NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087167

Metagenome / Metatranscriptome Family F087167

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087167
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 79 residues
Representative Sequence VLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Number of Associated Samples 99
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.82 %
% of genes near scaffold ends (potentially truncated) 39.09 %
% of genes from short scaffolds (< 2000 bps) 89.09 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (80.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(16.364 % of family members)
Environment Ontology (ENVO) Unclassified
(39.091 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.727 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 3.95%    β-sheet: 31.58%    Coil/Unstructured: 64.47%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF09361Phasin_2 64.55
PF08379Bact_transglu_N 4.55
PF01841Transglut_core 1.82
PF04055Radical_SAM 0.91
PF04679DNA_ligase_A_C 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG1305Transglutaminase-like enzyme, putative cysteine proteasePosttranslational modification, protein turnover, chaperones [O] 4.55
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 0.91

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.00 %
UnclassifiedrootN/A20.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000041|ARcpr5oldR_c004759All Organisms → cellular organisms → Bacteria → Proteobacteria1171Open in IMG/M
3300001990|JGI24737J22298_10195806Not Available596Open in IMG/M
3300004114|Ga0062593_101406155All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300004463|Ga0063356_105498764Not Available544Open in IMG/M
3300004479|Ga0062595_100708349All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300004481|Ga0069718_15262502All Organisms → cellular organisms → Bacteria → Proteobacteria770Open in IMG/M
3300004803|Ga0058862_11277129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium729Open in IMG/M
3300005334|Ga0068869_100569399All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans954Open in IMG/M
3300005335|Ga0070666_10214915All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1355Open in IMG/M
3300005338|Ga0068868_100241895All Organisms → cellular organisms → Bacteria → Proteobacteria1517Open in IMG/M
3300005340|Ga0070689_100197182All Organisms → cellular organisms → Bacteria → Proteobacteria1642Open in IMG/M
3300005354|Ga0070675_100330714All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1348Open in IMG/M
3300005356|Ga0070674_101474159All Organisms → cellular organisms → Bacteria → Proteobacteria611Open in IMG/M
3300005356|Ga0070674_102127410All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300005364|Ga0070673_100558248All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300005365|Ga0070688_100318364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1130Open in IMG/M
3300005367|Ga0070667_101241411All Organisms → cellular organisms → Bacteria → Proteobacteria698Open in IMG/M
3300005367|Ga0070667_101444949All Organisms → cellular organisms → Bacteria → Proteobacteria645Open in IMG/M
3300005440|Ga0070705_101006647All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300005444|Ga0070694_100075475All Organisms → cellular organisms → Bacteria → Proteobacteria2332Open in IMG/M
3300005536|Ga0070697_100321365All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1333Open in IMG/M
3300005544|Ga0070686_100725066All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300005544|Ga0070686_101638476Not Available545Open in IMG/M
3300005614|Ga0068856_100844355All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans935Open in IMG/M
3300005719|Ga0068861_100013842All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae5653Open in IMG/M
3300005842|Ga0068858_100627231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1044Open in IMG/M
3300005842|Ga0068858_100944640All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300005843|Ga0068860_101024883All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300005844|Ga0068862_100185553All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1869Open in IMG/M
3300006573|Ga0074055_11460136Not Available513Open in IMG/M
3300006881|Ga0068865_100528143All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300009081|Ga0105098_10209858All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium903Open in IMG/M
3300009094|Ga0111539_10429841All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1538Open in IMG/M
3300009094|Ga0111539_12389174Not Available613Open in IMG/M
3300009098|Ga0105245_10218311All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1838Open in IMG/M
3300009101|Ga0105247_10031881All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3200Open in IMG/M
3300009146|Ga0105091_10120363All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1216Open in IMG/M
3300009156|Ga0111538_10474622All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1586Open in IMG/M
3300009174|Ga0105241_11202154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium718Open in IMG/M
3300009177|Ga0105248_12412636Not Available599Open in IMG/M
3300009553|Ga0105249_10262756All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1716Open in IMG/M
3300009553|Ga0105249_12483530All Organisms → cellular organisms → Bacteria → Proteobacteria591Open in IMG/M
3300010373|Ga0134128_10363312All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1617Open in IMG/M
3300010396|Ga0134126_10012041All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales10924Open in IMG/M
3300010397|Ga0134124_11144882All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium796Open in IMG/M
3300010400|Ga0134122_10084885All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium2484Open in IMG/M
3300012491|Ga0157329_1027883Not Available571Open in IMG/M
3300012510|Ga0157316_1008719Not Available894Open in IMG/M
3300012957|Ga0164303_10150140All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1232Open in IMG/M
3300012958|Ga0164299_11678404All Organisms → cellular organisms → Bacteria → Proteobacteria503Open in IMG/M
3300012961|Ga0164302_10695596Not Available752Open in IMG/M
3300012986|Ga0164304_11356979Not Available582Open in IMG/M
3300012989|Ga0164305_10641148All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales860Open in IMG/M
3300013105|Ga0157369_10857050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans932Open in IMG/M
3300013297|Ga0157378_10154272All Organisms → cellular organisms → Bacteria → Proteobacteria2142Open in IMG/M
3300013297|Ga0157378_10215542All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1823Open in IMG/M
3300013308|Ga0157375_10723828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1148Open in IMG/M
3300014745|Ga0157377_10683736All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium743Open in IMG/M
3300014969|Ga0157376_12653295Not Available541Open in IMG/M
3300015372|Ga0132256_100030298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi4891Open in IMG/M
3300015373|Ga0132257_100060402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4254Open in IMG/M
3300018028|Ga0184608_10030503All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2027Open in IMG/M
3300018076|Ga0184609_10074165All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1494Open in IMG/M
3300018081|Ga0184625_10018021Not Available3344Open in IMG/M
3300021078|Ga0210381_10320809Not Available562Open in IMG/M
3300022756|Ga0222622_10860762All Organisms → cellular organisms → Bacteria → Proteobacteria664Open in IMG/M
3300023261|Ga0247796_1045857All Organisms → cellular organisms → Bacteria → Proteobacteria749Open in IMG/M
3300025325|Ga0209341_10492116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium979Open in IMG/M
3300025926|Ga0207659_11758799Not Available527Open in IMG/M
3300025933|Ga0207706_10242264All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1576Open in IMG/M
3300025935|Ga0207709_11014441Not Available679Open in IMG/M
3300025937|Ga0207669_11399158Not Available595Open in IMG/M
3300025938|Ga0207704_11147470All Organisms → cellular organisms → Bacteria → Proteobacteria661Open in IMG/M
3300025938|Ga0207704_11368684Not Available606Open in IMG/M
3300025942|Ga0207689_10231559All Organisms → cellular organisms → Bacteria → Proteobacteria1527Open in IMG/M
3300025961|Ga0207712_11700256Not Available566Open in IMG/M
3300025972|Ga0207668_10253021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1432Open in IMG/M
3300025981|Ga0207640_11105671All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300026067|Ga0207678_10314118All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1347Open in IMG/M
3300026118|Ga0207675_100101990All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2704Open in IMG/M
3300027561|Ga0209887_1068226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium744Open in IMG/M
3300028587|Ga0247828_10310011All Organisms → cellular organisms → Bacteria → Proteobacteria874Open in IMG/M
3300028592|Ga0247822_10115959All Organisms → cellular organisms → Bacteria → Proteobacteria1943Open in IMG/M
3300028597|Ga0247820_10135703All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1525Open in IMG/M
3300028791|Ga0307290_10118018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium970Open in IMG/M
3300028793|Ga0307299_10382725Not Available527Open in IMG/M
3300028889|Ga0247827_10648645Not Available682Open in IMG/M
3300028889|Ga0247827_10878599Not Available600Open in IMG/M
3300030336|Ga0247826_11039793All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300031170|Ga0307498_10010707All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1835Open in IMG/M
3300031421|Ga0308194_10136170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium744Open in IMG/M
3300031538|Ga0310888_10099813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1474Open in IMG/M
3300031538|Ga0310888_10500556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium727Open in IMG/M
3300031562|Ga0310886_10038441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium2081Open in IMG/M
3300031720|Ga0307469_10576404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1001Open in IMG/M
3300031740|Ga0307468_100306715All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1156Open in IMG/M
3300031854|Ga0310904_10296103All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1023Open in IMG/M
3300031892|Ga0310893_10223426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium769Open in IMG/M
3300031908|Ga0310900_10103717All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1831Open in IMG/M
3300031940|Ga0310901_10212991All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium776Open in IMG/M
3300032003|Ga0310897_10060426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans1399Open in IMG/M
3300032003|Ga0310897_10423635All Organisms → cellular organisms → Bacteria → Proteobacteria634Open in IMG/M
3300032075|Ga0310890_10157073All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1511Open in IMG/M
3300032179|Ga0310889_10227781All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales874Open in IMG/M
3300032180|Ga0307471_100464822All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1407Open in IMG/M
3300034053|Ga0373890_047649All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium657Open in IMG/M
3300034192|Ga0373896_012665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium744Open in IMG/M
3300034419|Ga0373914_0052288All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300034668|Ga0314793_053942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium744Open in IMG/M
3300034692|Ga0373917_0055508Not Available613Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil16.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.18%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.45%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.45%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere4.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.55%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.55%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.64%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.64%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry3.64%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.73%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.73%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.73%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.82%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.82%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.82%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.82%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.91%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.91%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.91%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.91%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.91%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000041Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphereHost-AssociatedOpen in IMG/M
3300001990Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012491Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610Host-AssociatedOpen in IMG/M
3300012510Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610Host-AssociatedOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300023261Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6EnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027561Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300034053Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.3EngineeredOpen in IMG/M
3300034192Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.3EngineeredOpen in IMG/M
3300034419Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.3EngineeredOpen in IMG/M
3300034668Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034692Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3EngineeredOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ARcpr5oldR_00475923300000041Arabidopsis RhizosphereVIAALAVAAVTLPAFAQSSGYTISPAGPADARNNYVPQAGAVFVVDDARGAIIMCFPDNKDNKVVVVCTPATKLPQ*
JGI24737J22298_1019580623300001990Corn RhizosphereKVMRIGELAVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ*
Ga0062593_10140615523300004114SoilMRIGELAVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ*
Ga0063356_10549876413300004463Arabidopsis Thaliana RhizosphereMAVAGAALPASAESSGYTIAPAGPADPRNNYVPQSGAVFIVDNAKGVISMCFPDNKDNKVVVVCSPATKLP*
Ga0062595_10070834923300004479SoilMRTRNLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVMVVCTPANKLPQ*
Ga0069718_1526250223300004481SedimentLTASRVRRNLAAAALPVIAIVGATVPASAESSGYTVAPAGPGDPRYSYVAPVNAVFVVDNAKGQISLCYPDSKDNKAAVMCTPATKLPQ*
Ga0058862_1127712923300004803Host-AssociatedPRWLCAVTLPASAEPSGYTVAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0068869_10056939933300005334Miscanthus RhizosphereAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0070666_1021491533300005335Switchgrass RhizosphereMRTRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0068868_10024189523300005338Miscanthus RhizosphereMRTRNLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0070689_10019718233300005340Switchgrass RhizosphereVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGTIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0070675_10033071413300005354Miscanthus RhizosphereMRTRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVMVVCTPANKLPQ*
Ga0070674_10147415913300005356Miscanthus RhizosphereLPRWLCAVTLPASAEPSGYTVAPARPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCSPATKLP*
Ga0070674_10212741023300005356Miscanthus RhizosphereALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ*
Ga0070673_10055824823300005364Switchgrass RhizosphereMRTRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGTIIMCFPDNKDNKV
Ga0070688_10031836433300005365Switchgrass RhizosphereVAGAALPASAESSGYTIAPAGPADPRNNYVPQSGAVFIVDNAKGVISMCFPDNKDNKVMVVCTPANKLPQ*
Ga0070667_10124141113300005367Switchgrass RhizosphereMRTRNLGAAVLAALPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0070667_10144494913300005367Switchgrass RhizosphereMRIGELAVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSDVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ*
Ga0070705_10100664723300005440Corn, Switchgrass And Miscanthus RhizosphereTRNLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0070694_10007547533300005444Corn, Switchgrass And Miscanthus RhizosphereLPRWLCAVTLPASAEPSGYTVAPARPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0070697_10032136513300005536Corn, Switchgrass And Miscanthus RhizosphereAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0070686_10072506623300005544Switchgrass RhizosphereMRTRNLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCSPATKLP*
Ga0070686_10163847613300005544Switchgrass RhizosphereMRIGELAVGALAVMAIAGVTLPDSAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ*
Ga0068856_10084435513300005614Corn RhizosphereVAGAALPASAESSGYTIAPAGPADPRNNYVPQSGAVFIVDNAKGVISMCFPDNKDNKVVVVCTPATKLPQ*
Ga0068861_10001384263300005719Switchgrass RhizosphereMSCVSESPAALVAAIAGTAVPAFAQSSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVMVVCTPANKLPQ*
Ga0068858_10062723133300005842Switchgrass RhizosphereCAVTLPASAEPSGYTVAPARPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0068858_10094464013300005842Switchgrass RhizosphereMRIGELAVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICT
Ga0068860_10102488313300005843Switchgrass RhizosphereMRTRNLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0068862_10018555353300005844Switchgrass RhizosphereMSSTRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVMVVCTPANKLPQ*
Ga0074055_1146013613300006573SoilMRTRYLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0068865_10052814313300006881Miscanthus RhizosphereVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ*
Ga0105098_1020985813300009081Freshwater SedimentLAAMAVAWATVPALAESSGSTIGPADPRNNYVPQAGAVFVVDNAKGQISMCFPDNKDNKVVVICTPATKLP*
Ga0111539_1042984143300009094Populus RhizosphereAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ*
Ga0111539_1238917423300009094Populus RhizosphereVIAALAVAAVTLPAFAQSSGYTISPAGPADARNNYVPQAGAVFVVDDARGAIIMCFTDNKDNKVVVVSTPATKLPQ*
Ga0105245_1021831153300009098Miscanthus RhizosphereAVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ*
Ga0105247_1003188143300009101Switchgrass RhizosphereVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0105091_1012036323300009146Freshwater SedimentMRFRELAAAALAAMAVAWATVPALAESSGYTIGPADPRNNYVPQAGAVFVVDNAKGQISMCFPDNKDNKVVVICTPATKRP*
Ga0111538_1047462223300009156Populus RhizosphereMRFRELAAAALAAMVVAWATVPALAESSGYTIGPAGPRNNYVPQAGAVFVVDNAKGQISMCFPDNKDNKVVVICTPATKLP*
Ga0105241_1120215423300009174Corn RhizosphereVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0105248_1241263613300009177Switchgrass RhizosphereVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0105249_1026275653300009553Switchgrass RhizosphereVQQGRNVMRTRNLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0105249_1248353023300009553Switchgrass RhizosphereVLAALAVAAVTLPASAEPWGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPANKLPQ*
Ga0134128_1036331243300010373Terrestrial SoilVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVMVVCTPANKLPQ*
Ga0134126_1001204173300010396Terrestrial SoilVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGTIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0134124_1114488223300010397Terrestrial SoilLPRWLCAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMGFPDNKDNKVVVVCTPATKLPQ*
Ga0134122_1008488513300010400Terrestrial SoilLAVAAVTLPASAEPSGYTVAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKVPQ*
Ga0157329_102788323300012491Arabidopsis RhizosphereMRTRNLGAAVIAALAVAAVTLPAFAQSSGYTISPAGPADARNNYVPQAGAVFVVDDARGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0157316_100871913300012510Arabidopsis RhizosphereVIAALAVAAVTLPAFAQSSGYTISPADPADARNNYVPQAGAVFVVDDARGAIIMCFPDKKDNKVVVVCTPATKLPQ*
Ga0164303_1015014023300012957SoilLPRWLCAVTLPASAEPSGYTVAPAGPADPRNNYVPQAGAVFVVGDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0164299_1167840423300012958SoilMSAKNLAATALAVVAITGLALPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVDNAKGQISICYPDSKDNKVVVVG
Ga0164302_1069559613300012961SoilVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKV
Ga0164304_1135697923300012986SoilMSSTRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAIFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0164305_1064114823300012989SoilVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVMVVCTPANKLPQ*
Ga0157369_1085705033300013105Corn RhizosphereALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDANGAIIMCFPDNKDNKVMVVCTPANKLPQ*
Ga0157378_1015427213300013297Miscanthus RhizosphereMRTRNLGAAVFAACVVAAVSLLASAKPSVYTMALAVPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0157378_1021554243300013297Miscanthus RhizosphereAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGTIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0157375_1072382813300013308Miscanthus RhizosphereNCKNVQQWRNVMRTRNLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0157377_1068373613300014745Miscanthus RhizosphereALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGTIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0157376_1265329523300014969Miscanthus RhizosphereKVMRIGELAVGALAVMAIAGVTLPASAELSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ*
Ga0132256_10003029853300015372Arabidopsis RhizosphereMRTRKLGAAVIAALAVAAVTLPAFAQSSGYTISPAGPADARNNYVPQAGAVFVVDDARGAIIMCFPDNKDNKVVVVCTPATKLPQ*
Ga0132257_10006040243300015373Arabidopsis RhizosphereVIAALAVAAVTLPAFAQSSGYTISPAGPADARNNYVPQAGAVFVVDDARGAIIMCFRDNKDNKVVVVCTPATKLPQ*
Ga0184608_1003050333300018028Groundwater SedimentVQKTSPRRRSPSAITGLALPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVDNAKGQISMCYPDSKDNKVVVICTPATKLPQ
Ga0184609_1007416523300018076Groundwater SedimentMSAKNLAAAALAVVAITGLALPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVDNAKGQISMCYPDSKDNKVVVVCTPATKLPQ
Ga0184625_1001802143300018081Groundwater SedimentVITGLALPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVDNAKGQISMCYPDSKDNKVVVVCTPATKLPQ
Ga0210381_1032080923300021078Groundwater SedimentMSAKNLAAAALAVVAITGLALPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVDNAKGQISMCYPDSKDNKVVVICTPATKLPQ
Ga0222622_1086076223300022756Groundwater SedimentMSAKNFAAAALAVVAITGLALPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVDNAKGQISMCYPDSKDNKVVVVCTRRP
Ga0247796_104585713300023261SoilMRIGELAVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ
Ga0209341_1049211623300025325SoilMAVAGAALPASAESSGYTIAPAGPADPRNSYVPQSGAVFIVDNAKGAISMCFPDNKDNKVVVVCSPATKLP
Ga0207659_1175879923300025926Miscanthus RhizosphereNVMRTRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0207706_1024226413300025933Corn RhizosphereLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGTIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0207709_1101444123300025935Miscanthus RhizosphereMSSTRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0207669_1139915823300025937Miscanthus RhizosphereALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ
Ga0207704_1114747013300025938Miscanthus RhizosphereLPRWLCAVTLPASAEPSGYTVAPARPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVMVVCTPANKLPQ
Ga0207704_1136868413300025938Miscanthus RhizosphereVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ
Ga0207689_1023155933300025942Miscanthus RhizosphereMRIRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0207712_1170025623300025961Switchgrass RhizosphereMRTRNLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIVCFPDNKDNKVVVVCTPATKLPQ
Ga0207668_1025302143300025972Switchgrass RhizosphereMRTRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAISVCFPDNKDNKVVVVCSPATELP
Ga0207640_1110567123300025981Corn RhizosphereLPRWLCAVTLPASAEPSGYTVAPARPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0207678_1031411833300026067Corn RhizosphereLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVMVVCTPANKLPQ
Ga0207675_10010199033300026118Switchgrass RhizosphereVLAALAVAEVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0209887_106822613300027561Groundwater SandKNLSAAVLAVMVTTGLALPASAEASDYTMAPAGPVDPRNTFVAPVNSVFVVDNANGQISMCFPDNKDGKILVVCTPATKLPQ
Ga0247828_1031001123300028587SoilMSAKNLAAAALTVVAIIGLAPPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVGNAKGQISMCYPDSKDNKVVVVCTPATKLPQ
Ga0247822_1011595913300028592SoilLTASRVRRNLAAAALAVIAIVGATVPASAESSGYTVAPAGPGDPRYSYVAPVNAVFVVDNAKGQISLCYPDSKDNKAAVR
Ga0247820_1013570313300028597SoilMSAKNLAAAALAVVAIIGLAPPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVGNAKGQISMCYPDSKDNKVVVVCTPATKLPQ
Ga0307290_1011801813300028791SoilMSAKNFAAAALAVVAITGLALPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVDNAKGQISMCYPDSKDNKVVVICTPATKLPQ
Ga0307299_1038272523300028793SoilMRTRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0247827_1064864523300028889SoilMSAKNLAAAALTVVAIIGLAPPASAEVSGYTVAPAGPVDPRNSYVPPVNAGFVVGNAKGQISMCYPDSKDNKVVVVCTPATKLPQ
Ga0247827_1087859923300028889SoilLTASRVRRNLAAAALAVIAIVGATVPASAESSGYTVAPAGPGDPRYSYVAPVNAVFVVDNAKGQISLCYPDSKDNKAAVMCTPATKLPQ
Ga0247826_1103979323300030336SoilMRIGELAVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDSKDNKAAVMCTPATKLPQ
Ga0307498_1001070733300031170SoilMRTKNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0308194_1013617023300031421SoilAITGLALPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVDNAKGQISMCYPDSKDNKVVVICTPATKLPQ
Ga0310888_1009981343300031538SoilAVAGAALPASAESSGYTIAPAGPADPRNNYVPQSGAVFIVDNAKGVISMCFPNNKDNKVVVVCSPATKLP
Ga0310888_1050055613300031538SoilLAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0310886_1003844113300031562SoilMRIGELAVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYDAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ
Ga0307469_1057640413300031720Hardwood Forest SoilVQKTSALAVVALTGLALPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVGNAKGQISMCYPDSKDNKVVVVCTPATKLPQ
Ga0307468_10030671523300031740Hardwood Forest SoilMSAKNLAAAALAVVAITGLALPASAEVSGNSYVPPVNAVFVVDNAKGQISMCYPDSKDNKVVVVCTPATKLPQ
Ga0310904_1029610323300031854SoilMRTRNLGAAVLAALAVAAVTLPASAEPSGYTVAPARPADPRNNYVPQAGAVFVVDDARGAIIMCFRDIKDNKVVVVCTPATKLPQ
Ga0310893_1022342633300031892SoilAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0310900_1010371733300031908SoilMRTRNLGAAVLAALAVAAVTIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDARGAIIMCFRDNKDNK
Ga0310901_1021299113300031940SoilIPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDGAKGAIIMCFPDNKDNKVMVVCTPANKLPQ
Ga0310897_1006042613300032003SoilMRTRKLGAAVIAALAVAAVTLPAFAQSSGYTISPAGPADARNNYVPQAGAVFVVDDARGAIIMCFRDNKDNKVVVVCTPATKLPQ
Ga0310897_1042363523300032003SoilMRTRNLGAAVLAALAVAAVTLPASAEPSGYTIAPAGPADPRNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0310890_1015707313300032075SoilGELAVGALAVMAIAGVTLPASAESSGYTVAPAGPGDARNSYVAPVNAVFVVDNAKGQISLCYPDNKDNKVMVICTPATKLPQ
Ga0310889_1022778123300032179SoilMRTRNLGAAVLAALAVAAVTLPAFAQSSGYTISPAGPADARNNYVPQAGAVFVVDDAKGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0307471_10046482223300032180Hardwood Forest SoilMSAKNLAAAALAVVAIIGLAPPASAEVSGYTVAPAGPVDPRNSYVPPVNAVFVVDNAKGQISMCYPDSKDNKVVVVCTPATKLPQ
Ga0373890_047649_365_6283300034053Sediment SlurryMRFRELTAAALAAMVVAWATVPALAESSGYTIGPAGPADPRNNYVPQAGAVFVVDNAKGQISMCFPDNKDNKDNKVVVICTPATKLP
Ga0373896_012665_50_3043300034192Sediment SlurryMRFRELAAAALAAMVVAWATVPALAESSGYTIGPAGPADPRNNYVPQAGAVFVVDNAKGQISMCFPDNKDNKVVVICTPATKLP
Ga0373914_0052288_172_4293300034419Sediment SlurryMRTRNLGAAVIAALAVAAVTLPAFAQSSGYTISPAGPADARNNYVPQAGAVFVVDDARGAITMCFPDNKDNKVVVVCTPATKLPQ
Ga0314793_053942_1_1983300034668SoilLPAFAQSSGYTISPAGPADARNNYVPQAGAVFVVDDARGAIIMCFPDNKDNKVVVVCTPATKLPQ
Ga0373917_0055508_158_4213300034692Sediment SlurryMRFRELAAAALAAMVVAWATVPALAESSGYTIGPAGPADPRNNYVPQAGAVFVVDNAKGQISMCFPDNKDNKDNRVVVICTPATKLP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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