Metagenome / Metatranscriptome Family F087093

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087093
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	59 residues
Representative Sequence	MEGLFKSKRFWVAAAAIAVVVLKDKVPLSEDQIQVLVYTIGAWIVGESIRPVDPKPEVAK
Number of Associated Samples	76
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.55 %
% of genes near scaffold ends (potentially truncated)	35.45 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.727 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (27.273 % of family members)
Environment Ontology (ENVO)	Unclassified (52.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (52.727 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF05866	RusA	14.55
PF11753	DUF3310	4.55
PF00112	Peptidase_C1	3.64
PF15891	Nuc_deoxyri_tr2	1.82
PF00145	DNA_methylase	1.82
PF10520	Lipid_desat	0.91
PF13479	AAA_24	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	14.55
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	1.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
All Organisms	root	All Organisms	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
cellular organisms	root	All Organisms → cellular organisms	26.36 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	20.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	16.36 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.82 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	15.45 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	3.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.82 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	13.64 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	3.64 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.82 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	13.64 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	3.64 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	1.82 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Pirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula	9.09 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	3.64 %
Roseiconus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Roseiconus	1.82 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.82 %
Blastopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula	0.91 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
unclassified Pirellula	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula	9.09 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	3.64 %
Roseiconus lacunae	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Roseiconus → Roseiconus lacunae	1.82 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.82 %
unclassified Blastopirellula	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula	0.91 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.73 %
Pirellula sp. SH-Sr6A	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	9.09 %
Verrucomicrobia bacterium LW23	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	3.64 %
Roseiconus lacunae	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Roseiconus → Roseiconus lacunae	1.82 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.82 %
Blastopirellula sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula → Blastopirellula sp.	0.91 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352004\|2199822023	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	1412	Open in IMG/M
2199352004\|2199907851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	697	Open in IMG/M
3300002408\|B570J29032_109095047	Not Available	592	Open in IMG/M
3300002835\|B570J40625_100043409	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	6607	Open in IMG/M
3300005525\|Ga0068877_10016127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	5368	Open in IMG/M
3300005525\|Ga0068877_10256891	Not Available	1025	Open in IMG/M
3300005527\|Ga0068876_10127541	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Roseiconus → Roseiconus lacunae	1506	Open in IMG/M
3300005527\|Ga0068876_10219000	Not Available	1099	Open in IMG/M
3300005613\|Ga0074649_1061490	Not Available	1550	Open in IMG/M
3300005758\|Ga0078117_1017828	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	3965	Open in IMG/M
3300005805\|Ga0079957_1019232	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	4826	Open in IMG/M
3300005805\|Ga0079957_1259454	Not Available	802	Open in IMG/M
3300006641\|Ga0075471_10197240	Not Available	1050	Open in IMG/M
3300007177\|Ga0102978_1273852	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1124	Open in IMG/M
3300008107\|Ga0114340_1020572	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	5039	Open in IMG/M
3300008110\|Ga0114343_1081147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	1165	Open in IMG/M
3300008120\|Ga0114355_1119223	Not Available	997	Open in IMG/M
3300008266\|Ga0114363_1034772	All Organisms → cellular organisms → Bacteria	2550	Open in IMG/M
3300008266\|Ga0114363_1129381	Not Available	1486	Open in IMG/M
3300008448\|Ga0114876_1084141	All Organisms → Viruses → Predicted Viral	1312	Open in IMG/M
3300008448\|Ga0114876_1224532	Not Available	609	Open in IMG/M
3300008448\|Ga0114876_1253141	Not Available	544	Open in IMG/M
3300008450\|Ga0114880_1141602	Not Available	877	Open in IMG/M
3300008510\|Ga0110928_1125825	Not Available	589	Open in IMG/M
3300010354\|Ga0129333_10069218	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	3279	Open in IMG/M
3300010354\|Ga0129333_10261952	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → unclassified Blastopirellula → Blastopirellula sp.	1556	Open in IMG/M
3300010354\|Ga0129333_10330817	Not Available	1358	Open in IMG/M
3300010354\|Ga0129333_11060636	Not Available	678	Open in IMG/M
3300010354\|Ga0129333_11144751	Not Available	648	Open in IMG/M
3300010354\|Ga0129333_11194859	Not Available	632	Open in IMG/M
3300012702\|Ga0157596_1111128	Not Available	510	Open in IMG/M
3300012719\|Ga0157600_1178914	Not Available	621	Open in IMG/M
3300012781\|Ga0138286_1253651	Not Available	1361	Open in IMG/M
3300013004\|Ga0164293_10653861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	678	Open in IMG/M
3300013005\|Ga0164292_11001818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	521	Open in IMG/M
3300013372\|Ga0177922_10769606	Not Available	977	Open in IMG/M
3300016699\|Ga0180058_1148188	Not Available	641	Open in IMG/M
3300017747\|Ga0181352_1104095	Not Available	776	Open in IMG/M
3300020048\|Ga0207193_1244003	Not Available	1364	Open in IMG/M
3300020506\|Ga0208091_1011067	Not Available	1118	Open in IMG/M
3300020536\|Ga0207939_1032768	Not Available	675	Open in IMG/M
3300021141\|Ga0214163_1014232	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	2535	Open in IMG/M
3300021141\|Ga0214163_1020538	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	1991	Open in IMG/M
3300021141\|Ga0214163_1070237	Not Available	861	Open in IMG/M
3300021141\|Ga0214163_1138759	Not Available	532	Open in IMG/M
3300022179\|Ga0181353_1165170	Not Available	502	Open in IMG/M
3300022752\|Ga0214917_10077140	Not Available	2058	Open in IMG/M
3300022752\|Ga0214917_10214049	Not Available	935	Open in IMG/M
3300022752\|Ga0214917_10245444	Not Available	840	Open in IMG/M
3300024289\|Ga0255147_1093825	Not Available	555	Open in IMG/M
3300024351\|Ga0255141_1025084	Not Available	906	Open in IMG/M
3300024355\|Ga0255157_1027846	Not Available	967	Open in IMG/M
3300024481\|Ga0256330_1091506	Not Available	643	Open in IMG/M
3300024484\|Ga0256332_1097449	Not Available	628	Open in IMG/M
3300024484\|Ga0256332_1100768	Not Available	617	Open in IMG/M
3300024502\|Ga0255181_1044412	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	778	Open in IMG/M
3300024562\|Ga0256336_1122987	Not Available	554	Open in IMG/M
3300024574\|Ga0255275_1144346	Not Available	642	Open in IMG/M
3300025635\|Ga0208147_1067477	Not Available	896	Open in IMG/M
3300025848\|Ga0208005_1102007	Not Available	895	Open in IMG/M
3300026455\|Ga0255155_1015561	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	1388	Open in IMG/M
3300026457\|Ga0255160_1034224	Not Available	881	Open in IMG/M
3300026566\|Ga0256334_1114537	Not Available	613	Open in IMG/M
3300026572\|Ga0255270_1080519	Not Available	822	Open in IMG/M
3300027396\|Ga0255146_1099786	Not Available	596	Open in IMG/M
3300027769\|Ga0209770_10079359	Not Available	1368	Open in IMG/M
3300027793\|Ga0209972_10060924	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Roseiconus → Roseiconus lacunae	2012	Open in IMG/M
3300027805\|Ga0209229_10155678	Not Available	1029	Open in IMG/M
3300027806\|Ga0209985_10021688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	4003	Open in IMG/M
3300027816\|Ga0209990_10189949	Not Available	957	Open in IMG/M
3300029930\|Ga0119944_1000485	All Organisms → cellular organisms → Bacteria → Proteobacteria	7013	Open in IMG/M
3300029930\|Ga0119944_1007856	Not Available	1661	Open in IMG/M
3300029930\|Ga0119944_1037359	Not Available	609	Open in IMG/M
3300029933\|Ga0119945_1002666	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	2600	Open in IMG/M
3300029933\|Ga0119945_1020359	Not Available	795	Open in IMG/M
3300031758\|Ga0315907_10487313	Not Available	978	Open in IMG/M
3300031758\|Ga0315907_10774560	Not Available	720	Open in IMG/M
3300031784\|Ga0315899_11062262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium LW23	714	Open in IMG/M
3300031787\|Ga0315900_10004618	All Organisms → cellular organisms → Bacteria	19319	Open in IMG/M
3300031787\|Ga0315900_10102886	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	2774	Open in IMG/M
3300031857\|Ga0315909_10197969	Not Available	1595	Open in IMG/M
3300031857\|Ga0315909_10384425	Not Available	1012	Open in IMG/M
3300031857\|Ga0315909_10499536	Not Available	840	Open in IMG/M
3300031951\|Ga0315904_10073681	All Organisms → cellular organisms → Bacteria	3686	Open in IMG/M
3300031951\|Ga0315904_10643448	Not Available	903	Open in IMG/M
3300031951\|Ga0315904_10707147	Not Available	846	Open in IMG/M
3300031963\|Ga0315901_10934459	Not Available	613	Open in IMG/M
3300032116\|Ga0315903_10567877	Not Available	879	Open in IMG/M
3300033816\|Ga0334980_0029891	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	2324	Open in IMG/M
3300033816\|Ga0334980_0051805	Not Available	1734	Open in IMG/M
3300033979\|Ga0334978_0033128	Not Available	2709	Open in IMG/M
3300033979\|Ga0334978_0427449	Not Available	622	Open in IMG/M
3300033993\|Ga0334994_0365503	Not Available	709	Open in IMG/M
3300033994\|Ga0334996_0055886	Not Available	2428	Open in IMG/M
3300034012\|Ga0334986_0251153	Not Available	961	Open in IMG/M
3300034012\|Ga0334986_0499886	Not Available	598	Open in IMG/M
3300034061\|Ga0334987_0111690	Not Available	2078	Open in IMG/M
3300034061\|Ga0334987_0376724	Not Available	908	Open in IMG/M
3300034061\|Ga0334987_0566812	Not Available	677	Open in IMG/M
3300034062\|Ga0334995_0109326	Not Available	2076	Open in IMG/M
3300034092\|Ga0335010_0242647	Not Available	1068	Open in IMG/M
3300034094\|Ga0335014_0300366	Not Available	725	Open in IMG/M
3300034094\|Ga0335014_0519284	Not Available	501	Open in IMG/M
3300034106\|Ga0335036_0027672	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → unclassified Pirellula → Pirellula sp. SH-Sr6A	4488	Open in IMG/M
3300034108\|Ga0335050_0305027	Not Available	758	Open in IMG/M
3300034118\|Ga0335053_0828269	Not Available	509	Open in IMG/M
3300034279\|Ga0335052_0511456	Not Available	619	Open in IMG/M
3300034280\|Ga0334997_0128828	Not Available	1690	Open in IMG/M
3300034283\|Ga0335007_0599375	Not Available	638	Open in IMG/M
3300034283\|Ga0335007_0726641	Not Available	551	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.91%
Marine	Environmental → Aquatic → Marine	8.18%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.91%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	41.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	19.09%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	12.73%
River	Environmental → Aquatic → Freshwater → River	12.73%
Coastal	Environmental → Aquatic → Marine → Coastal	8.18%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	4.55%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	40.91%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	12.73%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	12.73%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	11.82%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.18%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	7.27%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	4.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.91%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.91%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	27.27%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	12.73%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	11.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.09%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	7.27%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.45%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.55%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.55%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	4.55%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.73%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.82%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.82%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.91%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.91%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	0.91%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.91%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.91%
Water Bodies	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Water Bodies	0.91%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352004	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300005758	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300007177	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface and Bottom layers) 16 sequencing projects	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300008510	Microbial Communities in Water bodies, Singapore - Site RA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300012702	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES114 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012719	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES123 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012781	Freshwater microbial communities from Lake Simoncouche, Canada - S_130712_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300016699	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES160 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020506	Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020536	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021141	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300024289	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h	Environmental	Open in IMG/M
3300024351	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_0h	Environmental	Open in IMG/M
3300024355	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8h	Environmental	Open in IMG/M
3300024481	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024484	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024502	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepC_8d	Environmental	Open in IMG/M
3300024562	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024574	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025848	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026455	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8h	Environmental	Open in IMG/M
3300026457	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepB_8h	Environmental	Open in IMG/M
3300026566	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026572	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027396	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_8h	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027806	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300029930	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727	Environmental	Open in IMG/M
3300029933	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental	Open in IMG/M
3300034094	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Sep2000-rr0077	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2199998065	2199352004	Freshwater	MQDLLKSKRFWAAAAVVAVIVLKDKVPLSEEQIQQLVLAVGAWIVGDSIRPLPKPDEVAK
2200088869	2199352004	Freshwater	MQDLLKSKRFWAAAAVVAVVVLKDKVPLSEEQIQQLVLAVGAWIVGDSIRPLPKPDEVAK
B570J29032_1090950472	3300002408	Freshwater	MLNDLIKSKRFWAAVAGIVVVVAKDRLPIALDEQQITMIVLAIGSWIVGDSLRATVVK*
B570J40625_1000434099	3300002835	Freshwater	MESLFKSKRFWVSLAAVAVVVLKDKVPLTEDQIQILVYAVGAWVVGESIRPVDPKPEVTK
Ga0068877_100161275	3300005525	Freshwater Lake	MRVRVMFDGLLKSKRFWAIAASIAVVALKDKVPLDEQQITQLVMAIGAWVIGDSLRSVSPKA*
Ga0068877_102568911	3300005525	Freshwater Lake	MKLDGLLKSKRFWAAAAVVAVIVLKDKTPLSDDQIQLMVWTVGSWIVGESVRPVDPPKAGA*
Ga0068876_101275414	3300005527	Freshwater Lake	MLNDLIKSKRFWAAVAGIAVVVLKDKLPIALDEQQITMIVMAIGSWIVGDSLRATVVK*
Ga0068876_102190003	3300005527	Freshwater Lake	MRSKMVAEEKTMKLDGLLKSKRFWAAAAVVAVIVLKDKTPLSDDQIQLMVWTVGSWIVGESVRPVDPPKAGA*
Ga0074649_10614905	3300005613	Saline Water And Sediment	MDFSNLIKSKRFWAAAAVVAVVVLKDRVPLNEQQITEIVLAVGAWIVGESIRPVNPPEVAK*
Ga0078117_10178285	3300005758	Lake Water	MDLQGLLKSKRFWAAVASVAVVVLKDKVPLTEDQINLIVLAIGGWIVGESIRPVNPPEVQK*
Ga0079957_10192322	3300005805	Lake	MKLDVLLKSKRFWAAAAVVAVVILKDKTPLTEQQIQELVLAVGAWIVGESIRPVEPPMAGA*
Ga0079957_12594542	3300005805	Lake	MNELLKSKRFWVAAATVAAIVLKDKVPLSEDQIQQLVWAIGAWIVGESIRPVEPKPEAAK
Ga0075471_101972401	3300006641	Aqueous	MLNDLIKSKRFWAAVAGIAVVVLKDKLPIALDEQQITTIVMAVGSWIVGDSLRATVVK*
Ga0102978_12738521	3300007177	Freshwater Lake	MKLDGLLKSKRFWAAAAVVAVVLLKDKTPLTDDQIQQLVWAVGAWIVGESVRPVDGPKVAA*
Ga0114340_10205726	3300008107	Freshwater, Plankton	MDFSNLIKSKRFWAAAAVVAVVVLKDRVPLNEQQITEIVLAVGAWIVGESIRPVNLPEVAK*
Ga0114343_10811473	3300008110	Freshwater, Plankton	MDFSNLLKSKRFWAAAAVVAVVVLKDRVPLNEQQITEIVLAVGAWIVGESIRPVNLPEVAK*
Ga0114355_11192232	3300008120	Freshwater, Plankton	MFDGLLKSKRFWAIAASIAVVALKDKVPLDEQQITQLVMAIGAWVIGDSLRSVSPKA*
Ga0114363_10347724	3300008266	Freshwater, Plankton	MRSKMVAEEKTMKLDGLLKSKRFWAAAAVVAVIVLKDKTPLTEQQIQELVLAVGAWIVGESIRPVEPPKVQA*
Ga0114363_11293812	3300008266	Freshwater, Plankton	MKLDGLLKSKRFWAAAAVVALSDDQIQLMVWTVGSWIVGESVRPVDPPKAGA*
Ga0114876_10841412	3300008448	Freshwater Lake	MDLQGLLKSKRFWASVASVAVVVLKDKVPLTEDQISLIVLAIGSWIVGESIRPVNPPEVLK*
Ga0114876_12245321	3300008448	Freshwater Lake	MESLFKSKRFWVSAAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESVRPVD
Ga0114876_12531412	3300008448	Freshwater Lake	KSKRFWAAAAVVAVVVLKDRVPLNEQQITEIVLAVGAWIVGESIRPVNLPEVAK*
Ga0114880_11416022	3300008450	Freshwater Lake	MKLDGLLKSKRFWAAAAVVAVIVLKDKTPLTEQQIQELVLAVGAWIVGESIRPVEPPKVQA*
Ga0110928_11258251	3300008510	Water Bodies	MNLNSVLKSKRFWLTAAAVAVVVLKDKTGLTDEQLTELVLAVGALVVGDSIRPVDPKVQA
Ga0129333_100692184	3300010354	Freshwater To Marine Saline Gradient	MESLFKSKRFWVSAAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESVRPVDLKPEVTK
Ga0129333_102619521	3300010354	Freshwater To Marine Saline Gradient	MESLFKSKRFWVSAAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESV
Ga0129333_103308173	3300010354	Freshwater To Marine Saline Gradient	MNIGDLFKSKRFWAAAATIAVVVLKDKTPLTDDQIQQLVWVVGAWIVGDSVRPLPKPDEVAK*
Ga0129333_110606362	3300010354	Freshwater To Marine Saline Gradient	MKLDGLLKSKRFWVAAASVAVVVLKDKVPLTEDQIQLIIFAVGSWIVGESIRPVEPPKVQA*
Ga0129333_111447511	3300010354	Freshwater To Marine Saline Gradient	KRFWAAAAVVAVVVLKDKVPLTEQQIQELVLAVGAWIVGESIRPVDGGKVAA*
Ga0129333_111948591	3300010354	Freshwater To Marine Saline Gradient	MRERGKIMNLGELVKSKRFWAAAATIAVVVLRDRVPLTDDQISQLVLAVGAWIVGESIRPVEPKPEVSK*
Ga0157596_11111281	3300012702	Freshwater	MNLGELVKSKRFWAAAATSAVVVLKDRVPLSEDQIQQLAWVIGAWIVGDSVRPLPKPDEVAS*
Ga0157600_11789142	3300012719	Freshwater	FWAAAATIAVVVLKDRVPLSEDQIQQLVWVIGAWIVGDSVRPLPKPDEVAS*
Ga0138286_12536511	3300012781	Freshwater Lake	GNMQDLLKSKRFWAAAAVVAVIVLKDKVPLSEEQIQQLVLAVGAWIVGDSIRPLPKPDEVAK*
Ga0164293_106538612	3300013004	Freshwater	MNISELVKSKRFWAAAATIAVVVLKDRVPLSEDQIQQLVWVIGAWIGGDSVRPLPKPDEVAS*
Ga0164292_110018182	3300013005	Freshwater	MQDLLKSKRFWAAAAVVAVIVLKDKVPLSEEQIQQLVLAVGAWIVGDSIRPLP
Ga0177922_107696061	3300013372	Freshwater	MLNDLIKSKRFWAALAGIVVVVAKDRLPIALDEQQITMIVLAIGSWIVGDSLRATVVK*
Ga0180058_11481883	3300016699	Freshwater	SKRFWAAAATIAVVILKDRVPLSEDQIQQLVWVIGAWIVGDSVRPLPKPDEVAS
Ga0181352_11040953	3300017747	Freshwater Lake	MESLFKSKRFWVSVAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESVRPV
Ga0207193_12440033	3300020048	Freshwater Lake Sediment	MQDLLKSKRFWAAAAVVAVVILKDRVPLTEEQIQQLVFAIGAWIVGDSIRPLPKPDEVAK
Ga0208091_10110673	3300020506	Freshwater	MESLFKSKRFWVSLAAVAVVVLKDKVPLTEDQIQLLVYTIGAWVVGESVRPVDPKPEVTK
Ga0207939_10327682	3300020536	Freshwater	MLNDLIKSKRFWAAVAGIVVVVAKDRLPIALDEQQITMIVLAIGSWIVGDSLRATVVK
Ga0214163_10142327	3300021141	Freshwater	LALATMQGTKGGCNMQDLLKSKRFWAAAAVVAVVVLKDKVPLSEEQIQQLVLAVGAWIVGDSIRPLPKPDEVAK
Ga0214163_10205381	3300021141	Freshwater	KRFWAAAAVVAVVVLKDKVPLSEDQIQQLVLAVGAWIVGDSIRPLPKPDEVAK
Ga0214163_10702373	3300021141	Freshwater	SKRFWAAAAVVAVIVLKDKVPLSEEQIQQLVLAVGAWIVGDSIRPLPKPDEVAK
Ga0214163_11387592	3300021141	Freshwater	MQDLLKSKRFWAAAAVVAVVVLKDKVPLSEEQIQQLVLAVGAWIVGDSIRPLPRPDE
Ga0181353_11651701	3300022179	Freshwater Lake	TLATMQGTKGGCNMQDLLKSKRFWAAAAVVAVIVLKDKVPLSEEQIQQLVLAVGAWIVGDSIRPLPKPDEVAK
Ga0214917_100771405	3300022752	Freshwater	MESLFKSKRFWVAAAAIAVVVLKDKVPLSEDQIQVLVYTIGAWIVGESIRPVDPKPEVTK
Ga0214917_102140493	3300022752	Freshwater	MESLFKSKRFWVAAAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESIRPVDPKPEVTK
Ga0214917_102454443	3300022752	Freshwater	MNIGDLFKSKRFWAAAATIAVVVLKDKTPLSEDQIQQLVWVVGAWIVADSVRPLPKPDEVTK
Ga0255147_10938251	3300024289	Freshwater	MNELLKSKRFWVAAATVAAIVLKDKIPLSEDQIQQLVWAIGAWIVGESIRPVEPKPEASK
Ga0255141_10250841	3300024351	Freshwater	MENLFKSKRFWAVAAVIAVVVLKDKVPLTEQQITEVVMAVGAWVVGESIRPVEPKS
Ga0255157_10278461	3300024355	Freshwater	RFWVAAATVAAIVLKDKIPLSEDQIQQLVWAIGAWIVGESIRPVEPKPEASK
Ga0256330_10915063	3300024481	Freshwater	EKPAKQARIMENLFKSKRFWAVAAVIAVVVLKDKVPLTEQQITEVVMAVGAWVVGESIRPVEPKS
Ga0256332_10974491	3300024484	Freshwater	KMNELLKSKRFWVAAATVAAIVLKDKIPLSEDQIQQLVWAIGAWIVGESIRPVEPKPEAS
Ga0256332_11007681	3300024484	Freshwater	KPAKQARIMENLFKSKRFWAVAAVIAVVVLKDKVPLTEQQITEVVMAVGAWVVGESIRPVEPKS
Ga0255181_10444122	3300024502	Freshwater	MKLDGLLKSKRFWAAAAVVAVVLLKDKTPLTDDQIQQLVWAVGAWIVGESVRPVDGPKVA
Ga0256336_11229872	3300024562	Freshwater	ELLKSKRFWVAAATVAAIVLKDKIPLSEDQIQQLVWAIGAWIVGESIRPVEPKPEVSK
Ga0255275_11443462	3300024574	Freshwater	FWVAAATVAAIVLKDKIPLSEDQIQQLVWAIGAWIVGESIRPVEPKPEVSK
Ga0208147_10674773	3300025635	Aqueous	KSKRFWAAAAVVAVIVLKDKVPLSEEQIQQLVLAVGAWIVGDSIRPLPKPDEVAK
Ga0208005_11020071	3300025848	Aqueous	MLNDLIKSKRFWAAVAGIAVVVLKDKLPIALDEQQITTIVMAVGSWIVGDSLRATVVK
Ga0255155_10155611	3300026455	Freshwater	VIMWVIMFLTCFPHQEKPAKQARIMENLFKSKRFWAVAAVIAVVVLKDKVPLTEQQITEVVMAVGAWVVGESIRPVEPKS
Ga0255160_10342243	3300026457	Freshwater	SKRFWAVAAVIAVVVLKDKVPLTEQQITEVVMAVGAWVVGESIRPVEPKS
Ga0256334_11145372	3300026566	Freshwater	AKQARIMENLFKSKRFWAVAAVIAVVVLKDKVPLTEQQITEVVMAVGAWVVGESIRPVEPKS
Ga0255270_10805193	3300026572	Freshwater	CKMNELLKSKRFWVAAATVAAIVLKDKIPLSEDQIQQLVWAIGAWIVGESIRPVEPKPEASK
Ga0255146_10997861	3300027396	Freshwater	MNELLKSKRFWVAAATVAAIVLKDKIPLSEDQIQQLVWAIGAWIVGESIRPVEPKPEVSK
Ga0209770_100793592	3300027769	Freshwater Lake	MFDGLLKSKRFWAIAASIAVVALKDKVPLDEQQITQLVMAIGAWVIGDSLRSVSPKA
Ga0209972_100609241	3300027793	Freshwater Lake	MLNDLIKSKRFWAAVAGIAVVVLKDKLPIALDEQQITMIVMAIGSWIVGDSLRATVVK
Ga0209229_101556783	3300027805	Freshwater And Sediment	MESLFKSKRFWVSAAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESVRPVDPKPEVAK
Ga0209985_100216883	3300027806	Freshwater Lake	MRVRVMFDGLLKSKRFWAIAASIAVVALKDKVPLDEQQITQLVMAIGAWVIGDSLRSVSPKA
Ga0209990_101899494	3300027816	Freshwater Lake	VRVMFDGLLKSKRFWAIAASIAVVALKDKVPLDEQQITQLVMAIGAWVIGDSLRSVSPKA
Ga0119944_10004855	3300029930	Aquatic	MNLNSVLKSKRFWLTAAAIAVVVLKDKTGLSDEQLTELVLALGALVVGDSIRPVDPKVQA
Ga0119944_10078564	3300029930	Aquatic	MKLDGLLKSKRFWVAAASVAVVVLKDKVPLTEEQIQLIIFAVGSWIVGESIRPVEPPKVG
Ga0119944_10373592	3300029930	Aquatic	MNLNSVLKSKRFWLTAAAVAVVVLKDKTGLSDEQLTELVLAVGALVVGDSIRPVDPKVQA
Ga0119945_10026667	3300029933	Aquatic	FRLGSVIQEARNMKLDSLLKSKRFWAVAAAVAVIVFEDKLPLSPDQIRGIVYAIGAWVVGESIRPVDPKVQL
Ga0119945_10203592	3300029933	Aquatic	MNFQELLKSKRFWATAASIAVVLFKDKLPLTEEQIQQLVYAIGAWVVGESVRPVASKFLGAK
Ga0315907_104873131	3300031758	Freshwater	GLLKSKRFWAAAAVVAVIVLKDKTPLTEQQIQELVLAVGAWIVGESIRPVEPPKVQA
Ga0315907_107745602	3300031758	Freshwater	MESLFKSKRFWVAAAAIAVVVLKDKVPLTEDQIQVLVYTIGAWIVGESIRPVDPKPEVTK
Ga0315899_110622622	3300031784	Freshwater	MDFSNLIKSKRFWAAAAVVAVVVLKDRVPLNEQQITEIVLAVGAWIVGESIRPVNLPEVA
Ga0315900_1000461810	3300031787	Freshwater	MDLQGLLKSKRFWASVASVAVVVLKDKVPLTEDQISLIVLAIGSWIVGESIRPVNPPEVL
Ga0315900_101028867	3300031787	Freshwater	MRSKMVAEEKTMKLDGLLKSKRFWAAAAVVAVIVLKDKTPLSDDQIQLMVWTVGSWIVGESVRPVDPPKAGA
Ga0315909_101979694	3300031857	Freshwater	MRSKMVAEEKTMKLDGLLKSKRFWAAAAVVAVIVLKDKTPLTEQQIQELVLAVGAWIVGESIRPVEPPKVQA
Ga0315909_103844253	3300031857	Freshwater	MEGLFKSKRFWVAAAAIAVVVLKDKVPLSEDQIQVLVYTIGAWIVGESIRPVDPKPEVAK
Ga0315909_104995362	3300031857	Freshwater	MKLDGLLKSKRFWAAAAVVAVIVLKDKTPLSDDQIQLMVWTVGSWIVGESVRPVDP
Ga0315904_100736815	3300031951	Freshwater	MKLDGLLKSKRFWAAAAVVAVIVLKDKTPLTEQQIQELVLAVGAWIVGESIRPVEPPKVQ
Ga0315904_106434482	3300031951	Freshwater	MDFSNLLKSKRFWAAAAVVAVVVLKDRVPLNEQQITEIVLAVGAWIVGESIRPVNLPEVA
Ga0315904_107071474	3300031951	Freshwater	MESLFKSKRFWVSLAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESVRP
Ga0315901_109344592	3300031963	Freshwater	MESLFKSKRFWVSLAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESVRPVDPKPEVAK
Ga0315903_105678772	3300032116	Freshwater	MESLFKSKRFWISAAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESVRPVDPKPEVTK
Ga0334980_0029891_1_162	3300033816	Freshwater	KRFWVSLAAVAVVVLKDKVPLTEDQIQILVYAVGAWVVGESIRPVDPKPEVTK
Ga0334980_0051805_1587_1733	3300033816	Freshwater	MESLFKSKRFWVSLAAVAVVVLKDKVPLTEDQIQILVYAVGAWVVGESI
Ga0334978_0033128_284_466	3300033979	Freshwater	MESLFKSKRFWVSLAAVAVVVLKDKVPLTEDQIQILIYAVGAWVVGESIRPVDPKPEVTK
Ga0334978_0427449_1_162	3300033979	Freshwater	MESLFKSKRFWVSAAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESVRPVDP
Ga0334994_0365503_220_408	3300033993	Freshwater	MNISELVKSKRFWAAAATIAVVILKDRVPLSEDQIQQLVWVVAAWVVGDSVRPLPKPDEVAS
Ga0334996_0055886_1423_1605	3300033994	Freshwater	MQDLLKSKRFWAAAAVVAVVVLKDRVPLTEEQIQQLVLAVGAWIVGDSIRPLPKPDEVAK
Ga0334986_0251153_298_480	3300034012	Freshwater	MESLFKSKRFWVSAAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESVRPVDPKPEVVK
Ga0334986_0499886_437_598	3300034012	Freshwater	KRFWAAAATIAVVVLKDRVPLSEDQIQQLVWVIGAWIVGDSVRPLPKPDEVAS
Ga0334987_0111690_42_224	3300034061	Freshwater	MESLFKSKRFWVSLAAVAVVVLKDKVPLTEDQIQILVYAVGAWVVGESIRPVDPKPEVIK
Ga0334987_0376724_2_157	3300034061	Freshwater	FWAAAATIAVVVLKDRVPLSEDQIQQLVWVIGAWIVGDSVRPLPKPDEVAS
Ga0334987_0566812_95_277	3300034061	Freshwater	MESLFKSKRFWVAAAAVAVVVLKDKVPLSEDQIQLLVYTIGAWVVGESIRPVDPKPEVTK
Ga0334995_0109326_1241_1423	3300034062	Freshwater	MESLFKSKRFWVSLAAVAVVVLKDKVPLTEDQIQILVYAVGAWVVGESIRPVDPKPEVAK
Ga0335010_0242647_892_1068	3300034092	Freshwater	MESLFKSKRFWVSLAAVAVVVLKDKVPLTEDQIQILVYAVGAWVVGESIRPVDPKPEVT
Ga0335014_0300366_244_426	3300034094	Freshwater	MQDLLKSKRFWAAAAVVAVIVLKDRVPLTEEQIQQLVLAVGAWIVGDSIRPLPKPDEVAK
Ga0335014_0519284_66_248	3300034094	Freshwater	MESLFKSKRFWVSLAAVAVVVLKDKVPLTEDQIQILVYTVGAWVVGESIRPVDPKPEVTK
Ga0335036_0027672_3904_4086	3300034106	Freshwater	MESLFKSKRFWVSVAAVAVVVLKDKVPLTEDQIQILVYAVGAWVVGESIRPVDPKPEVTK
Ga0335050_0305027_37_222	3300034108	Freshwater	MDFSNLLKSKRFWAAAAVVAVVVLKDRVPLNEQQITEIVLAVGAWIVGESIRPVNPPEVA
Ga0335053_0828269_83_271	3300034118	Freshwater	MNISELVKSKRFWAAAATIAVVVLKDRVPLSEDQIQQLVWVVGAWIVGYSVRPLPKPDEVAS
Ga0335052_0511456_3_158	3300034279	Freshwater	FWAAAATIAVVILKDRVPLSEDQIQQLVWVIGAWIVGDSVRPLPKPDEVAS
Ga0334997_0128828_1545_1688	3300034280	Freshwater	MESLFKSKRFWVSAAAIAVVVLKDKVPLSEDQIQLLVYTIGAWVVGES
Ga0335007_0599375_473_637	3300034283	Freshwater	SKRFWVSLAAVAVVVLKDKVPLTEDQIQILVYAVGAWVVGESIRPVDPKPEVTK
Ga0335007_0726641_15_197	3300034283	Freshwater	MQDLLKSKRFWAAAAVVAVVVLKDKVPLTEEQIQQLVLAVGAWIVGDSIRPLPKPDEVAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087093

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences