NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F086730

Metagenome Family F086730

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F086730
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 98 residues
Representative Sequence VSLRRSSIEQELTLPDGRTAQLRVGMAHDSYLPEREEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIAALASGHIEPTASALEQYADRLR
Number of Associated Samples 90
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 43.64 %
% of genes near scaffold ends (potentially truncated) 35.45 %
% of genes from short scaffolds (< 2000 bps) 90.91 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (59.091 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(10.909 % of family members)
Environment Ontology (ENVO) Unclassified
(23.636 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.636 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.80%    β-sheet: 31.20%    Coil/Unstructured: 44.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00160Pro_isomerase 64.55
PF01594AI-2E_transport 20.00
PF00583Acetyltransf_1 5.45
PF00188CAP 0.91
PF07690MFS_1 0.91
PF01391Collagen 0.91
PF13673Acetyltransf_10 0.91
PF00296Bac_luciferase 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0652Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin familyPosttranslational modification, protein turnover, chaperones [O] 64.55
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 20.00
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.91
COG2340Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domainCell cycle control, cell division, chromosome partitioning [D] 0.91


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.09 %
UnclassifiedrootN/A40.91 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352025|deepsgr__Contig_45772All Organisms → cellular organisms → Bacteria2015Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_11042893All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria750Open in IMG/M
3300000956|JGI10216J12902_107481562Not Available523Open in IMG/M
3300000956|JGI10216J12902_109095449Not Available1620Open in IMG/M
3300001537|A2065W1_10985230All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300001538|A10PFW1_11187277All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1470Open in IMG/M
3300002568|C688J35102_118994061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria623Open in IMG/M
3300002568|C688J35102_120831544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1732Open in IMG/M
3300002568|C688J35102_120832808All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1737Open in IMG/M
3300002568|C688J35102_120919342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2335Open in IMG/M
3300004114|Ga0062593_101155143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria809Open in IMG/M
3300004157|Ga0062590_100100127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1832Open in IMG/M
3300004157|Ga0062590_100108541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1782Open in IMG/M
3300005093|Ga0062594_101186105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium755Open in IMG/M
3300005093|Ga0062594_102096385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria608Open in IMG/M
3300005093|Ga0062594_102824403Not Available540Open in IMG/M
3300005179|Ga0066684_11055093Not Available522Open in IMG/M
3300005184|Ga0066671_10156358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1334Open in IMG/M
3300005294|Ga0065705_10038673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1411Open in IMG/M
3300005332|Ga0066388_100139671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2984Open in IMG/M
3300005364|Ga0070673_100868072Not Available836Open in IMG/M
3300005435|Ga0070714_100448786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1225Open in IMG/M
3300005435|Ga0070714_101112432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium770Open in IMG/M
3300005439|Ga0070711_101213318All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300005445|Ga0070708_100254251All Organisms → cellular organisms → Bacteria1651Open in IMG/M
3300005468|Ga0070707_101702784Not Available598Open in IMG/M
3300005471|Ga0070698_100343970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1423Open in IMG/M
3300005526|Ga0073909_10273855Not Available758Open in IMG/M
3300005615|Ga0070702_101128295Not Available628Open in IMG/M
3300005615|Ga0070702_101141500Not Available625Open in IMG/M
3300005618|Ga0068864_101484177Not Available681Open in IMG/M
3300005718|Ga0068866_10895916All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300005764|Ga0066903_100060856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4718Open in IMG/M
3300005764|Ga0066903_100197832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3000Open in IMG/M
3300005764|Ga0066903_101693110All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1204Open in IMG/M
3300005764|Ga0066903_103736629Not Available818Open in IMG/M
3300006028|Ga0070717_10514380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1083Open in IMG/M
3300006046|Ga0066652_101421777All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria648Open in IMG/M
3300006854|Ga0075425_102431697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria581Open in IMG/M
3300009012|Ga0066710_100762982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1480Open in IMG/M
3300009090|Ga0099827_10072268All Organisms → cellular organisms → Bacteria2668Open in IMG/M
3300009098|Ga0105245_11408394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria747Open in IMG/M
3300009137|Ga0066709_100634643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1527Open in IMG/M
3300009148|Ga0105243_10335535All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1383Open in IMG/M
3300009176|Ga0105242_10686526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1000Open in IMG/M
3300009840|Ga0126313_10224442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1450Open in IMG/M
3300010036|Ga0126305_10296746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1048Open in IMG/M
3300010044|Ga0126310_10245541Not Available1204Open in IMG/M
3300010044|Ga0126310_10438942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium939Open in IMG/M
3300010045|Ga0126311_10600923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria871Open in IMG/M
3300010322|Ga0134084_10465650Not Available506Open in IMG/M
3300010362|Ga0126377_12695819All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300010375|Ga0105239_11501691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria779Open in IMG/M
3300011003|Ga0138514_100002338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2487Open in IMG/M
3300012204|Ga0137374_10188416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1791Open in IMG/M
3300012212|Ga0150985_107432104Not Available660Open in IMG/M
3300012350|Ga0137372_10057672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3395Open in IMG/M
3300012350|Ga0137372_10340937Not Available1150Open in IMG/M
3300012353|Ga0137367_10846582Not Available633Open in IMG/M
3300012355|Ga0137369_10164889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1745Open in IMG/M
3300012358|Ga0137368_10910880Not Available535Open in IMG/M
3300012360|Ga0137375_10336347Not Available1347Open in IMG/M
3300012360|Ga0137375_10467591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1082Open in IMG/M
3300012469|Ga0150984_102370460All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300012469|Ga0150984_106927955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1003Open in IMG/M
3300012469|Ga0150984_118030138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria986Open in IMG/M
3300012532|Ga0137373_10429326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1021Open in IMG/M
3300012972|Ga0134077_10450859Not Available563Open in IMG/M
3300012977|Ga0134087_10221395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium856Open in IMG/M
3300012989|Ga0164305_10877954All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium751Open in IMG/M
3300012989|Ga0164305_11208279Not Available655Open in IMG/M
3300012989|Ga0164305_11884840Not Available542Open in IMG/M
3300013296|Ga0157374_12295564Not Available567Open in IMG/M
3300014497|Ga0182008_10745803Not Available563Open in IMG/M
3300014745|Ga0157377_11258576Not Available576Open in IMG/M
3300015371|Ga0132258_13738429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1038Open in IMG/M
3300017659|Ga0134083_10251452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium740Open in IMG/M
3300018027|Ga0184605_10444115All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300018061|Ga0184619_10047894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1852Open in IMG/M
3300018071|Ga0184618_10205752All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria824Open in IMG/M
3300018076|Ga0184609_10187966All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium960Open in IMG/M
3300018431|Ga0066655_10144990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1401Open in IMG/M
3300018433|Ga0066667_11760735All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300021080|Ga0210382_10341039All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11661Open in IMG/M
3300021445|Ga0182009_10716572Not Available543Open in IMG/M
3300022694|Ga0222623_10253417Not Available679Open in IMG/M
3300025899|Ga0207642_10675989Not Available649Open in IMG/M
3300025916|Ga0207663_10517434Not Available929Open in IMG/M
3300025922|Ga0207646_10383821Not Available1269Open in IMG/M
3300025922|Ga0207646_11743963Not Available534Open in IMG/M
3300025928|Ga0207700_11137185Not Available698Open in IMG/M
3300025929|Ga0207664_11149289Not Available693Open in IMG/M
3300025936|Ga0207670_11367291Not Available601Open in IMG/M
3300025944|Ga0207661_10813949Not Available860Open in IMG/M
3300025960|Ga0207651_10682708Not Available904Open in IMG/M
3300026075|Ga0207708_10925772Not Available755Open in IMG/M
3300027821|Ga0209811_10107563All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1007Open in IMG/M
3300027882|Ga0209590_10073498Not Available1975Open in IMG/M
3300028718|Ga0307307_10167863All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11689Open in IMG/M
3300028755|Ga0307316_10282571Not Available606Open in IMG/M
3300028778|Ga0307288_10021375Not Available2079Open in IMG/M
3300028824|Ga0307310_10028369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2237Open in IMG/M
3300028884|Ga0307308_10181784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1007Open in IMG/M
3300031199|Ga0307495_10160010Not Available590Open in IMG/M
3300031549|Ga0318571_10136668Not Available836Open in IMG/M
3300031765|Ga0318554_10734910Not Available553Open in IMG/M
3300031779|Ga0318566_10546059Not Available566Open in IMG/M
3300031938|Ga0308175_100785206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1041Open in IMG/M
3300031996|Ga0308176_12410470Not Available561Open in IMG/M
3300032067|Ga0318524_10468575Not Available660Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.91%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.18%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.45%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.55%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.55%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.64%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.64%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.73%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.82%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.82%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.82%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.91%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.91%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.91%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.91%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.91%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.91%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.91%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001537Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deepsgr_004513102199352025SoilVSLRSGAIEHELTLPDGRTALLRVGMANDGYIPASEEETVVVELRIGRFAVAALNTVLDPDQEDEAAELSRELVEGLQSGRIEPTAAALEQYADRLR
ICChiseqgaiiFebDRAFT_1104289323300000363SoilVSLRSSAIQRELTLPDGRAALLRVGMANDGYIPASEEETVVVELRIGRFAVAALNTVLDPDQEDEAAELSRELVEGLQSGRIEPTAAALEQYADRLR*
JGI10216J12902_10748156213300000956SoilMSLRGSSIEQELTLPDGRTAALRIGMAHDGYIPEREEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIAALATGRIPPTAGALEQYADRLR*
JGI10216J12902_10909544933300000956SoilVSLRSGAIEHELTLPDGRTALLRVSMANDGYIPASEEETVVVELRIGRFAVAALNTVLDPDQEDEAEELSRELLEGLQSGRIEPTAAALEQYADRLR*
A2065W1_1098523013300001537PermafrostPDGRTAQVRVGMANDDYIPAREEQTVVLELRVGDHVLATLNTVLEPEQEDAATELAREVVAGLGSGHITPTAAALEQYADRLR*
A10PFW1_1118727723300001538PermafrostVTLPDGRTAQVRVGMAHDDYIPAREEQTVVLELRVGDHVLATLNTVLEPEQEDAATELAREVVAGLGSGHITPTAAALEQYADRLR*
C688J35102_11899406123300002568SoilNPPFMSLRGSSIEQDLTLPDGRTAQLRIGMAHDSYLPEREEETVILELRIDGHVAATVNTVLDPEQDEGANELAREVIEALGSGHIEPTASALEQYADRLR*
C688J35102_12083154433300002568SoilMSLRGSSIEQDLTLPDGRTAQLRIGMAHDSYIPEREEETVILELRIDGHVAATVNTVLDPEQDEEANELAREVIEALGSGHIEPTASALEQYADRLR*
C688J35102_12083280833300002568SoilMSLRGSSIEQDLTLPDGRTAQLRIAMAHDSYLPEREEETVILELRIDGHVAATVNTVLDPEQDEEANELAREVIEALGSGHIE
C688J35102_12091934213300002568SoilMSLRGSSIEQDLTLPDGRTAQLRIGMAHDSYIPEREEETVILELRIDGHVAATVNTVLDPDQEEEANDLAREVIEALGSGHIEPTASALEQYADRLR*
Ga0062593_10115514323300004114SoilMSLRQSSIEQELTLPDGRTAALRIGMAHDSYIPEREEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIEALATGRIPPTAGALEQYADRLR*
Ga0062590_10010012723300004157SoilVTLPDGREGLVSIGMAHDSYLPPREEETVVLELRFGRHVEAALNTVLDPEHEREATALVREIVEGLEAGRIEPTAAALEQYADRLP*
Ga0062590_10010854123300004157SoilMSLRQSSIEQELTLPDGRTAALRIGMAHDSYIPEREEETVVLELRIGGHVAASLNTVLDPEQDDEANELAREVIEALATGRIPPTAGALEQYADRLR*
Ga0062594_10118610523300005093SoilMSLRGGSIDQELTLPDGRSAQLHIGMAHDGYIPEREEQTVVLELRIGGHVTASLNTVLDPEQDDEANELAREVIAALASGRIPPTAGALEQYADRLR*
Ga0062594_10209638513300005093SoilMSLRDRSVDQELTLPDGRTAQLHIGMAHDGYIPEREEETVVLELRIGGHVAASLNTVLDPQQEDEANELAREVIEALGSGHIEPTAAALEQYADRLR*
Ga0062594_10282440323300005093SoilVSLRSGPIEHELTLPDGRAAHLRVGMANDSYIPAAEEETVVVELRIGRFAVAALNTVLDPDQEDEAAELSRELVEGLESGRIEPTAKALEQYADRLR*
Ga0066684_1105509323300005179SoilVSLRRSSIEQELTLPDGRTAQVRIGMAHDSYLPPREEETVILEVRIGGHVAATVNTVLEPEQEDEANELAREVIDALASGHVEPTAA
Ga0066671_1015635843300005184SoilRTAQLRVGMAHDSYLPEREEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIAALASGHIEPTASALEQYADRLR*
Ga0065705_1003867323300005294Switchgrass RhizosphereVSLRSGAIEHELTLPDGRTALLRVGMANDGYIPASEEETVVVELRIGRFAVAALNTVLDPDQEDEAAELSRELVEGLQSGRIEPTAAALEQYADRLR*
Ga0066388_10013967163300005332Tropical Forest SoilRAHRTFPQESPAMSLRGSSIDQELTLPDGRTAQLHIGMAHDGYIPEREEETVVLELRIGGHVAASVNTVLDPEQEDEANELAREVIAALASGRIPPTAGALEQYADRLR*
Ga0070673_10086807223300005364Switchgrass RhizosphereMSLRQSSIEQELTLPDGQTASLRIGMAHDSYIPEREEETVVIEIRIGGRVAASLNTVLDPEQEDEANELAREVIAALATGRIPPTAGALEQYADRLR*
Ga0070714_10044878633300005435Agricultural SoilMGRTFHGPFQEESAAMSLRGTSIEQELTLPDGRVALLRVGMAHDSYLPENEEETVVLELRIDGHVAATVNTVLEPDQEDEANELAREVIDALGSGHIPPTAAALEQYADRLR*
Ga0070714_10111243223300005435Agricultural SoilMRGAVSLRITPIEQDVTLPDGRTATVRVALAEDGYIPAREEETVVLELRFGRHVEAALNTVLDPDQDAEANELAREVIAGLASGRIEPTASALEPYADTLR*
Ga0070711_10121331823300005439Corn, Switchgrass And Miscanthus RhizosphereMSLRNSAIEQELTLPDGRTAALRIALAHEGYIPEREEETVILELRIGGHVAATLNTVLDPDQEDEANELAREVIEALGSGHIPPTASALEQYADRLR*
Ga0070708_10025425133300005445Corn, Switchgrass And Miscanthus RhizosphereVSLRSAAIEHEVTLPDGRQGQLRVGMANDGYIPAAEEETVVVELRIGRFVTAALNTVLDPEQEDEATELSRELVEGLQSGRIEPTAAALEQYADRLR*
Ga0070707_10170278423300005468Corn, Switchgrass And Miscanthus RhizosphereVSLRSTAIEHELTLPDGREAQLRIGMANDSYIPAAEEETVVVELRIGRFVEVALNTVLEPEQEDEASELSRELVEGLQSGHIQPTAAALEQYADRLR*
Ga0070698_10034397023300005471Corn, Switchgrass And Miscanthus RhizosphereVSLRSTAIEHELTLPDGREAQLRIGMANDGYIPAAEEETVTVELRIGRFVEVALNTVLEPEQEDEASELSRELVEGLQSGHIQPTAAALEQYADRLR*
Ga0073909_1027385523300005526Surface SoilSTLHSVSLRSGAIEHELTLPDGRAAHLRVGMANDGYIPASEEETVVVELRVGRFAVAALNTVLDPDQEDEAAELSRELVEGLQSGRIEPTAAALEQYADRLR*
Ga0070702_10112829513300005615Corn, Switchgrass And Miscanthus RhizosphereVSLRSGPIEHELKLPDGRAAHLRVGMANDAYIPAAEEETVVVELRIGRFAVAALNTVLDPDQEDEAAELSRELVEGLESGRIEPTAAALEQYAD
Ga0070702_10114150023300005615Corn, Switchgrass And Miscanthus RhizosphereMSLRQSSIEQELTLPDGRTAELRIGMAHDSYIPEREEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIAALATGRIPPTAGALEQYADRLR*
Ga0068864_10148417713300005618Switchgrass RhizosphereGRITGMSLRQSSIEQELTLPDGQTASLRIGMAHDSYIPEREEETVVIEIRIGGRVAASLNTVLDPEQEDEANELAREVIAALATGRIPPTAGALEQYADRLR*
Ga0068866_1089591623300005718Miscanthus RhizosphereMSLRQSSIEQELTLPDGQTASLRIGMAHDSYIPEREEETVVIEIRIGGHVAASLNTVLDPEQEDEANELAREVIEALATGRIPPTAGALEQYADRLR*
Ga0066903_10006085633300005764Tropical Forest SoilMSLRGNSVEQELTLPDGRVALLHIGMARDGYIPENEEETVVLELRIDGHVAASINTVLEPEQDDEANELAREVIEALGSGQIPPTAAALEQYADRLR*
Ga0066903_10019783253300005764Tropical Forest SoilMSLRNSSIEQELTLPDGRTAALHIGMAHDGYLPEREEETVILELRIGGHVVASLNTVLDPEQEDEANELAREVIDALGSGHIEPTAAALEQYADRLR*
Ga0066903_10169311033300005764Tropical Forest SoilGRTAQLHIGMAHDGYIPEREEETVVLELRIGGHVAASINTVLDPEQEEEANELAREVIAALASGRIPPTAGALEQYADRLR*
Ga0066903_10373662923300005764Tropical Forest SoilVSLRNSAIEQELTLPDGRTAALRIALAHDGYIPEREEETVILELRIGSHVAATLNTVLDPDQEDEANDLAREVIEALGSGHIPPTAAALEQYADRLR*
Ga0070717_1051438033300006028Corn, Switchgrass And Miscanthus RhizosphereMGRTFHGPFQEESAAMSLRGTSIEQELTLPDGRIALLRVGMAHDSYLPENEEETVVLELRIDGHVAATVNTVLEPDQEDEANELAREVIDALGSGHIPPTAAALEQYADRLR*
Ga0066652_10142177723300006046SoilVTLPDGRRAKLRVGMAHDSYLPPREEETVILEVRIGGHVAATVNTVLDPEQDDEANELAREVIDALASGHVEPTASALEQYADRLR*
Ga0075425_10243169723300006854Populus RhizosphereMSLRQSSIEQELTLPDGRTAALRIGMAHDGYIPEREEETVVLELRIGRHVAASLNTVLDPEQEEEANELAREVIEALATGRIPPTAGALEQYADRLR*
Ga0066710_10076298223300009012Grasslands SoilVSLRSTPIEHELTLPDGRKAQVTVGLAQDGYIRAREQETVVLELRIGRFVEASLNTVLDPSQEDAATELAREVVAGLEAGRITPTAAALEQYADRLR
Ga0099827_1007226813300009090Vadose Zone SoilMTRSAATGGSIPEPPDVSSTLPASVSLRRNTIEHELTLPDGQTVQVRVGMAHDGYIPAREEETVVLELRIGRHVAAALNTVLDPAQEEAATELAREVVEGLASGRIEPTAAALEQYADRLR*
Ga0105245_1140839423300009098Miscanthus RhizosphereVSLRSGPIEHELKLPDGRAAHLRVGMANDAYIPAAEEETVVVELRIGRFAVAALNTVLDPDQEDEAAELSRELVEGLESGRIEPTAKALEQYADRLR*
Ga0066709_10063464323300009137Grasslands SoilVTVGLAQDGYIRAREQETVVLALGIGRFVEASPHAVLDPSQEDAATELAREVVAGLEAGQITPTAASLEQYADRLR*
Ga0105243_1033553523300009148Miscanthus RhizosphereVSLRSGPIEHELKLPDGRAAHLRVGMANDAYIPAAEEETVVVELRIGRFAVAALNTVLDPDQEDEAAELSRELVEGLESGRIEPTAAALEQYADRLR*
Ga0105242_1068652623300009176Miscanthus RhizosphereMSLRGGSIDQELTLPDGRTAQLHIGMAHDGYIPEREEQTVVLELRIGGHVTASLNTVLDPEQDDEANELAREVIAALASGRIPPTAGALEQYADRLR*
Ga0126313_1022444223300009840Serpentine SoilMSLRGSSIEQDLTLPDGRTAQLRIGMAHDSYLPEREEETVILELRIGGHVAATVNTVLDPEQDEEANELAREVIEALASGHIAPTASALEQYADRLR*
Ga0126305_1029674623300010036Serpentine SoilMSLRGSSIEQDLTLPDGRTAQLRIGMAHDSYIPEREEETVILELRIGGHVAATVNTVLDPEQDEEANELAREVIEALGSGHIAPTASALEQYADRLR*
Ga0126310_1024554133300010044Serpentine SoilVSLRSDAIEHDLTLPDGRTAQVRVGMAHDGYIPEREEETVVLEVRIGRFVVATLNTVLDPSQDEAAADLAREVVEALASGHVEPTASALEQYADRLR*
Ga0126310_1043894223300010044Serpentine SoilMSLRGSSIEQDLTLPDGRTAQLRIGMAHDSYLPEREEETVILELRIDGHVAATVNTVLDPEQDEEANELAREVIEALGSGHIAPTASALEQYADRLR*
Ga0126311_1060092323300010045Serpentine SoilVSLRSESIEHELTLPDGRTAQVRVGMAHDSYIPEREEETVVLEVRIGRFVEATLNTVLDPAQEEAAAELAREVVEALASGHVAPTASALEQYADRLR*
Ga0134084_1046565013300010322Grasslands SoilASVSLRSTSIEHELTLPDGRKAQVRVGMAHDEYIPPREDQTVVLELRVGDHVLAALNTVLDPEQADEAEELAREVSEALGSGHITPTAATLEQYADRLR*
Ga0126377_1269581923300010362Tropical Forest SoilLSLRDSGIEQELTLPDGRTAVLRIAVAHDGYIPEREEETVILELRIGGHVAATLNTVLDPDQEDEANELAREVIEALGSGRVPPTATALEQYADQLR*
Ga0105239_1150169123300010375Corn RhizosphereMSLRQSSIEQELTLPDGQTASLRIGMAHDSYIPEREEETVVIEIRIGGRVAASLNTVLDPEQEDEANELAREVIEALATGRIPPTASALEQYADRLR*
Ga0138514_10000233833300011003SoilLEPLSLRSNTIEHELTLPDGQAAQVRVGMAHDGYIPAREEETVVLELRMGRHVVAALNTVLDPAQEAAAAELAREVVEGLESGHIEPTAAALEQYADQLR*
Ga0137374_1018841613300012204Vadose Zone SoilMAHDGYIPPREEETVILEVRIGGHVAATLNTVLDPVQEEAATALAGEVVDALASGHIEPTASALEQYADRLR*
Ga0150985_10743210423300012212Avena Fatua RhizosphereLRGSSIEQDLTLPDGRTAQLRIGMAHDSYIPEREEETVILELRIDGHVAATVNTVLDPEQDEEANELAREVIEALGSGHIEPTASALEQYADRLR*
Ga0137372_1005767243300012350Vadose Zone SoilMTRSAIGESIPDPPDVSITLPRRSVSLRSTTIEHELTLPDGQTAQVRVGMAHDGYIPEREEETVVLELRIGRFVVAALNTVLDPAQEEEATELAREVVAGLESGHIAPTAAALEQYADRLR*
Ga0137372_1034093713300012350Vadose Zone SoilMTRSATAGSISDPPDVPLRSRSLSLRSTAIEHEVTLPDGRIAQVRVGMAHDGYIPPREEETVILEVRIGGHVAATLNTVLDPVQEEAATELAGEVVDALASGHIEPTASALEQYADRLR*
Ga0137367_1084658213300012353Vadose Zone SoilRSAIGESIPDPPDVSITLPRRSVSLRSTTIEHELTLPDGQTAQVRVGMAHDGYIPEREEETVVLELRIGRFVVAALNTVLDPAQEEEAIELAREVVAGLESGHIAPTAAALEQYADRLR*
Ga0137369_1016488923300012355Vadose Zone SoilMTRSATAGSISDLPDVPLRSRSLSLRSTAIEHEVTLPDGRIAQVRVGMAHDGYIPPREEETVILEVRIGGHVAATLNTVLDPVQEEAATALAGEVVDALASGHIEPTASALEQYADRLR*
Ga0137368_1091088013300012358Vadose Zone SoilVTLPDGRTAQVRVGMAHDGYIPPREEETVILEVRIGGHVAATLNTVLDPVQEEAATELAGEVVDALASGHIEPTASALEQYADRLR*
Ga0137375_1033634743300012360Vadose Zone SoilDLPDVPLRSRSLSLRSTAIEHEVTLPDGRIAQVRVGMAHDGYIPPREEETVILEVRIGGHVAATLNTVLDPVQEEAATALAGEVVDALASGHIEPTASALEQYADRLR*
Ga0137375_1046759133300012360Vadose Zone SoilKRMTRSATAGSISDPPDVPLRSRSLSLRSTAIEHEVTLPDGRTAQVRVGMAHDGYIPPREEETVILEVRIGGHVAATLNTVLDPVQEEAATELAGEVVDALASGHIEPTASALEQYADRLR*
Ga0150984_10237046013300012469Avena Fatua RhizosphereMSLRGSSIEQDLTLPDGRTAQLRIGMAHDSYLPEREEETVILELRIDGHVAATVNTVLDPEQDEEANELAREVIEALGSGHIEPTASALEQYADRLR*
Ga0150984_10692795533300012469Avena Fatua RhizosphereSIEQDLTLPDVRTAQLRIGMAHDSYIPEREEETVILELRIDGHVAATVNTVLDPEQDEEANELAREVIEALGSGHIEPTASALEQYADRLR*
Ga0150984_11803013813300012469Avena Fatua RhizosphereRGSSIEQDLTLPDGRTAQLRIGMAHDSYIPEREEETVILELRIDGHVAATVNTVLDPDQEEEANDLAREVIEALGSGHIEPTASALEQYADRLR*
Ga0137373_1042932613300012532Vadose Zone SoilVPLRSRSLSLRSTAIEHEVTLPDGRIAQVRVGMAHDGYIPPREEETVILEVRIGGHVAATLNTVLDPVQEEAATELAGEVVDALASGHIEPTASALEQYADRLR*
Ga0134077_1045085923300012972Grasslands SoilRSSIEQELTLPDGRSAQLRVGMAHDSYLPEREEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIAALASGHIEPTASALEQYADRLR*
Ga0134087_1022139523300012977Grasslands SoilVSLRRSSIEQELTLPDGRTAQLRVGMAHDSYLPEREEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIAALASGHIEPTASALEQYADRLR*
Ga0164305_1087795423300012989SoilMSLRQSSIEQELTLPDGQTAALHIGMAHDAYIPEREVETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIEALASGRIPPTAGALEQYADRLR*
Ga0164305_1120827923300012989SoilVSLYTSAIEQELTLPDGRTAALWIGIAHDGYIPEREEATVILELRIGGHVAATLNTVLDPDQEDEANELAREVIEALGSGHIPPTATALEQYADRLR*
Ga0164305_1188484023300012989SoilVSLRSTAIEHELTLPDGREAQLRIGMANDGYIPASEEETVVVELRIGRFAVAALNTVLDPDQEDEAAELSRELVEGLQSGRIEP
Ga0157374_1229556413300013296Miscanthus RhizosphereMSLRQSSIEQELTLPDGQIASLRIGMAHDSYIPEREEETVVIEIRIGGRVAASLNTVLDPEQEDEANELAREVIAALATGRIPPTAGALEQYADRLR*
Ga0182008_1074580323300014497RhizosphereSSIEQDLTLPDGQTAALRIGMAHDAYIPEREEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIEALATGRIPPTAGALEQYADRLR*
Ga0157377_1125857613300014745Miscanthus RhizosphereRVSGRIIRMSLRQSSIEQELTLPDGQTASLRIGMAHDSYIPEREEETVVIEIRIGGRVAASLNTVLDPEQEDEANELAREVIEALATGRIPPTAGALEQYADRLR*
Ga0132258_1373842923300015371Arabidopsis RhizosphereMSLRHSSIEQEVTLPDGRTAALRIGMAHDSYIPEREEETVVLEIRIGGHVAASLNTVLDPQQEDEANELAREVIAALATGRIPPTAGALEQYADRLR*
Ga0134083_1025145223300017659Grasslands SoilLSLRSTTIEHELTLPDGQTAQVRVGMAHDGYIPAREEETVVLELRIGRFVAAALNTVLDPAQEEEATELAREVVEGLESGRIEPTAAALEQYADRLR
Ga0184605_1044411513300018027Groundwater SedimentVSLRSTAIEHELTLPDGRPAQLRVGMANDGYIPAAEEETVVVELRIGRFVEVALNTVLDPEQEDEATELSRELLDGLRSGRIEPTAAALEQYADRLR
Ga0184619_1004789433300018061Groundwater SedimentVSLRSTAIEHELTLPDGRPAQLRVGMANDGYIPAAEEETVVVELRIGRFVAVALNTVLDPEQEDEATELSRELLDGLRSGRIEPTAAALEQYADRLR
Ga0184618_1020575223300018071Groundwater SedimentVSLRSNTIEHELTLPDGQTAQVRVGMAHDGYIPAREEETVVLELRMGRHVVAALNTVLDPAQEAAANELAREVVEGLESGHIAPTAAALEQYADRLR
Ga0184609_1018796613300018076Groundwater SedimentVSLRSTAIEHELTLPDGRPAQLRVGMANDGYIPAAEEETVVVELRIGRFVAVALNTVLDPEQEDEATELSRELLDGLQSGRIEPTAAALEQYADR
Ga0066655_1014499023300018431Grasslands SoilVSLRRSSIEQELTLPDGRTAQLRVGMAHDSYLPEREEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIAALASGHIEPTASALEQYADRLR
Ga0066667_1176073523300018433Grasslands SoilVCHRPEDHARIGRFRSGFQGESAAVSLRRSSIEQEVTLPDGRSAQLRVGMAHDSYLPEREEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIAALASGHIEPTASALEQYADRL
Ga0210382_1034103923300021080Groundwater SedimentIEHELTLPDGETAQVRVGMAHDGYIPAREEETVVLELRMGRHVVAALNTVLDPAQEEAAAELAREVVEGLESGRIEPTAAALEQYADRLR
Ga0182009_1071657223300021445SoilMSLRRSSIEQELTLPDGQTAALRIGMAHDAYIPEREEETVVLELRIAGHVAASLNTVLDPEQEDEANELAREVIEALATGRIPPTAGALEQYADRLR
Ga0222623_1025341723300022694Groundwater SedimentVSLRSTAIEHELTLPDGRPAQLRVGMANDGYIPAAEEETVVVELRIGRFVAVALNTVLDPEQEDEATELSRELLDGLQSGRIEPTAAALEQYADRLR
Ga0207642_1067598923300025899Miscanthus RhizosphereMSLRQSSIEQELTLPDGQTASLRIGMAHDSYIPEREEETVVIEIRIGGHVAASLNTVLDPEQEDEANELAREVIEALATGRIPPTASALEQYADRLR
Ga0207663_1051743413300025916Corn, Switchgrass And Miscanthus RhizosphereFRGESASMSLRNSAIEQELTLPDGRTAALRIALAHEGYIPEREEETVILELRIGGHVAATLNTVLDPDQEDEANELAREVIEALGSGHIPPTASALEQYADRLR
Ga0207646_1038382113300025922Corn, Switchgrass And Miscanthus RhizosphereVSLRSAAIEHEVTLPDGRQGQLRVGMANDGYIPAAEEETVVVELRIGRFVAAALNTVLDPEQEDEATELSRELVEGLQSGRIEPTAAALEQYA
Ga0207646_1174396323300025922Corn, Switchgrass And Miscanthus RhizosphereDVALPDGRTARVRVAMAHDDYIPAREEQTVVLELRVGEHVLATLNTVLEPEQEDAAKELAREVVAGLGSGHIPPTASALEQYADRLR
Ga0207700_1113718523300025928Corn, Switchgrass And Miscanthus RhizosphereRAGRFVRVWWRIHPSMSLRRSSIEQDLTLPDGRTAQLRIAMAHDSYLPEREEETVILELRIDGHVAATVNTVLEPDQEDEANELAREVIDALGSGHIPPTAAALEQYADRLR
Ga0207664_1114928923300025929Agricultural SoilMGRTFHGPFQEESAAMSLRGTSIEQELTLPDGRVALLRVGMAHDSYLPENEEETVVLELRIDGHVAATVNTVLEPDQEDEANELAREVIDALGSGHIPPTAAALEQYADRLR
Ga0207670_1136729113300025936Switchgrass RhizosphereRTAQLHIGMAHDGYIPEREEETVVLELRIGGHVAASLNTVLDPQQEDEANELAREVIEALGSGHIEPTAAALEQYADRLR
Ga0207661_1081394923300025944Corn RhizosphereMSLRQSSIEQELTLPDGRTAALRIGMAHDSYIPEREEETVVLELRIGGHVAASLNTVLDPEQDDEANELAREVIEALATGRIPPTAGALEQYADRLR
Ga0207651_1068270823300025960Switchgrass RhizosphereMSLRQSSIEQELTLPDGQTASLRIGMAHDSYIPEREEETVVIEIRIGGRVAASLNTVLDPEQEDEANELAREVIAALATGRIPPTAGALEQYADRLR
Ga0207708_1092577213300026075Corn, Switchgrass And Miscanthus RhizosphereVSLRSTSIEHELTLPDGRIAQVRVGMAHDGYIPEREEETVVLEVRIGRFVEATLNTVLDPAQEAAAVELAHEVVAALASGHVQPTAAALEQ
Ga0209811_1010756333300027821Surface SoilVSLRSGAIEHELTLPDGRAAQLRVGMANDSYIPAAEEETVVLELRIGGHVAASLNTVLDPEQEDEANELAREVIEALATGRIPPTAGALEQYADRLR
Ga0209590_1007349853300027882Vadose Zone SoilMTRSAATGGSIPEPPDVSSTLPASVSLRRNTIEHELTLPDGQTVQVRVGMAHDGYIPAREEETVVLELRIGRHVAAALNTVLDPAQEEAATELAREVVEGLASGRIEPTAAAL
Ga0307307_1016786313300028718SoilRNTIERELTLPDGQTAQVRVGMAHDGYIPAREEETVVLELRMGRHVVAALNTVLDPAQEAAAAELAREVVDGLESGHIEPTAAALEQYADRLR
Ga0307316_1028257123300028755SoilESRTGRTFWPRFVENPASMSLRGSSIEQDLTLPDGRTAQLRIGMAHDSYIPEREEETVILELRIDGHVAATVNTVLDPEQDEEANDLAREVIEALGSGHIEPTASALEQYADRLR
Ga0307288_1002137523300028778SoilMSLRGSSIEQDLTLPDGRTAQLRIGMAHDSYIPEREEETVILELRIDGHVAATVNTVLDPEQDEEANDLAREVIEALGSGHIEPTASALEQYADRLR
Ga0307310_1002836923300028824SoilVSLRSNTIEHELTLPDGQTAQVRVGMAHDGYIPAREEETVVLELRMGRHVVAALNTVLDPAQEAAAAELAREVVDGLESGHIEPTAAALEQYADRLR
Ga0307308_1018178413300028884SoilDGQTAQVRVGMAHDGYIPAREEETVVLELRMGRHVVAALNTVLDPAQEAAAAELAREVVDGLESGHIEPTAAALEQYADRLR
Ga0307495_1016001023300031199SoilVSLRSGAIEHELTLPDGRTALLRVGMANDGYIPASEEETVVVELRIGRFAVAALNTVLDPDQENEAAELARELVEGLQSGRIEPTAAALEQYADRLR
Ga0318571_1013666823300031549SoilMSLRDNSIEQELTLPDGRIALLHIGIAHDGYIPEKEEETVVLELRIDGHVAASINTVLDPDQDDEANELAREVIEALGTGHIPPTAAALEQYADQLR
Ga0318554_1073491013300031765SoilMSLRGNSIEQELTLPDGRIALLHIGIAHDGYIPEKEEETVVLELRIDGHVAASINTVLDPDQDDEANELAREVIEALGTGHIPPTAAALEQYADQLR
Ga0318566_1054605923300031779SoilMSLRGNSIEQELTLPDGRIALLHIGIAHDGYIPEKEEETVVLELRIDGHVAASINTVLDPDQDDEANELAREVIEALGTG
Ga0308175_10078520623300031938SoilMSLRGSSIEQDLTLPDGRTAELRIGMAHDSYLPEREEETVILELRIDGHVAATVYTVLDPEQDEEATELAREVIEALGSGHIAPTASALEQYADRLR
Ga0308176_1241047013300031996SoilAEDRACTGRFRSALQEESTPVSLRDRSIEQELTLPDGRSVELRIGMAHDSYIPEREEETVVLELRIGGHVAASLNTVLDPEQEEEANELAREVIAALASGRIPPTAGALEQYADRLR
Ga0318524_1046857523300032067SoilIRAMSLRGNSIEQELTLPDGRIALLHIGIAHDGYIPEKEEETVVLELRIDGHVAASINTVLDPDQDDEANELAREVIEALGTGHIPPTAAALEQYADQLR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.