAQPKNDPKEWGQGWDAYGK
Ga0208098_100693713300027172Forest SoilMIRQIRMPQTIALLLLIGLFLFGSPLRAQQQEPQKPTPVPSDPPTTNTKDVKDAKEKDKAGETVGKSKLEKETGTVNDRIFEVLPNYGTVENAKSLPPITSGQKFRLATASVFDWAA
Ga0209701_1029503713300027862Vadose Zone SoilMPRKIVLSLLIGLLVGVAPALAQQQESQQPAPVPSEPKATNAKDGKDKEKQSGTVGKSKLEKETGTVNDRIFEVLPNYGTVENANELPPLTSGQKFRLATAGVFDWAAYPFNGVLSAIAQAK
Ga0209701_1037442723300027862Vadose Zone SoilMSRQNGMPCNIALSLLIGLLVAVAPALAQQQESQPTPAPAEPKPTNAKDGKDPKEKDKQGQTVGKSKLEKETGTVNDRIFEVLPNYGTVENANELPPLTSGQKFRLATASVFDWGA
Ga0209590_1019210313300027882Vadose Zone SoilMVSQNGMQRLLVLSGLIGLMIVVAPALAQQQESQQPAPVRSNPQTTDTRVGKDDKDRQRGTVGKSKLERDTGTVNDRIFEVLPNYGTVENAKELPPLT
Ga0209488_1002604873300027903Vadose Zone SoilMVNQNGMQSFIVLSILVGLMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLAT
Ga0137415_1028619413300028536Vadose Zone SoilMVRQNEMQGHIVLSLLVGLLIVVSPALARRQEGQQPAPDPQKRSTKERKEDKDKPGETVGKSKLEKETGTINDRIFEVLPNYGTVENNKNLPPLTAGQKFRL
Ga0137415_1062185013300028536Vadose Zone SoilMQWCIALSLLIGVLIVVSPALSRPQEPQQPAPAPSNPRKTNTKDGNDKDKQGETVGKSKLEKETGTVNDRIFEVLPNYGTVENSKELPPLTTGQKFRLATAGVLDWGAYPFNAILSG
Ga0170834_10558510713300031057Forest SoilMPRDIALSLLIGLLVAVAPALAQQQEPQQPTPAPAEPKPANAKDGKGPKEKDKQGQTVGKSKLEKETGTVNDRIFEVLPNYGTVENANELPPLTSGQKFRL
Ga0170824_11669744213300031231Forest SoilMPRDIALSLLIGLLVAVAPALAQQQEPQQPTPAPAEPKPANAKDGKGPKEKDKQGQTVGKSKLEKETGTVNDRIFEVLPNYGTVENANELPPLTSGQKFRLATASVFDWGAYP
Ga0307473_1072099423300031820Hardwood Forest SoilMLVVAPALAQQQESQQPAPAPSNPQTTDKKDSKDDKDRQRGTVGKSKLEKDTGTVNDRIFEVLPNYGTVENAKELPPLTTGQKFRLATAGVFDWGAYPFNGILSAIAQAKNDPK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.