Metagenome / Metatranscriptome Family F086747

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086747
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	91 residues
Representative Sequence	VGQEVAEIEGPGAERLARALRGLGAAATVLRTERGFRVGINGERDAVVELARAASGIERLTLRPASLEDVYFARTRDGAT
Number of Associated Samples	96
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.87 %
% of genes near scaffold ends (potentially truncated)	94.55 %
% of genes from short scaffolds (< 2000 bps)	92.73 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.545 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.636 % of family members)
Environment Ontology (ENVO)	Unclassified (29.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.85% β-sheet: 22.22% Coil/Unstructured: 50.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
d.139.1.1: PurM C-terminal domain-like	d1t3ta7	1t3t	0.6903
d.58.5.0: automated matches	d4e98a_	4e98	0.68812
d.58.5.0: automated matches	d4iyqa1	4iyq	0.68521
d.58.5.2: Divalent ion tolerance proteins CutA (CutA1)	d1nzaa_	1nza	0.68351
d.58.5.2: Divalent ion tolerance proteins CutA (CutA1)	d1ukua_	1uku	0.682

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01061	ABC2_membrane	75.45
PF00171	Aldedh	1.82
PF03091	CutA1	0.91
PF10264	Stork_head	0.91
PF03949	Malic_M	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.82
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.82
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.82
COG0281	Malic enzyme	Energy production and conversion [C]	0.91
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.91
COG1324	Divalent cation tolerance protein CutA	Inorganic ion transport and metabolism [P]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.55 %
Unclassified	root	N/A	5.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.55 %
Unclassified	root	N/A	5.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.55 %
Unclassified	root	N/A	5.45 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	34.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.27 %
Unclassified	root	N/A	5.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	34.55 %
Unclassified	root	N/A	5.45 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	33.64 %
Unclassified	root	N/A	5.45 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	33.64 %
Unclassified	root	N/A	5.45 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	33.64 %
Unclassified	root	N/A	5.45 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	33.64 %
Unclassified	root	N/A	5.45 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	33.64 %
Unclassified	root	N/A	5.45 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	33.64 %
Unclassified	root	N/A	5.45 %
Streptomyces sp. TAA204	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. TAA204	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10704865	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300003996\|Ga0055467_10150920	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300004114\|Ga0062593_100517123	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300004157\|Ga0062590_100048428	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2336	Open in IMG/M
3300004282\|Ga0066599_101010852	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300004463\|Ga0063356_100436679	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300004463\|Ga0063356_102233956	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300004479\|Ga0062595_102641520	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300004480\|Ga0062592_102346681	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300005093\|Ga0062594_102601603	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300005174\|Ga0066680_10467487	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300005345\|Ga0070692_11200427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	540	Open in IMG/M
3300005366\|Ga0070659_100094735	All Organisms → cellular organisms → Bacteria → Proteobacteria	2398	Open in IMG/M
3300005436\|Ga0070713_101962706	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300005439\|Ga0070711_100518117	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300005440\|Ga0070705_100890768	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005471\|Ga0070698_100663909	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300005518\|Ga0070699_100682335	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300005535\|Ga0070684_101342950	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	673	Open in IMG/M
3300005546\|Ga0070696_101162265	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005562\|Ga0058697_10244372	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300005564\|Ga0070664_100769654	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300005564\|Ga0070664_101860485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	571	Open in IMG/M
3300005615\|Ga0070702_100665364	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300005843\|Ga0068860_101965160	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	606	Open in IMG/M
3300005873\|Ga0075287_1009942	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300005884\|Ga0075291_1034886	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005884\|Ga0075291_1037419	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005884\|Ga0075291_1038434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	621	Open in IMG/M
3300005887\|Ga0075292_1036954	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005893\|Ga0075278_1011237	All Organisms → cellular organisms → Bacteria → Proteobacteria	1164	Open in IMG/M
3300006845\|Ga0075421_102572732	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006853\|Ga0075420_100842882	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300006871\|Ga0075434_102236720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	550	Open in IMG/M
3300006954\|Ga0079219_12432801	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300009147\|Ga0114129_11969503	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	707	Open in IMG/M
3300010039\|Ga0126309_10940040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	576	Open in IMG/M
3300010041\|Ga0126312_11080639	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	589	Open in IMG/M
3300010044\|Ga0126310_11767347	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	515	Open in IMG/M
3300010400\|Ga0134122_12901506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	533	Open in IMG/M
3300010868\|Ga0124844_1258438	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	607	Open in IMG/M
3300011429\|Ga0137455_1154789	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012212\|Ga0150985_100046261	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300012349\|Ga0137387_10832157	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	668	Open in IMG/M
3300012353\|Ga0137367_10480411	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300012530\|Ga0136635_10013720	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300012530\|Ga0136635_10110509	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300012684\|Ga0136614_10940917	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300012917\|Ga0137395_11091579	Not Available	566	Open in IMG/M
3300012951\|Ga0164300_10948408	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012955\|Ga0164298_10247364	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300012961\|Ga0164302_10323956	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300012961\|Ga0164302_11113279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	624	Open in IMG/M
3300014326\|Ga0157380_12380820	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300015200\|Ga0173480_10272777	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300015372\|Ga0132256_101164100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	885	Open in IMG/M
3300017997\|Ga0184610_1013913	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2074	Open in IMG/M
3300018027\|Ga0184605_10478426	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	545	Open in IMG/M
3300018071\|Ga0184618_10339241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	641	Open in IMG/M
3300018071\|Ga0184618_10422134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	563	Open in IMG/M
3300018422\|Ga0190265_11666318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	748	Open in IMG/M
3300018429\|Ga0190272_11926983	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300018465\|Ga0190269_11784636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. TAA204	524	Open in IMG/M
3300019255\|Ga0184643_1199193	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	633	Open in IMG/M
3300019377\|Ga0190264_10926504	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300019878\|Ga0193715_1039237	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300020022\|Ga0193733_1094491	Not Available	836	Open in IMG/M
3300021080\|Ga0210382_10205346	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300022756\|Ga0222622_10593181	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	799	Open in IMG/M
3300025901\|Ga0207688_10674142	Not Available	653	Open in IMG/M
3300025917\|Ga0207660_11378658	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	571	Open in IMG/M
3300025944\|Ga0207661_11844383	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300025981\|Ga0207640_10623818	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	915	Open in IMG/M
3300026041\|Ga0207639_11964830	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300026067\|Ga0207678_10800789	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300026088\|Ga0207641_11648376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	643	Open in IMG/M
3300027577\|Ga0209874_1062236	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300027657\|Ga0256865_1144206	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300027665\|Ga0209983_1136448	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	561	Open in IMG/M
3300028380\|Ga0268265_11026691	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	816	Open in IMG/M
3300028589\|Ga0247818_10563468	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300028711\|Ga0307293_10053717	All Organisms → cellular organisms → Bacteria → Proteobacteria	1254	Open in IMG/M
3300028784\|Ga0307282_10160637	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300028784\|Ga0307282_10633993	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	518	Open in IMG/M
3300028796\|Ga0307287_10152858	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300028811\|Ga0307292_10079839	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300028812\|Ga0247825_10012614	All Organisms → cellular organisms → Bacteria	5523	Open in IMG/M
3300028812\|Ga0247825_10773226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	692	Open in IMG/M
3300028814\|Ga0307302_10258058	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300028814\|Ga0307302_10370763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	707	Open in IMG/M
3300028824\|Ga0307310_10409793	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	674	Open in IMG/M
3300028872\|Ga0307314_10135813	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	700	Open in IMG/M
3300028884\|Ga0307308_10234333	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300028885\|Ga0307304_10153608	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300028885\|Ga0307304_10404484	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300028885\|Ga0307304_10622637	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	501	Open in IMG/M
3300030620\|Ga0302046_10559338	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300031538\|Ga0310888_10923371	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300031548\|Ga0307408_102463601	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	506	Open in IMG/M
3300031824\|Ga0307413_11827840	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300032002\|Ga0307416_102130072	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	662	Open in IMG/M
3300032004\|Ga0307414_11624585	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300032004\|Ga0307414_11787679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	573	Open in IMG/M
3300032005\|Ga0307411_11380339	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300032013\|Ga0310906_10856164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	646	Open in IMG/M
3300032180\|Ga0307471_102916521	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	607	Open in IMG/M
3300033551\|Ga0247830_10330515	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.64%
Host-Associated	Host-Associated	26.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.82%
Plants	Host-Associated → Plants	26.36%
Aquatic	Environmental → Aquatic	11.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.00%
Freshwater	Environmental → Aquatic → Freshwater	5.45%
Sediment	Environmental → Aquatic → Sediment	5.45%
Marine	Environmental → Aquatic → Marine	0.91%
Phylloplane	Host-Associated → Plants → Phylloplane	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.64%
Loam	Environmental → Terrestrial → Soil → Loam	11.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.45%
Ice	Environmental → Aquatic → Freshwater → Ice	2.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.82%
Pond	Environmental → Aquatic → Freshwater → Pond	0.91%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.91%
Sand	Environmental → Terrestrial → Soil → Sand	0.91%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.18%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.91%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.36%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	5.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.64%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.73%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.82%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.91%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.91%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_107048652	3300001686	Soil	PADRVVLLSAGRVVAQDAPDRLRAGLGDEMAEIEGPGAERLARALRGLGAARMIVRTGRGFRVGLAGPREPVVELAGGAPEVSRFALRPVSLEDVYFAATRDADEVIEAVPA*
Ga0055467_101509202	3300003996	Natural And Restored Wetlands	EAEPADRVVLLAAGRVVAQDAPDRLRAGLGEEMAEIEGPGAERLTRALRGLGAARTILRTGRGYRVGLVGPREPVVELAGGAPEVARFALRPVSLEDVYFASTRSADEAAEAVPA*
Ga0062593_1005171232	3300004114	Soil	VLLARGRVVADDAPGALRAELGEEIAEIEGPGADRLARAIRGLGAARVVLKTGRGIRAGITGQREPVVELAGGAPGIERFTLRPTTLEDVYFARTQSHADADVPEPV*
Ga0062590_1000484281	3300004157	Soil	GPGADRLARAIRGLGAARVVLKTGRGIRAGITGQREPVVELAGGAPGIERFTLRPTTLEDVYFARTQSHADADVPEPV*
Ga0066599_1010108521	3300004282	Freshwater	EIDGPGADRLARALRGLGVAASVVRTERGYRVGITGEREAVIELATAAPGIERLALRPASLEDAYFAQTRAADGDGGGGETGA*
Ga0063356_1004366793	3300004463	Arabidopsis Thaliana Rhizosphere	TVGDEVAEIDGPGAERLARALRGLGAVTELLRTERGFRIGLRGPREPIVELAGGAPGITRLLLRAPSLEDVYFARTQDARSPAEEVVA*
Ga0063356_1022339561	3300004463	Arabidopsis Thaliana Rhizosphere	PADRVVLLSRGQVVADDDPGSLRAAIGVEVAEIEGPGAERLARALRGLGATSAVLQTERGFRVGIARDRDAVIELATAAAGIERLALRPATLEDVYFARTRGSAA*
Ga0062595_1026415202	3300004479	Soil	GTPAALRAAVGMEVAEIEGPGAERLARAIRGLGATATVLQTDRGFRVGITGERESVMELATSAPGIERLAVRPATLEDAYFAHTREGAA*
Ga0062592_1023466812	3300004480	Soil	DAPGALRAELGEEIAEIEGPGADRLARAIRGLGAARVVLKTGRGIRAGITGQREPVVELAGGAPGIERFTLRPTTLEDVYFARTQSHADADVPEPV*
Ga0062594_1026016031	3300005093	Soil	VLLSQGRVVADDDPGALRATIGAEVAEIEGPGAERLVRALRGLGATTTVLRTERGYRVGIARDREAVIELAAVAAGIERLLLRPASLEDVYFARTRGEAA*
Ga0066680_104674871	3300005174	Soil	RAVADDTPAALRAAVGAEVAEIEGPGAERLARALRGLGATTAVLRTDRGFRVGIQGDRDAVVELATAAPGIERLALRPSSLEDAYFARARDGAA*
Ga0070692_112004272	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RGRIVASDTPAALRDTVGAEVAEVEGPGAERLVQALRGLGAVTLVVRSERGFRVGLRNSREAVIELAGTAPGIERFALRPTTLEDVYFAKTQLGD*
Ga0070659_1000947351	3300005366	Corn Rhizosphere	APDRLRAGLGEEMAEIEGPGAERLTRALRGLGAARTILRTGRGYRVGLVGPREPVVELAGGAPEVARFALRPVSLEDVYFASTRSGDEAAEAVPA*
Ga0070713_1019627062	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AVADDTPAALRGAVGQEVAEIEGPGAERLARALRGLGAAATVLQTDRGFRVGIRGERDAVVELATAAPGIERLSLRPVSLEDAYFARTREGAA*
Ga0070711_1005181172	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LRSSIGAEVAEIEGPGAERLVRALRGLGAVATVLRTERGFRVGIARDREAVIELATVAEGVERFAFRPASLEDVYFARTRGGEA*
Ga0070705_1008907681	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	SRGRAVADGTPAALRAAVGMEVAEIEGPGAERLARAIRGLGATATVLQTDRGFRVGITGERESVMELATSAPGIDRLAVRPTTLEDAYFAHTREGVA*
Ga0070698_1006639091	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VAEIEGPGAERLARAIRGLGATATVLRTDRGFRVGITGERESVMELATSAPGIERLAVRPATLEDAYFAHTREGVA*
Ga0070699_1006823351	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VGAEVAEIEGPGAERLARALRGLGATTAVLRTDRGFRVGIQGDRDAVVELATAAPGIERLALRPSSLEDAYFARTRDGTA*
Ga0070684_1013429502	3300005535	Corn Rhizosphere	LRAALGEEMAEIEGSGAERLARALRGLGAARTILRTGRGYRVGLVGPREPVVELAGAAPEVARFALRPVSLEDVYFASTRSGDEAAEAVPA*
Ga0070696_1011622651	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AEIEGPGAERLARALRGLGAAATVLETDRGFRVGIRGERDAVVELATAASGIERLSLRPASLEDAYFARTREGAA*
Ga0058697_102443722	3300005562	Agave	EGPGAERLARALRGLGAAVTVLRTERGFRVGIGREREAAVEMATSAPGIERLALRPASLEDVYFARTGGGAA*
Ga0070664_1007696541	3300005564	Corn Rhizosphere	ASIGAEVAEIEGPGAERLVRALRGLGATATVLRTERGYRVGIARDREAVIELATVAAGIERLLLRPASLEDVYFARTRGEAA*
Ga0070664_1018604852	3300005564	Corn Rhizosphere	LLSRGRVVADDDPTTLRASIGGEVAEIDGPGAERLVQALRGLGAAATVLRTERGYRVGIGRDRDAAIELATAAPGIERLALRAPSLEDVYFARTRGAAA*
Ga0070702_1006653642	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LRAELGEEIAEIEGPGADRLARAIRGLGAARVVLRTGRGIRAGITGQREPVVELAGGAPGIERFTLRPTTLEDVYFARTQSHADADVPEPV*
Ga0068860_1019651602	3300005843	Switchgrass Rhizosphere	ALRDTVGAEVAEVEGPGAERLVKALRGLGAVTLVVRSERGFRVGLRNSREAVVELAGTAPGIERFALRPTTLEDVYFAKTQLGD*
Ga0075287_10099421	3300005873	Rice Paddy Soil	GPGAERLVKALTGLGATRTRVKTQRGYRVGLSGGRDAVVELAGTAPGIERFTLRPPTLEDVYFARTQGGAESTPLATSWSA*
Ga0075291_10348861	3300005884	Rice Paddy Soil	PGAERLVRALRGLGATTAVLRTEQGYRVGIGGPREAVVELAGGAPGIERLALRPATLEDAYFARPRDGAA*
Ga0075291_10374192	3300005884	Rice Paddy Soil	GRAVADDAPTALRASVGAEVAEVEGPGAERLARAVRGLGAAATVLRTERGYRLGLIGDREAVIELATPAAGIERLALRPATLEDVYFARTGGSAA*
Ga0075291_10384342	3300005884	Rice Paddy Soil	MADIEGPGAERLARALRGLGAARTILRTERGYRVGLTGPREPVVELAGSAPEVTRFALRPVTLEDVYFASARPAADATEAVPA*
Ga0075292_10369542	3300005887	Rice Paddy Soil	RVVLLSRGRAVANDTPTALRAAVGAEVAEIEGPGAERLVRALRGLGATTAVLRTEQGYRVGIGGPREAVVELAGGAPGIERLALRPATLEDAYFARTRDGAA*
Ga0075278_10112371	3300005893	Rice Paddy Soil	RGRAVANDTPAALRAAVGVEVAEIEGPGAERLVRALRGLGATTAVLRTEQGYRVGIGGPREAVVELAGGAPGIERLALRPATLEDAYFARTRDGAA*
Ga0075421_1025727321	3300006845	Populus Rhizosphere	DDTPGTLRAELGEEIAEIEGPGAERLARAIRGLGAARVVLQTGRGIRAGITGQREPVVELAGGAPGIERFTLRPTTLEDVYFARTQGHAAADMPEPV*
Ga0075420_1008428821	3300006853	Populus Rhizosphere	VVLLSRGLAVASDTPTALRATVGREVAEIEGPGADRLARALRGLGVATAVLRTERGYRVGISGQREAVIELATTAQGIDRLALRGATLEDVYFAVTRGADDRAPSGGDGREAAG*
Ga0075434_1022367201	3300006871	Populus Rhizosphere	GAEVAEIEGPGAQRLVRALRGLGATSTVLETERGYRVGIARDREAVIELAAVAAGIERLLLRPASLEDVYFARTRGEAA*
Ga0079219_124328012	3300006954	Agricultural Soil	RLARAVRGLGAAATVLRTERGYRVGIAADREAVIELATAAAGIERLALRPATLEDVYFARTIGTDA*
Ga0114129_119695032	3300009147	Populus Rhizosphere	VILLARGKVVGDDPPELLRSAFGEEVAEIEGPGAQRLVRALRGLGAVKTILQTERGFRVGLTGEREPIVELAGAATGVNRLSLRPATLEDAYFARTQDGIQWAP*
Ga0126309_109400402	3300010039	Serpentine Soil	EMEGPGAERLARALRGLGSVVTLLATERGFRVGLRGEREALLGLTMDAPGIERLALRPATLEDAYFTRTRPGLT*
Ga0126312_110806392	3300010041	Serpentine Soil	ASDAPATLKATIGLDVAEIEGPGAEGLANALCRVRAAEIRVRTERGFRVGLTGQRDAVIELAGTAPGIVRFAIRPTTLEDVYFARTQQLPDSIQ*
Ga0126310_117673472	3300010044	Serpentine Soil	GPGAERLARALRGLGAAGTVLRSERGFRVGIVREREGVMALATSAPGIERLAVRPTTLEDVYFAHTLEAAL*
Ga0134122_129015062	3300010400	Terrestrial Soil	AEVAEVDGPGAERLVKALRGLGAVATVVRTERGFRVGLGDSREPVIELAATAPGIERFTLRPATLEDVYFARTQVTQ*
Ga0124844_12584382	3300010868	Tropical Forest Soil	VTLRSSIGVEVAEIEGPGAERLVRALRGLGAAVTVLRTERGYRVGIAREREAVVELATVAAGIERLTFRPVSLEDAYFARTRGDAA*
Ga0137455_11547892	3300011429	Soil	VGQEVAEVEGTGAERLVKALRGLGAAASSMRTERGFRVGLSGSREAVVELAGSAPGIKRFALRPTTLEDVYFALTQNSTEVM*
Ga0150985_1000462611	3300012212	Avena Fatua Rhizosphere	SPVALKAVLGVEVAEIEGPGAERLVQALCGLGAVQSRVRTDRGLRIGLTDQRDAVIELAGAAAGILRFAIRPATLEDVYFARTERLGSS*
Ga0137387_108321572	3300012349	Vadose Zone Soil	VVLLAGGEVVASDTPAALRAGVGDEVAEMEGPGAETLARALRGLGSVITFLKTERGFRVGLRGEREAVVALAMDAPGIDHLALRPASLEDAYFARTQPGMR*
Ga0137367_104804111	3300012353	Vadose Zone Soil	PGAERLARALRGLGSVVTFLRTERGFRVGLKGEREAVVALAMDAPGIEHLALRPASLEDAYFARTQPEMR*
Ga0136635_100137201	3300012530	Polar Desert Sand	DRVVLLSRGSVVANDTPAVLRATVGQEVAEIEGPGAERLVKALRGLGAAAGSMRTERGFRIGLSGSREAVVELAGSAPGIERFSLRPATLEDVYFALTQRPVEESSRPLAKVT*
Ga0136635_101105091	3300012530	Polar Desert Sand	DTPGVLRAAVGVEVAELEGPGAERLARALRGLGAAGTVLRTDRGFRVGITGERNAVMELATAAPGIERLALRPATLEDAYFARTRADPDASGRPERDPADVPQALA*
Ga0136614_109409172	3300012684	Polar Desert Sand	GQEVAEIEGPGAERLVKALRGLGAAESSVRTERGFRVGLRESREAVVELAGSAPGIGRFTLRPATLEDVYFAKTRTTSHG*
Ga0137395_110915792	3300012917	Vadose Zone Soil	VANDLPAALRDSVGAEVAEIEGAGADRLVKALRGLGAVMTVVRTERGFRVGLRNSREAVVELAGTSPGIERFTLRPASLEDVYFARTQLGG*
Ga0164300_109484082	3300012951	Soil	EGPGAERLVRPLRGLGAVATVFRTERGFRVGIARDREAVIELATVADGVERFAFRPASLEDVYFARTRGGEA*
Ga0164298_102473641	3300012955	Soil	GPGAERLVRALRGLGATTTVLRTERGYRGGIARDREAVIELAAVAAGIERLLLRPASLEDVYFARTRGEAA*
Ga0164302_103239562	3300012961	Soil	AAYNPTTLRASIGGEVAEIDGPGAERLVQALRGLGAAATVLRTERGYRVGIGRDRDAAIELATAAPGIERLALRAPSLEDVYFARTRGAAA*
Ga0164302_111132791	3300012961	Soil	AEVAEIDGRGAERLVRALRGLGAVATVLKTERGYRVGIARERQAVIELATAAAGIERLLFRPASLEDVYFARTRGAAV*
Ga0157380_123808202	3300014326	Switchgrass Rhizosphere	EAESADRVILLSSGRVVASDSPAVLKANVGVEVAEIEGPGADRLTQALCGLGAVQSRVRTDRGLRIGLTGEREAVIELAGNAPGILRFAIRPATLEDVYFANTEQLSPT*
Ga0173480_102727772	3300015200	Soil	ADRVVLLAAGRVVAQDAPDRLRARLGEEMAEIEGPGAERLTRALRGLGAARTILRTGRGYRVGLVGPREPVVELAGGAPEVARFALRPVSLEDVYFASTRSGDEAAEAVPA*
Ga0132258_1001829116	3300015371	Arabidopsis Rhizosphere	ADIDGPGAERLARALRGLGAARTIFRTGRGFRVGLVGPREPVVELAGSAPDVTRFALRPVSLEDVYFASTRGTDEPAEPVPA*
Ga0132256_1011641001	3300015372	Arabidopsis Rhizosphere	YLTEAEPADRVVLLAAGRVVAQDAPDRLRAGLGEEMADIDGPGAERLARALRGLGAARTIFRTGRGFRVGLVGPREPVVELAGGAPDVTRFALRPVSLEDVYFASTRGTDEPAEPVPA*
Ga0184610_10139131	3300017997	Groundwater Sediment	ALRATVGLEVAEIEGSGAERLVKALRGLGAAASSVHTERGFRIGLTGSREAVVELAGSAPGIDRFALRPATLEDVYFARTTTATA
Ga0184605_104784261	3300018027	Groundwater Sediment	VGAEVAEIEGSGAERLVKALRGLGAVTTAVLTERGFRVGLRNSREAVAELAGAAPGIERFTLRSSMLEDVYFAKTQGAQ
Ga0184618_103392412	3300018071	Groundwater Sediment	GPGAERLARAIRGLGATATVLQTDRGFRVGITGERESVMELATSAPGIERLAIRPATLEDAYFAHTREGAA
Ga0184618_104221341	3300018071	Groundwater Sediment	DSPVALQATIGVEVAQIEGPGAERLAKALCGLGAAQTTGRTERGFRVGLSGERDAVIELAGTAPGIVRFALRPATLEDVYFARTQQMTPT
Ga0190265_116663181	3300018422	Soil	IAEIEGPGAERLTRALRGLGSTRVVLRTGRGYRVGIAGEREPVVELAGKAPGIDRFALRPTSLEDVYFARTQDAGEAAAR
Ga0190272_119269832	3300018429	Soil	GAPGALRAELGEGIAEIEGPGAERLARALRGLGSTRVVLRTGRGYRVGIAGEREPVVELAGKAPGIERFALRPTSLEDVYFARTQDAGEGAAS
Ga0190269_117846361	3300018465	Soil	AEPADRVILLSRGEVVAEGDPAVLRDELGAEVAEIEGSGAERLARALRGLGSATVVLRTERGYRVALRGPREPVVELAGGAPDIERFSLRYSTLEDVYFARTQEAVR
Ga0184643_11991931	3300019255	Groundwater Sediment	KSTIGVEVAEIEGPGAERLAKALCGLGAAQTTVRTERGFRVGLTGERDAVIELAGTAPGIVRFALRPATLEDVYFARTQQMTPT
Ga0190264_109265041	3300019377	Soil	EAEPADRVLLLAQGKVVAEDTPGALRAELGEGIAEIEGPGAERLARALRGLGSTRVVLRTGRGYRVGIAGDREPIVELAGKAPGIERFALRPTSLEDVYFARTQVAGEGAAW
Ga0193715_10392371	3300019878	Soil	IEGPGAERLVKALRGLGAAASSVRTERGFRIGLTGSREAVVELAGSAPGIQRFALRPATLEDVYFALTQRPADEPDRVLALP
Ga0193733_10944912	3300020022	Soil	VVLLARGRVVASDAPAALRETVGTEVAEIDGSGAERLVKALRGLGAVTTAMRTERGFRAGLRNSREAVVELAGTAPGIERFTLRPATLEDVYFAKTQ
Ga0210382_102053462	3300021080	Groundwater Sediment	VADGTPAALRAAVGAEVAEIEGPGAERLARAIRGLGATATVLQTDRGFRVGITAERESVMELATSAPGIERLAIRPATLEDAYFAHTREGAA
Ga0222622_105931811	3300022756	Groundwater Sediment	TGRVVASDSPAALKATIGVEVAEIEGPGAERLAKALCGLGAAQTTGRTERAFRVGLSGERDAVIELAGSAPGIVRFALRPATLEDVYFARTQPAGH
Ga0207688_106741422	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VRPATEAEPADRVVLLAAGRVVAQDAPDRLRAGLGEEMADIDGPGAERLARALRGLGAARTIFRTGRGFRVGLVGPREPVVELAGGAPDVTRFALRPASL
Ga0207660_113786582	3300025917	Corn Rhizosphere	RVVADDEPAALRAGIGAEVAEIEGPGAERLVRALRGLGAVTSVLQTERGYRVGIAREREAVIELATAAVGIERLLLRAASLEDVYFARTRAADAA
Ga0207661_118443831	3300025944	Corn Rhizosphere	EAEPADRVVLLAAGRVVAQDAPDRLRAGLGEEMADIDGPGAERLARALRGLGAARTIFRTGRGFRVGLVGPREPVVELAGGAPDVTRFALRPVSLEDVYFASTRGADEAAEPVPA
Ga0207640_106238181	3300025981	Corn Rhizosphere	QDAPDRLRARLGKEMAEIEGPGAERLTRALRGLGAARTILRTGRGYRVGLVGPREPVVELAGGAPEVARFALRPVSLEDVYFASTRSGDEAAEAVPA
Ga0207639_119648301	3300026041	Corn Rhizosphere	AAIGAEVAEIEGPGAERLARAIRGLGATATVLRTDRGFRVGITGERESVMELATSAPGIERLAVRPVTLEDAYFAHTREGAA
Ga0207678_102286103	3300026067	Corn Rhizosphere	EMAEIEGPGAERLTRALRGLGAARTILRTGRGYRVGLVGPREPVVELAGGAPEVARFALRPVSLEDVYFASTRSGDEAAEAVPA
Ga0207678_108007891	3300026067	Corn Rhizosphere	ATIGTEVAELEGPGAERLARALRGLGAAGTVLRTERGFRVGIVREREGVMALATSAPGIERLAVRPTTLEDVYFAHTLEAAG
Ga0207641_116483762	3300026088	Switchgrass Rhizosphere	PSALRASIGAEVAEIEGPGAERLVRALRGLGATATVLRTERGYRVGIARDREAVIELATVAAGIERLLLRPASLEDVYFARTRGEAA
Ga0209874_10622362	3300027577	Groundwater Sand	RARLGDEVAEIEGPGAERLARAIRGLGGARTVLQTERGFRVGLTGPREPVIELAGSAPGVERLTLRAPTLEDVYFAKTQ
Ga0256865_11442061	3300027657	Soil	YLAEAEPADRVLLLAQGKVVAEDAPGALRAELGEGIAEIEGPGAERLARALRGLGSTRVVLRTGRGYRVGIAGEREPVVELAGKAPGIERFALRPTSLEDVYFARTQDPGEVAAS
Ga0209983_11364481	3300027665	Arabidopsis Thaliana Rhizosphere	APDRLRAGLGEEMAEIEGPGAERLTRALRGLGAARTILRTGRGYRVGLVGPREPVVELAGGAPEVARFALRPVSLEDVYFASTRSADEAAEAVPA
Ga0268265_110266912	3300028380	Switchgrass Rhizosphere	RAGLGEEMAEIEGPGAERLTRALRGLGAARTILRTGRGYRVGLVGPREPVVELAGGAPEVARFALRPVSLEDVYFASTRSGDEAAEAVPA
Ga0247818_105634682	3300028589	Soil	LLARGRVVADDAPGALRAELGEEIAEIEGPGADRLARAIRGLGAARVVLRTGRGIRAGITGQREPVVELAGGAPGIERFTLRPTTLEDVYFARTQSHADADVPEPV
Ga0307293_100537171	3300028711	Soil	AEPADRVVLLAGGEVVASDTPAALRAAVGDEVAEMEGPGAERLARALRGLGSVVTFLKTERGFRVGLKGEREAVVALAMDAPGIEHLSLRPASLEDAYFARTRPGMR
Ga0307282_101606371	3300028784	Soil	TIGVEVAEIEGPGAERLAKALCGLGAAQTTGRTERGFRVGLSGERDAVIELAGSAPGIVRFALRPATLEDVYFARTQPAGH
Ga0307282_106339931	3300028784	Soil	EAEASDRVVLLSSGRVVANDMPAALRATVGLEVAEIEGPGAERLVKALRGLGAAASSVRTERGFRIGLTGSREAVVELAGSAPGIQRFALRPATLEDVYFALTQRPADEPDRVLALP
Ga0307287_101528582	3300028796	Soil	AALKATIGVEVAEIEGPGAERLAKALCGFGATQTTVRTERGFRVGLTGERDAVIELAGTAPGIVRFALRPATLEDVYFARTQQMTPA
Ga0307292_100798393	3300028811	Soil	PSISATSADTPAALRAAVGDEVADIEGPGAERLARALRGLGAVVTFLKTERGFRVGFSGEREAVVALAMAAPGIERLALRPASLEDAYFARTQAGTR
Ga0247825_100126141	3300028812	Soil	VVADDAPGVLRAELGEEIAEIEGPGADRLARAIRGLGAARVVLKTGRGIRAGITGQREPVVELAGGAPGIERFTLRPTTLEDVYFARTQSHADADVPEPV
Ga0247825_107732262	3300028812	Soil	HLVTQDAPDRLRAALGDEMAEIEGSGAERLARALRGLGAARTIRRTGRGYRVGLVGPREPVVELAGVAPEVARFALRPVSLEDVYFASTGSADEAAEAVPA
Ga0307302_102580582	3300028814	Soil	ATIGVEVAEIEGPGAERLAKALCGLGAAQTTARTERGFRVGLSGERDAVIELAGSAPGIVRFALRPATLEDVYFARTQPPGH
Ga0307302_103707631	3300028814	Soil	AVGAEVVEIEGPGAERLARAIRGLGATATVLQTDRGFRVGITGERESVMELATSAPGIERLAVRPATLEDAYFAHTRKGAA
Ga0307310_104097932	3300028824	Soil	PAALRAAVGDEVADIEGPGAERLARALRGLGAVVTFLKTERGFRVGFSGEREAVVALAMAAPGIERLALRPASLEDAYFARTQAGTR
Ga0307314_101358131	3300028872	Soil	EGPGAERLAKALCGLGAAQTTGRTERAFRVGLSGERDAVIELAGSAPGIVRFALRPATLEDVYFARTQPAGH
Ga0307308_102343331	3300028884	Soil	RGRAVADGTPAALRAAVGMEVAEIEGPGAERLARAIRGLGATATVLQTDRGFRVGITAERESVMELATSAPGIERLAIRPATLEDAYFAHTREGAA
Ga0307304_101536082	3300028885	Soil	VVLLAMGRVVASDSPAALKATIGVEVAEIEGPGAEQLAKALCGLGAAQTTGRTERGFRVGLSGERDAVIELAGSAPGIVRFALRPATLEDVYFARTQPAGH
Ga0307304_104044842	3300028885	Soil	AGVGDEVAELEGPGAERLARALRGLGSVVTFLETERGFRIGVRGEREAVVALAMDAPGIERLALRPASLEDAYFAKTRPGPT
Ga0307304_106226372	3300028885	Soil	VVASDTPAALRAAVGDEVAEMEGPGAERLARALRGLGSVVTFLKTERGFRVGLKGEREAVVALAMDAPGIEHLSLRPASLEDAYFARTRPGMR
Ga0247827_100571711	3300028889	Soil	EEMAEIEGPGAERLTRALRGLGAARTILRTGRGYRVGLVGPREPVVELAGGAPEVARFALRPVSLEDVYFASTRSADEAAEAVPA
Ga0302046_105593382	3300030620	Soil	AELGEGIAEIEGPGAERLARALRGLGSTRVVLRTGRGYRVGIAGEREPVVELAGKAPGIERFALRPTSLEDVYFARTQDPGEAAAS
Ga0310888_109233712	3300031538	Soil	AELGEEIAEIEGPGAERLARAIRGLGAARVVLQTGRGIRAGITGQREPVVELAGGAPGIERFTLRPTTLEDVYFARTQGHAAADLPEPV
Ga0307408_1024636011	3300031548	Rhizosphere	RLVRALRGLGATATVLQTERGYRVGINGVREAVIELAGAAPGIERLALRPATLEDAYFAHTREGSG
Ga0307413_118278401	3300031824	Rhizosphere	AGGRVVAHDTPAALRATVGDEVAEIDGPGAERLARALRGLGAVTELLRTERGFRVGLRGPREPVVELAGGAPGITRLLLRASSLEDVYFARTQDTPTPAGEAVT
Ga0307416_1021300722	3300032002	Rhizosphere	IGAEVAEIEGPGAERLARAIRGLGATGTLLRTDRGFRVGITSEREAVMELATSAPGIDRLALRPATLEDAYFAHTLGGTV
Ga0307414_116245851	3300032004	Rhizosphere	RVVLLAHGRVVADATPGALRAELGDEIAEIEGPGAERLTRALRGLGSARVVLRTGRGFRVGITAERQAVVELAGRAPGIERFALRPTSLEDVYFAKTQDAVEAEAG
Ga0307414_117876791	3300032004	Rhizosphere	LLSRGVAIADGTPASLRRAVGAEVAEIEGPGAERLVRALRGLGATATVLQTERGYRVGINGAREAVIELAGAAPGIERLVLRPATLEDAYFAHTREGSG
Ga0307411_113803391	3300032005	Rhizosphere	VVLLAGGRVVAHDTPAALRATVGDEVAEIDGPGAERLARALRGLGAVTELLRTERGFRVGLRGPREPVVELAGGAPGITRLLLRASSLEDVYFARTQDTPTPAGEAVT
Ga0310906_108561641	3300032013	Soil	QDAPDRLRAGLGEEMADIDGPGAERLARALRGLGAARTIFRTGRGFRVGLVGPREPVVELAGGAPDVTRFALRPVSLEDVYFASTRGTDEPAEPVPA
Ga0307471_1029165211	3300032180	Hardwood Forest Soil	VGQEVAEIEGPGAERLARALRGLGAAATVLRTERGFRVGINGERDAVVELARAASGIERLTLRPASLEDVYFARTRDGAT
Ga0247830_103305152	3300033551	Soil	ADRVVLLAAGRVVAQDAPDRLRAALGEEMADIDGPGAERLARALRGLGAARTIFRTGRGFRVGLVGPREPVVELAGGAPEVTRFALRPVSLEDVYFASTRGADGAAELVPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086747

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences