Metagenome Family F086790

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086790
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	68 residues
Representative Sequence	MAKQYKVGFKTINAKLKVTRAHLQRIKKNVIKSDQKKIDAQIEAIDVIIAACRIRMSATYTGSGS
Number of Associated Samples	80
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.18 %
% of genes near scaffold ends (potentially truncated)	18.18 %
% of genes from short scaffolds (< 2000 bps)	65.45 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.545 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.818 % of family members)
Environment Ontology (ENVO)	Unclassified (44.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.01% β-sheet: 8.60% Coil/Unstructured: 48.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00881	Nitroreductase	19.09
PF13432	TPR_16	19.09
PF11138	DUF2911	7.27
PF07719	TPR_2	3.64
PF13414	TPR_11	2.73
PF13429	TPR_15	1.82
PF14559	TPR_19	1.82
PF13181	TPR_8	1.82
PF00892	EamA	1.82
PF08241	Methyltransf_11	0.91
PF02737	3HCDH_N	0.91
PF14518	Haem_oxygenas_2	0.91
PF13431	TPR_17	0.91
PF00069	Pkinase	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.64
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.91
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.91
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.91
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.91
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.55 %
Unclassified	root	N/A	35.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.55 %
Unclassified	root	N/A	35.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.55 %
Unclassified	root	N/A	35.45 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.00 %
Unclassified	root	N/A	35.45 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	41.82 %
Unclassified	root	N/A	35.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.82 %
Unclassified	root	N/A	35.45 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.82 %
Unclassified	root	N/A	35.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.82 %
Unclassified	root	N/A	35.45 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.82 %
Unclassified	root	N/A	35.45 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10916954	Not Available	500	Open in IMG/M
3300002245\|JGIcombinedJ26739_100315633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1446	Open in IMG/M
3300002917\|JGI25616J43925_10014736	All Organisms → cellular organisms → Bacteria	3458	Open in IMG/M
3300005332\|Ga0066388_100054373	All Organisms → cellular organisms → Bacteria	4160	Open in IMG/M
3300005537\|Ga0070730_10750646	Not Available	616	Open in IMG/M
3300005602\|Ga0070762_10118925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1550	Open in IMG/M
3300005610\|Ga0070763_10520568	Not Available	682	Open in IMG/M
3300005764\|Ga0066903_100069463	All Organisms → cellular organisms → Bacteria	4492	Open in IMG/M
3300006806\|Ga0079220_10190006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1175	Open in IMG/M
3300007258\|Ga0099793_10034704	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300009038\|Ga0099829_10498345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300009088\|Ga0099830_11846819	Not Available	505	Open in IMG/M
3300009792\|Ga0126374_11723927	Not Available	521	Open in IMG/M
3300010358\|Ga0126370_11140889	Not Available	721	Open in IMG/M
3300010359\|Ga0126376_10045218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3083	Open in IMG/M
3300010360\|Ga0126372_10021831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3799	Open in IMG/M
3300010366\|Ga0126379_10287785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1641	Open in IMG/M
3300011271\|Ga0137393_10123291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2140	Open in IMG/M
3300012202\|Ga0137363_10272583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1381	Open in IMG/M
3300012202\|Ga0137363_10434133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1097	Open in IMG/M
3300012203\|Ga0137399_10694379	Not Available	856	Open in IMG/M
3300012203\|Ga0137399_11070182	Not Available	679	Open in IMG/M
3300012205\|Ga0137362_10275604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1455	Open in IMG/M
3300012359\|Ga0137385_10048986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3780	Open in IMG/M
3300012361\|Ga0137360_10241166	All Organisms → cellular organisms → Bacteria → Acidobacteria	1480	Open in IMG/M
3300012361\|Ga0137360_11096431	Not Available	688	Open in IMG/M
3300012582\|Ga0137358_10203387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1351	Open in IMG/M
3300012683\|Ga0137398_10075717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2062	Open in IMG/M
3300012685\|Ga0137397_10089162	All Organisms → cellular organisms → Bacteria	2250	Open in IMG/M
3300012922\|Ga0137394_10095251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2503	Open in IMG/M
3300012923\|Ga0137359_10321417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1377	Open in IMG/M
3300012927\|Ga0137416_10200374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1601	Open in IMG/M
3300012929\|Ga0137404_10139451	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300012929\|Ga0137404_12053051	Not Available	534	Open in IMG/M
3300012930\|Ga0137407_10726855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300012944\|Ga0137410_10093330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2219	Open in IMG/M
3300015054\|Ga0137420_1296151	All Organisms → cellular organisms → Bacteria → Acidobacteria	6193	Open in IMG/M
3300015242\|Ga0137412_10406170	Not Available	1053	Open in IMG/M
3300015245\|Ga0137409_10011960	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8738	Open in IMG/M
3300020199\|Ga0179592_10134646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300020579\|Ga0210407_10000233	All Organisms → cellular organisms → Bacteria	69675	Open in IMG/M
3300020579\|Ga0210407_10009020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7459	Open in IMG/M
3300020579\|Ga0210407_10105089	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300020579\|Ga0210407_10154147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1772	Open in IMG/M
3300020579\|Ga0210407_10372768	Not Available	1117	Open in IMG/M
3300020579\|Ga0210407_10420829	Not Available	1045	Open in IMG/M
3300020580\|Ga0210403_10018077	All Organisms → cellular organisms → Bacteria → Acidobacteria	5633	Open in IMG/M
3300020580\|Ga0210403_10020276	All Organisms → cellular organisms → Bacteria → Acidobacteria	5306	Open in IMG/M
3300020580\|Ga0210403_10040915	All Organisms → cellular organisms → Bacteria	3705	Open in IMG/M
3300020580\|Ga0210403_10044410	All Organisms → cellular organisms → Bacteria	3551	Open in IMG/M
3300020580\|Ga0210403_10084940	All Organisms → cellular organisms → Bacteria	2555	Open in IMG/M
3300020581\|Ga0210399_10048892	All Organisms → cellular organisms → Bacteria	3397	Open in IMG/M
3300020581\|Ga0210399_10256762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1457	Open in IMG/M
3300020583\|Ga0210401_10059678	All Organisms → cellular organisms → Bacteria	3593	Open in IMG/M
3300020583\|Ga0210401_10411319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1215	Open in IMG/M
3300020583\|Ga0210401_10521826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300021088\|Ga0210404_10174826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1139	Open in IMG/M
3300021170\|Ga0210400_10876612	Not Available	733	Open in IMG/M
3300021171\|Ga0210405_10591196	Not Available	865	Open in IMG/M
3300021181\|Ga0210388_11108081	Not Available	675	Open in IMG/M
3300021406\|Ga0210386_10539882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300021420\|Ga0210394_10160540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1955	Open in IMG/M
3300021432\|Ga0210384_10108179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2493	Open in IMG/M
3300021432\|Ga0210384_10644691	Not Available	950	Open in IMG/M
3300021475\|Ga0210392_10264802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300021475\|Ga0210392_11242880	Not Available	558	Open in IMG/M
3300021477\|Ga0210398_10863756	Not Available	726	Open in IMG/M
3300021479\|Ga0210410_10375321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1275	Open in IMG/M
3300021559\|Ga0210409_10922553	Not Available	747	Open in IMG/M
3300024288\|Ga0179589_10344170	Not Available	676	Open in IMG/M
3300024330\|Ga0137417_1118275	All Organisms → cellular organisms → Bacteria → Acidobacteria	4552	Open in IMG/M
3300024330\|Ga0137417_1439779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1824	Open in IMG/M
3300026304\|Ga0209240_1055934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1481	Open in IMG/M
3300026320\|Ga0209131_1099678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1534	Open in IMG/M
3300026320\|Ga0209131_1201376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300026374\|Ga0257146_1014554	Not Available	1283	Open in IMG/M
3300026475\|Ga0257147_1054325	Not Available	600	Open in IMG/M
3300026490\|Ga0257153_1057408	Not Available	792	Open in IMG/M
3300026557\|Ga0179587_10191768	All Organisms → cellular organisms → Bacteria → Acidobacteria	1291	Open in IMG/M
3300027376\|Ga0209004_1007060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1585	Open in IMG/M
3300027643\|Ga0209076_1083659	Not Available	907	Open in IMG/M
3300027660\|Ga0209736_1112628	Not Available	735	Open in IMG/M
3300027663\|Ga0208990_1054886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300027684\|Ga0209626_1017240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1698	Open in IMG/M
3300027857\|Ga0209166_10007014	All Organisms → cellular organisms → Bacteria → Acidobacteria	7550	Open in IMG/M
3300031057\|Ga0170834_111250567	Not Available	921	Open in IMG/M
3300031057\|Ga0170834_111648950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202	Open in IMG/M
3300031545\|Ga0318541_10565094	Not Available	636	Open in IMG/M
3300031720\|Ga0307469_10034931	Not Available	2976	Open in IMG/M
3300031720\|Ga0307469_10080875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2200	Open in IMG/M
3300031720\|Ga0307469_10409878	Not Available	1160	Open in IMG/M
3300031753\|Ga0307477_10975233	Not Available	557	Open in IMG/M
3300031754\|Ga0307475_10181246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1681	Open in IMG/M
3300031754\|Ga0307475_10259334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1393	Open in IMG/M
3300031823\|Ga0307478_11199197	Not Available	632	Open in IMG/M
3300031912\|Ga0306921_10172510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2534	Open in IMG/M
3300031946\|Ga0310910_10426357	Not Available	1052	Open in IMG/M
3300031962\|Ga0307479_10047847	All Organisms → cellular organisms → Bacteria	4111	Open in IMG/M
3300031962\|Ga0307479_10210287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1916	Open in IMG/M
3300031962\|Ga0307479_10215357	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300032174\|Ga0307470_10048800	Not Available	2154	Open in IMG/M
3300032180\|Ga0307471_100051343	All Organisms → cellular organisms → Bacteria	3404	Open in IMG/M
3300032180\|Ga0307471_100883025	Not Available	1061	Open in IMG/M
3300032180\|Ga0307471_101568726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300032261\|Ga0306920_100109777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4090	Open in IMG/M
3300032261\|Ga0306920_100869030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1320	Open in IMG/M
3300032893\|Ga0335069_11426885	Not Available	748	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.00%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	12.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_109169541	3300001593	Forest Soil	GGMEGVMAKSYKVGFKTISAKLMVTKKHLNKIKKHVTKKDQKAIAAQIQAIDVIIAACKTTKMSATYTGTSD*
JGIcombinedJ26739_1003156332	3300002245	Forest Soil	MPKKFKVGYKTINAKLKVTRHHLNKIKRSVSAGDRKKIEAQIKAIDVILSACKSAKMSATYTGPSN*
JGI25616J43925_100147362	3300002917	Grasslands Soil	MAKQYKVGFKTINAKLKITKGHLQRIKKHVVKSDQKKIDAQIEAIDVIIAACRIRMSATYTGSGS*
Ga0066388_1000543732	3300005332	Tropical Forest Soil	MAKKYTVGFKTINAKLKVTRNHLSKIKKHVIASDQKAIAAQIDAIDTIIAICRTGKMSATYTGSGK*
Ga0070730_107506462	3300005537	Surface Soil	MPRKFKVGYKTINAKLKVTRHHLNKIKKDVSAGDRKKIEAQIKAIDVIIAACKTAKMSVTYTGSSN*
Ga0070762_101189252	3300005602	Soil	MAKKYKVGFKTINAKLQVTREHLKRIKRHVVKGDQKKIDMQIEAINVIIAACKTAKMSATYTGSDD*
Ga0070763_105205682	3300005610	Soil	LPKARTYRVVYLSRRMQFFCMEGSMAKKYKVGFKTINAKLQVTREHLKRIKRHVVKGDQKKIDMQIEAINVIIAACKTAKMSATYTGSDD*
Ga0066903_1000694633	3300005764	Tropical Forest Soil	MAKKYKVGFKTINAKLAVTKRHLKKIKKHVKANDQKVIAAQIQAIDVILAACRVRMSATYTGSGK*
Ga0079220_101900062	3300006806	Agricultural Soil	MAKQYKVGFKTINAKLKVTRKHLKAIKPHVVKSDQKKIDAQIEAIDLIIAACRVKMSATYTGSGN*
Ga0099793_100347042	3300007258	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKITKAHLEKIKGHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGS*
Ga0099829_104983452	3300009038	Vadose Zone Soil	MPKQFKVGYKTINAKLKVTRHHLNKIKKSVSAGDRKKIEAQIKAIDVIIAACKSARMSATYTGNSD*
Ga0099830_118468192	3300009088	Vadose Zone Soil	MPKQFKVGYKTINAKLKVTRHHLNKIKKSVSAGDRKKIEAQIKAIDVIIAACRSARMSATYTGTSD*
Ga0126374_117239271	3300009792	Tropical Forest Soil	MAKKYTVGFKTINAKLKVTRNHLSKIKKHVIASDQKAIAAQIDAIDTIIAVCRTGKMSATYTGSGK*
Ga0126370_111408891	3300010358	Tropical Forest Soil	SSIGGKEGKMAKKYKVGFKTINAKLAVTKRHLKKIKKHVKANDQKVIAAQIQAIDVILAACRVRMSATYTGSGK*
Ga0126376_100452182	3300010359	Tropical Forest Soil	MAKKYTVGFKTINAKLKVTRNHLSKIKKHVIASDQKAIAAQIDAIDTIIAIWSTGKMSATYTGSGK*
Ga0126372_100218312	3300010360	Tropical Forest Soil	MAKKYTVGFKTINAKLKVTRNHLSKIKKHVIARDQKAIAAQIDAIDTIIAICRTGKMSATYTGSGK*
Ga0126379_101310204	3300010366	Tropical Forest Soil	ISQKTNSSIGSKEGKMAKKYKVGFKTINAKLAVTKRHLNKIKKHVKAKDQKVIAAQVQAIDVIMAACRVRMSATYTGSGK*
Ga0126379_102877851	3300010366	Tropical Forest Soil	MAKKYTVGFKTINAKLKVTRNHLSKIRKHVIASDQKAIAAQIDAIDTIIAICRTGKMSATYTGSGK*
Ga0137393_101232913	3300011271	Vadose Zone Soil	MAKQYKVGFKTINAKLAVTKRHLNKIKKLVNKKDQKVIAAQIEAIDLLLSGCTSGKMSRTYTGPTY*
Ga0137363_102725832	3300012202	Vadose Zone Soil	MAKQYKVGFKTINAKLAVTKRHLNKIKKLVNKKDQKVIAAQIEAIDLLLSGCTSGKMSRTYTGLND*
Ga0137363_104341332	3300012202	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLKKIKGHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGR*
Ga0137399_106943792	3300012203	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKRHVIKSDQKKIYDQIQAIKVIIAACRIRMSATYTGSGI*
Ga0137399_110701822	3300012203	Vadose Zone Soil	MVEQQKAKQYKVGFKTINAKLKVTRAHLKKIKGHVIKSDQKKIDDQIHAINVIIAACRIRMSATYTSSGS*
Ga0137362_102756042	3300012205	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKEHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGR*
Ga0137385_100489863	3300012359	Vadose Zone Soil	MAKKFKVGFKTVNAKLAVTKKHLNKIKKHVSKKHQKTITAQVKAIDVILAACGKARMSAFYTAKND*
Ga0137360_102411661	3300012361	Vadose Zone Soil	MQLFCAEGAMVEQQKAKQYKVGFKTINAKLKVTRAHLKKIKGHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS*
Ga0137360_110964311	3300012361	Vadose Zone Soil	MVEQQKAKQYKVGFKTINAKLKVTKAHLEKIKAHVIKSDQKKIDDQIHAIDVIIAACRIR
Ga0137358_102033871	3300012582	Vadose Zone Soil	KVGFKTINAKLKITKAHLEKIKGHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS
Ga0137398_100757172	3300012683	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKGHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS*
Ga0137397_100891622	3300012685	Vadose Zone Soil	MVEQQKAKQYKVGFKTINAKLKVTRAHLKKIKGHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS*
Ga0137394_100952513	3300012922	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKGHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGN*
Ga0137359_103214173	3300012923	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKGHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGS*
Ga0137416_102003742	3300012927	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKGHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGR*
Ga0137404_101394512	3300012929	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKGHVIKSDQKKIDGQIHAIDVIIAACRIRMSATYTGSGR*
Ga0137404_120530511	3300012929	Vadose Zone Soil	MQFFCREGEMAKRFKVGFKTINAKLEVTKRHLNRIKKHVTKRDQKAIDAQVKAIDVILAACGKARMSVTYSGDSD*
Ga0137407_107268551	3300012930	Vadose Zone Soil	FKVGFKTINAKLEVTKRHLNRIKKHVTKRDQKAIDAQVKAIDVILAACGKARMSVTYSGDSD*
Ga0137410_100933304	3300012944	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKAHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS*
Ga0137420_12961512	3300015054	Vadose Zone Soil	MVEQQKAKQYKVGFKTINAKLKVTRKHLKKIKGHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS*
Ga0137412_104061702	3300015242	Vadose Zone Soil	MARKYKVGFKTINKKLEVTKKHLNKIKKHVTKRDQKVIAAQVEAIDVILAACGKDRMSHIYIGNVD*
Ga0137409_100119606	3300015245	Vadose Zone Soil	MVEQQKAKQYKVGFKTINAKLKVTKAHLEKIKAHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS*
Ga0182034_118209951	3300016371	Soil	EVQQRTKQTSMSRKTNSSIGGKEDKMAKTYKVGFKTINAKLAVTRRHLNKIKKQVKAKDQKAIAAQIQAIDVIMAACRVRMSATYTGNGK
Ga0179592_101346462	3300020199	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKEHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGS
Ga0210407_1000023312	3300020579	Soil	MARKYRVGFKTIIAKLVVTKKHLNKIKRHVIKRDQKEIAAQIQAIDVIISACRTRMSATYTGTGNGD
Ga0210407_100090202	3300020579	Soil	MAKQQKAKQYKVGFKTINAKLKVTREHLKRIKRHVIKSDQKKIDGQIEAIDVIIAACRIRMSATYTGSGS
Ga0210407_101050891	3300020579	Soil	AMARQYKVGFKTINAKLKVTKKHLIKIKKHVTKKDQQAIAAQIQAIDLILAACKTTKMSATYTGNDD
Ga0210407_101541472	3300020579	Soil	MAKQYKVGFKTINAKLKVTKEHLKRIKKHVVKGDQKKIDMQIEAIDVIIAACKSARMSVTYSGSND
Ga0210407_103727682	3300020579	Soil	MARQYKVGFKTINAKLMVTKKHLNKIKKHVTKKDQKAIAAQIQAIDVIMAACRIKMSATYTGTSD
Ga0210407_104208292	3300020579	Soil	MAKKFKVGYKTINAKLKVTRRHLNKIKKHVNTRDQKAIAAQIEAMDLIISVCKSARMSVTYNGSGS
Ga0210403_100180773	3300020580	Soil	MPKQFKVGYKTINAKLKVTRHHLNKIKKSVSAGDRKKIEAQIKAIDVIISACRSAKMSATYTGPSN
Ga0210403_100202765	3300020580	Soil	MARKYKVGFKTINEKLAVTKRHLNRIRKHVTKRDQKAIDAQVKAIDVILAACGKARMSVTYTGDTD
Ga0210403_100409153	3300020580	Soil	MAKKYKVGFKTINAKLAVTKKHLNKIKKHVTKRDQKVIDAQVKAIDVILAACGKGVMSHTYTGNYD
Ga0210403_100444104	3300020580	Soil	MPKQFKVGYKTINAKLKVTKHHLNKIKDKVSAGDRKKIDAQIKAIDVIITACKSARMSATYTGTRD
Ga0210403_100849402	3300020580	Soil	MARQYKVGFKTINAKLKVTKKHLIKIKKHVTKKDQQAIAAQIQAIDLILAACKTTKMSATYTGNDD
Ga0210399_100488921	3300020581	Soil	MAKKFKVGYKTINAKLRVTRHHLNKIKKHVNTRDQKAIAAQIEAMDLIISVCKSARMSVTYNGSGS
Ga0210399_102567622	3300020581	Soil	MPKKFKVGYKTINAKLKVTRHHLNKIKKAVSAGDRKKIEAQIKAIDVIIAACKSAKMSATYTGPNN
Ga0210401_100596782	3300020583	Soil	MAKKYKVGFKTINAKLQVTREHLKRIKRHVVKGDQKKIDMQIEAINVIIAACKTAKMSATYTGSDD
Ga0210401_104113192	3300020583	Soil	MAKQYKVGFKTINAKLMVTKKHLNKIKKKVTKKDQKAIAAQIQAIDLILTACKTTKMSVTYTGNDD
Ga0210401_105218262	3300020583	Soil	MPKKFKVGYKTVNAKLKVTRHHLNKIKKAVSAGDRKKIEAQIKAIDVIIAACRSAKMSATYTGPNN
Ga0210404_101748262	3300021088	Soil	MAKTYKVGFKTINAKLKVTKEHLARIKKLVNKTDQKKIAAQIQAIDVIIAACKTARMSATYTGNSD
Ga0210400_108766121	3300021170	Soil	MAKKYKVGFKTINAKLAVTKKHLNKIKKHVAKKHQKEIAAQIKAIDVILAACGKTGRMSATYGGGNN
Ga0210405_105911962	3300021171	Soil	MAKKYKVGFKTIIAKLAVTKKHLNKIKKHVIRKDQQAIAAQIEAIDVIISACRSRMSATYTGTGD
Ga0210388_111080811	3300021181	Soil	YKVGFKTINEKLAVTKRHLNRIRKHVTKRDQKAIDAQVKAIDVILAACGKARMSVTYTGDTD
Ga0210386_105398822	3300021406	Soil	KVGFKTINKKLEVTKKHLEKIKEHVTKRDKKVIAAQVKAIKVILAACGKDRMSHIYTGND
Ga0210394_101605403	3300021420	Soil	MAKKYKVGFKTINAKLQVTREHLKRIKKHVVKGDQKKIDMQIEAINVIIAACKTAKMSATYTGSDD
Ga0210384_101081792	3300021432	Soil	MAKKYKVGFKTINAKLQVTREHLRRIKKHVVKGDQKKIDTQIEAINVIIAACKTAKMSATYTGSDD
Ga0210384_106446912	3300021432	Soil	MAKQQKAKQYKVGFKTINAKLKVTREHLKRIKQHVIKSDQKKIDGQIEAIDVIIAACRIRMSATYTGSGS
Ga0210392_102648022	3300021475	Soil	MARQYKVGFKTINAKLKVTKKHLIKIKKHVTKKDQQAIAAQIQAIDLILAACKTTKMS
Ga0210392_112428802	3300021475	Soil	MPKKFKVGYKTINAKLKVTRHHLNKIKKAVSAGDRKKIEAQIKAIDVIIAACRSAKMSATYTGPNN
Ga0210398_108637561	3300021477	Soil	QYKVGFKTINAKLMVTKKHLNKIKKHVTKKDQKAIAAQIQAIDVIMAACRIKMSATYTGTSD
Ga0210410_103753211	3300021479	Soil	INAKLKVTRHHLNKIKKAVSAGDRKKIEAQIKAIDVIIAACKSAKMSATYTGPNN
Ga0210409_109225531	3300021559	Soil	FKTINAKLAVTKKHLNKIKKHVAKKHQKEIAAQIKAIDVILAACGKTGRMSATYGGGNN
Ga0179589_103441702	3300024288	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKAHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGS
Ga0137417_11182752	3300024330	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKEHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGR
Ga0137417_14397792	3300024330	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKVTRAHLKKIKGHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS
Ga0209240_10559342	3300026304	Grasslands Soil	MVEQQKAKQYKVGFKTINAKLKVTRKHLKKIKGHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS
Ga0209131_10996781	3300026320	Grasslands Soil	EGAMVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKEHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGR
Ga0209131_12013762	3300026320	Grasslands Soil	MVEQQKAKQYKVGFKTINAKLKVTRAHLKKIKGHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS
Ga0257146_10145542	3300026374	Soil	MAKSYKVGFKTINAKLKVTKNHLNKIKKHVVKKDQKVIAAQIQAIDLLLAACASGKMSKTYTGSGY
Ga0257147_10543251	3300026475	Soil	MAKKYKVGFKTINEKLAVTKRHLNKIKRHVVKKDQKVIAAQIQAIDLLLAACASGKMSKTYTGSGY
Ga0257153_10574082	3300026490	Soil	MVEQQKAKQYRVGFKTINAKLRVTKEHLKKIKRHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS
Ga0179587_101917681	3300026557	Vadose Zone Soil	FCAEGAMVEKQKAKQYKVGFKTINAKLKVTKAHLEKIKAHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGS
Ga0209004_10070601	3300027376	Forest Soil	MAKQYKVGFKTINAKLVVTKKHLNKIKKHVTKKDQKAIAAQIQAIDLILAACKTSKMSATYTGNDN
Ga0209076_10836592	3300027643	Vadose Zone Soil	MVEKQKAKQYKVGFKTINAKLKITKAHLEKIKGHVIKSDQKKIDDQIQAIKVIIAACRIRMSATYTGSGR
Ga0209736_11126282	3300027660	Forest Soil	GGMEGVMAKSYKVGFKTISAKLMVTKKHLNKIKKHVTKKDQKAIAAQIQAIDVIIAACKTTKMSATYTGTSD
Ga0208990_10548862	3300027663	Forest Soil	MVEQQKAKQYKVGFKTINAKLKVTKAHLKKIKGHVIKSDQKKIDAQIHAIDVIIAACRIRMSATYTGSGS
Ga0209626_10172402	3300027684	Forest Soil	MPKKFKVGYKTINAKLKVTRHHLNKIKRSVSAGDRKKIEAQIKAIDVILSACKSAKMSATYTGPSN
Ga0209166_100070143	3300027857	Surface Soil	MPRKFKVGYKTINAKLKVTRHHLNKIKKDVSAGDRKKIEAQIKAIDVIIAACKTAKMSVTYTGSSN
Ga0170834_1112505672	3300031057	Forest Soil	MAKKYKVGFKTINKKLAVTKKHLNKIKKHVTKSDQKVIAAQVEAIDVILAACGKDRMSHIYTGNDD
Ga0170834_1116489502	3300031057	Forest Soil	EGEMAKKYKVGFKTINAKLAVTKKHLNKIRKKVTKHDQKVIDAQVKAIDVILAACGKAVMSHTYTGNDD
Ga0318541_105650942	3300031545	Soil	MAKTYKVGFKTINAKLAVTRRHLNKIKKQVKAKDQKAIAAQIQAIDVIMAACRVRMSATYTGNGK
Ga0307469_100349312	3300031720	Hardwood Forest Soil	MPKKFKVGYKTVNAKLKVTRHHLNKIKKAVSAGDRKKIEAQIKAIDVIIAACKSAKMSATYTGPNN
Ga0307469_100808752	3300031720	Hardwood Forest Soil	MAKSYKVGFKTINAKLKVTKHHLNRIKKHVVKKDQKVIAAQIQAIDLLLAACISAKMSRTYTGSGY
Ga0307469_104098782	3300031720	Hardwood Forest Soil	MARKYKVGFKTINEKLQVTKRHLNKIKKHLKAGDRKKIEAQVQAIGVIIAACKTARMSVTYTADSD
Ga0307477_109752332	3300031753	Hardwood Forest Soil	LCTEGAMAIQQKAKQYKVGFKTINAKLKVTKKHLEAIRKHVVKSDQKKIDAQIQAIGVIIAACRIRMSATYTGSGS
Ga0307475_101812462	3300031754	Hardwood Forest Soil	MAKQQKAKQYKVGFKTINAKLKVAREHLKRIKRHVIKSDQKKIDGQIEAIDVIIAACRIRMSATYTGSGS
Ga0307475_102593342	3300031754	Hardwood Forest Soil	MAIQQKAKQYKVGFKTINAKLKVTKKHLEAIRKHVVKSDQKKIDAQIQAIGVIIAACRIRMSATYTGSGS
Ga0307478_111991972	3300031823	Hardwood Forest Soil	MPKKFKVGYKTINAKLRVTRHHLEKIKKRVSRKDQKDIAAQIKAMDVIISACKTARMSVTYTGSSN
Ga0306921_101725104	3300031912	Soil	MAKTYKVGFKTINAKLAVTRRHLNKIKKQVKAKDQKAIAAQIQAIDVIMAACRVRMSATYTG
Ga0310912_107261992	3300031941	Soil	MSRKTNSSIGGKEDKMAKTYKVGFKTINAKLAVTRRHLNKIKKQVKAKDQKAIAAQIQAIDVIMAACRVRMSATYTGNGK
Ga0310910_104263572	3300031946	Soil	MAKKYKVGFKTINAKLAVAKRHLNKIKKHVTARDQKAIAAQIQAIDVIMAACRVRMSATYTGNGK
Ga0307479_100478471	3300031962	Hardwood Forest Soil	MAIQQKAKQYKVGFKTINAKLKVTKQHLQRIKKHVVKSDQKKIDAQIQAIDVIIAACRVRMSATYTGSGS
Ga0307479_102102872	3300031962	Hardwood Forest Soil	MAKQYKVGFKTINAKLKVTRAHLQRIKKNVIKSDQKKIDAQIEAIDVIIAACRIRMSATYTGSGS
Ga0307479_102153573	3300031962	Hardwood Forest Soil	MAKQQKAKQYKVGFKTINAKLKVTREHLKRIKRHVIKSDQKKIDGQIEAIGVIIAACRIRMSATYTGSGS
Ga0307470_100488002	3300032174	Hardwood Forest Soil	MVKQQEAKQYKVGFKTINAKLKVTRAHLKKIKGHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS
Ga0307471_1000513433	3300032180	Hardwood Forest Soil	MPKKFKVGYKTINAKLKVTRHHLNKIKRKVTAGDRKKIEAQIKAIDVIIAACRTARMSATYTGSGN
Ga0307471_1008830252	3300032180	Hardwood Forest Soil	MAKQQEAKQYRVGFKTINAKLKVTRAHLKKIKGHVIKSDQKKIDDQIHAIDVIIAACRIRMSATYTGSGS
Ga0307471_1015687261	3300032180	Hardwood Forest Soil	KTINEKLQVTKRHLNKIKKHVKAGDRKKIEAQVQAIGVIIAACKTARMSVTYTAYSD
Ga0306920_1001097773	3300032261	Soil	MAKKYTVGFKTINAKLKVTRNHLSKIKKHVIASDQKVIAAQIDAIDTIIAACRTGKMSATYTGSGK
Ga0306920_1008690301	3300032261	Soil	MAKKYKVGFKTINAKLAVTKRHLKKIKKHVKANDQKAIAAQIQAIDVIMAACRVRMSATYTGNGK
Ga0335069_114268851	3300032893	Soil	MAKKYKVGFKTINAKLAVTKRHLNKIKKHVSPKDQKAIAAQIQAIDVIMGACKIKMSATYTGNGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086790

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences