Metagenome / Metatranscriptome Family F086915

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086915
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	112 residues
Representative Sequence	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGKKKPT
Number of Associated Samples	92
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.82 %
% of genes near scaffold ends (potentially truncated)	40.91 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.091 % of family members)
Environment Ontology (ENVO)	Unclassified (42.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.44% β-sheet: 6.94% Coil/Unstructured: 48.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00392	GntR	40.00
PF01274	Malate_synthase	14.55
PF07729	FCD	11.82
PF00133	tRNA-synt_1	4.55
PF00463	ICL	2.73
PF10431	ClpB_D2-small	1.82
PF08245	Mur_ligase_M	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2225	Malate synthase	Energy production and conversion [C]	14.55
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	11.82
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	11.82
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.55
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.55
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.55
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	4.55
COG2224	Isocitrate lyase	Energy production and conversion [C]	2.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.18 %
Unclassified	root	N/A	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	87.27 %
Unclassified	root	N/A	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	80.91 %
Unclassified	root	N/A	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	77.27 %
Unclassified	root	N/A	1.82 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	77.27 %
Unclassified	root	N/A	1.82 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10005597	All Organisms → cellular organisms → Bacteria	3471	Open in IMG/M
3300001305\|C688J14111_10172897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300001686\|C688J18823_10030331	All Organisms → cellular organisms → Bacteria	3693	Open in IMG/M
3300002568\|C688J35102_120933104	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2529	Open in IMG/M
3300004081\|Ga0063454_100973257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300004153\|Ga0063455_100732537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300005172\|Ga0066683_10889057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300005176\|Ga0066679_10130196	All Organisms → cellular organisms → Bacteria → Proteobacteria	1559	Open in IMG/M
3300005179\|Ga0066684_10734985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300005181\|Ga0066678_10728216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300005184\|Ga0066671_10757084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300005186\|Ga0066676_10021029	Not Available	3414	Open in IMG/M
3300005187\|Ga0066675_10081428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2090	Open in IMG/M
3300005336\|Ga0070680_100114147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2250	Open in IMG/M
3300005341\|Ga0070691_10394175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300005363\|Ga0008090_13546937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300005530\|Ga0070679_100099870	All Organisms → cellular organisms → Bacteria	2889	Open in IMG/M
3300005540\|Ga0066697_10428910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300005553\|Ga0066695_10160967	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300005556\|Ga0066707_10312340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300005558\|Ga0066698_10207119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1343	Open in IMG/M
3300005563\|Ga0068855_102492654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300005575\|Ga0066702_10536179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300005576\|Ga0066708_10249529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1128	Open in IMG/M
3300005587\|Ga0066654_10031565	All Organisms → cellular organisms → Bacteria	2216	Open in IMG/M
3300005598\|Ga0066706_10825174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300005764\|Ga0066903_100283252	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300005764\|Ga0066903_100698533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1787	Open in IMG/M
3300005764\|Ga0066903_100812436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1675	Open in IMG/M
3300005764\|Ga0066903_101755842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1183	Open in IMG/M
3300005764\|Ga0066903_106279221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300005764\|Ga0066903_108102058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300005764\|Ga0066903_108279236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300005898\|Ga0075276_10043390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300006028\|Ga0070717_10127915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2182	Open in IMG/M
3300006032\|Ga0066696_10578097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300006794\|Ga0066658_10889635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300006796\|Ga0066665_11002639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300006797\|Ga0066659_11234565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300007788\|Ga0099795_10226677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300009012\|Ga0066710_100794333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1450	Open in IMG/M
3300009137\|Ga0066709_100368784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1980	Open in IMG/M
3300009143\|Ga0099792_10555218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300010043\|Ga0126380_11646936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300010048\|Ga0126373_11581994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300010132\|Ga0127455_1148677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300010147\|Ga0126319_1404492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300010322\|Ga0134084_10222905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300010323\|Ga0134086_10257761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300010325\|Ga0134064_10364924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300010337\|Ga0134062_10247241	Not Available	828	Open in IMG/M
3300010337\|Ga0134062_10601402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300010362\|Ga0126377_10721926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300010366\|Ga0126379_13593736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300010376\|Ga0126381_100096049	All Organisms → cellular organisms → Bacteria	3771	Open in IMG/M
3300010376\|Ga0126381_102499997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300010376\|Ga0126381_103371260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300010398\|Ga0126383_12183939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300012198\|Ga0137364_10235023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1351	Open in IMG/M
3300012201\|Ga0137365_10135281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1853	Open in IMG/M
3300012207\|Ga0137381_10285339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1437	Open in IMG/M
3300012208\|Ga0137376_10041319	All Organisms → cellular organisms → Bacteria	3727	Open in IMG/M
3300012209\|Ga0137379_10777449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300012209\|Ga0137379_10782349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300012211\|Ga0137377_11589566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300012212\|Ga0150985_110402948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1350	Open in IMG/M
3300012212\|Ga0150985_118185314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300012356\|Ga0137371_10016219	All Organisms → cellular organisms → Bacteria	5720	Open in IMG/M
3300012357\|Ga0137384_10510760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300012378\|Ga0134025_1173021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300012405\|Ga0134041_1386142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300012409\|Ga0134045_1126135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300012469\|Ga0150984_119376267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300012683\|Ga0137398_10238245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1209	Open in IMG/M
3300012948\|Ga0126375_10575090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	855	Open in IMG/M
3300012971\|Ga0126369_11967103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300014150\|Ga0134081_10304872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300014157\|Ga0134078_10113470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1028	Open in IMG/M
3300014166\|Ga0134079_10153922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300015356\|Ga0134073_10303242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300015357\|Ga0134072_10034908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1332	Open in IMG/M
3300015357\|Ga0134072_10182541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300016371\|Ga0182034_11772137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300016422\|Ga0182039_11031003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	739	Open in IMG/M
3300018468\|Ga0066662_11308285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300018482\|Ga0066669_10284426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1331	Open in IMG/M
3300021560\|Ga0126371_10513629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1347	Open in IMG/M
3300021560\|Ga0126371_10598375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1252	Open in IMG/M
3300022467\|Ga0224712_10651560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300025917\|Ga0207660_10371243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1149	Open in IMG/M
3300025920\|Ga0207649_10916578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300025921\|Ga0207652_10717647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300026300\|Ga0209027_1155110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300026324\|Ga0209470_1355989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300026536\|Ga0209058_1361990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300031723\|Ga0318493_10110353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1390	Open in IMG/M
3300031744\|Ga0306918_10491688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300031747\|Ga0318502_10188290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1190	Open in IMG/M
3300031751\|Ga0318494_10779354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300031860\|Ga0318495_10264933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	768	Open in IMG/M
3300031938\|Ga0308175_100000512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26558	Open in IMG/M
3300031938\|Ga0308175_100026544	All Organisms → cellular organisms → Bacteria	4719	Open in IMG/M
3300031938\|Ga0308175_102529295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300031939\|Ga0308174_10119520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1919	Open in IMG/M
3300031939\|Ga0308174_10524502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	972	Open in IMG/M
3300032001\|Ga0306922_11174666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300032091\|Ga0318577_10234354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300032261\|Ga0306920_102656119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300032261\|Ga0306920_102734349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300033290\|Ga0318519_10631124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.45%
Host-Associated	Host-Associated	4.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.55%
Plants	Host-Associated → Plants	4.55%
Aquatic	Environmental → Aquatic	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Freshwater	Environmental → Aquatic → Freshwater	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.36%
Loam	Environmental → Terrestrial → Soil → Loam	17.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.36%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.91%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.82%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.91%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005898	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_405	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012378	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_100055973	3300001305	Soil	LADNGSDSSATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDEACQEWVTLPVTSYEALQRADEPILAPGHALSDGQKSRRKARRLVDDAKALEAQAEVQVKRAKRNVRKKDPG*
C688J14111_101728971	3300001305	Soil	PLADNRSDSSGTRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDDSCQEWVTLPVERYETLQRNDEPILAPGHTLSQPEKTRRKARRLVDDAKALEAQAGVQVNRAKRNLRKKKPT*
C688J18823_100303314	3300001686	Soil	LADNRSDSSGTRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDDSXQEWVTLPVERYETLQRNDXPILAPGHTLSQPEKSRRKARRLVDDAKALEAQADVQVNRAERNLRKKKPT*
C688J35102_1209331043	3300002568	Soil	LADKRSESTATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDDGCQEWVTLPVAKYEALQRSDQPILASGHTLSDGQKSRRKARRLVDDAKALEAQADVQLKRAKRNAGRQEPS*
Ga0063454_1009732572	3300004081	Soil	LADNRTDSTATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDASCQEWVTLPVKRYETLQRTDQPILAPGHTLSQPERTRRKARRLVDDARALEAQADVQVNRAKRNVRNRKPT*
Ga0063455_1007325371	3300004153	Soil	MRMAVKRFDLSESDGEAWAFLCECGDEACQEWVTLPVASYEALQRADEPILAPGHALSDGQKSRRKARRLVDDAKALEAQADVQVKRAKRNVRKKDPG*
Ga0066683_108890571	3300005172	Soil	MGVSFLPSIWSWGGHLADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAQRNLGKKKPT*
Ga0066679_101301963	3300005176	Soil	MRMAVKRFDLSEIDGEALAFLCECGDDSCQEWVTLPVERYETLQRLDQPILAPGHTLSQPEKTRRRARRLVDDAQALEAQADVQVNRAERNLGKKKPS*
Ga0066684_107349852	3300005179	Soil	MADNQTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRLDQPILAPGHTLRQPEKTRRRARRLVDDAQALEAEADVQVNRAKRNLGTKKPS*
Ga0066678_107282161	3300005181	Soil	WGGHLADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTGQPILAPGHALSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGKKKPT
Ga0066671_107570842	3300005184	Soil	NRQMRMAVKRFDLSESDGEAWAFLCECGDDACQEWVTLPVARYEALQRADEPILAPGHALSDGQKSRRKARRLVDDAKALEAQAEVQVTRAKRNVRKNGPG*
Ga0066676_100210294	3300005186	Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAQRNLGKKKPT*
Ga0066675_100814281	3300005187	Soil	MADNQTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTGQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRA
Ga0070680_1001141472	3300005336	Corn Rhizosphere	MRMAVEPFDLSESDAESWAFLCECGDAGCQEWITLPVTTYEARQRADQPILAPGHTLSEPQKSRRKARRLVDDAKALEAQAELQLKRAKRNAKKPKPS*
Ga0070691_103941751	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRMAVERFDLSESDAESWAFLCECGDAGCQEWITLPVTTYEARQRADQPILAPGHTLSEPQKSRRKARRLVDDAKALEAQAELQLKRAKRNAKKPKPS*
Ga0008090_135469372	3300005363	Tropical Rainforest Soil	LADKRSDTTETRKELNRQMRLAVKRFDLSESDGESWAFLCECGDDHCQEWVTLPVKEYEALQRADQPILAQGHTLSEPQKTRRKARRLVDDAKALE
Ga0070679_1000998703	3300005530	Corn Rhizosphere	MRMAVERFDLSESDAESWAFLCECGDAGCQEWITLPVTTYEARQRADQPILAPGHTLSEPQKSRRKARRLVDDAKALEAQADLQLKRATRNAKKPKPS*
Ga0066697_104289101	3300005540	Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTGQPILAPGHALSQPEKARRKTRRLVDDAQALEAQADVQVNRAKRNLGKKKPT*
Ga0066695_101609673	3300005553	Soil	PSIWSWGGHLADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRQARRLVDDAQALEAQADVQVNRAQRNLGKKKPT*
Ga0066707_103123401	3300005556	Soil	SANGTTTTNEAYPSPGPLGRGKGALADKRTESSATRKELNRQVRMAVKRFDLSVSEGETWAFLCECGDDVDCQEWVTLPVAEYEALQRADQPILAPGHTLSAPQKSRRQARRLVDDAIALEAQADVQVKRAQRNVGKKKPF*
Ga0066698_102071193	3300005558	Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTGQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGKKKPT*
Ga0068855_1024926541	3300005563	Corn Rhizosphere	MRMAVERFDLSESDAESWAFLCECGDAGCQEWITLPVTTYEARQRADQPILAPGHTLSEPQKSRRKARRLVDDAKALEAQADLQLKRAKRNAKKPKPS*
Ga0066702_105361793	3300005575	Soil	MADNQTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRLDQPILAPGHTLSQPEKTRRRARRLVDDAQALEAEADVQVNRAKRNLGTKKPS*
Ga0066708_102495293	3300005576	Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHALSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGNKKPT*
Ga0066654_100315653	3300005587	Soil	LADNGTDSSATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDEACQEWVTLPVASYEALQRADEPILAPGHALSDGQKSRRKARRLVDDAKALEAQAEVQVKRAKRNVRKKDPG*
Ga0066706_108251741	3300005598	Soil	MADNQTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRLDQPILAPGHTLSQPEKTRRRARRLVDDAQALEAEADVQVNRAKRNLGKKKPS*
Ga0066903_1002832522	3300005764	Tropical Forest Soil	VGDKRTESTMTRKELNRQMRMAVNRFDLSETDGESWAFLCECGDEDCQEWVTLPVQRYEALQRADRPILAPGHMLSEPQKARRQARRLVDDAKALEAQADVQIKRAKRNLGGSEPN*
Ga0066903_1006985333	3300005764	Tropical Forest Soil	LADERSESSATRKELNRQMRMAVKRFDLSESDGESWAFLCECGDYECQEWVTLPVRKYEALQRADQPILAPGHTLSEPQKTRRRARRLVDDAKALQAQAAVQAKRAKRNVEKKQT*
Ga0066903_1008124362	3300005764	Tropical Forest Soil	MDSTATRKELNRNVRMAVNRFDLAGLGDDAWDFLCECGADECQEWVTLRVEQYEALQRADEPILAPGHTLSQVQRSRRRARRLVDDARALEAQAEHQVKRARRNLRNSQPS*
Ga0066903_1017558423	3300005764	Tropical Forest Soil	LAEKRTDSSAARKELNRQMRIAVERFDLSESDGETWAFLCECGDDLCQEWVTLPVAEYEALQRADQPILAHGHMLSAPQKSRRQARRLVDDAKALEAQADVQVKRAKRNVEERKPT*
Ga0066903_1062792211	3300005764	Tropical Forest Soil	LASKRSESSATRAELNRQIRTAVKRFDLSDRTEDTWAFLCECGADGCQEWVTMPLTAYEELHRADEPILAPGHTVSRGEKARRRARRLADDAHALQAQAEQQVKRSRRNLQDEDPPR*
Ga0066903_1081020582	3300005764	Tropical Forest Soil	LPDNRSENSATRKELNRQMRLAVERFDLSEEEGETWAFLCECGDYECQEWVTLPVVRYEVLQRADQPILAPGHTLSEPQRTRRRARRLVDDAKALEAQADVQFKR
Ga0066903_1082792362	3300005764	Tropical Forest Soil	KELNRQMRMAVKRFDLSESDSETWAFLCECGDDRCQEWVTLPVVRYEALQRSDQPILAPGHTLTEPQKSRRRARRLVDDAKALEAEADIQIKRAKRNLGQTSG*
Ga0075276_100433901	3300005898	Rice Paddy Soil	TRKELNRQMRMAVKRFDLSETEGETWAFLCECGDDACQEWVTLPVARYEALQRSGEPILSPGHSLSSSQRSRRQARRLVDDAKALEAQANLQVERAARNLEKRPT*
Ga0070717_101279153	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAGKQSDSSATRKELNRQMRMAVKRFDLSESDGESWAFLCECGDDTCQEWVTLPVGNYEALQRSDQPILAPGHTLTEPQKTRRNARRLVDDAKALEAEADIQVKRAKRNLRGKQKPT*
Ga0066696_105780973	3300006032	Soil	MADNQTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRLDQPILAPGHTLSQPEKTRRRARRLVDDAQALEAQADVQVDRAKRNLGKKKPS*
Ga0066658_108896351	3300006794	Soil	LADRRSESSATRKELNRQMRIAVERFDVSESDGETWAFLCECGDDQCQEWVTLPVASYEALQRADEPILAPGHALSDGQKSRRKARRLVDDAKALEAQAEVQVKRAKRNVRKKDPG*
Ga0066665_110026391	3300006796	Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRLDQPILAPGHTLSQPEKTRRRARRLVDDAQALEAQADVQVNRAKHNLGKKKPS*
Ga0066659_112345651	3300006797	Soil	SEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGKKKPT*
Ga0099795_102266772	3300007788	Vadose Zone Soil	LAGNRTDSTATRKELNRQMRMAVERFDLSETDGEAWAFLCECGDDSCQEWVTLPVKKYETLQRTDQPILAPGHTLSQPEKTRRKARRLVDDAKALDAQADVQVNRAKRNLGKNKPT*
Ga0066710_1007943333	3300009012	Grasslands Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGNKKPT
Ga0066709_1003687843	3300009137	Grasslands Soil	MADNQTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTGQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAQRNLGKKKPT*
Ga0099792_105552183	3300009143	Vadose Zone Soil	LAGNQTDSTATRKELNRQMRMAVERFDLSETDGEAWAFLCECGDDSCQEWVTLPVKRYETLQRTDQPILSPGHTLSQPEKTRRKARRLVDDAKALDAQADVQVNRAKRNLGKNKPT*
Ga0126380_116469361	3300010043	Tropical Forest Soil	MVHSAGEGPLPDKRSESSATRKELNRQMRMAVKRFDLSESDGESWAFLCECGDENCLEWITLPVKKYEALQRADQPILAPGHTLSEPQKTRRQARRLVDDAKALEAQADVQVKRAKRNLGGAEPD*
Ga0126373_115819942	3300010048	Tropical Forest Soil	MADQRTDSSAARKELNRQMRMAVERFDLSESDGESWAFLCECGDDLCLEWVTLPAKTYEALQRADQPILAPGHTLTAPQKSRRQARRLVDDAKALEAQADVQVKRAKRNLRGKQKPA*
Ga0127455_11486771	3300010132	Grasslands Soil	LADKRSESTATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDDSCQEWVTLPVERYETLQRADQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNL
Ga0126319_14044921	3300010147	Soil	LTGNRTDSSATRKELNRQMRMAVERFDLSETDGEAWAFLCECGDDTCQEWVTLPVRRYEMLQRTDQPILSPGHTLSQPEKTRRKARRLVDDAKALDAQADVQVNRAKRNLGKNKPT*
Ga0134084_102229051	3300010322	Grasslands Soil	IDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRQARRLVDDAQALEAQADVQVNRAQRNLGKKKPT*
Ga0134086_102577612	3300010323	Grasslands Soil	MGVSFLSSTWSRGGPLADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKSRRKARRLVDDAQALEAQADVQVNRSKRNLGKKKPS*
Ga0134064_103649241	3300010325	Grasslands Soil	QMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRLDQPILAPGHTLSQPEKTRRRARRLVDDAQALEAQADVQVNRAKRNLGKKKPS*
Ga0134062_102472411	3300010337	Grasslands Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDDSCQEWVTLPVERYETLQRADQPILAPGHTLSQPEKSRRKARRLVDDATAL
Ga0134062_106014022	3300010337	Grasslands Soil	LADKRTESSATRKELNRQVRMAVKRFDLSVSEGETWAFLCECGDDVDCQEWVTLPVAEYEALQRADQPILAPGHMLSAPQKSRRQARRLVDDAIALEAQADVQVKRAQRNVGKKKPF*
Ga0126377_107219263	3300010362	Tropical Forest Soil	LADNRTDSSAARKELNRQMRLAVKRFDLSESDGETWAFLCECGDDLCQEWVTLPAARYEALQRADQPILAPGHTLSAPQKSRRRARRLVDDARALQAQADVQAKRAKRNLGKKEPT*
Ga0126379_135937361	3300010366	Tropical Forest Soil	LPDKRTEGSATRKELNRQMRMAVKRFDLSDRDDESWSFLCECGDYECQEWVTLPVARYEALQRADQPILAPGHTLSEPQKTRRRARRLVDDAKALEAQADVQFK
Ga0126381_1000960492	3300010376	Tropical Forest Soil	MRMAVQRFDLSESDAEMWAFLCECGDDHCQEWVTLPVKEYEAMQRSDQPILAPGHTLSGPEKTRRKARRLVDDAKALEAQADVQVKRAKRNLGKKKPT*
Ga0126381_1024999972	3300010376	Tropical Forest Soil	MRIAVQRFDLSESDAEMWAFLCECGDDHCQEWVTLPVKQYEAMQRGDQPILAPGHTLSEPQKTRRKARRLVDDAKALEAEADVQVKRAKRNLGKKKPT*
Ga0126381_1033712601	3300010376	Tropical Forest Soil	AVQRFDLSESDAEMWAFLCECGDDHCQEWVTLPVKQYETMQRADQPILAPGHTLSEPQKTRRKARRLVDDARALEAQADVQVKRAKRNLGKKKPT*
Ga0126383_121839391	3300010398	Tropical Forest Soil	KRFDLSESDGESWAFLCECGDENCLEWITLPVKKYEALQRADQPILAPGHTLSEPQKTRRQARRLVDDAKALEAQADVQVKRAKRNLGGAEPD*
Ga0137364_102350233	3300012198	Vadose Zone Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGKKKPT*
Ga0137365_101352812	3300012201	Vadose Zone Soil	MGVSFLTSIWSWGGHLADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAKRSLGKKKPT*
Ga0137381_102853391	3300012207	Vadose Zone Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDDAQALEAQAD
Ga0137376_100413193	3300012208	Vadose Zone Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDEAQALEAQADVQVNRAKRSLGKKKPT*
Ga0137379_107774492	3300012209	Vadose Zone Soil	MGVSFLTSIWSWGGHLADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGKKKPT*
Ga0137379_107823493	3300012209	Vadose Zone Soil	VVVPGGALAVKRTESSATRKELNRQMRMAVKRFDLSESDGETWAFLCECGDDDCQEWVTLPVRQYEALQRADEPILAPGHELSGPQKTRRQARRLVDDARALEAQADVQVNRAKRNLGEN
Ga0137377_115895662	3300012211	Vadose Zone Soil	WGGHLADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTGQPILAPGHTLSQPEKARRKARRLVDDAKALDAQADVQVNRAKRNLGKNKPT
Ga0150985_1104029482	3300012212	Avena Fatua Rhizosphere	MAVKRFDLSESDGEAWAFLCECGDASCQEWVTLPVKRYETLQRTDQPILAPGHTLSQPERTRRKARRLVDDARALEAQADVQVNRAKRNVRKKKPT*
Ga0150985_1181853142	3300012212	Avena Fatua Rhizosphere	MAVKRFDLSESDGEAWAFLCECGDDSCQEWVTLPVERYETLQRNDQPILAPGHTLSQPEKSRRKARRLVDDAKALEAQADVQVNRAERNLRKKKPT*
Ga0137371_100162193	3300012356	Vadose Zone Soil	LADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSEPEKTRRKARRLVDDAKALDAQADVQVNRAKRNLGKNKPT*
Ga0137384_105107602	3300012357	Vadose Zone Soil	MAVKRFDLSESDGETWAFLCECGDDDCQEWETLPVRQYEALQRADEPILAPGHELSGPQKTRRQARRLVDDARALEAQADVQVNRAKRNLGENEPN*
Ga0134025_11730212	3300012378	Grasslands Soil	LADNGSDSSATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDEACQEWVTLPVASYEALQRADEPILAPGHALSDGQKSRRKARRLVDDAKALEAQAEVQVKRANRNVRKKDPG*
Ga0134041_13861422	3300012405	Grasslands Soil	MGVSFLASTWSWGGALAGNRTDSSATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDDSCQEWVTLPVERYETLQRLDQPILAPGHTLSQPEKTRRRARRLVDDAQALEAQADVQVNRAKHNLGKKK
Ga0134045_11261352	3300012409	Grasslands Soil	MGVSFFSSTWSRGGPLADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTGQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGKKKPT*
Ga0150984_1193762672	3300012469	Avena Fatua Rhizosphere	LADNRSDSSGTRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDDSCQEWVTLPVERYETLQRNDQPILAPGHTLSQPEKSRRKARRLVDDAKALEAQADVQVNRAKRNLRKKKPT*
Ga0137398_102382452	3300012683	Vadose Zone Soil	LAGNRTDSTATRKELNRQMRMAVKRFDLSETDGEAWAFLCECGDDSCQEWVTLPVRRYETLQRTDQPILSPGHTLSQPEKTRRKARRLVDDAKALDAQADVQVNRAKRNLGKNKPT*
Ga0126375_105750903	3300012948	Tropical Forest Soil	MTRQELNRQMRMAVERFDLSESDGESWAFLCECGDEECQEWVTLPIERYEALQRADQPILAPGHTLSEPQKTRRRARRLVDDARALEAQADVQVKRAQRNLGK
Ga0126369_119671033	3300012971	Tropical Forest Soil	MRMAVKRFDLSESDGETWAFLCECGDDHCQEWVTLPVVRYEALQRLDQPILAPGHTLTEPQKSRRRARRLVDDAKALEAEADVQIKRAKRNLGQTSS*
Ga0134081_103048722	3300014150	Grasslands Soil	FDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKTRRRARRLVDDAQALEAEADVQVNRAKRNLGNKKST*
Ga0134078_101134701	3300014157	Grasslands Soil	LADNGSDSSATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDEACQEWVTLPVASYEALQRADEPILAPGHALSDGQKSRRKARRLVDDAKALEAQAEVQVKRANRN
Ga0134079_101539222	3300014166	Grasslands Soil	LADNQTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTGQPILAPGHALSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGKKKPT*
Ga0134073_103032421	3300015356	Grasslands Soil	VKRFDLSVSEGETWAFLCECGDDVDCQEWVTLPVAEYEALQRADQPILAPGHMLSAPQKSRRQARRLVDDAIALEAQADVQVKRAQRNVGKKKPF*
Ga0134072_100349081	3300015357	Grasslands Soil	MGVSFLTSIWSWGGHLADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTGQPILAPGHTLGQPEKARRQARRLVDDAQALEAQADVQVNRAKRNLGKKKPT*
Ga0134072_101825412	3300015357	Grasslands Soil	LADNGSDSSATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDEACQEWVTLPVASYEALQRADEPILAPGHALSDGQKSRRKARRLVDDAKALEAQAEVQVKRAKRNVRKKDPG*
Ga0182034_117721371	3300016371	Soil	DTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILARGHTLSEPQKTRRKARRLVDDAKALEAEADVQVKRAKRNLEKKPS
Ga0182039_110310032	3300016422	Soil	SWRRILPLSTRSWEGPLADKRTDTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILARGHTLSEPQKTRRKARRLVDDAKALEAEADVQVKRAKRNLEKKPS
Ga0066662_113082852	3300018468	Grasslands Soil	ATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRLDQPILAPGHTLSQPEKTRRRARRLVDDAQALEAQADVQVNRAKHNLGKKKPS
Ga0066669_102844262	3300018482	Grasslands Soil	MADNQTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRLDQPILAPGHTLSQPEKTRRRARRLVDDAQALEAQADVQVNRAKRNVGKKKPS
Ga0126371_105136294	3300021560	Tropical Forest Soil	MRMAVQRFDLSESDAEMWAFLCECGDDHCQEWVTLPVKEYEAMQRSDQPILAPGHTLSGPEKTRRKARRLVDDAKALEAQADVQVKRAKRNLGKKKST
Ga0126371_105983752	3300021560	Tropical Forest Soil	LADKRIESSETRKELNRQMRMAVKRFDLSESDGERWAFLCECGACLCLEWVTLPAKTYEALQRADQPILAPGHTLTAPQKSRRQARRLVDDAKALEAQADVQVKRAKRNLRGKQKPA
Ga0224712_106515601	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MRMAVERFDLSESDAESWAFLCECGDAGCQEWITLPVTTYEARQRADQPILAPGHTLSEPQKSRRKARRLVDDAKALEAQAELQLKRAKRNAKKPKPS
Ga0207660_103712431	3300025917	Corn Rhizosphere	TESSATRKELNRQMRMAVKRFDLSENGAESWAFLCECGDAGCQEWITLPVTTYEARQRADQPILAPGHTLSEPQKSRRKARRLVDDAKALEAQAELQLKRAKRNAKKPKPS
Ga0207649_109165782	3300025920	Corn Rhizosphere	MRMAVERFDLSESDAESWAFLCECGDAGCQEWITLPVTTYEARQRADQPILAPGHTLSEPQKSRRKARRLVDDAKALEAQAELQLKRATRNAKKPKPS
Ga0207652_107176471	3300025921	Corn Rhizosphere	CRPGEGLLSDERTESSATRKELSPRMRMAVERFDLSESDAESWAFLCECGDAGCQEWITLPVTTYEARQRADQPILAPGHTLSEPQKSRRKARRLVDDAKALEAQADVQLKRAQRNAKKPKPS
Ga0209027_11551102	3300026300	Grasslands Soil	VVHKRDESSAARAEVNRNLRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTDQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAKRNLGKKNPS
Ga0209470_13559891	3300026324	Soil	IWSWGGHLADNRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDHSCQEWVTLPVERYETLQRTGQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAQRNLGKKKPT
Ga0209058_13619901	3300026536	Soil	NRTDSSATRKELNRQMRMAVKRFDLSEIDGEAWAFLCECGDDSCQEWVTLPVERYETLQRTGQPILAPGHTLSQPEKARRKARRLVDDAQALEAQADVQVNRAQRNLGKKKPT
Ga0318493_101103532	3300031723	Soil	LADKRTDTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILARGHTLSEPQKTRRKARRLVDDARALEAEADVQVRRAKRNLEKKPS
Ga0306918_104916881	3300031744	Soil	PLSTRSWEGLLADKRTDTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILARGHTLSEPQKTRRKARRLVDDAKALEAEADVQVKRAKRNLEKKPS
Ga0318502_101882901	3300031747	Soil	SWRRILPLSTRSWEGLLADKRTDTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILARGHTLSEPQKTRRKARRLVDDARALEAEADVQVRRAKRNLEKKPS
Ga0318494_107793541	3300031751	Soil	LADKRTDTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILARGHTLSEPQKTRRKARRLVDDAKALEAEADVQVKRAKRNLEKKPS
Ga0318495_102649332	3300031860	Soil	RTDTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILARGHTLSEPQKTRRKARRLVDDARALEAEADVQVRRAKRNLEKKPS
Ga0308175_10000051214	3300031938	Soil	LADNRSDSSGTRKELNRQMRMAVKRFDLSESDREAWAFLCECGDDSCQEWVTLPVERYETLQRSDQPVLAPGHTLSQPEKSRRQARRLVDDAKALEAQADVQVNRAKRNLRKKPT
Ga0308175_1000265446	3300031938	Soil	MRMAVKRFDLSENDAESWAFLCECGDDTCQEWITVPVATYEARQRADQPILAPGHTLSEPQKSRRKARRLVDDAKALEAQADVQLKRAERNAKKPKPS
Ga0308175_1025292952	3300031938	Soil	FDLSESDGETWAFLCECGDEGCQEWVTLPVPSYEALQRANEPILAPGHTLSATQKTRRTSRRLVDDAKALEAQADLQVSRAKRNAKQKPS
Ga0308174_101195203	3300031939	Soil	LADKRTESIATRKELNRQMRMAVKRFDLSESDGEAWAFLCECGDDGCQEWVTLPVAKYEALQRSDQPILASGHTLSDGQKSRRKARRLVDDAKALEAQADVQLKRAKRNAGRQKPS
Ga0308174_105245022	3300031939	Soil	ITTTSSATARAYALPVGSAGKGSLPQKRTETSRTRKEVNRQMRMAVKRFDLSESDGETWAFLCECGDEGCQEWVTLPVPSYEALQRANEPILAPGHTLSATQKTRRTSRRLVDDAKALEAQADLQVSRAKRNAKKKPS
Ga0306922_111746661	3300032001	Soil	LADKRTDTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILARGHTLSEPQKTRRKARRLVDDARALEAEADVQVRRAKRNLEKKP
Ga0318577_102343541	3300032091	Soil	LADKRTDTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILYPGHTLSEPQKTRRKARRLVDDAKALEAQADVQVKRAKRNLRKQEPT
Ga0306920_1026561192	3300032261	Soil	LAEKRADTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVRQYEALQRADQPILYPGHTLSEPQKTRRKARRLVDDAKALEAQADVQVKRAKRNLRKQEPT
Ga0306920_1027343492	3300032261	Soil	KRTDTTATRKELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILARGHTLSEPQKTRRKARRLVDDARALEAEADVQVRRAKRNLEKKPS
Ga0318519_106311241	3300033290	Soil	KELNRQMRMAVKRFDLDEGDGEAWAFLCECGDDHCQEWVTLPVTSYEALQRADQPILARGHTLSEPQKTRRKARRLVDDAKALEAEADVQVKRAKRNLEKKPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086915

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences