NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F086983

Metagenome Family F086983

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F086983
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 68 residues
Representative Sequence MFPLMLVDTPDDRYRDRPGPSWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Number of Associated Samples 86
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 18.18 %
% of genes near scaffold ends (potentially truncated) 40.91 %
% of genes from short scaffolds (< 2000 bps) 93.64 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (70.909 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Grasslands → Soil
(14.546 % of family members)
Environment Ontology (ENVO) Unclassified
(40.909 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.909 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 54.74%    β-sheet: 0.00%    Coil/Unstructured: 45.26%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF01546Peptidase_M20 21.82
PF04542Sigma70_r2 21.82
PF13577SnoaL_4 6.36
PF13490zf-HC2 4.55
PF02878PGM_PMM_I 1.82
PF132794HBT_2 0.91
PF08281Sigma70_r4_2 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 21.82
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 21.82
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 21.82
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 21.82
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 1.82
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 1.82

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms70.91 %
UnclassifiedrootN/A29.09 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001305|C688J14111_10026661All Organisms → cellular organisms → Bacteria1717Open in IMG/M
3300001305|C688J14111_10102601All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300001686|C688J18823_10753904Not Available619Open in IMG/M
3300002568|C688J35102_119418499Not Available691Open in IMG/M
3300002568|C688J35102_119697286All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300002568|C688J35102_120051342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea860Open in IMG/M
3300002568|C688J35102_120474974All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300002568|C688J35102_120479337Not Available1103Open in IMG/M
3300002568|C688J35102_120582111All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300002568|C688J35102_120684392All Organisms → cellular organisms → Bacteria1349Open in IMG/M
3300002568|C688J35102_120734928All Organisms → cellular organisms → Bacteria1447Open in IMG/M
3300002568|C688J35102_120846375All Organisms → cellular organisms → Bacteria1796Open in IMG/M
3300004081|Ga0063454_100500712Not Available854Open in IMG/M
3300004081|Ga0063454_100549213All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300004081|Ga0063454_101104254All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300004153|Ga0063455_100745153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria668Open in IMG/M
3300004156|Ga0062589_100729047All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300004463|Ga0063356_105708087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria534Open in IMG/M
3300004643|Ga0062591_101150135All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300005093|Ga0062594_102252771Not Available591Open in IMG/M
3300005327|Ga0070658_11003924All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300005327|Ga0070658_11894891Not Available515Open in IMG/M
3300005329|Ga0070683_100144752All Organisms → cellular organisms → Bacteria2252Open in IMG/M
3300005331|Ga0070670_100248660All Organisms → cellular organisms → Bacteria1549Open in IMG/M
3300005331|Ga0070670_100289618All Organisms → cellular organisms → Bacteria1431Open in IMG/M
3300005337|Ga0070682_100318602Not Available1147Open in IMG/M
3300005337|Ga0070682_101340064Not Available609Open in IMG/M
3300005339|Ga0070660_101282312Not Available621Open in IMG/M
3300005341|Ga0070691_10494849Not Available706Open in IMG/M
3300005347|Ga0070668_100336423All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.1274Open in IMG/M
3300005356|Ga0070674_100198466All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1548Open in IMG/M
3300005437|Ga0070710_10069673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2024Open in IMG/M
3300005456|Ga0070678_100154782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1851Open in IMG/M
3300005458|Ga0070681_11820725All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300005547|Ga0070693_100443992Not Available909Open in IMG/M
3300005563|Ga0068855_100924057Not Available920Open in IMG/M
3300005577|Ga0068857_100075679All Organisms → cellular organisms → Bacteria3001Open in IMG/M
3300005578|Ga0068854_101174411Not Available687Open in IMG/M
3300005615|Ga0070702_100430947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium952Open in IMG/M
3300005718|Ga0068866_10078710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. SYSU D006931764Open in IMG/M
3300005718|Ga0068866_10387732All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300005834|Ga0068851_10205649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.1100Open in IMG/M
3300005840|Ga0068870_10246250All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300006755|Ga0079222_12092785All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300006844|Ga0075428_101183329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria806Open in IMG/M
3300006854|Ga0075425_100434079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.1513Open in IMG/M
3300006854|Ga0075425_102800120Not Available537Open in IMG/M
3300006880|Ga0075429_101070927All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300006903|Ga0075426_11326864All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300009093|Ga0105240_10431616Not Available1478Open in IMG/M
3300009094|Ga0111539_12263321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria630Open in IMG/M
3300009094|Ga0111539_13149821Not Available532Open in IMG/M
3300009098|Ga0105245_11526473All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300009098|Ga0105245_11771029All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300009176|Ga0105242_10597145All Organisms → cellular organisms → Bacteria1066Open in IMG/M
3300010397|Ga0134124_10544748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1129Open in IMG/M
3300010400|Ga0134122_10971123All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300011119|Ga0105246_10901949All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300012915|Ga0157302_10342027Not Available596Open in IMG/M
3300012960|Ga0164301_11032611Not Available648Open in IMG/M
3300012961|Ga0164302_10046734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2119Open in IMG/M
3300012987|Ga0164307_10346988Not Available1076Open in IMG/M
3300013105|Ga0157369_12265875All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria551Open in IMG/M
3300014325|Ga0163163_10418728Not Available1398Open in IMG/M
3300014325|Ga0163163_11224397All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300014326|Ga0157380_10877503Not Available921Open in IMG/M
3300014969|Ga0157376_10320984All Organisms → cellular organisms → Bacteria1472Open in IMG/M
3300015372|Ga0132256_100739828All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300015373|Ga0132257_101731941Not Available802Open in IMG/M
3300015374|Ga0132255_104499314All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300017792|Ga0163161_11276963All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300017792|Ga0163161_11487788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082594Open in IMG/M
3300017792|Ga0163161_11499736Not Available592Open in IMG/M
3300019356|Ga0173481_10233773Not Available818Open in IMG/M
3300025321|Ga0207656_10074217All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.1517Open in IMG/M
3300025898|Ga0207692_10236654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.1089Open in IMG/M
3300025899|Ga0207642_10496893All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300025899|Ga0207642_10635672Not Available667Open in IMG/M
3300025901|Ga0207688_10017676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.3878Open in IMG/M
3300025908|Ga0207643_10215574All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300025909|Ga0207705_10928425All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300025916|Ga0207663_10351632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.1116Open in IMG/M
3300025918|Ga0207662_10005949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales6553Open in IMG/M
3300025925|Ga0207650_10393091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1146Open in IMG/M
3300025925|Ga0207650_10571354All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300025932|Ga0207690_11321738All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300025935|Ga0207709_10828836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales748Open in IMG/M
3300025942|Ga0207689_10068191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2924Open in IMG/M
3300025944|Ga0207661_10191311All Organisms → cellular organisms → Bacteria1794Open in IMG/M
3300025961|Ga0207712_10157136Not Available1763Open in IMG/M
3300025972|Ga0207668_10864464Not Available803Open in IMG/M
3300026078|Ga0207702_11373616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082700Open in IMG/M
3300026118|Ga0207675_102722400Not Available503Open in IMG/M
3300027907|Ga0207428_10738600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria702Open in IMG/M
3300028589|Ga0247818_10232429All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300028590|Ga0247823_11401443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082524Open in IMG/M
3300028608|Ga0247819_11012900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082526Open in IMG/M
3300028705|Ga0307276_10117607All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300028799|Ga0307284_10481478Not Available509Open in IMG/M
3300028812|Ga0247825_10288532All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300030336|Ga0247826_11252658Not Available596Open in IMG/M
3300031152|Ga0307501_10006596All Organisms → cellular organisms → Bacteria1756Open in IMG/M
3300031152|Ga0307501_10033197All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300031858|Ga0310892_10789743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria658Open in IMG/M
3300031901|Ga0307406_12043825All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300031938|Ga0308175_102558682All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300031939|Ga0308174_10760076Not Available812Open in IMG/M
3300031996|Ga0308176_11035317All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300033551|Ga0247830_11459203Not Available547Open in IMG/M
3300034268|Ga0372943_0076058All Organisms → cellular organisms → Bacteria1929Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil14.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.18%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.27%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere6.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.45%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.45%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.45%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.55%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.73%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.82%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.82%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.91%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.91%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.91%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.91%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J14111_1002666123300001305SoilMVPFMLVDTPDDRYRGQPGPSWRRVLRLLAAAVACFVVGAVVLPWIGFLLDIVAVALVLLALCALDE*
C688J14111_1010260123300001305SoilMVPFMLVETPDDRYRGQPGPSWRRVLRLLAAAVACFVVGAVVLPWMGFLFDIGAVVLILLALCALDG*
C688J18823_1075390413300001686SoilMIPLMLVDTPDDRYRGRPGPSWRRVLRLLAAAVACFFTGAVLLPWVGFLFDIAAVVLVLLALCALDD*
C688J35102_11941849913300002568SoilMVPFMLVDTHDDRYHGGRPGPSWRRPLRLLAAAVACFVTGAVLLPWVGFLFDIAAVVLVLLALCALDD*
C688J35102_11969728613300002568SoilMFALMLIDTPDDRYRGGRPERSWRRVLRLLAGAVACFLAGALLLPWIGFLLDIAAVVLVLLALCALDD*
C688J35102_12005134223300002568SoilMFALMLVDTPDDRYRDHRSGTPWRRVLRLIAAAVACFLVGAFVLPWVGFLLDIGAVVLVLLA
C688J35102_12047497423300002568SoilMVPFMLVDTPDDRYRGQPGPSWRRVLRLLAAAVACFVVGAVVLPWIGFVFDIGAVVLVLLALCALDD*
C688J35102_12047933723300002568SoilMFPLMLIDTPDERYRDRPERSWRRVLRLLASATACFVVGALVLPWIGFVFDIAAVALVLLALCALDD*
C688J35102_12058211113300002568SoilMVPFMLVDTSDDRYRGQPGPSWRRVLRLLAAAVACVFVGAVLLPWIGFLFDIGAVVLVLLALCALDD*
C688J35102_12068439223300002568SoilMFALMLVDTPDDRYRDHQSGTPWRRVLRLIAAAVACVLVGAFLLPWVGFVLDIGAVVLVLLALWALDD*
C688J35102_12073492823300002568SoilMLPLMLVDTPDDRYRGRPGSPWGRVLRLLAGAVACFLVGAFILPWVGFLLDIGAVVLVLLALYAFDDG*
C688J35102_12084637523300002568SoilMFALMLVDTPDDRYRDHQSGTPWRRVLRLLAGAVACFVAGAFILPWVGFLLDIGAVVLVLLALCALDD*
Ga0063454_10050071223300004081SoilMLPLMLIDTPDERYRGRPERSWRRVLRLLAAAVACFILGAVILPWVGFLLDIGAV
Ga0063454_10054921313300004081SoilMVPFMLVDTPDDRYRGQPGPSWRRVLRLLAAAVALFVIGAVVLPWVGFLFDVGAVVLVLLALCALDD*
Ga0063454_10110425423300004081SoilMVPFMLVETPDDRYRGQPGPSWRRVLRLLAAAVACFFVGAVVLPWVGFLFDIVAVVLVLLALCALDD*
Ga0063455_10074515323300004153SoilMVPFMLVDTHDDRYHGGRPGPSWRRPLRLLAAAVACFVTGAVLLPWVGFLFDIAAVVL
Ga0062589_10072904723300004156SoilMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWIGFVLDIGAVVLVLLALYAFDDG*
Ga0063356_10570808713300004463Arabidopsis Thaliana RhizosphereSVTFGPAAMFPLMLVDTPDDRYRDRPGPSWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0062591_10115013523300004643SoilMVPFMLVETPDDRYRGQPGTPWRRFLRLLAAAAACFFVGAVVLPFVGFLFDIGAVVLVLLALCALDD*
Ga0062594_10225277113300005093SoilMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0070658_1100392423300005327Corn RhizosphereMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLLGAFILPWVGFVLDIGAVVLVLLALCALDDV*
Ga0070658_1189489113300005327Corn RhizosphereMFPLMLVDTPDDLYRDRPGPSWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0070683_10014475213300005329Corn RhizosphereMLALMLVDTHEDRYRGRPGSPWRRILRLLAGALACFLLGAFILPWVGFVLDIGAVVLVLLALCALDDV*
Ga0070670_10024866023300005331Switchgrass RhizosphereMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWLGFLLDIGSVVLVLLALCALDD*
Ga0070670_10028961823300005331Switchgrass RhizosphereMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWVGFVLDIGAVVLVLLALYALDDV*
Ga0070682_10031860213300005337Corn RhizosphereMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0070682_10134006413300005337Corn RhizospherePAAMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0070660_10128231213300005339Corn RhizospherePAAMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVVCFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0070691_1049484913300005341Corn, Switchgrass And Miscanthus RhizosphereMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALC
Ga0070668_10033642323300005347Switchgrass RhizosphereLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0070674_10019846623300005356Miscanthus RhizosphereMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVVCFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0070710_1006967333300005437Corn, Switchgrass And Miscanthus RhizosphereIAAMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0070678_10015478233300005456Miscanthus RhizosphereMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0070681_1182072523300005458Corn RhizosphereYRGRPGSPWRRVLRLLAGALACFLLGAFILPWVGFVLDIGAVVLVLLALCALDDV*
Ga0070693_10044399223300005547Corn, Switchgrass And Miscanthus RhizosphereMFPLMLLDTPDDRYRDRPGSSWRRVLRLLCGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0068855_10092405713300005563Corn RhizosphereMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVL
Ga0068857_10007567933300005577Corn RhizosphereMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWVGFVLDIGAVVLVLLALCALDDV*
Ga0068854_10117441123300005578Corn RhizosphereMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVL
Ga0070702_10043094713300005615Corn, Switchgrass And Miscanthus RhizosphereMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWVGFVLDIGAV
Ga0068866_1007871013300005718Miscanthus RhizosphereMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLAL
Ga0068866_1038773223300005718Miscanthus RhizosphereMLIDAPDDRYGGRPERSWRRVLRLLGAAIACFVAGAVILPVVGFLLDIGAVVFVLLALCALDD*
Ga0068851_1020564923300005834Corn RhizosphereRPNPTLGKLGDLGDPWAPAAMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0068870_1024625013300005840Miscanthus RhizosphereTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWVGFVLDIGAVVLVLLALYALDDV
Ga0079222_1209278513300006755Agricultural SoilRPAARATLGPMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLLGAFILPWVGFVLDIGAVVLVLLALCALDDV*
Ga0075428_10118332923300006844Populus RhizosphereSRRCTRAVRSGFAAGRRARRSKLIAAPAMVPFMLVDTPDDRYRGQPGPSWRRVLRLLAAAVACFIIGAVVLPWVGFLFDIGAVVLVLLALCALDG*
Ga0075425_10043407923300006854Populus RhizosphereRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0075425_10280012013300006854Populus RhizosphereMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLLGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0075429_10107092723300006880Populus RhizosphereMVPFMLVDTPDDRYRGQPGPSWRRVLRLLAAAVACFIIGAVVLPWVGFLFDIGAVVLVLLALCALDG*
Ga0075426_1132686413300006903Populus RhizosphereMFPLMLVDTPDDRYRDRPGRSWRRVLRLLAGAVVCFLVGALLLPRVGFLLDIGSVVLVLLALCALDD*
Ga0105240_1043161623300009093Corn RhizosphereMFPLMLVDTPDDRYRDRPGPAWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0111539_1226332113300009094Populus RhizosphereMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWVGFVLDIGAVVLVLL
Ga0111539_1314982113300009094Populus RhizosphereMFPLMLVDTPDDRYRDRPGPSWRRVLRLLAGAVACFLVGALVLPWVGFLLDIGSVVLVLLALCALDD*
Ga0105245_1152647313300009098Miscanthus RhizosphereMFELMLVDTPDDRYRGHQPGTPWRRVLRLLAAAVACFLAGAFILPWVGFLLDIGSVVLVLLALCALDD*
Ga0105245_1177102923300009098Miscanthus RhizosphereMLPLMLIDTPDERYRGRPERSWRRVLRLLGAAVACFIAGAVILPVVGFLLDIGAVVFVLLALCALDD*
Ga0105242_1059714513300009176Miscanthus RhizosphereMLPLMLIDAPDDRYGGRPERSWRRVLRLLGAAIACFVAGAVILPVVGFLLDIGAVVFVLLALCALDD*
Ga0134124_1054474813300010397Terrestrial SoilMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLAL
Ga0134122_1097112323300010400Terrestrial SoilMVPFMLVETPDDRYRGQPGPSWRRSLRLLAAAVACFVVGAVVLPWVGFLFDIGAVVLVLLALCALDD*
Ga0105246_1090194913300011119Miscanthus RhizosphereDTAWHAARATPGPMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWVGFVLDIGAVVLVLLALYALDDV*
Ga0157302_1034202713300012915SoilMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWIGFVLDIGAVVLVLLALCALDDG*
Ga0164301_1103261113300012960SoilMFPLMLLDTPDDRYRDRPGPAWRRVLRLLVGAVACFLVGALLLPWVGFLLDVGSVVLVLLALCALDD*
Ga0164302_1004673423300012961SoilMFPLMLVDTPDDRYRDRPGPSWRRVLRLLAGAVACFLVGALLLPWVGFLLDVGSVVLVLLALCALDD*
Ga0164307_1034698823300012987SoilMFPLMLVDTPDDRYRDRPGPSWRRVLRLLCGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0157369_1226587513300013105Corn RhizosphereMLPLMLVDTPDDRYRGRPGSPWGRVLRLLAGAVACFLVGAFILPWVGFVLDIGAVVLVLLALCALDDV*
Ga0163163_1041872823300014325Switchgrass RhizosphereVTLADHPQVTAAMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0163163_1122439713300014325Switchgrass RhizosphereARATPGPMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLLGAFILPWVGFVLDIGAVVLVLLALYALDDV*
Ga0157380_1087750313300014326Switchgrass RhizosphereAPAAMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0157376_1032098423300014969Miscanthus RhizosphereMVPFMLVETPDDRYRGRPGPSWRRVLRLLAAAVACFFVGAVVLPWIGFVFDIGAVVLVLLALCALDD*
Ga0132256_10073982823300015372Arabidopsis RhizosphereMFPLMLVDTPDDRYRDRPGPSWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD*
Ga0132257_10173194113300015373Arabidopsis RhizosphereMFPLMLVDTPDDRYRDRPGPSWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALC
Ga0132255_10449931423300015374Arabidopsis RhizosphereMVPFMLVETPDDRYRGQPGPSWRRVLRLLAAAVVCFFIGAVVLPFVGFLFDIGAVVLVLLALCALDD*
Ga0163161_1127696323300017792Switchgrass RhizosphereMVPFMLVETPDDRYRGQPGTPWRRFLRLLAAAAACFFVGAVVLPFVGFLFDIGAVVLVLLALCALDD
Ga0163161_1148778813300017792Switchgrass RhizosphereMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0163161_1149973623300017792Switchgrass RhizosphereMLPLMLIDTPDERYRGRPERSWRRVLRLLGAAVACFIAGAVILPVVGFLLDIGAVVFVLLALCALDD
Ga0173481_1023377313300019356SoilPFMLVETPDDRYRGQPGTPWRRFLRLLAAAAACFFVGAVVLPFVGFLFDIGAVVLVLLALCALDD
Ga0207656_1007421723300025321Corn RhizosphereADRPNPTLGKLGDLGDPWAPAAMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0207692_1023665413300025898Corn, Switchgrass And Miscanthus RhizosphereSIAAMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0207642_1049689323300025899Miscanthus RhizosphereMLIDAPDDRYGGRPERSWRRVLRLLGAAIACFVAGAVILPVVGFLLDIGAVVFVLLALCALDD
Ga0207642_1063567213300025899Miscanthus RhizosphereMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCAL
Ga0207688_1001767623300025901Corn, Switchgrass And Miscanthus RhizosphereMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVVCFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0207643_1021557433300025908Miscanthus RhizosphereMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWVGFVLDIGAVVLVLLALYALDDV
Ga0207705_1092842523300025909Corn RhizosphereMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLLGAFILPWVGFVLDIGAVVLVLLALCALDDV
Ga0207663_1035163213300025916Corn, Switchgrass And Miscanthus RhizosphereLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0207662_1000594953300025918Switchgrass RhizosphereMFPLMLLDTPDDRYRDRPGSSWRRVLRLLCGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0207650_1039309123300025925Switchgrass RhizosphereMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWLGFLLDIGSVVLVLLALCALDD
Ga0207650_1057135423300025925Switchgrass RhizosphereMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWVGFVLDIGAVVLVLLALYALDDV
Ga0207690_1132173823300025932Corn RhizosphereMLALMLVDTHDDRYRGRPGSPWRRVLRLLAGALACFLVGAFILPWVGFVLDIGAVVLVLLALCALDDV
Ga0207709_1082883613300025935Miscanthus RhizosphereMFELMLVDTPDDRYRGHQPGTPWRRVLRLLAAAVACFLAGAFILPWVGFLLDIGSVVLVLLALCALDD
Ga0207689_1006819143300025942Miscanthus RhizosphereDPREQQRPDEEARDRPGSSWRRVLRLLCGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0207661_1019131123300025944Corn RhizosphereMLALMLVDTHEDRYRGRPGSPWRRILRLLAGALACFLLGAFILPWVGFVLDIGAVVLVLLALCALDDV
Ga0207712_1015713613300025961Switchgrass RhizosphereMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCA
Ga0207668_1086446413300025972Switchgrass RhizosphereAMFPLMLVDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0207702_1137361613300026078Corn RhizosphereMFPLMLLDTPDDRYRDRPGPSWRRVLRLLVGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0207675_10272240013300026118Switchgrass RhizosphereAARAGFGAGRWTRRGKLIPAPAMVPFMLVETPDDRYRGQPGTPWRRFLRLLAAAAACFFVGAVVLPFVGFLFDIGAVVLVLLALCALDD
Ga0207428_1073860023300027907Populus RhizosphereMFPLMLVDTPDDRYRDRPGPSWRRVLRLLAGAVACFLVGALVLPWVGFLLDIGSVVLVLLALCALDD
Ga0247818_1023242923300028589SoilMLPLMLIDTPDERYRGRPERSWRRVLRLLGAAVACFIAGAVILPVVSFLLDICAVVFVLLALCALDD
Ga0247823_1140144323300028590SoilVGRSAAMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0247819_1101290013300028608SoilPWAPAAMFPLMLVDTPDDRYRDRPGPAWRRVLRLLAGAVVCFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0307276_1011760723300028705SoilMVPFMLVDTPDDRYRGQPGPPWRRALRLLAAAVVCFVTGAVLLPWVGFVLDIAAVVLALLALCALDD
Ga0307284_1048147823300028799SoilRCTRAARAGFAAGRRTRRGKLIPAPAMVPFMLVETPDDRYRGQPGTPWRRVLRLLAAAVACFFVGAVVVPIVGFLFDIAAVVLVLLALCALDD
Ga0247825_1028853223300028812SoilMVPFMLVDTPDDRYRGQPGTPWRRFLRLLAAAAACFFVGAVVLPFVGFLFDIGAVVLVLLALCALDD
Ga0247826_1125265813300030336SoilMFPLMLIDTPDERYGDRRGPSWGHVLKLLAGAVACFLVGALILPWIGFLLDVGAVVLVL
Ga0307501_1000659633300031152SoilMVPFMLVETPDDRYRGQPGPSWRRVLRLLAAAVACFFVGAVVLPWVGFLFDIGAIVLVLLALCALDD
Ga0307501_1003319723300031152SoilMVPFMLVDTPDDRYRGRPGPSWRRVLRLLAVAVACFFVGALVLPWVGFLFDIASVVLVLLALCALDD
Ga0310892_1078974323300031858SoilMFPLMLVDTPDDRYRDRPGPSWRRVLRLLAGAVACFLVGALLLPWVGFLLDIGSVVLVLLALCALDD
Ga0307406_1204382523300031901RhizosphereRRGRHGVRGVSSAGRRMFPFMLIDTPDDRYRGPPGPSWRRVLRLLVGAVACFLIGALLVPFAGYLFQIAAVTLVLVAISMLD
Ga0308175_10255868223300031938SoilMVPFMLVDSPDDRYRGQPGPSWRRPLRLLAAALACFVVGAVVLPWVGFIFDIGSVVLVLLALCALDD
Ga0308174_1076007623300031939SoilDDRYRGHDRGTPWGRVVRLLAAAVACFLAGAFILPWVGFLLDIGSVVLVLLALCALDD
Ga0308176_1103531723300031996SoilMVPFMLVETPDDRYRGQPGPSWRRVLRLLAAAVACFFVGAVVLPFVGFLFDIGAVVLVLLALCALDD
Ga0247830_1145920323300033551SoilAGRWTRRGKLIPAPAMVPFMLVETPDDRYRGQPGTPWRRFLRLLAAAAACFFVGAVVLPFVGFLFDIGAVVLVLLALCALDD
Ga0372943_0076058_960_11633300034268SoilMVPFMLVDTPDDRYRGRPGPSWRRVLRLLAAAVACFVIGAVLLPWVGFLFDIASVVLVLLAVCALDG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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