Metagenome / Metatranscriptome Family F087007

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087007
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	83 residues
Representative Sequence	MTPLPPELSNPSGSVARTLYDIAQGFDSPLDAEPRLRRTLGLLRRIVIYDRCALLEAPAAGAARLVVEPDAPENREGLGRVLTRF
Number of Associated Samples	93
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.36 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	94.55 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (15.454 % of family members)
Environment Ontology (ENVO)	Unclassified (28.182 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.82% β-sheet: 3.54% Coil/Unstructured: 56.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF06745	ATPase	80.00
PF00072	Response_reg	2.73
PF13545	HTH_Crp_2	1.82
PF01590	GAF	1.82
PF02954	HTH_8	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	41.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.18 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	41.82 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	15.45 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	41.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	15.45 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	40.91 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	12.73 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	40.91 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	12.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	40.91 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	12.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	40.91 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	12.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	40.91 %
Anaeromyxobacter dehalogenans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	12.73 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.82 %
Unclassified	root	N/A	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003995\|Ga0055438_10078131	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	904	Open in IMG/M
3300004024\|Ga0055436_10010642	All Organisms → cellular organisms → Bacteria → Proteobacteria	2023	Open in IMG/M
3300004145\|Ga0055489_10133933	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	740	Open in IMG/M
3300004157\|Ga0062590_100002619	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	6040	Open in IMG/M
3300004778\|Ga0062383_10285033	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300004778\|Ga0062383_10719565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	511	Open in IMG/M
3300005167\|Ga0066672_10880307	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	556	Open in IMG/M
3300005183\|Ga0068993_10089202	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	970	Open in IMG/M
3300005339\|Ga0070660_100669976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	869	Open in IMG/M
3300005446\|Ga0066686_10469300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	858	Open in IMG/M
3300005450\|Ga0066682_10516429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	757	Open in IMG/M
3300005467\|Ga0070706_100880138	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	828	Open in IMG/M
3300005518\|Ga0070699_101399137	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005558\|Ga0066698_11088574	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300005574\|Ga0066694_10107842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	1306	Open in IMG/M
3300005617\|Ga0068859_103015292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300006755\|Ga0079222_10200216	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1200	Open in IMG/M
3300006797\|Ga0066659_10358060	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1134	Open in IMG/M
3300006797\|Ga0066659_11154476	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006797\|Ga0066659_11737745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300006845\|Ga0075421_102099834	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300006846\|Ga0075430_100925095	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300006854\|Ga0075425_100960361	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300006903\|Ga0075426_10546250	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300006904\|Ga0075424_100341418	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1595	Open in IMG/M
3300006904\|Ga0075424_101435598	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300006904\|Ga0075424_101653378	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300006914\|Ga0075436_100486531	Not Available	901	Open in IMG/M
3300009053\|Ga0105095_10502783	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300009098\|Ga0105245_11910906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300009137\|Ga0066709_102092622	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300009147\|Ga0114129_10778973	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300009162\|Ga0075423_11416886	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300009162\|Ga0075423_12376812	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300009777\|Ga0105164_10447881	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	640	Open in IMG/M
3300009795\|Ga0105059_1007459	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300009808\|Ga0105071_1004364	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1704	Open in IMG/M
3300009810\|Ga0105088_1039915	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	776	Open in IMG/M
3300009836\|Ga0105068_1088659	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300009836\|Ga0105068_1095316	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300010323\|Ga0134086_10144346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	865	Open in IMG/M
3300010325\|Ga0134064_10355352	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573	Open in IMG/M
3300010326\|Ga0134065_10099322	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300010337\|Ga0134062_10389643	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	679	Open in IMG/M
3300010364\|Ga0134066_10349826	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300012157\|Ga0137353_1088929	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012189\|Ga0137388_10286943	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300012208\|Ga0137376_11121364	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	673	Open in IMG/M
3300012975\|Ga0134110_10500859	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012975\|Ga0134110_10544486	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300013102\|Ga0157371_10729319	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	743	Open in IMG/M
3300014154\|Ga0134075_10486254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300014883\|Ga0180086_1053602	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300015357\|Ga0134072_10090470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	925	Open in IMG/M
3300015373\|Ga0132257_101215160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	954	Open in IMG/M
3300015373\|Ga0132257_101648638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	821	Open in IMG/M
3300015374\|Ga0132255_102797543	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300018031\|Ga0184634_10147168	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1055	Open in IMG/M
3300018052\|Ga0184638_1243812	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300018052\|Ga0184638_1284243	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300018053\|Ga0184626_10231843	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	777	Open in IMG/M
3300018079\|Ga0184627_10661508	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300018084\|Ga0184629_10562200	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300018482\|Ga0066669_10675756	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	909	Open in IMG/M
3300019259\|Ga0184646_1008294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1639	Open in IMG/M
3300020063\|Ga0180118_1033193	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300025327\|Ga0209751_11081808	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300025907\|Ga0207645_10613074	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300025910\|Ga0207684_10290105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	1411	Open in IMG/M
3300025910\|Ga0207684_10413899	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1158	Open in IMG/M
3300025910\|Ga0207684_10859123	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	764	Open in IMG/M
3300026295\|Ga0209234_1073525	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1299	Open in IMG/M
3300026298\|Ga0209236_1142038	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1029	Open in IMG/M
3300026313\|Ga0209761_1029242	All Organisms → cellular organisms → Bacteria → Proteobacteria	3332	Open in IMG/M
3300026314\|Ga0209268_1049568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1343	Open in IMG/M
3300026333\|Ga0209158_1086421	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300026523\|Ga0209808_1272265	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300026527\|Ga0209059_1252459	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300026528\|Ga0209378_1016855	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	4186	Open in IMG/M
3300026532\|Ga0209160_1217029	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300026538\|Ga0209056_10066722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	3113	Open in IMG/M
3300026547\|Ga0209156_10501892	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300026548\|Ga0209161_10571662	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300027840\|Ga0209683_10403364	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300027907\|Ga0207428_10465163	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300027909\|Ga0209382_11740900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300028587\|Ga0247828_10932204	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	562	Open in IMG/M
3300028589\|Ga0247818_10552083	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300028597\|Ga0247820_10520418	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	812	Open in IMG/M
3300028803\|Ga0307281_10141321	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	839	Open in IMG/M
3300028809\|Ga0247824_10168609	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1185	Open in IMG/M
3300028889\|Ga0247827_10345442	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	885	Open in IMG/M
3300031720\|Ga0307469_12011750	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031720\|Ga0307469_12525574	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031740\|Ga0307468_100828972	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300031820\|Ga0307473_10110753	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1485	Open in IMG/M
3300031847\|Ga0310907_10532950	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300031854\|Ga0310904_10720989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M
3300031949\|Ga0214473_10301979	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300031949\|Ga0214473_11205847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	783	Open in IMG/M
3300032005\|Ga0307411_10201195	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300032180\|Ga0307471_100856944	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300032180\|Ga0307471_101875815	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	749	Open in IMG/M
3300032180\|Ga0307471_102863315	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300032180\|Ga0307471_103500853	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300033407\|Ga0214472_10052861	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4110	Open in IMG/M
3300033417\|Ga0214471_11378924	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300033813\|Ga0364928_0088117	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	721	Open in IMG/M
3300034178\|Ga0364934_0336793	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	571	Open in IMG/M
3300034643\|Ga0370545_130886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	20.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.73%
Plants	Host-Associated → Plants	20.00%
Aquatic	Environmental → Aquatic	17.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.36%
Sediment	Environmental → Aquatic → Sediment	7.27%
Freshwater	Environmental → Aquatic → Freshwater	6.36%
Marine	Environmental → Aquatic → Marine	3.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.64%
Floodplain	Environmental → Terrestrial → Floodplain	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.27%
Loam	Environmental → Terrestrial → Soil → Loam	5.45%
Sand	Environmental → Terrestrial → Soil → Sand	4.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.27%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.64%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.64%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.82%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.91%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009777	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water	Environmental	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055438_100781313	3300003995	Natural And Restored Wetlands	MTPVARTLYDIAQSFASPLDAELRLRRALGLLRQIVPSDRCALLEAPEAAPARLVVEPDVPEERDRLRRVLTRCLE
Ga0055436_100106424	3300004024	Natural And Restored Wetlands	MTPVARTLYDIAQSFASPLDAELRLRRALGLLRQIVPSDRCALLEAPEAAPARLVVEPDVPEE
Ga0055489_101339331	3300004145	Natural And Restored Wetlands	MTRLPSAPSNPAPSVARTLYDIAQGFDWPVDPEPRLRRALRLLRRIVPYDRCGLIDMPAVGAPRVVVEPDAAEERGDVGRILRRFVTLLADEA
Ga0062590_1000026196	3300004157	Soil	VRPLPPDAAHPVGSVARTLYDIAQGFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDAAVERESLRRILTRFLRLLTDDAQREPG
Ga0062383_102850331	3300004778	Wetland Sediment	MSPFFSKRTSNVGPVARTLYDIGQGFDSPFDSETRLRRALKLLLRIIPYHQCALLESVTGESRFVVESDSREQ
Ga0062383_107195652	3300004778	Wetland Sediment	VSPFFTKRSNTSVVVSRTLYDIAQGFDSPFESETRLRRAQKLMRRIVPYHQCALLETTAGESQLLIEPD
Ga0066672_108803072	3300005167	Soil	MTSFRPDASSPTGPVARTLYDIAQGFDWPLDPQARLRRALRLLRRIVPYDRCGLLDRPAVGAPRLVVEPD
Ga0068993_100892023	3300005183	Natural And Restored Wetlands	MTPVARTLYDIAQSFASPLDAELRLRRALGLLRQIVPSDRCALLEAPEAAPARLVVEPDVPEERDRLRRVLTRCLEVVTDEPR
Ga0070660_1006699762	3300005339	Corn Rhizosphere	VRPLPPDAAHPVGSVARTLYDIAQGFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDAAEEREGVGRI
Ga0066686_104693002	3300005446	Soil	MTPLRPEPANPVVSVARMLYDIGQGFDSPVDIEFRLRRALGLLRRIVPYDRCALLEVPAAGPARLVVEPDAPE
Ga0066682_105164291	3300005450	Soil	MTPLLPDLSNPSGSVARTLYDIAQGFDSPLDAEPRLRRTLGLLRRIVIYDRCALLEAPAAGAARLVVEPDAPE
Ga0070706_1008801382	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTPLRSGSSDLAGSGARTLYDIAQGFDSPLDAELRIRHALGLLRRVVPYDRCALLEASAAGAARLVVEPDAPE
Ga0070699_1013991372	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTPLRPDVSNPVGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDGAEAREGMSRVLRRFLALLTEETHRARPGRP
Ga0066698_110885741	3300005558	Soil	MTPVRPEPANPAVSVARMLYDIGQGFDSPVDIEFRLRRALGLLRRIVPYDRCALLEVPAAGPARLVVEPDTPEGRE
Ga0066694_101078421	3300005574	Soil	MTPLPPELSNPSGSVARTLYDIAQGFDSPLDAEPRLRRTLGLLRRIVIYDRCALLEVPAAGAARLVVEPDAPENREGLGRVLTRF
Ga0068859_1030152922	3300005617	Switchgrass Rhizosphere	VRPLPPDAAHPVGSVARTLYDIAQGFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDAAVERESLRRILTRFLSLLT
Ga0079222_102002162	3300006755	Agricultural Soil	MTPNPPDASDPVGLVARTLSDIAQGFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGAPRLLVEPDAVEEREGVHRILRRFLTVLTDEAQRAAGR
Ga0066659_103580601	3300006797	Soil	MMPLSPDLSSPSGSVARTLYDIAQAFDSPLDAEPRLRRTLALLRRIVPYDRCALLEAPAAGAARLVVEPDAPENREGLGRVLTRFLTALTDEPPRAAR
Ga0066659_111544762	3300006797	Soil	MTPLRPRASNPFPSVARTLYDIAEGFDSPVDADSRLRRALGLLRGLVPYDHCGLLEVSAAGAARLVVEPDAPQARQALDQVLTRFLAILTDEPTQDPDWLPPDL
Ga0066659_117377452	3300006797	Soil	MTSFRPDASSPTGPVARTLYDIAQGFDWPLDPQARLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDAPEEREGVGRILRRFLSLLTDESHRAT
Ga0075421_1020998341	3300006845	Populus Rhizosphere	MPHHPDPANLVGSVARTLYDIGQSFDSPLDTEPRLRRALGLLRRIVPYDRCALLEAPAAGPARLVVEPDVPEARESLSRVLTRFLTVVTDESQRD
Ga0075430_1009250952	3300006846	Populus Rhizosphere	MTPLPPDASHPVGLVARTLYDISQGLDWPLDPEPRLRHALRLLRRIVPYDRCGLLDMPAVGAPRLVVEPDAAE
Ga0075425_1009603611	3300006854	Populus Rhizosphere	MTPLPPDASNQMGSFARTLYDIAQGLDLPFDTELRLRRALRLLHRIVPYERCALLEAAAPHPARLVVEPDAPEERETLLRMLTRFLT
Ga0075426_105462502	3300006903	Populus Rhizosphere	MRRTPVSRSLRSVARVLYDITQGFDSPHDPEPRLRRALGLLRSIVPYDRCALLETSAGGPGRIIVAPDSPEESERLRRVLTRL
Ga0075424_1003414181	3300006904	Populus Rhizosphere	MSPVARTLYDIAQGLDSPLDAELRLRRALGLLRRIVPADRCALLGAPAGVAARFVVEPDVPAEREPLRQVLTR
Ga0075424_1014355982	3300006904	Populus Rhizosphere	MTPLGPTPANSAGSVARTLYDIAHGFDSPVGTEPRLQRALRLLCGIVPNDRCALLEVTGPGPARLVV
Ga0075424_1016533782	3300006904	Populus Rhizosphere	MTPNPSDASDPVGLVARTLYSIAQGLDWPLDPEPRLRHALRLLRRIVPYERCGLLDAPAVRAPRLVVEPYAVEERERVRRILTRFLTVLTDEAHWATG
Ga0075436_1004865312	3300006914	Populus Rhizosphere	MTPRPQAPRSLGSVARVLYDITQGFDSPRDSGPRLRRALALLGSIVPYDRCALLETSMVGAGRFMVEPDSPEDRELLTPVLTRFL
Ga0105095_105027831	3300009053	Freshwater Sediment	MRSVGRTLYDIAQCFDWPVDPEPRLRRALRLLRRIVPYDRCGLLDTAGAGAPLLVVEPDAPDERAGVSRILR
Ga0105245_119109061	3300009098	Miscanthus Rhizosphere	MTMPLNRTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDAAEEREGVGRI
Ga0066709_1020926222	3300009137	Grasslands Soil	MPLSPDLSSPSGSVARTLYDIAQAFDSPLDAEPRLRRTLALLRRIVPYDRCALLEAPAAGAARLVVEPD
Ga0114129_107789731	3300009147	Populus Rhizosphere	MSPLFPKRSSPVGSVARTLYDIAQGFDSPLDTESRLRRALKLLRRIIPYRQCALLEAAAGESRLVVEPD
Ga0075423_114168862	3300009162	Populus Rhizosphere	MTPLPPDASNRAGSFARTLYDIAQGLDLPFDIELRLRRALRLLQRIVPYERCALLEAPAFHPARLVVEPDA
Ga0075423_123768121	3300009162	Populus Rhizosphere	MSPLFPKRSNPVGSVARTLYDIAQGFDSPLDTEPRLRRALKLRRRIVPYRQCALLAAATGESRLL
Ga0105164_104478813	3300009777	Wastewater	MSLGPAPPNSVESVARTLYDIAQGFDAPVDTEPRLQRALRLLRGIVPNDRCALLEVTTGAGPARLVVEPDAPEEHAALRRVLTRFL
Ga0105059_10074591	3300009795	Groundwater Sand	LTNPFQSVARTLYDIAQGFDSPLDTESRLRRALVLLRRIVPSNRCALFEVPEAGAARLVVEPDIPE
Ga0105071_10043641	3300009808	Groundwater Sand	LTNPFQSVARTLYDIAQGFDSPLDSEFRLRRALGLLSRIVPGDRCALFEAPAAGAARLVIEPDVPEEREALRRVLTRALVVITDEPRGAAAS
Ga0105088_10399152	3300009810	Groundwater Sand	MTPRPAPSNSVGSVAGTLYDIAQGFDSPLDPEPRLQRALRLLRRIVPYDRCALLEVPAAGPARLVVEPDAPEERESLSRVLTRFLTVLTDETKRGADWRPPNV
Ga0105068_10886592	3300009836	Groundwater Sand	MTPRPAPSNSVGSVAGTLYDIAQGFDSPLDPEPRLQRALRLLRRIVPYDRCGLLDTPAIGPPRLVVEPDAAEERE
Ga0105068_10953161	3300009836	Groundwater Sand	LTNPFQSVARTLYDIAQGFDSPLDTESRLRRALGLLRSIVPSDRCALFEAPAAGSARLVVEPDIPEEREALRRVLTRSLTVITDEPGGAADSLPP
Ga0134086_101443461	3300010323	Grasslands Soil	MTPLPPELSNPSGSVARTLYDIAQGFDSPLDAEPRLRRTLGLLRRIVIYDRCALLEAPAAGAARLVVEPDAPENREGLGRVLTRF
Ga0134064_103553522	3300010325	Grasslands Soil	MTPLLPDLSNPSGSVARTLYDIAQGFDSPLDAEPRLRRTLGLLRRIVIYDRCALLEVPAAGAARLVVEPDAPENREGLGRVLTRFLTALTDEPPRAAR
Ga0134065_100993221	3300010326	Grasslands Soil	MTPLLPDLSNPSGSVARTLYDIAQSFDSPLDAEPRLRRTLGLLRRIVIYDRCALLEVPAAGAARLVVEPDAPENREGL
Ga0134062_103896432	3300010337	Grasslands Soil	MTPLLPDLSNPSGSVARTLYDIAQGFDSPLDAERRLRRTLGLLRRIVPYDRCALLEVPAAGAARLVVEPDAPENREGLGRVLTRFLTAL
Ga0134066_103498261	3300010364	Grasslands Soil	VAFNVVGIVARTLYDIAQGFDWPLDPEARLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDAPEEREGVGRILRRFLSLLTDESHRATVR
Ga0137353_10889292	3300012157	Soil	MNPLFPNRSNPVGSVARTLYDIAQGFDSPLDTEPRLRRALKLLRRIVPYHQCALLEAAAGESRLLVEPDSREERE
Ga0137388_102869432	3300012189	Vadose Zone Soil	MTPLRPVPSNPVGSIARTLYDIGQGFDSPLDAEPRLRHALGLLRRIVPYDHCALLEAPAAGAARL
Ga0137376_111213642	3300012208	Vadose Zone Soil	MTSFRPDASSPTGPVARTLYDIAQGFDWPLDPEARLRRALRLLRRIVPYDRCGLLDKPAVGAPRLVVEPDAREEREGVGRILSR
Ga0134110_105008591	3300012975	Grasslands Soil	MTSYRPGASDPVQLVARTLHDIAQGFDWLLDPEPRLRRALRLLRRIVPYDRCGLLDMPAVGGSRLVVEPDAPEERDGV
Ga0134110_105444862	3300012975	Grasslands Soil	MMPLSPDLSSPSGSVARTLYDIAQAFDSPLDAEPRLRRTLALLRRIVPYDRCALLEAPAAGAARLVVEPDAPENREGLGRVLTRFLTALTDEPPRAARWLPPDVA
Ga0157371_107293191	3300013102	Corn Rhizosphere	MTPLAQDTSTPAGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDAAEERDGVGR
Ga0134075_104862541	3300014154	Grasslands Soil	MTPLRPEPANPVVSVARMLYDIGQGFDSPVDIEFRLRRALGLLRRIVPYDRCALLEVPAAGPARLVVEPDAPEGREALSRVLTAFLILTDESQRAADWL
Ga0180086_10536024	3300014883	Soil	MIPLFLNRSSPVGSVARTLYDIAQGFDSPLDTEPRLRRALKLLRRIVPYHQCALLEAAAGASRLVVEPDS
Ga0134072_100904702	3300015357	Grasslands Soil	MTSYRPGASDPVQLVARTLYDIAQGFDWLLDPEPRLRRALRLLRRIVPYDRCGLLDMPAVGGSRVVVEPDAPEERDRVARILRRFVAVLTDEAHR
Ga0132257_1012151601	3300015373	Arabidopsis Rhizosphere	MTPLTLDTSTPAGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGTPRLVVEPDAVEEREGVGRILRRFLALL
Ga0132257_1016486381	3300015373	Arabidopsis Rhizosphere	MPLGPDPSNPIGSAARTLYDISQVFDSPLDSELRLQHALRLLRRVVPYDRCALLETPAAGPARFVVEPEAPEEREPLRRVLTR
Ga0132255_1027975432	3300015374	Arabidopsis Rhizosphere	MTPLVQDTVTSAGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDAAEERDGVGRILRRFLALLTDEPR
Ga0184634_101471682	3300018031	Groundwater Sediment	MSPLFPVRSSPVGSVARTLYDIAQSFDSPLDTELRLRRALKLLRRIVPYHQCALLEAAAGESRLVVEPDSREERESLSPVLAR
Ga0184638_12438122	3300018052	Groundwater Sediment	MTPLFWKRSSPVGSVARTLYDIAQGFDSPLDSEPRLRRALKLLRRIVPYHQCALLEAVAGDPQPGLAPHRRQEREAVGADRAPEILGAAPAP
Ga0184638_12842431	3300018052	Groundwater Sediment	MSPLFWNRSSPAGSVARTLYDIAQGFDSPLDTEPRLRRALKLLRRIVPYHQCALLEAAAGESRLVVEPDSREERETLSPLLA
Ga0184626_102318432	3300018053	Groundwater Sediment	MTPLRPDASSPFQSVARTLYDIAQGFDSPLDTESRLRRALGLLRRIVPSDRCALFEAPAAGAARLVVEPDVPEEREALRRVLTRSLTVITDEPRGAADSLP
Ga0184627_106615081	3300018079	Groundwater Sediment	MTPLRPGSSNVVGSFARTLYDIGQGFDSPLDTEPRLRRALGLLRRIVPYDHCALLEAPAAGAARLVVEPDAL
Ga0184629_105622001	3300018084	Groundwater Sediment	MSPLFPNRSSPVGSVARTLYDIAQGFDSPLDTEPRLRRALKLLRRIVPYHQCALLEAAAGASRLVVEPDSREEREALSPVLARFLTVLTDDAKRG
Ga0066669_106757562	3300018482	Grasslands Soil	MTSYRPGASDPVQLVARTLYDTAQGFDWLLDPEARLRRALRLLRRIVPYDRCGLLDMPAVGGSRLVVEPDAPEERDGVA
Ga0184646_10082941	3300019259	Groundwater Sediment	MTPLRPDASSPFQSVARTLYDIAQGFDSPLDTESRLRRALVLLRRIVPSDRCALFEAPAAGAARLVVEPDTPEEREALRRVLTRSLTVITDEPRGAADSLPSD
Ga0180118_10331932	3300020063	Groundwater Sediment	MTPLRPDSSNTVGSVARALYDIGQGFDSPVDTEPRLRRALGLLRRIVPYDHCALLEAPAAGAARLVVEP
Ga0209751_110818081	3300025327	Soil	MTPLFPNRSSLVRSVARTLYDIAQGFDSPFDTEPKLRRALKMLRRIVPYDRCALLEASAGASQLVVEPDAPEERES
Ga0207645_106130742	3300025907	Miscanthus Rhizosphere	MTPLVQDTVTPAGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDAAEERDGVG
Ga0207684_102901051	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTPLRSGSSDLAGSGARTLYDIAQGFDSPLDAELRIRHALGLLRRVVPYDRCALLEASAAGAARLVVEPDAPEVREALNPV
Ga0207684_104138991	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMPLGSGARTIYDIAQGFDSPLDAELRIRHALGLLRRIVPYDRCALLEAPAAGAARVVAEPDGLETREALGRVLTGFL
Ga0207684_108591232	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTPLRPDASNPVGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDGAEAREGMSRVLRRFLALLT
Ga0209234_10735251	3300026295	Grasslands Soil	MTSFRPEASSPTGPVARTLYDIAQGFDWPLDPEARLRRALRLLRRIVPYDRCGLLDTPAVGAPRLVVEPDAPEEREGVGRI
Ga0209236_11420382	3300026298	Grasslands Soil	MTPLRPEPANPVVSVARMLYDIGQGFDSPVDIEFRLRRALGLLRRTVPYDRCALLEVPAAGPARLVVEPDAPEGREALSRVLTAFLILTDES
Ga0209761_10292425	3300026313	Grasslands Soil	MTPLRPDASNPFPSVARTLYDIAQGFDSPLETESRLRRALGLLRCIVPSDRCALFEAPAAGAARLVVEPDIPEEREALRRVLTRS
Ga0209268_10495681	3300026314	Soil	MTPLPPELSNPSGSVARTLYDIAQGFDSPLDAEPRLRRTLGLLRRIVIYDRCALLEVPAAGAARLVVEPDAPENREGLGRVLTR
Ga0209158_10864211	3300026333	Soil	MTSFRPDASSPTGPVARTLYDIAQGFDWPLDPQARLRRALRLLRRIVPYDRCGLLDRPAVGAPRLVVEPDAREEREGV
Ga0209808_12722652	3300026523	Soil	MTSYRPGASDPVQLVARTLYDIAQGFDWLLDPEPRLRRALRLLRRIVPYDRCGLLDMPAVGGSRLVVEPDAP
Ga0209059_12524592	3300026527	Soil	MTSYRPGASDPVQLVARTLYDIAQGFDWLLDPEPRLRRALRLLRRIVPYDRCGLLDMPAVGGSRVVVEPDAPEERDGVARILRR
Ga0209378_10168555	3300026528	Soil	MMPLSPDLSSPSGSVARTLYDIAQAFDSPLDAEPRLRRTLALLRRIVPYDRCALLEAPAAGAARLVVEPDAPENREGLG
Ga0209160_12170291	3300026532	Soil	MTSFRPDASSPTGPVARTLYDIAQGFGWPLDPEARLRRALRLLRRIVPYDRCGLLDKPAVGAPRLVVEPDAP
Ga0209056_100667224	3300026538	Soil	MMPLSPDLSSPSGSVARTLYDIAQAFDSPLDAEPRLRRTLALLRRIVPYDRCALLEAPAAGAARLVVEPDAPENQEGLGRVLPRFLTALTGEPPQAAHW
Ga0209156_105018921	3300026547	Soil	MTPLLPDLSNPSGSVARTLYDIAQSFDSPLDAEPRLRRTLGLLRRIVIYDRCALLEVPAAGAARLVVEPDAPEN
Ga0209161_105716621	3300026548	Soil	MTPLLPDLSNPSGSVARTLYDIAQSFDSPLDAEPRLRRTLGLLRRIVIYDRCALLEVPAAGAARLVVEPDA
Ga0209683_104033641	3300027840	Wetland Sediment	VSPFFTKRSNTSVVVSRTLYDIAQGFDSPFESETRLRRAQKLMRRIVPYHQCALLETTAGESQLLIEPDSWGQREVLSPLMARILA
Ga0207428_104651632	3300027907	Populus Rhizosphere	MMPLAPATPTPAGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGPPRLVVEPDAAEERE
Ga0209382_117409002	3300027909	Populus Rhizosphere	MSWIFPKPSSPVGSIARTLYDIEQGFDSPLDTEPRLRRALKLLQRIVPYHQCALLEAAAGESRLVVEPDSREERE
Ga0247828_109322041	3300028587	Soil	MTLVARTLYDIAQGFDSPLDAGLRLRRALELLRRIVPADRCALLDAPTGAAARFVVEPDVAEEREPLRRALTRFLTIVTD
Ga0247818_105520831	3300028589	Soil	MTPLPPDASHPVGLVARTLYDISQGLDWPLDPEPRLRHALRLLRRIVPYDRCGLLDMPAVGAPQLVVEPDAAEERE
Ga0247820_105204181	3300028597	Soil	MMPLAPATPTPAGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGPPRLVVEPDAAEEREGVGRILRRFLNLL
Ga0307281_101413211	3300028803	Soil	MMSWIFPKQSSPVGSIARTLYDIEQGFDSPLDTEPRLRRALKLLQRIVPYHQCALLEAAAGESRLVVEPDSQEEREALSPVLARFLTVLSD
Ga0247824_101686092	3300028809	Soil	MTPLPPDASHPVGLVARTLYDISQGLDWPLDPEPRLRHALRLLRRIVPYDRCGLLDMPAVGAPRLVVEPDAAEEREGLGRILRRFLTLLTGQAHR
Ga0247827_103454421	3300028889	Soil	MMPLAPATPTPAGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGPPRLVVEPDAAEEREGVGRILRRF
Ga0307469_120117502	3300031720	Hardwood Forest Soil	MTPLPPDASNRAGSSARTLYDIAQGLDLPFDIELRLRRALRLLQRIVPYERCALLEAPASNQARLVVEP
Ga0307469_125255742	3300031720	Hardwood Forest Soil	MIPVARTLYDITQGFDSPLDAELRLRRALGLLRRIMPADRCALLETPVGAAARFVVEPDVPEEREP
Ga0307468_1008289721	3300031740	Hardwood Forest Soil	MTPHPPDPSDPVQLVARALYDIAQGFDWPLDPESRLRRALRLLRRIVPYDRCGVLDTPVVGAPRLVVEPDT
Ga0307473_101107531	3300031820	Hardwood Forest Soil	MTPLGSGARTIYDIAQGFDSPLDAELRIRHALGLLRRLVPYDRCALLEAPAAGTARMVAEPDLPETRETLRRVLTRF
Ga0310907_105329501	3300031847	Soil	MMPLAPATPTPAGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPAVGPPRLVVEPDAAEEREGVGRILRRFLNLLTDEPRRGTDW
Ga0310904_107209891	3300031854	Soil	MTPLASDTSTASGSVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPSVGTPRLVVEPDSEEEREGVGRILRRFLALLTDEPRRDTDW
Ga0214473_103019793	3300031949	Soil	MSPLFPNRSSLVGSVARTLYDIAQGFDSPLDTEPRLRRALKLLRRIVPYHQCALLEAAAGESRLLVEPDS
Ga0214473_112058472	3300031949	Soil	VTPLHPDPSNLVGSVARTLYDIGQGFDSPLDAEPRLRRALGLLRRIVPYDHCALLEAPAAGVARLVVQPDAPENREGLGRVLTRFLIVVTDESPRAA
Ga0307411_102011952	3300032005	Rhizosphere	VRPVARTLYDIAQSFDWPLDPEPRLRRALRLLRRIVPYDRCGLLDTPGIGMPRLLVEPEDAEDREGVSRILR
Ga0307471_1008569442	3300032180	Hardwood Forest Soil	VNPFQSVARTLYDIAQGFDSPLDSEFRLRRALELLRSIVPSDRCAFFGSPVIGVPQFVVEPDVPE
Ga0307471_1018758152	3300032180	Hardwood Forest Soil	MTPNPSDASDPVGLVARTLYDIAQGLDWPLDPEPRLRHALRLLRRIVPYERCGLLDAPAVRAPRLVVEPDAVEERERVRRILTRFLTVLT
Ga0307471_1028633152	3300032180	Hardwood Forest Soil	MTPLRPAPSNPGASVARTLYDIGQGFDSPLDPEPRLRRALGLLRRIVPYDPSALLEAPAAGAARLVVEPEAP
Ga0307471_1035008531	3300032180	Hardwood Forest Soil	MTIRTLNDIAQGFDSPVGAELRLRRALGLLRDLVPYDHCGLLEAPAAGAARLVVEPDVPETRATLDQMLTRCLAVLTDEPSQGA
Ga0214472_100528616	3300033407	Soil	MSPLFPSRSRPVGSVARTLYDIAQSFDSPLDTEPRLRRALKLLRRIVPYHQCALLEAAAGESRLLVEPDSREERESLSAVLARFL
Ga0214471_113789241	3300033417	Soil	MTPRPAPSNLVGSVARTLYDIAQGFDSPLDPESRLRRALRLLRLVVPYDRCALLEAPAAGPARLVVEPDAPEERESLSRVLRRFMTVLTDETKRGADWRPPNVAPFAH
Ga0364928_0088117_404_721	3300033813	Sediment	MTPLGPGSSNFVGSGARTLYDIAQGFDSPLDAEFRIRHALGLLRRIVPYDRCALLEAPAAGAARLVVEPDALETQEALNRVLTRFLTVLTDAPPRAADWLPPDVVH
Ga0364934_0336793_2_289	3300034178	Sediment	MTPRPAPSNSAVGSVARTLYDIAQGFDSPLDPEPRLRRALRLLRRVVPYDRCALFETPAAGPARLVVEPDAPEERESLSRVLRRFLTVLTDETKRG
Ga0370545_130886_2_271	3300034643	Soil	MRPLFLNRSSPVGSVARTFYDIAQGFDSPLDTEPRLRRALKLLRRIVPYHQCALLEAAAGASRLVVEPDSREEREALSPVLARFLTVLTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087007

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences