Metagenome / Metatranscriptome Family F086870

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086870
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	126 residues
Representative Sequence	SYLRAGHKEKPDVIVALHVYLSRNEEEAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPNFR
Number of Associated Samples	96
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	85.45 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (12.727 % of family members)
Environment Ontology (ENVO)	Unclassified (22.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.41% β-sheet: 10.96% Coil/Unstructured: 48.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
c.1.16.0: automated matches	d7bipa_	7bip	0.82488
c.1.16.1: Bacterial luciferase (alkanal monooxygenase)	d1luca_	1luc	0.78545
c.1.16.0: automated matches	d3b9oa_	3b9o	0.69438
c.1.16.0: automated matches	d6lr1a_	6lr1	0.69282
c.1.16.2: Non-fluorescent flavoprotein (luxF, FP390)	d1nfpa_	1nfp	0.68237

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF09084	NMT1	23.64
PF02627	CMD	13.64
PF00682	HMGL-like	2.73
PF09917	DUF2147	2.73
PF02436	PYC_OADA	1.82
PF00296	Bac_luciferase	1.82
PF04909	Amidohydro_2	1.82
PF13379	NMT1_2	1.82
PF02826	2-Hacid_dh_C	1.82
PF05226	CHASE2	1.82
PF01381	HTH_3	0.91
PF13676	TIR_2	0.91
PF00005	ABC_tran	0.91
PF00528	BPD_transp_1	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	23.64
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	23.64
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	13.64
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	13.64
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.82
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	1.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.36 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	55.45 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5.45 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	55.45 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	4.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	55.45 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	4.55 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	55.45 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	4.55 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	55.45 %
Brevibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus	4.55 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	55.45 %
Brevibacillus panacihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus panacihumi	3.64 %
Brevibacillus massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus massiliensis	0.91 %
Amycolatopsis methanolica group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis methanolica group	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	55.45 %
Brevibacillus panacihumi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus panacihumi	3.64 %
Amycolatopsis methanolica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis methanolica group → Amycolatopsis methanolica	0.91 %
Brevibacillus massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus massiliensis	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_100822892	All Organisms → cellular organisms → Bacteria → Proteobacteria	1709	Open in IMG/M
3300004016\|Ga0058689_10121621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300004268\|Ga0066398_10000104	All Organisms → cellular organisms → Bacteria	4050	Open in IMG/M
3300005186\|Ga0066676_11175838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus panacihumi	503	Open in IMG/M
3300005293\|Ga0065715_10056033	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300005293\|Ga0065715_10578858	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005294\|Ga0065705_10450267	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300005295\|Ga0065707_10249887	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300005330\|Ga0070690_100629940	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005331\|Ga0070670_100720556	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300005332\|Ga0066388_106563133	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005364\|Ga0070673_100087298	All Organisms → cellular organisms → Bacteria	2542	Open in IMG/M
3300005444\|Ga0070694_100235708	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1378	Open in IMG/M
3300005446\|Ga0066686_10874305	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005446\|Ga0066686_11012964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus panacihumi	539	Open in IMG/M
3300005447\|Ga0066689_10855956	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300005454\|Ga0066687_10277088	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300005467\|Ga0070706_100044162	All Organisms → cellular organisms → Bacteria	4117	Open in IMG/M
3300005468\|Ga0070707_101791909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300005518\|Ga0070699_100154738	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300005518\|Ga0070699_100338611	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300005518\|Ga0070699_102104220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300005540\|Ga0066697_10100845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1682	Open in IMG/M
3300005556\|Ga0066707_10072230	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2061	Open in IMG/M
3300005576\|Ga0066708_10144512	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300005614\|Ga0068856_102367718	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300005764\|Ga0066903_108179413	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005873\|Ga0075287_1062136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus massiliensis	525	Open in IMG/M
3300005889\|Ga0075290_1000629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4121	Open in IMG/M
3300006031\|Ga0066651_10591558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus panacihumi	590	Open in IMG/M
3300006797\|Ga0066659_10322849	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1187	Open in IMG/M
3300006903\|Ga0075426_10254291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1280	Open in IMG/M
3300006904\|Ga0075424_100834818	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300007076\|Ga0075435_101190536	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	667	Open in IMG/M
3300007076\|Ga0075435_101863953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300009012\|Ga0066710_100615046	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1649	Open in IMG/M
3300009012\|Ga0066710_104056724	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300009078\|Ga0105106_10806169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300009100\|Ga0075418_10327996	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300009137\|Ga0066709_100156018	All Organisms → cellular organisms → Bacteria	2929	Open in IMG/M
3300009137\|Ga0066709_104678973	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300009147\|Ga0114129_10160951	All Organisms → cellular organisms → Bacteria → Proteobacteria	3066	Open in IMG/M
3300009147\|Ga0114129_12870480	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300009162\|Ga0075423_11266093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	788	Open in IMG/M
3300010043\|Ga0126380_10165082	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300010359\|Ga0126376_10328052	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300010360\|Ga0126372_10411884	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300010360\|Ga0126372_10448035	All Organisms → cellular organisms → Bacteria → Proteobacteria	1195	Open in IMG/M
3300010362\|Ga0126377_10920010	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300010366\|Ga0126379_10024733	All Organisms → cellular organisms → Bacteria → Proteobacteria	4581	Open in IMG/M
3300010373\|Ga0134128_10155515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2584	Open in IMG/M
3300010397\|Ga0134124_10640650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1045	Open in IMG/M
3300010398\|Ga0126383_10733997	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300010398\|Ga0126383_11798210	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300011435\|Ga0137426_1008708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2315	Open in IMG/M
3300012173\|Ga0137327_1010588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1783	Open in IMG/M
3300012349\|Ga0137387_10875039	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	650	Open in IMG/M
3300012506\|Ga0157324_1004138	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	990	Open in IMG/M
3300012509\|Ga0157334_1037808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	618	Open in IMG/M
3300012519\|Ga0157352_1012215	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	927	Open in IMG/M
3300012911\|Ga0157301_10088508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	886	Open in IMG/M
3300012914\|Ga0157297_10482857	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300012948\|Ga0126375_10393607	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300012971\|Ga0126369_10386105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1434	Open in IMG/M
3300012971\|Ga0126369_12403660	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300012972\|Ga0134077_10217007	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300012976\|Ga0134076_10597802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300012985\|Ga0164308_12293318	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300013297\|Ga0157378_12259401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300013297\|Ga0157378_12809024	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300014150\|Ga0134081_10265437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	605	Open in IMG/M
3300014154\|Ga0134075_10501774	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300014301\|Ga0075323_1019297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1189	Open in IMG/M
3300014324\|Ga0075352_1225827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis methanolica group → Amycolatopsis methanolica	565	Open in IMG/M
3300014745\|Ga0157377_10346312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	995	Open in IMG/M
3300015374\|Ga0132255_101615888	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	982	Open in IMG/M
3300016422\|Ga0182039_11316688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300016445\|Ga0182038_10569997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	974	Open in IMG/M
3300017792\|Ga0163161_10231420	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1434	Open in IMG/M
3300017936\|Ga0187821_10218437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	737	Open in IMG/M
3300018063\|Ga0184637_10784424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300018074\|Ga0184640_10193584	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	917	Open in IMG/M
3300018074\|Ga0184640_10408558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300018082\|Ga0184639_10229121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	984	Open in IMG/M
3300019228\|Ga0180119_1095007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	583	Open in IMG/M
3300020198\|Ga0194120_10541481	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300020200\|Ga0194121_10537328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300025160\|Ga0209109_10416334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300025903\|Ga0207680_10212492	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1323	Open in IMG/M
3300025913\|Ga0207695_11114938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300025932\|Ga0207690_10418770	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1071	Open in IMG/M
3300026003\|Ga0208284_1006150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	931	Open in IMG/M
3300026327\|Ga0209266_1172791	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	835	Open in IMG/M
3300026329\|Ga0209375_1153017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Brevibacillus → Brevibacillus panacihumi	968	Open in IMG/M
3300026540\|Ga0209376_1210371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	874	Open in IMG/M
3300027424\|Ga0209984_1016667	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300027526\|Ga0209968_1037883	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	819	Open in IMG/M
3300027527\|Ga0209684_1001606	All Organisms → cellular organisms → Bacteria → Proteobacteria	3999	Open in IMG/M
3300027654\|Ga0209799_1025364	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300027722\|Ga0209819_10163208	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	779	Open in IMG/M
3300027725\|Ga0209178_1387356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300031229\|Ga0299913_10100845	All Organisms → cellular organisms → Bacteria → Proteobacteria	2819	Open in IMG/M
3300031890\|Ga0306925_11925757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300031910\|Ga0306923_12262147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300033004\|Ga0335084_10747235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	995	Open in IMG/M
3300033289\|Ga0310914_10062277	All Organisms → cellular organisms → Bacteria	3113	Open in IMG/M
3300033412\|Ga0310810_10092818	All Organisms → cellular organisms → Bacteria	3612	Open in IMG/M
3300033412\|Ga0310810_10105709	All Organisms → cellular organisms → Bacteria	3350	Open in IMG/M
3300033475\|Ga0310811_11203959	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	622	Open in IMG/M
3300034178\|Ga0364934_0300478	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.27%
Host-Associated	Host-Associated	22.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.36%
Plants	Host-Associated → Plants	22.73%
Aquatic	Environmental → Aquatic	10.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.27%
Freshwater	Environmental → Aquatic → Freshwater	5.45%
Sediment	Environmental → Aquatic → Sediment	5.45%
Floodplain	Environmental → Terrestrial → Floodplain	0.91%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.09%
Loam	Environmental → Terrestrial → Soil → Loam	10.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Lake	Environmental → Aquatic → Freshwater → Lake	1.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.91%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.91%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.64%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.82%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental	Open in IMG/M
3300020200	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015020 Mahale Deep Cast 50m	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026003	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1008228923	3300000955	Soil	MGIPFARSSSILEVKGKNDIFKESYFRAGHKERPDIIVALHVYLHENEESAITSARPCYQRVLEYLGTSRRPGAKVPDFDNVKKEKLVVFSSPERAAEIFREYENIGVTHVICMVNFGGVPMPDVRRTLELMSKEIFPKFH*
Ga0058689_101216212	3300004016	Agave	YLRAGHKEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTVKKQKLGVFGTPENTCSIFKEYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPNFR*
Ga0066398_100001041	3300004268	Tropical Forest Soil	IIVALHVYLHENEESATTSAHICYQRVLEYLGRSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVICMVNFGGVPMPDVRRTLELMSKEIFPKFH*
Ga0066676_111758381	3300005186	Soil	VALHVYLHPNEEEAVKVSRPCFERIVEYLKKYRRPGAKVPDFDNVKTERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMSDVRRTLELMSKEVMPKFQ*
Ga0065715_100560331	3300005293	Miscanthus Rhizosphere	IVALHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPNFR*
Ga0065715_105788582	3300005293	Miscanthus Rhizosphere	LHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPQFR*
Ga0065705_104502672	3300005294	Switchgrass Rhizosphere	TSLHEVKEKNDLFESSYLRAGHEEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0065707_102498873	3300005295	Switchgrass Rhizosphere	LFENSYLRAGHKEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVDYLTKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEQIGVTHIICMLNFGGVPMPDVRRTMELMSQEVFPNFR*
Ga0070690_1006299401	3300005330	Switchgrass Rhizosphere	VALHVYLADTEEEARASAQVYYARVLEYLRTSRRPGSRVPEFDTVVREKLVIFATPERATEILKEYEKIGVAHVISMVNFGGVPMPEVRRTLELMSKKIFPQFNE*
Ga0070670_1007205561	3300005331	Switchgrass Rhizosphere	IKTGEMGFSIMGIPFARSTSLHEVKEKNDLFESSYLRAGHEEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0066388_1065631332	3300005332	Tropical Forest Soil	AGHKEAPDIIVALHVYLHENEESATTSAHICYQRVLEYLGKSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVISMVNFGGVPMPDVRRTLELMSKEIFPEFH*
Ga0070673_1000872984	3300005364	Switchgrass Rhizosphere	IVALHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPQFR*
Ga0070694_1002357081	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MGFSIMGIPFARSTSLLEVKEKNDLFENSYLRAGHKEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0066686_108743051	3300005446	Soil	EPDIIVALHAYLHQNEEDAVRFGRPYFERALEFHKTHRRPGSKVVDFDNVKAERLVVFSSPERAEAIFREYEKIGVTHVICMVNFGGTPMGDVRRTMELISNELMPRFP*
Ga0066686_110129641	3300005446	Soil	DLFKESYIRAGHKEDPDIIVALHVYLHRNEEEAVKFSRPCFERIVEYLRKYRRPGAKVPDFDNVKNERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMAEVRRTLELMSKEVMPKFQ*
Ga0066689_108559561	3300005447	Soil	HKEEPDIIVALHVYLTRGEEDAIDSARPHFERVVDYLKKSRRPGAKVPDFDDIRKEKLAVVTTPENAVAILREYEKIGVTHVISMVNFGGVPMNDVRRTLELMSKEVFPRFK*
Ga0066687_102770882	3300005454	Soil	DETLIKTGELGFSIMGIPFVRSNTILDVKEKNDLFKESYFRAGHKEQPDIIVALHVYLHRNEEEAVKVSRPCFERIVEYLRKYRRPGAKVPDFDNVKNERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMSDVRRTLELMSKEVMPKFQ*
Ga0070706_1000441625	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ESYFRAGHKEAPDIIVALHVYLQEDEESAITSARVCYQRVLEYLGTSRRPGAKVPDFDNVKKEKLVVFSSPEGAAEIFREYENIGVTHVICMVNFGGVPMPDVRRTLELMSKEVMPRWR*
Ga0070707_1017919091	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RAGHKEKPDIIVALHVYLHENEESAITSARLYYARVVEYLRTSRRPGSKVPDFDAVNREKLVVFSTPERAEEIFREYEKIGVTHVICMVNFGGVPMPEVRRTLELMSKEVIPRFL*
Ga0070699_1001547383	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PDIIVALHVYRHENEESAITSARFCYQRVLEYLGTSRRPGAKVPDFDNVKKEKLVVFSSPEGAAEIFREYENIGVTHVICMVNFGGVPMPDVRRTLELMSKEVMPRWR*
Ga0070699_1003386111	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	ESYFRAGHKEKPDIIVALHVYLHENEESAITSARLYYARVVEYLRTSRRPGSKVPDFDAVNREKLVVFSTPERAEEIFREYEKIGVTHVICMVNFGGVPMPEVRRTLELMAKKLFPKFL*
Ga0070699_1021042201	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DSAITSARVYYERILDYLRISRRPGAKVPDFDTVNRERLVIFSTPERAEEIFREYENIGVTHVICMVNFGGVPMPDVRRTLELMSKEVMPTFRQRK*
Ga0066697_101008452	3300005540	Soil	VYLQRSEEDAVKSARPHYARVADYLKTSRRPGAPVPDFDNVKNERLVVFSSPERAEEILREYEKIGVTHIICMVNFGGVPMAEVRRTLELMSKEVMPKFQ*
Ga0066707_100722301	3300005556	Soil	LEVKEKNDLFKESYIRAGHKEDPDIIVALHVYLHPNEEEAVKVSRPCFERIVEYLKKYRRPGAKVPDFDNVKTERLVVFSSPERAEEIFCEYEKIGVTHIICMVNFGGVPMTDVRRTLELMSKEVMPKFQ*
Ga0066708_101445123	3300005576	Soil	DVKEKNDLFKESYIRAGHKEDPDIIVALHVYLHRNEEEAVNFSRPCFERIVEYLRKYRRPGAKVPDFDNVKNERLVVFSSPERAEEIFREYEKIGVTHVICMVNFGGVPMPEVRRTLELMSKEVMPKFQ*
Ga0068856_1023677182	3300005614	Corn Rhizosphere	FESSYLRAGHEEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0066903_1081794131	3300005764	Tropical Forest Soil	VYLHENEESATTSAHICYQRVLEYLGKSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVISMVNFGGVPMPDVRRTLELMSKEIFPEFH*
Ga0075287_10621361	3300005873	Rice Paddy Soil	SDETLIRAGELGFPIMGIPFVRSTSLAEVKQKNELFMDSYVRAGHKERPDVMIALHVYLQHSEQDAVNSARPCFERVVDYLTKYRRPGARVPDFNTIKKDQLAIFTTPEDACAIFREYEKIGVTHVIGMVNFGGVPMPDVRRTLQLMAREVFPQFR*
Ga0075290_10006291	3300005889	Rice Paddy Soil	RAGHKERPDVMIALHVYLHRKEEEAVQAVRPCFERVVDYLTKYRRPGARVPDFNTIKKDQLAIFTTPEDACAIFREYEKIGVTHVIGMVNFGGVPMPDVRRTLELMAREVFPQFR*
Ga0066651_105915581	3300006031	Soil	KNDLFRESYIRAGHKENPDIIVALHVYLQRSEEDAVKSARPHYARVADYLKTSRRSGAPVPDFDNVKNERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMPEVRRTLELMSNEVMPKFQ*
Ga0066659_103228493	3300006797	Soil	SGNMLEVKEKNDLFRESYIRAGHKENPDIIVALHVYLQRSEEDAVKSARPHYARVADYLKTSRRPGAPVPDFDNIKKEKLALFTTPENAVAILKKYEKIGMTHIICMVNFGGVPMSDVRRTLELMSKEVMPKFQ*
Ga0075426_102542911	3300006903	Populus Rhizosphere	ASSDETLIKTGEMGFSIMGIPFARSTSLHEVKEKNDLFESSYLRAGHEEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0075424_1008348182	3300006904	Populus Rhizosphere	GHKERPDIIVALHVYLHENEESAITSARPCYQRVLEYLGTSRRPGAKVPDFDDVKKEKLVVFSSPERAAEIFREYENIGVTHVICMVNFGGVLMPDVRRTLELMSKEIFPKFD*
Ga0075435_1011905361	3300007076	Populus Rhizosphere	SSDETLIKTGEMGFSIMGIPFARSTSLHEVKEKNDLFESSYLRAGHEEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0075435_1018639531	3300007076	Populus Rhizosphere	SSSILEVKEKNDIFNESYFRAGHKEKPDIIVALHVYLHENEESAITSARLYYARVVEYLRTSRRPGSKVPDFDAVNREKLVVFSTPERAEEIFREYEKIGVTHVICMVNFGGVPMPEVRRTLELMSKKLFPKFL*
Ga0066710_1006150463	3300009012	Grasslands Soil	GELGFSTMGIPFVRSNSILEVKEKNDLFKESYFRAGHKEDPDIIVALHVYLHRNEEEAVKFSRPCFERIVEYLRKYRRPGAKVPDFDNVKNERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMTDVRRTLELMSKEVMSKFQ
Ga0066710_1040567241	3300009012	Grasslands Soil	EEEAVKLSRPCFERIVEYLRKYRRPGAKVPDFDNVKNERLVVFSSPERAEEILREYEKIGVTHIICMVNFGGVPMAEVRRTLELMSKEVMPKFQ
Ga0105106_108061692	3300009078	Freshwater Sediment	GFPVMGIPFVRSTSLLEVKQKNDLFMESYARAGHKDKPDVVVALHVYLHPNGQEADKSARPCFDRVVDYLKKYRRPGARVPDLDTIKKDKLALFTTPEDACAIFRDYEKIGVTHIIAMVNFGGVPMPEVRRTMELMSKEVFPNFQ*
Ga0075418_103279961	3300009100	Populus Rhizosphere	HKEKPDVIVALHVYLSRDEADAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPNFC*
Ga0066709_1001560185	3300009137	Grasslands Soil	DIIVALHVYLHSNEEEAVKASRPHFERIVEYLRKYRRPGAKVPDFDNVKNERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMAEVRRTLELMSKEVMSKFQ*
Ga0066709_1046789731	3300009137	Grasslands Soil	NDLFKESYFRAGHKEQPDIIVALHVYLHRNEEEAVKVSRPCFERIVEYLRKYRRPGAKVPDFDNVKNERLVVFSAPERAEEIFREYEKIGVTHIICMVNFGGVPIPEVRRTLELMSKEVMSKFQ*
Ga0114129_101609514	3300009147	Populus Rhizosphere	YFRARHRENPDIIVALHVYLQRNEENAVKSARPHYARVAEYLKTSRRPGAPVPDFDNIKNAKLALFTTPENAVAILKEYEKIGVTHVISMVNFGGVPMDDVRRTLELMSKEVFPNFN*
Ga0114129_128704801	3300009147	Populus Rhizosphere	VALHVYLHENEESAITSARPCYQRVLEYLGTSRRPGAKVPDFDDVKKEKLVVFSSPERAAEIFREYENIGVTHVICMVNFGGVLMPDVRRTLELMSKEIFPKFD*
Ga0075423_112660931	3300009162	Populus Rhizosphere	TSLLEVKEKNELFEKAYFRAGHKEKPDVIVALHVYLSRNEEEAVASSRPCFQRVVDYLIKYRRPGARTLDLDTVKKQKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPNFR*
Ga0126380_101650823	3300010043	Tropical Forest Soil	SILEVKEKNDVFKESYFRAGHKEAPDIIVALHVYLHENEESATTSAHICYQRVLEYLGRSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVISMVNFGGVPMPDVRRTLELMSKEIFPEFH*
Ga0126376_103280521	3300010359	Tropical Forest Soil	EAPDIIVALHVYLHENEESATTSAHICYQRVLEYLGKSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVISMVNFGGVPMPDVRRTLELMSKEIFPEFH*
Ga0126372_104118841	3300010360	Tropical Forest Soil	EESATTSAHICYQRVLEYLGRSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVISMVNFGGVPMPDVRRTLELMSKEIFPEFH*
Ga0126372_104480351	3300010360	Tropical Forest Soil	NEESAITSARVCYQRVLDYLGRSRRPGAKVPEFDDMRKEKLVVFSSPGRATEIFREYENIGVTHIIGMVNFGGVPMPDVRRTLELMSKEIFPKFR*
Ga0126377_109200102	3300010362	Tropical Forest Soil	SKDMLEVKEKNDLFKASYVRAGHKESPDIIVALHVCLERTEEKAVNLSRPHFARVVDYLVKYRRAGAKAPDYDKMKKEKLGIFTTPENAAAILKEYENIGVTHVICMVNFGGMPMTGVRQTLELMSKHVMPILA*
Ga0126379_100247331	3300010366	Tropical Forest Soil	YLRENEESATKSAHICYQRVLEYLGKSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVISMVNFGGVPMPDVRRTLELMSKEIFPEFH*
Ga0134128_101555151	3300010373	Terrestrial Soil	TGEMGFSIMGIPFARSTSLHEVKEKNDLFESSYLRAGHEEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0134124_106406502	3300010397	Terrestrial Soil	KQKNDLFKESYYRAGHKEEPDIMVALHVYLHPSAEAADHSARPCFDRVVDYLKKYRRPGARVPDFDTIKKDQLALFTTPEAACSTFREYAKAGVTHVICMVNFGGVPMPDVRRTLELMSREVLPNFH*
Ga0126383_107339971	3300010398	Tropical Forest Soil	AGHKEAPDIIVALHVYLHENEESATTSAHICYQRVLEYLGTSRRPGAKVPDFDNVKKEKLVVFSSPERAAENFREYENIGVTHVICMVNFGGVPMPDVRRTLELMSKQIFPKFH*
Ga0126383_117982101	3300010398	Tropical Forest Soil	AGHKEAPDIIVALHVYLHENEESATTSAHICYQRVLEYLGRSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVICMVNFGGVPMPDVRRTLELMSKEIFPKFH*
Ga0137426_10087083	3300011435	Soil	KPDIIVALHVYLAGREEEAVESARPPFQRIVDYLVKYRRPGAKTPDFDTIKKGKLAAFTTPEQACAIFREYEKIGVTHVIAMVNFGGVPMPDVRRTMELMSKEVFPKFK*
Ga0137327_10105881	3300012173	Soil	TLTRAGELGFSTMGIPFVRSNSIHEVKEKNDLFMESYLRAGHKEKPDIIVALHVYLAGREEEAVESARPPFQRIVDYLVKYRRPGAKTPDFDTIKKGKLAAFTTPEQACAIFREYEKIGVTHVIAMVNFGGVPMPDVRRTMELMSKEVFPKFK*
Ga0137387_108750391	3300012349	Vadose Zone Soil	IRAGHKEDPDIIVALHVYLHPNEEEAVKVSRPHFERIVEYLKKYRRPGAKVPDFDNVKKERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMSDVRRTLELMSKEVMSKFQ*
Ga0157324_10041381	3300012506	Arabidopsis Rhizosphere	ETLIKTGEMGFSIMGIPFARSTSLHEVKEKNDLFESSYLRAGHKEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIIGMVNFGGVPMPDVRRTMELMSKEVFPNFR*
Ga0157334_10378082	3300012509	Soil	LIKTGEIGFSIMGIPFARSTSLHEVKEKNDLFESSYLRAGHEEKPDVIVALHVYLSRNEEEAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0157352_10122152	3300012519	Unplanted Soil	ASSDETLIKTGEMGFSIMGIPFARSTSLHEVKEKNDLFESSYLRAGHKEKPDVIVALHVYLSRNEEEAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIIGMVNFGGVPMTEVRRTMELMSKEVFPNFR*
Ga0157301_100885082	3300012911	Soil	KEKNDLFENSYLRAGHKEKPDVIVAMHVYLSRNEEDALASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPNFR*
Ga0157297_104828572	3300012914	Soil	LHVYLSRNEEDALASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPNFR*
Ga0126375_103936071	3300012948	Tropical Forest Soil	LHENEESATTSAHICYQRVLEYLGKSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVICMVNFGGVPMPDVRRTLELMSKEIFPKFH*
Ga0126369_103861052	3300012971	Tropical Forest Soil	IIVALHVYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTVKKEKLGVFGTPENTCSILREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPNFR*
Ga0126369_124036602	3300012971	Tropical Forest Soil	VALHVYLHENEESATTSAHICYQRVLEYLGKSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVISMVNFGGVPMPDVRRTLELMSKEIFPEFH*
Ga0134077_102170072	3300012972	Grasslands Soil	RENPDIIVALHVYLQRNEENAVKAARPHYARVAEYLKTSRRPGATVPDFDSIKKEKLALFTTPENAVAILKEYEKIGVTHVISMVNFGGVPMNDVRRTLELMSKEVFPRFK*
Ga0134076_105978021	3300012976	Grasslands Soil	KESYIRAGHKEDPDIIVALHVYLHPNEEEAVKVSRPCFERIVEYLKKYRRPGAKVPDFDNVKTERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMPEVRRTLELMSKEVMPKFQ
Ga0164308_122933182	3300012985	Soil	GHKEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0157378_122594011	3300013297	Miscanthus Rhizosphere	PDVIVALHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0157378_128090241	3300013297	Miscanthus Rhizosphere	PDVIVALHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPQFR*
Ga0134081_102654371	3300014150	Grasslands Soil	SDETLIKAGELGFSTMGIPFVRSSAILDVKEKNDLFKESYFRAGHKEQPDIIVALHVYLHPNEKKAVNFSRPCFDCIVEYLRKYRRPGAKVPDFDNVKNERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMSDVRRTLELMSKEVMPKFQ*
Ga0134075_105017742	3300014154	Grasslands Soil	PDIIVALHAYLHQNEEDAVRFGRPYFERALEFHKTHRRPGSKVVDFDNVKAERLVIFSSPERAEAIFREYEKIGVTHVICMVNFGGTPMGDVRRTMELISNELMPRFP*
Ga0075323_10192971	3300014301	Natural And Restored Wetlands	SSDETLIRAGELGFPIMGIPFVRSTSLAEVKQKNELFMDSYVRAGHKERPDVMIALHVYLQHSEQDAVNSARPCFERVVDYLTKYRRPGARVPDFNTIKKDQLAIFTTPEDACAIFREYEKIGVTHIIGMVNFGGVPMPEVRRTLQLMAREVFPQFR*
Ga0075352_12258271	3300014324	Natural And Restored Wetlands	SDDTLVRSGEMGFPTMGIPFARSNSILEVKQKNDLFMESYSRAGHKDAPDIMVALHVYLHPNEDEAVRLSFPCYQRVLEYLGTSRRPGAKVPDFDGVRKERLVVLSSPERAAEIFREYQKIGVSHIICMVNFGGAPMPEVRRTMELMSKEVFPNFR*
Ga0157377_103463121	3300014745	Miscanthus Rhizosphere	TLIKTGQMGFSIMGIPFARSTSLLEVKEKNDLFENSYLRAGHKEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0132255_1016158881	3300015374	Arabidopsis Rhizosphere	EKNDLFESSYLRAGHKEKPDVIVALHVYLSRNEEEAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR*
Ga0182039_113166882	3300016422	Soil	KTGEMGFSIMGIPFARSTSLLEVKKKNDLFENSYFRAGHKEKPDVIVALHAYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTVKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDARRTMELMSKEVFPNFRGFINLGQR
Ga0182038_105699972	3300016445	Soil	DVIVALHAYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTVKKEKLGVFGTPENMCSIFSEYEKIGVTHVICMVNFGGVPMPDVRRTMELMSKEVFPNFRGFINLGQR
Ga0163161_102314202	3300017792	Switchgrass Rhizosphere	IPFARSTSLLEVKEKNDLFENSYLRAGHKEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR
Ga0187821_102184372	3300017936	Freshwater Sediment	ALHVYLSRNEEEAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKMGVTHIIGMVNFGGVPMPDVRRTMELMSKEVFPNFR
Ga0184637_107844242	3300018063	Groundwater Sediment	EEPDIIVALHVYLHPNEEVAVKASRPPFDRVVEYLRKYRRPGSKVPDFDSVKEKKLVVFSSPEHAEEIFREYEKIGVTHIVCMVNFGGVPMPEVRRTLELMSQEIFPKFR
Ga0184640_101935841	3300018074	Groundwater Sediment	EVKQKNDLFKESYMRAGHKEDPDIIVALHVYLQPNAEDAVRFSRPHFERVLEYLRTSRRPGSKVPDFDNVRKEKLVVFSSPERAEEIFREYEKAGVTHIIGMVNFGGVPMADVRQTLELMSTEVFPRFQ
Ga0184640_104085581	3300018074	Groundwater Sediment	TLIRAGELGFPIMGIPSTRSNTLIDVKEKNDLFKESYLRAGHKEEPDIIVALHVYLHQNEEDAASFGRPYFERALQFHKTHRRPGSKAVDFANVKKERLVIFSTPAGAEEILREYEKAGVTHVICMVNFGGAPMGDVRRTMELVSKELMPRFS
Ga0184639_102291211	3300018082	Groundwater Sediment	NTLIDVKEKNDLFKESYLRAGHKEEPDIIVALHVYLHQNEEDAASFGRPYFERALQFHKTHRRPGSKAVDFANVKKERLVIFSTPAGAEEILREYEKAGVTHVICMVNFGGAPMGDVRRTMELVSKELMPRFS
Ga0180119_10950071	3300019228	Groundwater Sediment	AASSDETLTRAGELGFSTMGIPFVRSNSIHEVKEKNDLFMESYLRAGHKEKPDIIVALHVYLAGREEEAVESARPPFQRIVDYLVKYRRPGAKTPDFDTIKKGKLAAFTTPEQACAIFREYEKIGVTHVIAMVNFGGVPMPDVRRTMELMSKEVFPKFK
Ga0194120_105414811	3300020198	Freshwater Lake	GEMGFATMGIPFARSSSIREVKEKNDLFMNSYLRAGHKEKPDIIVALHVYLDRREADAVKSARAPFDRVVEYLVKYRRPGSKAPDFDTIKKEQLAAFTDPDGACTIFREYEKIGVTHIIAMVNFGGVPMPEVRRTMELMSKEVFSNFK
Ga0194121_105373281	3300020200	Freshwater Lake	ATMGIPFARSSSIREVKEKNDLFMNSYLRAGHKEKPDIIVALHVYLDRREADAVKSARAPFDRVVEYLVKYRRPGSKAPDFDTIKKEQLAAFTDPDGACTIFREYEKIGVTHIIAMVNFGGVPMPEVRRTMELMSKEVFSNFK
Ga0209109_104163341	3300025160	Soil	ELGFPIMGIPFARSASLLDVKQKNDLFKDSYFRAGHTQAPDIMVALHVLLHQSEEAACAIARPCFDRVVDYLKKYRRPGSRVPDFDTLKRDQLALFTTPEHACAIFREYEKIGVTHVICMVNFGGVAMLDVRRTLELLAKEVFPHFK
Ga0207680_102124922	3300025903	Switchgrass Rhizosphere	DVIVALHVYLSRNEEDAVASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPQFR
Ga0207695_111149382	3300025913	Corn Rhizosphere	KPDVIVALHVYLSRNEEDALASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVSMPDVRRTMELMSKEVFPNFR
Ga0207690_104187701	3300025932	Corn Rhizosphere	SLLEVKEKNDLFENSYLRAGHKEKPDVIVALHVYLSRNEEDALASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPQFR
Ga0208284_10061501	3300026003	Rice Paddy Soil	VRAGHKERPDVMIALHVYLHRKEEEAVQAVRPCFERVVDYLTKYRRPGARVPDFNTIKKDQLAIFTTPEDACAIFREYEKIGVTHVIGMVNFGGVPMPDVRRTLELMAREVFPQFR
Ga0209266_11727911	3300026327	Soil	PFVRSNSIHEVKEKNDLFKESYIRAGHKEDPDIIVALHVYLHPNEEEAVNFSRPCFDCIVEYLRKYRRPGAKVPDFDNVKNERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMPEVRRTLELMSNEVMPKFQ
Ga0209375_11530171	3300026329	Soil	KEKNDLFRESYIRAGHKENPDIIVALHVYLQRSEEDAVKSARPHYARVADYLKTSRRPGAPVPDFDNIKKEKLALFTTPENAVAILKKYEKIGVTHIICMVNFGGVPMTDVRRTLELMSKEVMSKFQ
Ga0209376_12103712	3300026540	Soil	MGIPFVRSNSILEVKEKNDLFKESYIRAGHKEDPDIIVALHVYLHRNEEEAVNFSRPCFERIVEYLRKYRRPGAKVPDFDNVKNERLVVFSSPERAEEIFREYEKIGVTHIICMVNFGGVPMSDVRRTLELMSKEVMPKFQ
Ga0209984_10166671	3300027424	Arabidopsis Thaliana Rhizosphere	VVALHVYLHRKEEEAVQAVRPCFERVVDYLKRYRRPGSRVPDLDSIKENKLALFTTPDNACAIFQEYEKIGVTHVICMVNFGGVPMPDVRRTLELMSTQVIPNLR
Ga0209968_10378832	3300027526	Arabidopsis Thaliana Rhizosphere	RDSPDIMVALHVYLHHNEEDAVKAVRPCFDRVVDYLKKYRRPGARVPDLDTIKENKLALFTTPDDACAVFREYQRIGVTHVICMVNFGGVPMPEVRQTLELMAQEVFPHFR
Ga0209684_10016065	3300027527	Tropical Forest Soil	GIPFARSSSILEVKEKNDVFKESYFRAGHKEAPDIIVALHVYLHENEESATTSAHTCYQRVLEYLGKSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVISMVNFGGVPMPDVRRTLELMSKEIFPEFH
Ga0209799_10253643	3300027654	Tropical Forest Soil	IIVALHVYLHENEESATTSAHICYQRVLEYLGRSRRPGAKVPDFDTVKKEKLVVFSSPERAAEIFREYENIGVTHVICMVNFGGVPMPDVRRTLELMSKEIFPKFH
Ga0209819_101632082	3300027722	Freshwater Sediment	DETLIRAGELGFPIMGIPFVRSTSLLEVKQKNELFMDSFVRGGHKKKPDIMVALHVYLHPSEQEAVRLARPCFERVVDYLKKYRRPGARVPDFDTIKKDQLALFTNPEDACAIFREYEKIGVTHVIAMVNFGGVPMPEVRQTLELMSKEIFPSFV
Ga0209178_13873562	3300027725	Agricultural Soil	SYLRAGHKEKPDVIVALHVYLSRNEEEAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPNFR
Ga0299913_101008454	3300031229	Soil	GIPFVRSTSLLEVKQKNDLFMDSYVRAGHKQEPDTMVALHVYLHPREEEAVKAARSCFERVVDYLKKYRRPGARVPDFDTIKNNRLALFTTPDDACAILREYEKTGVTHVICMVNFGGVPLPEVRRTLELMSRDVFPNLR
Ga0306925_119257571	3300031890	Soil	SDETLVKTGEMGFSIMGIPFARSTSLLEVKKKNDLFENAYFRAGHKEKPDVIVALHAYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTVKKEKLGVFGTPENMCSIFSEYEKIGVTHVICMVNFGGVPMPDVRRTMELMSKEVFPNFRGFINLGQR
Ga0306923_122621471	3300031910	Soil	KPDVIVALHAYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTVKKEKLGVFGTPENMCSIFSEYEKIGVTHVICMVNFGGVPMPDVRRTMELMSKEVFPNFRGFINLGQR
Ga0335084_107472353	3300033004	Soil	GAGHKEAPDIIVALHVYLHESDAGAAASARPCYQRVLDYLGKSRRPGAKVPDFETVNKEKLVVFSSPERATEIFREYGNIGVTHIIAMVNFGGVPMSEVRRTMELMSNKVFPQFH
Ga0310914_100622774	3300033289	Soil	EKNELFENAYLRAGHKEKPDVIVALHVYLSRNEEDAVASSRPCFQRVVDYLIKYRRPGARTLDLDTVKKEKLGVFGTPENMCSIFSEYEKIGVTHVICMVNFGGVPMPDVRRTMELMSKEVFPNFRGFINLGQR
Ga0310810_100928185	3300033412	Soil	GFSIMGSPFARSTSLHEVKEKNDLFESSYLRAGHKEKPDVIVALHVYLSRNEEEAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIIGMVNFGGVPMPDVRRTMELMSKEVFPNFR
Ga0310810_101057094	3300033412	Soil	WIAASSDETLIKTGEMGFSIMGIPFARSTSLLEVKEKNDLFENSYLRAGHKEKPDVIVALHVYLSRNEEDALASSRPCFQRVVEYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIICMVNFGGVPMPDVRRTMELMSKEVFPQFR
Ga0310811_112039592	3300033475	Soil	ETLIKTGEMGFSIMGIPFARSTSLHEVKEKNDLFESSYLRAGHKEKPDVIVALHVYLSRNEEEAVASSRPCFQRVVDYLIKYRRPGARTLDLDTIKKEKLGVFGTPENTCSIFREYEKIGVTHIIGMVNFGGVPMPDVRRTMELMSKEVFPNFR
Ga0364934_0300478_6_368	3300034178	Sediment	MEAYSRAGHKDEPDIMVALHVYLHPNEDDAVRLSHPCYERILEYLRTSRRPGAKVPDFDNVRKEKLVVFSSPERAVEIFREYQAIGVTHIICMVNFGGAPMPEVRRTLELMSKEVFPNFK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086870

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences