Metagenome / Metatranscriptome Family F086988

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086988
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	102 residues
Representative Sequence	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAAESGPNGAQPPVN
Number of Associated Samples	87
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.18 %
% of genes near scaffold ends (potentially truncated)	21.82 %
% of genes from short scaffolds (< 2000 bps)	67.27 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.273 % of family members)
Environment Ontology (ENVO)	Unclassified (38.182 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 76.24% β-sheet: 0.00% Coil/Unstructured: 23.76%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13089	PP_kinase_N	31.82
PF01464	SLT	16.36
PF13090	PP_kinase_C	10.91
PF13180	PDZ_2	2.73
PF02567	PhzC-PhzF	1.82
PF04191	PEMT	0.91
PF00977	His_biosynth	0.91
PF04055	Radical_SAM	0.91
PF05299	Peptidase_M61	0.91
PF01408	GFO_IDH_MocA	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	1.82
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.91
COG3975	Predicted metalloprotease, contains C-terminal PDZ domain	General function prediction only [R]	0.91

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	76.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	76.36 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.91 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	58.18 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	14.55 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.91 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	58.18 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.91 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	58.18 %
Acinetobacter calcoaceticus/baumannii complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex	0.91 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.91 %
Actinosynnema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinosynnema	0.91 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	58.18 %
unclassified Acinetobacter calcoaceticus/baumannii complex	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → unclassified Acinetobacter calcoaceticus/baumannii complex	0.91 %
Actinosynnema mirum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinosynnema → Actinosynnema mirum	0.91 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.91 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	58.18 %
Acinetobacter sp. 809848	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → unclassified Acinetobacter calcoaceticus/baumannii complex → Acinetobacter sp. 809848	0.91 %
Actinosynnema mirum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinosynnema → Actinosynnema mirum	0.91 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.91 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.91 %
Unclassified	root	N/A	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10288620	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	805	Open in IMG/M
3300002908\|JGI25382J43887_10462055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinosynnema → Actinosynnema mirum	537	Open in IMG/M
3300005174\|Ga0066680_10002133	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	8542	Open in IMG/M
3300005174\|Ga0066680_10193077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1285	Open in IMG/M
3300005175\|Ga0066673_10036302	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2406	Open in IMG/M
3300005175\|Ga0066673_10182173	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300005176\|Ga0066679_10730807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300005177\|Ga0066690_10184654	All Organisms → cellular organisms → Bacteria → Proteobacteria	1383	Open in IMG/M
3300005177\|Ga0066690_10312875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1062	Open in IMG/M
3300005178\|Ga0066688_10040933	All Organisms → cellular organisms → Bacteria → Proteobacteria	2632	Open in IMG/M
3300005179\|Ga0066684_10221282	All Organisms → cellular organisms → Bacteria → Proteobacteria	1232	Open in IMG/M
3300005181\|Ga0066678_10131558	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300005187\|Ga0066675_10598834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	828	Open in IMG/M
3300005332\|Ga0066388_104134865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → unclassified Acinetobacter calcoaceticus/baumannii complex → Acinetobacter sp. 809848	740	Open in IMG/M
3300005447\|Ga0066689_10022028	All Organisms → cellular organisms → Bacteria	3135	Open in IMG/M
3300005454\|Ga0066687_10150507	All Organisms → cellular organisms → Bacteria → Proteobacteria	1230	Open in IMG/M
3300005540\|Ga0066697_10143433	All Organisms → cellular organisms → Bacteria → Proteobacteria	1408	Open in IMG/M
3300005546\|Ga0070696_101388300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	599	Open in IMG/M
3300005557\|Ga0066704_10435522	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	867	Open in IMG/M
3300005559\|Ga0066700_10122749	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300005561\|Ga0066699_10519129	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
3300005561\|Ga0066699_10906244	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300005575\|Ga0066702_10113388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1566	Open in IMG/M
3300005598\|Ga0066706_11138918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300006032\|Ga0066696_10073837	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300006046\|Ga0066652_100553169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1078	Open in IMG/M
3300006755\|Ga0079222_11748759	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006800\|Ga0066660_10201768	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300006844\|Ga0075428_101193552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	802	Open in IMG/M
3300006852\|Ga0075433_10089710	All Organisms → cellular organisms → Bacteria	2717	Open in IMG/M
3300006854\|Ga0075425_100196874	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300006880\|Ga0075429_100695811	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	890	Open in IMG/M
3300007255\|Ga0099791_10144154	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1111	Open in IMG/M
3300007255\|Ga0099791_10313409	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300007265\|Ga0099794_10001471	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	8248	Open in IMG/M
3300007265\|Ga0099794_10032161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2461	Open in IMG/M
3300007788\|Ga0099795_10171464	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	901	Open in IMG/M
3300007788\|Ga0099795_10235111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	785	Open in IMG/M
3300009012\|Ga0066710_100005811	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11358	Open in IMG/M
3300009012\|Ga0066710_100015641	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	8077	Open in IMG/M
3300009012\|Ga0066710_100571218	All Organisms → cellular organisms → Bacteria → Proteobacteria	1713	Open in IMG/M
3300009038\|Ga0099829_10000008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	100492	Open in IMG/M
3300009038\|Ga0099829_10308440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1299	Open in IMG/M
3300009089\|Ga0099828_10110509	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2389	Open in IMG/M
3300009089\|Ga0099828_10650382	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	948	Open in IMG/M
3300009143\|Ga0099792_10048589	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2058	Open in IMG/M
3300009147\|Ga0114129_10002258	All Organisms → cellular organisms → Bacteria	26634	Open in IMG/M
3300009147\|Ga0114129_10661557	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1347	Open in IMG/M
3300010335\|Ga0134063_10301124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	771	Open in IMG/M
3300010360\|Ga0126372_10710153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	983	Open in IMG/M
3300010360\|Ga0126372_11614998	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	687	Open in IMG/M
3300011269\|Ga0137392_10019007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4782	Open in IMG/M
3300011271\|Ga0137393_10034821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3844	Open in IMG/M
3300012202\|Ga0137363_10990706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	714	Open in IMG/M
3300012203\|Ga0137399_10003829	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7887	Open in IMG/M
3300012203\|Ga0137399_10140119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1921	Open in IMG/M
3300012204\|Ga0137374_10154732	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300012205\|Ga0137362_10249741	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1532	Open in IMG/M
3300012212\|Ga0150985_120652193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300012358\|Ga0137368_10175396	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1552	Open in IMG/M
3300012362\|Ga0137361_10131872	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2214	Open in IMG/M
3300012395\|Ga0134044_1035783	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	657	Open in IMG/M
3300012402\|Ga0134059_1339398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300012403\|Ga0134049_1129747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300012406\|Ga0134053_1261365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300012685\|Ga0137397_10006244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	8250	Open in IMG/M
3300012917\|Ga0137395_10460351	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	914	Open in IMG/M
3300012918\|Ga0137396_10001702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11776	Open in IMG/M
3300012927\|Ga0137416_10003090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	9031	Open in IMG/M
3300012927\|Ga0137416_10214604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1552	Open in IMG/M
3300012927\|Ga0137416_11294305	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300012930\|Ga0137407_10079007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2766	Open in IMG/M
3300012930\|Ga0137407_10492816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1143	Open in IMG/M
3300015054\|Ga0137420_1240025	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1848	Open in IMG/M
3300018431\|Ga0066655_11261763	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300018433\|Ga0066667_10701746	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300018468\|Ga0066662_10792977	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	918	Open in IMG/M
3300018468\|Ga0066662_10995648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	830	Open in IMG/M
3300018468\|Ga0066662_11202944	Not Available	767	Open in IMG/M
3300018482\|Ga0066669_11125193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300019789\|Ga0137408_1350632	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300025939\|Ga0207665_11510001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300026320\|Ga0209131_1038146	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2776	Open in IMG/M
3300026328\|Ga0209802_1065099	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1741	Open in IMG/M
3300026331\|Ga0209267_1073687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1488	Open in IMG/M
3300026532\|Ga0209160_1314705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300026538\|Ga0209056_10328602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1027	Open in IMG/M
3300026552\|Ga0209577_10008392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	9474	Open in IMG/M
3300027512\|Ga0209179_1116975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300027669\|Ga0208981_1065493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	925	Open in IMG/M
3300027671\|Ga0209588_1008077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3113	Open in IMG/M
3300027846\|Ga0209180_10013261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4293	Open in IMG/M
3300027846\|Ga0209180_10476901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	701	Open in IMG/M
3300027862\|Ga0209701_10069741	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2226	Open in IMG/M
3300027873\|Ga0209814_10488078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300027882\|Ga0209590_10002880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6996	Open in IMG/M
3300027903\|Ga0209488_10010247	All Organisms → cellular organisms → Bacteria	6886	Open in IMG/M
3300027903\|Ga0209488_10030048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3958	Open in IMG/M
3300027903\|Ga0209488_10053935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2962	Open in IMG/M
3300027903\|Ga0209488_10258441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1305	Open in IMG/M
3300027909\|Ga0209382_10082029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3798	Open in IMG/M
3300028536\|Ga0137415_10068388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3416	Open in IMG/M
3300030997\|Ga0073997_12094868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	739	Open in IMG/M
3300030998\|Ga0073996_12196005	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300031093\|Ga0308197_10213958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	663	Open in IMG/M
3300031421\|Ga0308194_10114054	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	794	Open in IMG/M
3300031720\|Ga0307469_10104566	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2000	Open in IMG/M
3300031740\|Ga0307468_100619472	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	888	Open in IMG/M
3300032180\|Ga0307471_100830495	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1091	Open in IMG/M
3300032205\|Ga0307472_100314835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1266	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.82%
Host-Associated	Host-Associated	8.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.82%
Plants	Host-Associated → Plants	8.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.27%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_102886201	3300001661	Forest Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQDLARTPVSTNKEGSPAESGPNGAQPPVN*
JGI25382J43887_104620551	3300002908	Grasslands Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRDRIAELGAEXEKLGRKVQELARTPAAASKDPQAAESGPNGAQPPVN*
Ga0066680_100021336	3300005174	Soil	MFTSEQVKQAFGTAQAKAAAKAKEFETEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGPNGAQPPVN*
Ga0066680_101930773	3300005174	Soil	MFTTEQFKQAFGTAQARATAKAREFEAEARKILEALGDRAQAELKVLISQTKGGTRAQIVQVGSEIEKLGRKLQDLARSAEPAKEPSPNGDAATSGVQPPVN*
Ga0066673_100363022	3300005175	Soil	MFTSEQVKQAFGSAQAKATAKAKEFEVEARKILEALGDRAQAELKVLIAQTKTDTRGRIADLGAEIEKLGRKVQELARSAGELKNGDPAGPNGADRPAN*
Ga0066673_101821732	3300005175	Soil	MFTSEQVKQAFGSAQAKASAKAKEFEGEARKIFEALGDRAQAELKVLISQARSDTRGRIADLGAELEKLGRKVQELARSADQKNGAETAAGPNGAEPPVN*
Ga0066679_107308071	3300005176	Soil	MFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPLATKNASAAETGPNGAQPPVN*
Ga0066690_101846542	3300005177	Soil	MFTSEQVKQAFGTAQARASAKAKEFEVEARKILEALGDRAQAELKVLISQAKTDTRTRIADLGAELEKLGRKVQALVRAAEEKANADASAGPNGAQPPVN*
Ga0066690_103128752	3300005177	Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRGRIAELGAELEKLGRKVQELARTPAAPKAESADSGPNGAQPPVN*
Ga0066688_100409333	3300005178	Soil	MFTSEQVKQAFGNAQARASAKAKEFEAEARKVLEALGDRAQAELKVLISQAKGGTREQIVQVGAEIEKLGRKLQELARSAQPAKEAANGEAATSGVQPPVN*
Ga0066684_102212822	3300005179	Soil	MFTSEQMKQAFGTAQAKAAAKAKEFETEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGPNGAQ
Ga0066678_101315582	3300005181	Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGPNGAQPPVN*
Ga0066675_105988342	3300005187	Soil	MFTSEQMKQAFGSAQAKATAKAKEFEAEARKILEALGDRAQAELKVLISQAKSDTRGRIADLGAELEKLGRKVQELARSAAVKDGGEPAPGPNGAQPPVN*
Ga0066388_1041348651	3300005332	Tropical Forest Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKILEALGDRAQAELKVLISAARSDTRDRIADLGAELEKLGRKVQELARTPAAKNEPAETGPNGPQTPVN*
Ga0066689_100220284	3300005447	Soil	MFTSEQMKQAFGTAQAKAAAKAKEFETEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGPNGAQPPVN*
Ga0066687_101505072	3300005454	Soil	MFTSEQVKQAFGNAQARASAKAKEFEAEARKVLEALGDRAQAELKVLISQAKGGTREQIIQVGAEIEKLGRKLQELARSAQPAKEAANGEAATSGVQPPVN*
Ga0066697_101434331	3300005540	Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRGRIAELGAELEKLGRKVQELARTPAAPKAESAESGPNGAQPPVN*
Ga0070696_1013883002	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SDGLDMAPRRVTWWGVTHRVTGHWRIAMFTSEQVKQAFGTAQAKAAAKAKEFETEARKVLEALGDRAQAELKVLISSAKSDTRDRIAVLGADIEKLGRKVQELARSVPTAKEAAAETGPNGSAQPPVN*
Ga0066704_104355222	3300005557	Soil	MFTSEQVKQAFGSAQAKASAKAKEFEVEARKILEALGDRAQAELKVLISQAKSDTRGRIADLGAELEKLGRKVQDLVRAAEAKATADAAPGPNGAEPPVN*
Ga0066700_101227492	3300005559	Soil	MFTSEQVRQAFGTAQAKATAKAKEYEAEARKILEALGDRAQAELKVLLSQAKVETRGRIADLGAELEKLGRKVQELARTATPKETASETQSAAAGPNGAQPPIN*
Ga0066699_105191292	3300005561	Soil	EQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRGRIAELGAELEKLGRKVQELARTPAAPKAESADSGPNGAQPPVN*
Ga0066699_109062441	3300005561	Soil	MFTSEQVKQAFGSAQAKASAKAKEFEGEARKIFEALGDRAQAELKVLISQARSDTRGRIADLGAELEKLGRKVQELARSADQKNGAETSAGPNGAEPPVN*
Ga0066702_101133881	3300005575	Soil	MFTSEQMKQAFGTAQAKAAAKAKEFETEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGP
Ga0066706_111389182	3300005598	Soil	SAQAKATAKAKEFEVEARKILEALGDRAQAELKVLIAQTKTDTRGRIADLGAEIEKLGRKVQELARSAGELKNGDPAGPNGADRPAN*
Ga0066696_100738374	3300006032	Soil	KQAFGTAQAKAAAKAKEFETEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGPNGAQPPVN*
Ga0066652_1005531691	3300006046	Soil	QVKQAFGSAQAKASAKAKEFEGEARKIFEALGDRAQAELKVLIAQTKTDTRGRIADLGAEIEKLGRKVQELARSAGELKNGDPAGPNGADRPAN*
Ga0079222_117487591	3300006755	Agricultural Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTKDRIADLGAELEKLGRKVQELARTPAAPKAESAESGPNGAQPPVN*
Ga0066660_102017682	3300006800	Soil	MFTSEQVKQAFGSAQAKASAKAKEFEVEARKILEALGDRAQAELKVLISQAKSDTRGRIADLGAELEKLGRKVQDLVRAAVAKATADAAPGPNGAEPPVN*
Ga0075428_1011935521	3300006844	Populus Rhizosphere	MFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQELARTPVPTKDASPAETGPNGAQPPVN*
Ga0075433_100897103	3300006852	Populus Rhizosphere	MFTSDQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGADLEKLGRKVQELARTPAIAKDGGAETGPNGAQPPVN*
Ga0075425_1001968741	3300006854	Populus Rhizosphere	MFTSDQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGADLEKLGRKVQELARTPAVAKDGGAETGPNGAQPPVN*
Ga0075429_1006958111	3300006880	Populus Rhizosphere	MFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQELARTPAPTKDASPAETGPNGAQPPVN*
Ga0099791_101441542	3300007255	Vadose Zone Soil	MVSVTQCVTGGLAMFTSEQVKQAFGTAQAKASAKAKEFEAEARKVLEALGDRAQAELKVLISTAKSDTRDRIADLGAELEKLGRKVQDLARTPVPPKDAAAESGPNGAQPPVN*
Ga0099791_103134092	3300007255	Vadose Zone Soil	MLVHHAMRQGRTSMFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQDLARTPVSTKEGSPAESGPNGAQPPVN*
Ga0099794_100014714	3300007265	Vadose Zone Soil	MLFLTQCVRGGVSMFTSEQVKQAFGTAQAKASAKAKEFEAEARKVLEALGDRAQAELKVLISTAKSDTRDRIADLGAELEKLGRKVQDLARTPVPPKDAAAESGPNGAQPPVN*
Ga0099794_100321614	3300007265	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQDLARTPVSTKEGSPAESGPNGAQPPVN*
Ga0099795_101714641	3300007788	Vadose Zone Soil	MFTSEQMKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQTELKVLISGAKSDTRDRISDLGAELEKLGRKVQELARTPAAAKDSAETGPNGAQPPVN*
Ga0099795_102351112	3300007788	Vadose Zone Soil	AQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQELARTPVSTAKDASAAESGPNGAQPPVN*
Ga0066710_1000058114	3300009012	Grasslands Soil	MFTSEQMKQAFGTAQAKAAAKAKEFETEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASAAESGPNGAQPPVN
Ga0066710_1000156418	3300009012	Grasslands Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRGRIAELGAELEKLGRKVQELARTPAAPKAESAESGPNGAQPPVN
Ga0066710_1005712182	3300009012	Grasslands Soil	MFTSEQMKQAFGSAQAKATAKAKEFEAEARKILEALGDRAQAELKVLISQAKSDTRGRIADLGAELEKLGRKVQELARSAAVKDGGEPAPGPNGAQPPVN
Ga0099829_1000000819	3300009038	Vadose Zone Soil	MRVTQRVTGGSSMFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRDRIAELGAELEKLGRKVQELARTPAAASKDSQAAESGPNGAQPPVN*
Ga0099829_103084401	3300009038	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAAESGPNGAQPPVN*
Ga0099828_101105092	3300009089	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAPESGPNGAQAPVN*
Ga0099828_106503822	3300009089	Vadose Zone Soil	MVRLTQCVKGGLSMFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISSAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAAESGPNGAQPPIN*
Ga0099792_100485891	3300009143	Vadose Zone Soil	MFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAAESGPNGAQPPIN*
Ga0114129_1000225825	3300009147	Populus Rhizosphere	MRTPTVASDSRNVLDTPRRRVTSYPVTHRVRGGKAMFTSDQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGADLEKLGRKVQELARTPAVAKDGGAETGPNGAQPPVN*
Ga0114129_106615572	3300009147	Populus Rhizosphere	MFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQELARTPVPTTDASPAETGPNGAQPPVN*
Ga0134063_103011241	3300010335	Grasslands Soil	AKAKEFETEARKILEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGPNGAQPPVN*
Ga0126372_107101532	3300010360	Tropical Forest Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKILEALGDRAQAELKVLISAARTDTRDRIADLGAELEKLGRKVQELARTPAATKSEPAEPGPNGTQTPVN*
Ga0126372_116149981	3300010360	Tropical Forest Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTKDRIAELGAEIEKLGRKVQELARTPAAPKAESAESGPNGAQPPVN*
Ga0137392_100190072	3300011269	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAEAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAAESGPNGAQPPVN*
Ga0137393_100348213	3300011271	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAEAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAAESGPNGAQAPVN*
Ga0137363_109907062	3300012202	Vadose Zone Soil	MPVTQRVTGGSSMFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISSARSDTRDRIAELGAELEKLGRKVQELARTPAAASKDSQAAESGP
Ga0137399_100038294	3300012203	Vadose Zone Soil	MVSVTQCVTGGLAMFTSEQVKQAFGTAQAKASAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARSPVPPKDAAAESGPNGAQPPIN*
Ga0137399_101401191	3300012203	Vadose Zone Soil	MFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQDLARTPVATKGAPPAETGPNGAQPPVN*
Ga0137374_101547322	3300012204	Vadose Zone Soil	MVSLTQCVKGGFSMFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDGAAAESGPNGAQPPIN*
Ga0137362_102497412	3300012205	Vadose Zone Soil	MPVTQRVTGGSSMFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRDRIAELGAELEKLGRKVQELARTPAAASKDSQAAESGPNGAQPPVN*
Ga0150985_1206521931	3300012212	Avena Fatua Rhizosphere	MFTSEQVKQAFGTAQARASAKAKEFEAEARKVLEALGDRAQTELKVLISAAKSDTRDRIAELGAELEKLGRKVQELARTPVSTAKDASAAESGPNGAQPPVN*
Ga0137368_101753962	3300012358	Vadose Zone Soil	MVSLTQCVKGGFSMFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDGAAAESGPNGAQSPIN*
Ga0137361_101318722	3300012362	Vadose Zone Soil	MLSFTQCVRRTSMFTSEQVRQAFGTAQAKATAKAKEYEAEARKILEALGDRAQAELKVLLSQAKVETRGRIADLGAELEKLGRKVQELARTAAPKETASETQSAAAGPNGAQPPIN*
Ga0134044_10357832	3300012395	Grasslands Soil	QGRISMFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISATKSDTRDRIADLGAELEKLGRKVQELARTPVATAKDASATESGPNGAQPPVN*
Ga0134059_13393981	3300012402	Grasslands Soil	TMFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRGRIAELGAELEKLGRKVQELARTPAAAPKAESADSGPNGAQPPVN*
Ga0134049_11297471	3300012403	Grasslands Soil	RQGRISMFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISATKSDTRDRIADLGAELEKLGRKVQELARTPVATAKDASATESGPNGAQPPVN*
Ga0134053_12613651	3300012406	Grasslands Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLFSTARSDTRERIAELGAELEKLGRKVQELARTPAAPKAEPADSGPNGAQPPVN*
Ga0137397_100062444	3300012685	Vadose Zone Soil	MFTSEQVKQAFGTAQAKASAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARSPVPPKDAAAESGPNGAQPPIN*
Ga0137395_104603512	3300012917	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAAESGPNGAQPPIN*
Ga0137396_1000170210	3300012918	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQDLARTPVSTKEGSPADSGPNGAQPPVN*
Ga0137416_100030905	3300012927	Vadose Zone Soil	MLAHHAMRQGRTSMFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQDLARTPVSTKEGSPADSGPNGAQPPVN*
Ga0137416_102146041	3300012927	Vadose Zone Soil	AKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARSPVPPKDAAAESGPNGAQPPIN*
Ga0137416_112943051	3300012927	Vadose Zone Soil	MLFLTQCVRGGVSMFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTAKSDTRDRIADLGAELEKLGRKVQDLARTPVPPKDAAAESGPNGAQPPVN*
Ga0137407_100790072	3300012930	Vadose Zone Soil	MLSFTQCVRRTSMFTSEQVRQAFGTAQAKATAKAKEYEAEARKILEALGDRAQAELKVLLSQAKVETRGRIADLGAELEKLGRKVQELARTATPKETASETQSAAAGPNGAQPPIN*
Ga0137407_104928162	3300012930	Vadose Zone Soil	MFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISATKSDTRDRIAELGAELEKLGRKVQELARTPLATKDGSPAETGPNGAQPPVN*
Ga0137420_12400252	3300015054	Vadose Zone Soil	MLAHHAMRQGRTSMFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQDLARTPVSTKEGSPAESGPNGAQPPVN*
Ga0066655_112617631	3300018431	Grasslands Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRGRIAGLGAELEKLGRKVQELARTPAAPKAESADSGPNGAQPPVN
Ga0066667_107017461	3300018433	Grasslands Soil	MFTSEQVKQAFGTAQAKAAAKAKEFETEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGP
Ga0066662_107929772	3300018468	Grasslands Soil	MFTSEQMKQAFGTAQAKAAAKAKEFETEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGPNGAQPPVN
Ga0066662_109956481	3300018468	Grasslands Soil	MFTSEQVKQAFGSAQAKASAKAKEFEGEARKIFEALGDRAQAELKVLISQARSDTRGRIADLGAELEKLGRKVQELARSADQKNGAETSAGPNGAEPPVN
Ga0066662_112029442	3300018468	Grasslands Soil	MFTSEQVKQAFGNAQARASAKAKEFEAEARKVLEALGDRAQAELKVRTWQAKGGSREQIVQVGAETEKLGRKLQERARSAQPAKEAANGEAATSGVQPPVN
Ga0066669_111251932	3300018482	Grasslands Soil	MFTSEQVKQAFGSAQAKATAKAKEFEVEARKILEALGDRAQAELKVLIAQTKTDTRGRIADLGAEIEKLGRKVQELARSAGELKNGDPAGPNGADRPAN
Ga0137408_13506323	3300019789	Vadose Zone Soil	MFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISATKSDTRDRIAELGAELEKLGRKVQELARTPLATKDGSPAETGPTARSRPSTDGDRRAAGG
Ga0207665_115100011	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRDRIAELGAELEKLGRKVQELARTPAAASKDSQAAESGPNGAQPPVN
Ga0209131_10381462	3300026320	Grasslands Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQDLARTPVSTKEGSPAESGPNGAQPPVN
Ga0209802_10650992	3300026328	Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGPNGAQPPVN
Ga0209267_10736872	3300026331	Soil	MFTSEQVKQAFGNAQARASAKAKEFEAEARKVLEALGDRAQAELKVLISQAKGGTREQIVQVGAEIEKLGRKLQELARSAQPAKEAANGEAATSGVQPPVN
Ga0209160_13147051	3300026532	Soil	KAAAKAKEFETEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDASPAESGPNGAQPPVN
Ga0209056_103286022	3300026538	Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTARSDTRGRIAELGAELEKLGRKVQELARTPAAPKAESADSGPNGAQPPVN
Ga0209577_100083924	3300026552	Soil	MFTSEQMKQAFGTAQAKAAAKAKEFETEARKVLEALGDRAQTELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPAATKDA
Ga0209179_11169752	3300027512	Vadose Zone Soil	MFTSEQMKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQTELKVLISAAKSDTRDRIAELGAELEKLGRKVRDLARTPVSTKEGSPAD
Ga0208981_10654931	3300027669	Forest Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQDLARTPVSTNKEGSPAESGPNGAQPPVN
Ga0209588_10080773	3300027671	Vadose Zone Soil	MFTSEQVKQAFGTAQAKASAKAKEFEAEARKVLEALGDRAQAELKVLISTAKSDTRDRIADLGAELEKLGRKVQDLARTPVPPKDAAAESGPNGAQPPVN
Ga0209180_100132614	3300027846	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAAESGPNGAQAPVN
Ga0209180_104769012	3300027846	Vadose Zone Soil	GTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAVAAESGPNGAQPPVN
Ga0209701_100697412	3300027862	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAAESGPNGAQPPVN
Ga0209814_104880781	3300027873	Populus Rhizosphere	FTSDQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGADLEKLGRKVQELARTPAIAKDGGAETGPNGAQPPVN
Ga0209590_100028805	3300027882	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDGAAAESGPNGAQPPIN
Ga0209488_100102474	3300027903	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPVPPKDAAAAESGPNGAQPPIN
Ga0209488_100300484	3300027903	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQDLARTPVSTKEGSPADSGPNGAQPPVN
Ga0209488_100539352	3300027903	Vadose Zone Soil	MFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQELARTPVSTAKDASAAESGPNGAQPPVN
Ga0209488_102584412	3300027903	Vadose Zone Soil	MFTSEQMKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQTELKVLISGAKSDTRDRIADLGAELEKLGRKVQELARTPAAAKDSAETGPNGAQPPVN
Ga0209382_100820293	3300027909	Populus Rhizosphere	MFTSEQVKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIAELGAELEKLGRKVQELARTPVPTKDASPAETGPNGAQPPVN
Ga0137415_100683882	3300028536	Vadose Zone Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKVLEALGDRAQAELKVLISTAKSDTRDRIADLGAELEKLGRKVQDLARTPVPPKDAAAESGPNGAQPPVN
Ga0073997_120948681	3300030997	Soil	EQVKQAFGTAQARASAKAKEFEVEARKILEALGDRAQSELKVLISQAKSDTRTRISDLGAELEKLGRKVQALVRAAEEKANAEASAGPNGAQPPVN
Ga0073996_121960051	3300030998	Soil	LEMFTSEQMKQVFGTAQAKATAKAKEFEVEARKVLEALGDRAQVELKVLISGAKSDTRDRIADLGAELEKLGRKVQELARTPAAAKDSAETGPNGAQPPVN
Ga0308197_102139582	3300031093	Soil	MFTSEQVKQVFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISTAKSDTRDRIADLGAELEKLGRKVQELARTPLATRNASAAETGPNGAQPPVN
Ga0308194_101140542	3300031421	Soil	EQMKQAFGTAQAKATAKAKEFEAEARKVLEALGDRAQAELKVLISAAKSDTRDRIADLGAELEKLGRKVQELARTPLATRDVSAAETGPNGAQPPVN
Ga0307469_101045662	3300031720	Hardwood Forest Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKILEALGDRAQAELKVLISAARSDTRDRIADLGAELEKLGRKVQDLARTPAATKTEPAEQGPNGPQTPVN
Ga0307468_1006194721	3300031740	Hardwood Forest Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKILEALGDRAQAELKVLISAARSDTRDRIADLGAELEKLGRKVQDLARTSAATKTEPAEQGPNGPQTPVN
Ga0307471_1008304951	3300032180	Hardwood Forest Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKILEALGDRAQTELKVLISTARSDTRDRIADLGAELEKLGRKVQELARTPAAPKDPPAASGPNGSQAPIN
Ga0307472_1003148352	3300032205	Hardwood Forest Soil	MFTSEQVKQAFGTAQAKAAAKAKEFEAEARKILEALGDRAQAELKVLVSAARSDTRDRIADLGAELEKLGRKVQELARTPAATKAEPAEQGPNGAQPPVN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086988

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences