Metagenome / Metatranscriptome Family F087169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087169
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	113 residues
Representative Sequence	MAEPWLELDALLRERLRDVLQEPPRPLTESELRSLLEEGRACMLILSGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAALETRAHEVRASWQRQIVDRA
Number of Associated Samples	93
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.36 %
% of genes near scaffold ends (potentially truncated)	30.00 %
% of genes from short scaffolds (< 2000 bps)	76.36 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.545 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.727 % of family members)
Environment Ontology (ENVO)	Unclassified (40.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.31% β-sheet: 0.00% Coil/Unstructured: 31.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.47.1.1: STAT	d1bg1a1	1bg1	0.7397
a.118.27.1: DIL domains from class V myosins	d2f6hx_	2f6h	0.71574
a.47.2.1: t-snare proteins	d1ez3a_	1ez3	0.70884
a.7.1.1: Spectrin repeat	d7a8ta2	7a8t	0.70467
a.183.1.1: Nop domain	d5ganf2	5gan	0.70038

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01042	Ribonuc_L-PSP	31.82
PF00903	Glyoxalase	21.82
PF12681	Glyoxalase_2	12.73
PF02012	BNR	3.64
PF02594	DUF167	2.73
PF01569	PAP2	2.73
PF03176	MMPL	1.82
PF00202	Aminotran_3	0.91
PF13669	Glyoxalase_4	0.91
PF13424	TPR_12	0.91
PF04156	Obsolete Pfam Family	0.91
PF00583	Acetyltransf_1	0.91
PF11837	INV_N	0.91
PF10604	Polyketide_cyc2	0.91
PF00775	Dioxygenase_C	0.91
PF00480	ROK	0.91
PF00892	EamA	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	31.82
COG1872	Uncharacterized conserved protein YggU, UPF0235/DUF167 family	Function unknown [S]	2.73
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	1.82
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.82
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	1.82
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.55 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.36 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	66.36 %
Unclassified	root	N/A	15.45 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.27 %
Unclassified	root	N/A	15.45 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	14.55 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	4.55 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.91 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.55 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.55 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.91 %
Dermabacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermabacteraceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.55 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.82 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Brachybacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermabacteraceae → Brachybacterium	0.91 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.45 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.55 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.82 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Brachybacterium phenoliresistens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermabacteraceae → Brachybacterium → Brachybacterium phenoliresistens	0.91 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig805788	Not Available	998	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2065542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100235046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300000443\|F12B_11767240	Not Available	529	Open in IMG/M
3300000550\|F24TB_10303402	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300000956\|JGI10216J12902_108205560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1318	Open in IMG/M
3300000956\|JGI10216J12902_113281879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	931	Open in IMG/M
3300000956\|JGI10216J12902_121670365	Not Available	533	Open in IMG/M
3300004114\|Ga0062593_101925255	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300004480\|Ga0062592_101568857	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005162\|Ga0066814_10001860	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300005166\|Ga0066674_10035151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2230	Open in IMG/M
3300005175\|Ga0066673_10598679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300005328\|Ga0070676_10835649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300005329\|Ga0070683_100005871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10274	Open in IMG/M
3300005329\|Ga0070683_100348208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1411	Open in IMG/M
3300005344\|Ga0070661_101763404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermabacteraceae → Brachybacterium → Brachybacterium phenoliresistens	525	Open in IMG/M
3300005526\|Ga0073909_10075588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300005535\|Ga0070684_100002378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13871	Open in IMG/M
3300005535\|Ga0070684_100602254	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300005549\|Ga0070704_100146106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1853	Open in IMG/M
3300005558\|Ga0066698_10143074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1610	Open in IMG/M
3300005564\|Ga0070664_100008805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8178	Open in IMG/M
3300005577\|Ga0068857_101020828	Not Available	797	Open in IMG/M
3300005713\|Ga0066905_100008171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4749	Open in IMG/M
3300005713\|Ga0066905_100182373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1550	Open in IMG/M
3300005713\|Ga0066905_100491318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1018	Open in IMG/M
3300005764\|Ga0066903_107300930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300005983\|Ga0081540_1000687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31570	Open in IMG/M
3300006572\|Ga0074051_11416340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1074	Open in IMG/M
3300006573\|Ga0074055_11822403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	604	Open in IMG/M
3300006574\|Ga0074056_11719198	Not Available	631	Open in IMG/M
3300006574\|Ga0074056_11818826	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300006575\|Ga0074053_11981025	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300006576\|Ga0074047_12063147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300006577\|Ga0074050_10006902	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300006581\|Ga0074048_10059414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3287	Open in IMG/M
3300006604\|Ga0074060_11729903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300006604\|Ga0074060_11792780	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300006605\|Ga0074057_10006065	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300006605\|Ga0074057_10017776	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300006852\|Ga0075433_10726858	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300006953\|Ga0074063_14113509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1293	Open in IMG/M
3300006953\|Ga0074063_14282684	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300009148\|Ga0105243_10051669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3252	Open in IMG/M
3300009162\|Ga0075423_10972314	Not Available	901	Open in IMG/M
3300009176\|Ga0105242_11637875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300010047\|Ga0126382_11959883	Not Available	556	Open in IMG/M
3300010154\|Ga0127503_10907396	Not Available	692	Open in IMG/M
3300010358\|Ga0126370_10630903	Not Available	930	Open in IMG/M
3300010362\|Ga0126377_10030937	All Organisms → cellular organisms → Bacteria	4522	Open in IMG/M
3300011106\|Ga0151489_1487444	Not Available	967	Open in IMG/M
3300012198\|Ga0137364_10036798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3171	Open in IMG/M
3300012200\|Ga0137382_10010018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4996	Open in IMG/M
3300012208\|Ga0137376_10028600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4400	Open in IMG/M
3300012358\|Ga0137368_10468700	Not Available	816	Open in IMG/M
3300012960\|Ga0164301_10693376	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300012987\|Ga0164307_10256488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1224	Open in IMG/M
3300015371\|Ga0132258_10455709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3189	Open in IMG/M
3300015372\|Ga0132256_100007675	All Organisms → cellular organisms → Bacteria	9271	Open in IMG/M
3300015372\|Ga0132256_100016578	All Organisms → cellular organisms → Bacteria	6467	Open in IMG/M
3300015372\|Ga0132256_101029069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300017656\|Ga0134112_10173458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300018028\|Ga0184608_10172312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	941	Open in IMG/M
3300018054\|Ga0184621_10022566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1950	Open in IMG/M
3300018055\|Ga0184616_10119389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300018072\|Ga0184635_10024180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2249	Open in IMG/M
3300018073\|Ga0184624_10123633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1122	Open in IMG/M
3300018081\|Ga0184625_10360111	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300018083\|Ga0184628_10164130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1158	Open in IMG/M
3300020016\|Ga0193696_1033541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1372	Open in IMG/M
3300021078\|Ga0210381_10022719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1687	Open in IMG/M
3300021510\|Ga0222621_1036402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300022756\|Ga0222622_10086603	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300022756\|Ga0222622_10248204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1204	Open in IMG/M
3300022756\|Ga0222622_11471753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300025934\|Ga0207686_10719236	Not Available	795	Open in IMG/M
3300025935\|Ga0207709_10117127	Not Available	1792	Open in IMG/M
3300025944\|Ga0207661_10019438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5064	Open in IMG/M
3300025944\|Ga0207661_10202124	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300025945\|Ga0207679_10007768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6817	Open in IMG/M
3300026078\|Ga0207702_10116559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2384	Open in IMG/M
3300026116\|Ga0207674_10004750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16287	Open in IMG/M
3300026327\|Ga0209266_1042235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2313	Open in IMG/M
3300027821\|Ga0209811_10060708	Not Available	1308	Open in IMG/M
3300028707\|Ga0307291_1028580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1296	Open in IMG/M
3300028708\|Ga0307295_10004835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3098	Open in IMG/M
3300028711\|Ga0307293_10004735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3572	Open in IMG/M
3300028720\|Ga0307317_10033295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1615	Open in IMG/M
3300028768\|Ga0307280_10133666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300028787\|Ga0307323_10039912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1644	Open in IMG/M
3300028787\|Ga0307323_10385612	Not Available	501	Open in IMG/M
3300028791\|Ga0307290_10026920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2027	Open in IMG/M
3300028791\|Ga0307290_10236959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	669	Open in IMG/M
3300028796\|Ga0307287_10253330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300028799\|Ga0307284_10007560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3131	Open in IMG/M
3300028802\|Ga0307503_10753757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300028803\|Ga0307281_10147701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	823	Open in IMG/M
3300028807\|Ga0307305_10207889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	899	Open in IMG/M
3300028811\|Ga0307292_10267652	Not Available	712	Open in IMG/M
3300028819\|Ga0307296_10777025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300028875\|Ga0307289_10231780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300028878\|Ga0307278_10147988	Not Available	1052	Open in IMG/M
3300030902\|Ga0308202_1003321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1827	Open in IMG/M
3300031170\|Ga0307498_10001017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4033	Open in IMG/M
3300031199\|Ga0307495_10104824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300031226\|Ga0307497_10237431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300031740\|Ga0307468_100490420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	971	Open in IMG/M
3300032013\|Ga0310906_11218207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300033550\|Ga0247829_11323824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.64%
Host-Associated	Host-Associated	16.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.82%
Plants	Host-Associated → Plants	16.36%
Aquatic	Environmental → Aquatic	11.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.82%
Sediment	Environmental → Aquatic → Sediment	10.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Freshwater	Environmental → Aquatic → Freshwater	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.09%
Loam	Environmental → Terrestrial → Soil → Loam	12.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.18%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_12646780	2124908045	Soil	MAEPWLELDAVLRGRLREVLREPPPPLTEAELRSLLEEGRACMLILGGELHRLERRLAVLDADPEPSFSALTQAFRRVNEFREHVEELGALLSSLEARAHEVRSSWRRQIVDRA
ICChiseqgaiiDRAFT_20655421	3300000033	Soil	MAEPWLELDAVLRGRLEEVLREPPPPLTEAELRSLLEEGRACMLILGGELHRLERCLAVLDADPEPSFSALTDAFRRVNEFRTHVEELGALLSALEARAHEVRSSWRRQVVDRA*
INPhiseqgaiiFebDRAFT_1002350462	3300000364	Soil	TQVSRLSTVADRLRSETVMAEPWLELDAVLRERLRDVLQEPPRPLTESELRSLLEEGRACMLILRAELDRLERRLAQLDGDPNASFSALTDAFRRVNEFRAHVEELRXLLAALETRAHEVRASWQRQIVDRA*
F12B_117672401	3300000443	Soil	MAEPWLELDAVLRVRLRDVLREPHPPLTEAELRSLLEEGRACMLILGGELHRLERRLAVLDADPEPSFSALTQAFRRVNEFREHVEELGALLSSLEARAHEVRSSWRRQIVDRA*
F24TB_103034022	3300000550	Soil	LQEVLREPPPPLTETELRSLLEEGHACLLILGGELARLERRLAQLDSDPDTSFSALTDAFRRANEFRAHVDELRELLSALELRAREVRAAWQRQVVGPA*
JGI10216J12902_1082055603	3300000956	Soil	MAGGPWLELDAVLRERLRDALREPPRPLTEAELRSLLDEGRACMLILGGELRRLERRLAKLDRDPEASFSEITDAFRRVSELRTHVEELGVLLGTLKTRAQEVRSSWRRQFVDL*
JGI10216J12902_1132818792	3300000956	Soil	MAEPWLELDTVLRERLHDVLQEPSRPLTEAELRKLLEEGRACMLILGGELHRLERRLAVLDTDPEPSFSALTEAFRRVHAFRTHIEELGALLSALETRAHEVRASWRRQVVDRPEPTSRAR*
JGI10216J12902_1216703652	3300000956	Soil	RLASEAVAEPWLELDAVLRGRLREVLREPPPPLTESELRSLLEEGRACMLILSGELDRLERRLAQLDADPQASFSAITDAFRRVNEFRAHVDELRALLAALEARAHEVRSSWRRQVADRD
Ga0062593_1019252551	3300004114	Soil	MAEPWLELDAVLRGRLREALREPPPPLTESELRSLLEEGRACMLILGGELGRLEGRLAQLDADPQASFSAITDAFRRVNDLRAHVEELRALLAALETRAHEVRSSWRRQIVDRV*
Ga0062592_1015688571	3300004480	Soil	MAERWLELDAVLRERLRDVLQEPPRPVTESELRSLLEEGRACMLILRAELDRLERRLAQLDGDPDTSFSALTDAFRRVNEFRAHVEELRALLAALETRAHEVRASWQRQIVDRA*
Ga0066814_100018604	3300005162	Soil	RERLRDVLREPPRPLTEAELRGLLEEGRACMLILSGELDRLERRLAQLDADPRASFSALTDAFRRVNELRAHVEELAVLLTALEGRAREVRASWQRQIVDRGKPN*
Ga0066674_100351512	3300005166	Soil	MAEPWLELDAVLRGRLREVLREPPPPLTEAELRSLLEEGRACRLILGGELDRLEGRLGKLDAEPEASFSELTDAFRRVNEFRAHVEGLDALLSALETRAHEVRTTRLRVQTTPPPS*
Ga0066673_105986791	3300005175	Soil	MAEPWLELDAVLRGRLREVLREPPPPLPGAELRSLLEEGRACRLILGGELDRLEGRLGKLDAEPEASFSELTDAFRRVNEFRAHVEGLDALLSALETRAHEVRTTRLRVQTTPPPS*
Ga0070676_108356491	3300005328	Miscanthus Rhizosphere	MAESWLELDAVLRERLREVLQEPPRPVTESELRSLLEEGRACMLILRGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAGLEKRAHEVRASWQRQIVDRA*
Ga0070683_1000058717	3300005329	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLHDPPRPVTESELRSLLEEGRACTLILNGELERLEGRLAQLDGDPNTSFSALTDALRRATELRAHMEELRALLVALEARAREVRATWQRQIVERA*
Ga0070683_1003482081	3300005329	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLQDPPRPVTESELRNLLEEGCACVLILTGELDRLEARLAQLDSDPTTSFSALTDVLRRVTELRRHVDELRALLGALETRAREVRATWQRQVVERA*
Ga0070661_1017634041	3300005344	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLHDPPRPVTESELRSLLEEGRACTLILNGELERVEARLAQLDGDPNTSFSALTDALRRATELRTHVEELRALLVALEARAREVRATWQRQIVERA*
Ga0073909_100755882	3300005526	Surface Soil	MAEPWLELDAVLRERLRDVLREPPRPLTEAELRGLLEESRACMLILSGELDRLERRLAQLDADPRASFSALTDAFRRVNELRAHVEELAVLLTALEGRAREVRAVWQRQIVDRGKPD*
Ga0070684_1000023783	3300005535	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLHDPPRPVTESELRSLLEEGRACTLILKGELERLEGRLAQLDGDPNTSFSALTDALRRATELRTHVEELRALLVALEARAREVRATWQRQIVERA*
Ga0070684_1006022542	3300005535	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLQDPPPPVTESELRNLLEEGCACVLILTGELDRLEARLAQLDSDPTTSFSALTDVLRRVTELRRHVDELRALLSALETRAREVRATWQRQVVERA*
Ga0070704_1001461063	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAQSWLELDAVLRERLREVLQEPPRPVTESELRSLLEEGRACMLILRGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAGLEKRAHEVRASWQRQIVDRA*
Ga0066698_101430741	3300005558	Soil	EPWLELDAVLRGRLREVLREPPPPLTEAELRSLLEEGRACRLILGGELDRLEGRLGKLDAEPEASFSELTDAFRRVNEFRAHVEGLDALLSALETRAHEVRTTRLRVQTTPPPS*
Ga0070664_1000088059	3300005564	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLHDPPRPVTESELRSLLEEGRACTLILNGELERVEARLAQLDGDPNTSFSALTDALRRATELRAHVEELRALLVALEARAREVRATWQRQIVERA*
Ga0068857_1010208282	3300005577	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLQDPPRPVTESELRNLLEEGCACVLILTGELDRLEARLAQLDSDPTTSFSALTDVLRRVTELRRHVDELRALLSALETRAREVRATWQRQVVERA*
Ga0066905_1000081712	3300005713	Tropical Forest Soil	MVGGPWLELDAVLRERLRDALADPPRPLTEAELRSLRDEGRACTLILGGELRRLERRLAKLDTDPEASFSELTDAFRRVSELRAHVEGLAALLASLETRAHEVRATWREQYVDQA*
Ga0066905_1001823732	3300005713	Tropical Forest Soil	MVGGPWLELDAVLRVRLHEALQEPPRPLTEAELRGLLDEGRACMLILGGELRRLERRLAKLDSVPDASFSEITDAFRRVSELRTHVEELGALLAALRTRAHEVRATWRRQYVDPGVGPTQLGRS*
Ga0066905_1004913182	3300005713	Tropical Forest Soil	MGGPWLELDAVLRERVHDVLQKPSRPVTESELRSLLDEGRACMLILRGELERLEGRLAQLDADPNTSFSALTDAFRGVNEFRTHVAELRVILAAVETRAREVHATWQRQFADHA*
Ga0066903_1073009301	3300005764	Tropical Forest Soil	LREVLGEPPPPLTETELRSLLEEGRACMLILGGELDRLEGRLAQLDADPNTSFSALTDALRRATELRAHVEELRALLAALEARAREVRAAWQRQVVGPDLT*
Ga0081540_100068718	3300005983	Tabebuia Heterophylla Rhizosphere	MAEPWLELDAVLRGRLREVLREPPPPLTETELRSLLEEGRACMLILGGELDRLEGRLAQLDVDPNTSFSALTDALRRATELRTHVEELRALLAALESRAREVRAAWQRQVARPGLT*
Ga0074051_114163402	3300006572	Soil	MELDAVLRERSRDVLREPPRPVTEAELRSLLEEGRACMLILSGELDRLERRLAELDADPHASFSAITDAFRRVNEFRAHVEELRELLSALESRAREVRAAWQRQVVDRA*
Ga0074055_118224031	3300006573	Soil	TVMAERWLELDAVLRERLRDVLREPPRPVTEAELRSLLEEGRACMLILSGELDRLERRLAELDADPHASFSAITDAFRRVSEFRTHVEGLRDLLSALESRAREVRAAWQRQVVDRA*
Ga0074056_117191982	3300006574	Soil	RERLRDVLREPPRPVTEAELRSLLEEGRACMLILSAELDRLEGRLAELDGDPHVSFSAITDAFRRVSEFRTHVEGLRDLLSALESRAREVRAAWQRQVTDRA*
Ga0074056_118188263	3300006574	Soil	WLELDAALRERLRDVLREPPRPLTEAELRGLLEEGRACMLILSGELDRLERRLAQLDADPQASFSALTDAFRRVNELRAHVEELAVLLTALEGRAREVRAVWQRQIVDRGKPD*
Ga0074053_119810253	3300006575	Soil	MAEPWLELDAVLRERLRDVLREPPRPLTEAELRGLLEESRACMLILSGELDRLERRLAQLDADPRASFSALTDAFRRVNELRAHVEELAVLLTALEGRAREVRASWQRQIVDRGKPN*
Ga0074047_120631472	3300006576	Soil	MAERWLELDAVLRERLRDVLREPPRPVTEAELRSLLEEGRACMLILSGELDRLERRLAELDADPHASFSAITDAFRRVNEFRAHVEELRELLSALESRAREVRAAWQRQVVDRA*
Ga0074050_100069024	3300006577	Soil	PSDTVMAERWLELDAVLRERLRDVLREPPRPVTEAELRSLLEEGRACMLILSGELDRLERRLAELDADPHASFSAITDAFRRVNEFRTHVEELRELLSALESRAREVRAAWQRQVVDRA*
Ga0074048_100594142	3300006581	Soil	MAERWLELDAVLRERLRDVLREPPRPVTEAELRSLLEEGRACMLILSGELDRLERRLAELDADPHASFSAITDAFRRVNEFRTHVEELRELLSALESRAREVRAAWQRQVVDRA*
Ga0074060_117299031	3300006604	Soil	MAERWLELDAVLRERLRDVLREPPRPVTEAELRSLLEEGRACMLILTAELDRLERRLAELDGDPHASFSAITDAFRRVSEFRTHVEGLRGLLSVLESRAREVRAAWQRQVVDRA*
Ga0074060_117927802	3300006604	Soil	MAEPWLELDAVLRERLRDVLQERPRPLTEAELRGLLEEGRACMLILSGELDRLERRLAQLDADPRASFSALTDAFRRVNELRAHVEELAVLLTALEGRAREVRAVWQRQIVNRGKPD*
Ga0074057_100060652	3300006605	Soil	MAEPWLELDAALRERLRDVLREPPRPLTEAELRGLLEEGRACMLILSGELDRLERRLAQLDADPRASFSALTDAFRRVNELRAHVEELAVLLTALEGRAREVRAVWQRQIVDRGKPD*
Ga0074057_100177761	3300006605	Soil	AERWMELDAVLRERSRDVLREPPRPVTEAELRSLLEEGRACMLILSGELDRLERRLAELDADPHASFSAITDAFRRVNDFRAHVEELRALLSALESRAREVRAAWQRQVVDRA*
Ga0075433_107268582	3300006852	Populus Rhizosphere	MAEPWLELDALLRERLRDVLQEPPRPLTESELRSLLEEGRACMLILSGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAALETRAHEVRASWQRQIVDRA*
Ga0074063_141135091	3300006953	Soil	MAERWLELDAVLRERLHDVLREPPRPVTEAELRSLLEEGRACMLILSAELDRLEGRLAELDGDPHASFSAITDAFRRVSEFRKHVEGLRDLLSALESRAREVRAAWQRQVVDRA*
Ga0074063_142826841	3300006953	Soil	ERLRDVLREPPRPLTEAELRGLLEEGRACMLILSGELDRLERRLAQLDADPQPSFSALTDAFRRVNELRSHVEELAALLTALETRAREVRASWQRQIVDRGKPN*
Ga0105243_100516693	3300009148	Miscanthus Rhizosphere	MAESWLELDAVLRERLREVLQEPPRPVTESELRSLLEEGRACMLILRAELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAGLEKRAHEVRASWQRQIVDRA*
Ga0075423_109723141	3300009162	Populus Rhizosphere	MAEPWLELDALLRERLRDVLQEPPPPLTESELRSLLEEGRACMLILSGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAALETRAHEVRASWQRQIVDRA*
Ga0105242_116378752	3300009176	Miscanthus Rhizosphere	QVARLSTVADPLRSETVMAESWLELDAVLRERLREVLQEPPRPVTESELRSLLEEGRACMLILRGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAGLEKRAHEVRASWQRQIVDRA*
Ga0126382_119598832	3300010047	Tropical Forest Soil	RERLRDVLREPPRPVTESELRSLLEDGRACMLIMRGELDRLEGRLAQLDGDPNTSFSALTDALRHVTELRAHVEGLAALLGALETRAHEVRATWQRQFVERA*
Ga0127503_109073962	3300010154	Soil	AVLRERLRDVLQEPTRPVTESEWRSLLEEGRACMLILSGELDRLERRLAQLDGDPNTSFSALTDAFRRVNGFRAHVEELRALLAALETRAHEVRASWQRHIVDRA*
Ga0126370_106309032	3300010358	Tropical Forest Soil	MAEPWLELDAVLRGRLREVLGEPPPPLTETELRSLLEEGRACMLILGGELGRLEGRLAQLDADPNTSFSALTDALRRATELRAHVEQLRALLSALELRARDVRASWRRQVVDRG*
Ga0126377_100309371	3300010362	Tropical Forest Soil	RLREVLGEPPPPLTESELRSLLEEGRACMLILGGELDRLEGRLAQLDADPNTSFSALTDALRRATELRTHVEELRALLTALETRAREVRAAWQRQVAGPGLA*
Ga0151489_14874441	3300011106	Soil	MAEPWLELDAVLRERLRDVLQERPRPLTEAELRGLLEEGRACMLILSGELDRLERRLAQLDADPQASFSALTDAFRRVNELRAHVEELAVLLTALETRAREVRAVWQRQIVDRGKPN*
Ga0137364_100367983	3300012198	Vadose Zone Soil	MAEPWLELDAVLRERLHDVLQAPPRPLTESELRSLLEEGRACMLILSGELDRLERRLAQLDGDPDTSFSALTDAFRRVNEFRPHVEELRTLLAALEARAREVRASWQRQIVDRA*
Ga0137382_100100183	3300012200	Vadose Zone Soil	MAEPWLELDAVLRERLHDVLQAPPRPLTESELRSLLEEGRACMLILSGELDRLERRLAQLDGDPDTSFSALTDAFRRVNEFRAHVEELRALLAALETRAREVRASWQRQIVDRA*
Ga0137376_100286005	3300012208	Vadose Zone Soil	MAEPWLELDAVLRERLHDVLQAPPRPLTESELRSLVEEGRACMLILSGELDRLERRLAQLDGDPDTSFSALTDAFRRVNEFRPHVEELRTLLAALEARAREVRASWQRQIVDRA*
Ga0137368_104687002	3300012358	Vadose Zone Soil	MAEPWLELDAVLRGRLREVLREPPPPLTEAELRGLLEKGRACMLILGGELDRLERRLAVLDADPEASFSALTEAFRRVNQFRAHVEELRALLSALETRAHEVRASWRRQVVDRA*
Ga0164301_106933761	3300012960	Soil	MAERWLELDAVLREHLRDVLREPPRPVTEAELRSLLEEGRACMLILSAELDRLQGRLAELDGDPHASFSAITDAFRRVSEFRTHVEGLRDLLSALESRAREVRAAWQRQVVDR
Ga0164307_102564882	3300012987	Soil	MAERWLELDAVLREHLRDVLREPPRPVTEAELRSLLEEGRACMLILSAELDRLEGRLAELDGDPQASFSAITDAFRRVSEFRTHVEGLRDLLSALESRAREVRAAWQRQVVDRA*
Ga0132258_104557094	3300015371	Arabidopsis Rhizosphere	VAEPWLELDAVLRERLRDVLQEPPRPVTETELRSLLEDGRACMLILRGELDRLEGRLAQLDGDPNTSFSALTDALRHVTELRAHVEGLAVLLGGLETRAREVRATWQRQIVERA*
Ga0132256_1000076757	3300015372	Arabidopsis Rhizosphere	VAEPWLELDAVLRERLRDVLQEPPRPVTETELRSLLEDGRACMLILRGELDRLEGRLAQLDGDPNTSFSALTDALRHVTELRAHVEGLAVLLAGLETRAREVRATWQRQIVERA*
Ga0132256_1000165784	3300015372	Arabidopsis Rhizosphere	MAGRWLELDVVLRERLRDVLREPPRPVTEAELRSLLEEGRACMLILSAELDRLEGRLAELDGDPQASFSEITDAFRRVSEFRTHVDGLRDLLSALDSRAREVRAAWQRQVVDRA*
Ga0132256_1010290692	3300015372	Arabidopsis Rhizosphere	MAEPWLELDAVLRGQLRDVLQDPPRPVTESELRKLLEDGRACILILGGELDRLEARLAQLDGDPNTSFSALTDALRRVTELRKHVDELRALLDALETRARTVRATWQRQIVERA*
Ga0134112_101734583	3300017656	Grasslands Soil	MAEPWLELDAVLRGRLREVLREPPPPLTEAELRSLLEEGRACRLILGGELDRLEGRLGKLDAEPEASFSELTDAFRRVNEFRAHVEGLDALLSALETRAHEVRTT
Ga0184608_101723122	3300018028	Groundwater Sediment	MAEPWLELDAVLKERLRDVLQEPPRPMTESELRGLLEEGRACMLILSGELDRLERRLAQLDGDPNTSFSALTDAFRRVNEFRAHVEELRTLLAALETRAREVRASWQRQIVDRA
Ga0184621_100225661	3300018054	Groundwater Sediment	MAEPWLELDAVLKERLRDVLQEPPRPMTESELRGLLEEGRACMLILSGELDRLERRLAQLDGDPDTSFSALTHAFRSVNELRAHVEELRALLAALDTRAHEV
Ga0184616_101193892	3300018055	Groundwater Sediment	MAEPWLELDAVLRERLRDVLQEPPRPLTETELRSLLEEGRACLLILSGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAALETRAREVRASWQRQIVDRG
Ga0184635_100241803	3300018072	Groundwater Sediment	MAEPWLELDAVLRERLRDVLQEPPRPLTESELRSLLEEGRACMLILKGELDRLERRLAQLDGDPDTSFSALTHAFRSVNELRAHVEELRTLLAALETRAREVRASWQQQIVDRA
Ga0184624_101236332	3300018073	Groundwater Sediment	MAEPWLELDAVLREQLRDVLQEPPRPLTESELRSLLEDGRACMLILSGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAALETRAREVRASWQRQIVDRG
Ga0184625_103601111	3300018081	Groundwater Sediment	MAEPWLELDAVLREQLRDVLQEPPRPLTESELRSLLEDGRACMLILTGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAALETRAREVRASWQRQIVD
Ga0184628_101641301	3300018083	Groundwater Sediment	MAEPWLELDAALRERLRDVLQEPPRPLTETELRSLLEEGRACLLILSGELDRLERRLAQRDGDPDTSFSALTDAFRRVNELRTHVEELRALLAALETRAREVRASWQR
Ga0193696_10335413	3300020016	Soil	MAEPWLELDAVLKERLRDVLQEPPRPMTESELRGLLEEGRACMLILSGELDRLERRLAQRDGDPDTSFSALTDAFRRVNEFRAHVEELRVLLTALETRAREVRASWQRQIVDRG
Ga0210381_100227191	3300021078	Groundwater Sediment	MAEPWLELDAVLKERLRDVLQEPPRPMTESELRGLLEEGRACMLILSGELDRLERRLAQLDGDPNTSFSALTDAFRRVNEFRAHVEELRTLVAALETRAREVR
Ga0222621_10364021	3300021510	Groundwater Sediment	MAEPWLELDAVLKERLRDVLQEPPRPMTESELRGLLEEGRACMLILSGELDRLERRLAQRDGDPDTSFSALTDAFRRVNELRTHVEELRALLAALETRAREVRASWQRQIVDRG
Ga0222622_100866032	3300022756	Groundwater Sediment	MAEPWLELDAVLRERLRDVLQEPPRPLTESELRSLLEEGRACMLILKGELDRLERRLAQLDGDPNISFSALTDAFRRVNEFRAHVEELRALLAALEARAREVRASWQRQIVDRA
Ga0222622_102482041	3300022756	Groundwater Sediment	DAVLRERLRDVLQKPPRPLTESELRSLLEDGRACMLILSGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAALETRAREVRASWQRQIVDRG
Ga0222622_114717531	3300022756	Groundwater Sediment	YWYGAPAWRLGGLTNSGRTASTVADRLRSETVMAEPWLELDAVLRERLRDVLQEPPRPLTESELRSLLEEGRACLLILSGELDRLERRLAQLDGDPKTSFSALTDAFRRVNEFRAHVEELRTLVAALEARAREVRASWQRQIVDRA
Ga0207686_107192362	3300025934	Miscanthus Rhizosphere	QVARLSTVADPLRSETVMAESWLELDAVLRERLREVLQEPPRPVTESELRSLLEEGRACMLILRGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAGLEKRAHEVRASWQRQIVDRA
Ga0207709_101171273	3300025935	Miscanthus Rhizosphere	MAESWLELDAVLRERLREVLQEPPRPVTESELRSLLEEGRACMLILRGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAGLEKRAHEVRASWQRQIVDRA
Ga0207661_100194383	3300025944	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLHDPPRPVTESELRSLLEEGRACTLILKGELERLEGRLAQLDGDPNTSFSALTDALRRATELRTHVEELRALLVALEARAREVRATWQRQIVERA
Ga0207661_102021243	3300025944	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLQDPPRPVTESELRNLLEEGCACVLILTGELDRLEARLAQLDSDPTTSFSALTDVLRRVTELRRHVDELRALLGALETRAREVRATWQRQVVERA
Ga0207679_100077683	3300025945	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLHDPPRPVTESELRSLLEEGRACTLILNGELERVEARLAQLDGDPNTSFSALTDALRRATELRTHVEELRALLVALEARAREVRATWQRQIVERA
Ga0207702_101165591	3300026078	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLQDPPRPVTESELRNLLEEGCACVLILTGELDRLEARLAQLDSDPTTSFSALTDVLRRVTELRRHVDELRALLSALETRAREVRATWQRQVVERA
Ga0207674_100047505	3300026116	Corn Rhizosphere	MAEPWLELDAVLRGRLRDVLHDPPRPVTESELRSLLEEGRACTLILNGELERLEGRLAQLDGDPNTSFSALTDALRRATELRTHVEELRALLVALEARAREVRATWQRQIVERA
Ga0209266_10422352	3300026327	Soil	MAEPWLELDAVLRGRLREVLREPPPPLTEAELRSLLEEGRACRLILGGELDRLEGRLGKLDAEPEASFSELTDAFRRVNEFRAHVEGLDALLSALETRAHEVRTTRLRVQTTPPPS
Ga0209811_100607083	3300027821	Surface Soil	MAEPWLELDAVLRERLRDVLREPPRPLTEAELRGLLEESRACMLILSGELDRLERRLAQLDADPRASFSALTDAFRRVNELRAHVEELAVLLTALEGRAREVRAVWQRQIVNRGKPD
Ga0307291_10285801	3300028707	Soil	MAEPWLELDAVLKERLRDVLQEPPRPMTESELRGLLEEGRACMLILSGELDRLERRLAQRDGDPDTSFSALTDAFRGVNELRTHVEELRALLAALETRAHEVRASWQRQIVDRA
Ga0307295_100048352	3300028708	Soil	MAEPWLELDAVLRERLRDVLQEPPRPLTESELRGLLEEGRACLLILSGELDRLEQRLAQLDGDPNTSFSALTDAFRRVNEFRAHVEELRTLVAALETRAREVRASWQRQIVDRA
Ga0307293_100047356	3300028711	Soil	MAEPWLELDAVLKERLRDVLQEPPRPMTESELRGLLEEGRACMLILSGELDRLERRLAQRDGDPDTSFSALTDAFRGVNELRTHVEELRALLAALDTRAHEVRASWQRQIVDRA
Ga0307317_100332953	3300028720	Soil	MAEPWLELDAVLKERLRDVLQEPPRPMTESELRGLLEEGRACMLILSGELDRLERRLAQRDGDPDTSFSALTDAFRGVNELRTHVEELRALLAALDTRAHEV
Ga0307280_101336661	3300028768	Soil	MAEPWLELDAVLRERLRDVLQEPPRPLTESELRGLLEEGRACLLILSGELDRLEQRLAQLDGDPNTSFSALTDAFRRVNEFRAHVEELRTLVAALETRAREV
Ga0307323_100399123	3300028787	Soil	MAEPWLELDAVLKERLRDVLQEPPRQMTESELRGLLEEGRACMLILSGELDRLERRLAQRDGDPDTSFSALTDAFRGVNELRTHVEELRALLAALDTRAHEVRASWQRQIVDRA
Ga0307323_103856121	3300028787	Soil	MAEPWLELDAVLRERLRDVLQEPPRPLTESELRGLLEEGRACLLILSGELDRLEQRLAQLDGDPNTSFSALTDAFRRVNEFRAHVEELRTLVAALETRAREVRASWQRQIV
Ga0307290_100269204	3300028791	Soil	MAEPWLELDAVLKERLRDVLQEPPRPMTESELRGLLEEGRACMLILSGELDRLERRLAQLDDDPNTSFSALTDAFRRAKELRAHVEELRTLLAALETRAREVRASWQ
Ga0307290_102369592	3300028791	Soil	MAEPWLELDAVLRERLRDVLQEPPRPVTEAELRSLLEEGRACLLILSGELDRLERRLAQLDGDPDTSFSALTDAFRGVNELRTHVEELRALLAALDTRAHEVRASWQRQIVDRA
Ga0307287_102533302	3300028796	Soil	MAEPWLELDAVLRERLRDVLQEPPRPLTESELRSLLEEGRACMLILKGELDRLERRLAQLDGDPNISFSALTDAFRRVNEFRAHVEELRTLLAALETRAREVRASWQRQIVDRA
Ga0307284_100075604	3300028799	Soil	MAEPWLELDGVLKERLRDVLQEPPRPMTESELRGLLEEGRACMLILSGELDRLERRLAQRDGDPDTSFSALTDAFRGANELRTHVEELRALLAALDTRAHEVRASWQRQIVDRA
Ga0307503_107537571	3300028802	Soil	MAEPWLELDAVLRERLRDVLQEPPRPLTETELRSLLEEGRACLLILSGELDRLERRLAQLDSDPNTSFSALTDAFRSVNEFRAHIEELRVLLAALETRA
Ga0307281_101477011	3300028803	Soil	LRDVLQEPPRPLTESELRSLLEDGRACMLILSGELDRLERRLAQLDGDPDTSFSALTDAFRRVNELRTHVEELRALLAALETRAREVRASWQRQIVDRG
Ga0307305_102078892	3300028807	Soil	MAEPWLELDAVLRGRLREVLREPPPPVTEAELRSLLEEGRACMLILGGELHRLERRLAVLDTDPEPSFSALTEAFRRVHAFRAHVEELGALLSALESRAHEVRASWRRQVVDRAAPTSRA
Ga0307292_102676521	3300028811	Soil	MAEPWLELDAVLRERLRDVLREPPRPVTESELRSLLDEGQACLLILRGELDRLERRLAQLDGDPDTSFSALTDAFRRANEFRAHVEELRVLLAALKTRAREVRASWQRQIVDRA
Ga0307296_107770252	3300028819	Soil	MAEPWLELDAVLRERLRDVLQEPPRPVTEAELRSLLEEGRACLLILSGELDRLERRLAQLDGDPDTSFSALTHAFRSVNELRAHVEELRALLAALDTRAHEVRASWQRQIVDRA
Ga0307289_102317802	3300028875	Soil	DPLRSETVMAEPWLELDAVLRERLRDVLQEPPRPLTESELRSLLEEGRACMLILKGELDRLERRLAQLDGDPNISFSALTDAFRRVNEFRAHVEELRTLLAALETRAREVRASWQRQIVDRA
Ga0307278_101479882	3300028878	Soil	MAEPWLELDAVLRGRLREVLREPPPPLTEAELRSLLEEGRAYMLILGGELHRLERRLAVLDADPEPSFSALTHAFRRVNEFRAHVEELGTLLSASEARAHEVRSSWRRQVVDRA
Ga0308202_10033213	3300030902	Soil	MAEPWLELDAVLKERLRDVLQEPPRPLTESELRGLLEEGRACLLILSGELDRLERRLAQLDDDPNTSFSALTDAFRRAKELRAHVEELRTLLAALETRAREVR
Ga0307498_100010171	3300031170	Soil	MAEPWLELDAVLRERLRDVLQEPPRPLTESELRSLLEEGRACMLILSGELDRLERRLEQLDGDPDISFSALTDAFRRVNEFRAHVEELRALLTALETRAREVR
Ga0307495_101048241	3300031199	Soil	MAEPWLELDAVLRERLHDVLQAPPRPLTESELRSLLEEGRACMLILSGELDRLERRLAQLDGDPDISFSALTDAFRRVNEFRPHVEELRTLLAALEARAREVRASWQRQIVDRA
Ga0307497_102374312	3300031226	Soil	MAEPWLELDAVLRERLRDVLREPPRPVTEMELRSLLEEGRACILILRGELDRLDRRLAQLDGDPDTSFSALTDAFRRVKELRAHVEELGALLTGLETRAREAHAAWQRQIVDRA
Ga0307468_1004904202	3300031740	Hardwood Forest Soil	MAEPWLELDAVLRERLREVLQEPPRRLTETELRSLLEEGRACMLILSGELDRLERRLAHLDRDPDTSFSALTDAFRRVNEFRTHVEELRVLLAALETRAREVRASWQRQIVDRA
Ga0310906_112182072	3300032013	Soil	MAGRWLELDVVLRERLRDVLREPPRPVTEAELRSLLEEGRACMLILSAELDRLEGRLAELDGDPQASFSEITDAFRRVSEFRTHVDGLRDLLSALDSRAREVRAAWQRQVVDRA
Ga0247829_113238242	3300033550	Soil	MAEPWLELDAVLRGRLKEVLREPPPPLTEAELRSLLEEGRACMLILGGELHRLERRLAVLDTDPEPSFSALTEAFRRVHAFRAHIEELGALLSALETRAHEVRASWRQQVVDRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087169

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences