Metagenome / Metatranscriptome Family F086637

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086637
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	86 residues
Representative Sequence	MGAVAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDVGRAHDERV
Number of Associated Samples	92
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.80 %
% of genes near scaffold ends (potentially truncated)	30.91 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (35.455 % of family members)
Environment Ontology (ENVO)	Unclassified (45.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (42.727 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.96% β-sheet: 0.00% Coil/Unstructured: 62.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF02678	Pirin	22.73
PF07635	PSCyt1	4.55
PF09360	zf-CDGSH	3.64
PF00034	Cytochrom_C	3.64
PF08240	ADH_N	0.91
PF13360	PQQ_2	0.91
PF01757	Acyl_transf_3	0.91
PF16317	Glyco_hydro_99	0.91
PF07394	DUF1501	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	22.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.18 %
Unclassified	root	N/A	11.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.18 %
Unclassified	root	N/A	11.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.18 %
Unclassified	root	N/A	11.82 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	76.36 %
Unclassified	root	N/A	11.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	74.55 %
Unclassified	root	N/A	11.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	24.55 %
Unclassified	root	N/A	11.82 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	8.18 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	7.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	24.55 %
Unclassified	root	N/A	11.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.18 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	7.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	24.55 %
Unclassified	root	N/A	11.82 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	8.18 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	6.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000736\|JGI12547J11936_1094757	Not Available	542	Open in IMG/M
3300000756\|JGI12421J11937_10107533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	750	Open in IMG/M
3300001282\|B570J14230_10145468	Not Available	680	Open in IMG/M
3300002447\|JGI24768J34885_10314042	Not Available	526	Open in IMG/M
3300003394\|JGI25907J50239_1116990	Not Available	518	Open in IMG/M
3300003431\|JGI25913J50563_1072160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
3300004765\|Ga0007745_1382304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	749	Open in IMG/M
3300004768\|Ga0007762_1455441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	723	Open in IMG/M
3300004784\|Ga0007744_1308660	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	653	Open in IMG/M
3300004790\|Ga0007758_10041079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1132	Open in IMG/M
3300005415\|Ga0007743_1305828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	812	Open in IMG/M
3300007546\|Ga0102874_1226949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300007547\|Ga0102875_1272138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	516	Open in IMG/M
3300007549\|Ga0102879_1100520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	900	Open in IMG/M
3300007550\|Ga0102880_1199499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	522	Open in IMG/M
3300007551\|Ga0102881_1239921	Not Available	502	Open in IMG/M
3300007555\|Ga0102817_1084152	Not Available	697	Open in IMG/M
3300007561\|Ga0102914_1056626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1230	Open in IMG/M
3300007562\|Ga0102915_1038877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1573	Open in IMG/M
3300007562\|Ga0102915_1093975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	984	Open in IMG/M
3300007590\|Ga0102917_1034786	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1763	Open in IMG/M
3300007593\|Ga0102918_1011104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	2322	Open in IMG/M
3300007597\|Ga0102919_1127491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	801	Open in IMG/M
3300007597\|Ga0102919_1298659	Not Available	502	Open in IMG/M
3300007617\|Ga0102897_1145176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	722	Open in IMG/M
3300007620\|Ga0102871_1222492	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
3300007621\|Ga0102872_1112135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	729	Open in IMG/M
3300007625\|Ga0102870_1084177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	932	Open in IMG/M
3300007627\|Ga0102869_1055120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1107	Open in IMG/M
3300007630\|Ga0102903_1068055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	992	Open in IMG/M
3300007634\|Ga0102901_1033279	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1495	Open in IMG/M
3300007639\|Ga0102865_1079606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	978	Open in IMG/M
3300007642\|Ga0102876_1056551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1089	Open in IMG/M
3300007644\|Ga0102902_1063311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1107	Open in IMG/M
3300007644\|Ga0102902_1135507	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	732	Open in IMG/M
3300007653\|Ga0102868_1048910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	926	Open in IMG/M
3300007661\|Ga0102866_1076689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	823	Open in IMG/M
3300007706\|Ga0102899_1181186	Not Available	529	Open in IMG/M
3300007708\|Ga0102859_1095113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	855	Open in IMG/M
3300007708\|Ga0102859_1225681	Not Available	559	Open in IMG/M
3300007716\|Ga0102867_1060556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	999	Open in IMG/M
3300007862\|Ga0105737_1055156	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	967	Open in IMG/M
3300007972\|Ga0105745_1080285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300007992\|Ga0105748_10093299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1199	Open in IMG/M
3300007992\|Ga0105748_10112673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1095	Open in IMG/M
3300008052\|Ga0102893_1039023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1450	Open in IMG/M
3300008114\|Ga0114347_1004122	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	11119	Open in IMG/M
3300008950\|Ga0102891_1134250	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	736	Open in IMG/M
3300008996\|Ga0102831_1244416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	592	Open in IMG/M
3300009026\|Ga0102829_1132449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	791	Open in IMG/M
3300009057\|Ga0102892_1049164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	794	Open in IMG/M
3300009080\|Ga0102815_10686701	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	578	Open in IMG/M
3300009086\|Ga0102812_10870681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	501	Open in IMG/M
3300009152\|Ga0114980_10051620	All Organisms → cellular organisms → Bacteria	2492	Open in IMG/M
3300009152\|Ga0114980_10121023	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300009152\|Ga0114980_10347737	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	855	Open in IMG/M
3300009152\|Ga0114980_10602109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300009155\|Ga0114968_10657397	Not Available	551	Open in IMG/M
3300009158\|Ga0114977_10018397	All Organisms → cellular organisms → Bacteria	4392	Open in IMG/M
3300009158\|Ga0114977_10189291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1211	Open in IMG/M
3300009158\|Ga0114977_10304590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	907	Open in IMG/M
3300009158\|Ga0114977_10769476	Not Available	508	Open in IMG/M
3300009159\|Ga0114978_10041786	All Organisms → cellular organisms → Bacteria → PVC group	3212	Open in IMG/M
3300009159\|Ga0114978_10207573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1235	Open in IMG/M
3300009161\|Ga0114966_10046511	All Organisms → cellular organisms → Bacteria	3102	Open in IMG/M
3300009163\|Ga0114970_10114301	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300009164\|Ga0114975_10021034	All Organisms → cellular organisms → Bacteria	3958	Open in IMG/M
3300009183\|Ga0114974_10027129	All Organisms → cellular organisms → Bacteria	3991	Open in IMG/M
3300009183\|Ga0114974_10128153	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300009183\|Ga0114974_10752968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300009419\|Ga0114982_1276448	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	525	Open in IMG/M
3300010160\|Ga0114967_10054288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2510	Open in IMG/M
3300010312\|Ga0102883_1074300	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	995	Open in IMG/M
3300010885\|Ga0133913_12773175	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300010965\|Ga0138308_112629	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	4900	Open in IMG/M
3300011009\|Ga0129318_10100379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	826	Open in IMG/M
3300012006\|Ga0119955_1000649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	18635	Open in IMG/M
3300012663\|Ga0157203_1008399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1785	Open in IMG/M
3300012665\|Ga0157210_1005058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	2723	Open in IMG/M
3300012754\|Ga0138278_1123088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	761	Open in IMG/M
3300012763\|Ga0138289_1222076	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1041	Open in IMG/M
3300013372\|Ga0177922_10179751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	629	Open in IMG/M
3300021069\|Ga0194062_1036861	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300021963\|Ga0222712_10582494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	649	Open in IMG/M
3300024571\|Ga0256302_1089991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	722	Open in IMG/M
3300026454\|Ga0256319_1066056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	713	Open in IMG/M
3300027142\|Ga0255065_1050462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	743	Open in IMG/M
3300027223\|Ga0208169_1083837	Not Available	547	Open in IMG/M
3300027329\|Ga0255109_1074764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	722	Open in IMG/M
3300027746\|Ga0209597_1148490	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1004	Open in IMG/M
3300027759\|Ga0209296_1321568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	607	Open in IMG/M
3300027785\|Ga0209246_10156150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	896	Open in IMG/M
3300027963\|Ga0209400_1205222	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300033992\|Ga0334992_0021606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3978	Open in IMG/M
3300033992\|Ga0334992_0157320	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1164	Open in IMG/M
3300033994\|Ga0334996_0246783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	920	Open in IMG/M
3300034019\|Ga0334998_0309228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	936	Open in IMG/M
3300034021\|Ga0335004_0116836	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1763	Open in IMG/M
3300034022\|Ga0335005_0049614	All Organisms → cellular organisms → Bacteria → PVC group	2831	Open in IMG/M
3300034022\|Ga0335005_0058201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2590	Open in IMG/M
3300034102\|Ga0335029_0473501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	734	Open in IMG/M
3300034105\|Ga0335035_0650381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	549	Open in IMG/M
3300034110\|Ga0335055_0106060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1283	Open in IMG/M
3300034116\|Ga0335068_0060903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2185	Open in IMG/M
3300034116\|Ga0335068_0323433	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	760	Open in IMG/M
3300034118\|Ga0335053_0222971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1225	Open in IMG/M
3300034167\|Ga0335017_0017088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	4150	Open in IMG/M
3300034200\|Ga0335065_0043714	All Organisms → cellular organisms → Bacteria	3128	Open in IMG/M
3300034355\|Ga0335039_0194206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1124	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.09%
Terrestrial	Environmental → Terrestrial	0.91%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	58.18%
Marine	Environmental → Aquatic → Marine	40.91%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.91%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	40.91%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	35.45%
Lentic	Environmental → Aquatic → Freshwater → Lentic	11.82%
Coastal	Environmental → Aquatic → Marine → Coastal	4.55%
River	Environmental → Aquatic → Freshwater → River	3.64%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	40.91%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	35.45%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	8.18%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	3.64%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.82%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	35.45%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	21.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.55%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.27%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	3.64%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	3.64%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.82%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.82%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.91%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.91%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.91%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.91%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.91%
Lake Chemocline	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Chemocline	0.91%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.91%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.91%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003431	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN	Environmental	Open in IMG/M
3300004765	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004768	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004784	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004790	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005415	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental	Open in IMG/M
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007561	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007621	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3	Environmental	Open in IMG/M
3300007625	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02	Environmental	Open in IMG/M
3300007627	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-02	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007642	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007653	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3	Environmental	Open in IMG/M
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental	Open in IMG/M
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental	Open in IMG/M
3300007862	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2um	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008114	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NA	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009057	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-3	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010312	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-02	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300010965	Microbial communities from Lake Cadagno chemocline, Switzerland. Combined Assembly of Gp0156211, Gp0156621	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300012754	Freshwater microbial communities from Lake Montjoie, Canada - M_130821_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012763	Freshwater microbial communities from Lake Simoncouche, Canada - S_140108_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300021069	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L224-25m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300024571	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026454	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027142	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h	Environmental	Open in IMG/M
3300027223	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3 (SPAdes)	Environmental	Open in IMG/M
3300027329	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Miss_RepB_8h	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034110	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12547J11936_10947571	3300000736	Freshwater And Sediment	VGTVAERTLLGMLAGAEVDGAIGLSLIRHGREGGTLVGAIAERLVLAVSTRAPVIGLTSFDEDGNRGLLRDMGGGHEVRVSSLEYG
JGI12421J11937_101075332	3300000756	Freshwater And Sediment	VRTVAEGTFLGVLAGAEINRAVGFSLVRDRSEGRTLVGAIAERLGLRMAAGTPVVGLAGFDEDRKGGLLRDVRCGHGWIIVYRATYARSNKSAST
JGI12421J11937_101672271	3300000756	Freshwater And Sediment	MGAVAQGTLLRVLAGTEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDR
B570J14230_101454682	3300001282	Freshwater	MGAXAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAXAPVVGLAGFDEDGDRGLLRXXGRAHDERV*
JGI24768J34885_103140421	3300002447	Freshwater And Sediment	VGTVAERTLLGMLAGAEVDGAIGLSLIRHGREGGTLVGAIAERLVLAVSTRAPVIGLTSFDEDGNRGLLRDMGGGHEVRVSSLE
JGI25907J50239_11169902	3300003394	Freshwater Lake	MGAXAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDVGRAHDERV*
JGI25913J50563_10721602	3300003431	Freshwater Lake	RLMKGLTSEGLMGAVAKRALLRMLTGTEIDGAIGLGLIRHGRKRGTLMGTVAKRLRLAVSTRAPVIGLTGFDEDRDRGLLRDMGGGHGKKIQRADDRYGMKDRR*
Ga0007745_13823041	3300004765	Freshwater Lake	VYGWKNLEGLVGAIAEGTLFGVLAGAEVDRAVGFSRIRHRGEGRTLVGAIAERLGLRMAAGAPVVGLTSLDEDGERGLLRDM
Ga0007762_14554412	3300004768	Freshwater Lake	VYGWKNLEGLVGAIAEGTLFGVLAGAEVDRAVGFSRIRHRGEGRTLVGAIAERLGLRMAAGAPVVGLTSLDEDG
Ga0007744_13086602	3300004784	Freshwater Lake	LKGLSSEGLVRAIAERTLLGVFAGAEIDRAVGLGLVRHGREGGTFMAAVAERLVLAVSTRAPVVGLAGFNEDRERRLLRDMGGGHGARVSSLEYGV*
Ga0007758_100410792	3300004790	Freshwater Lake	VRAIAERTLLGVFAGAEIDRAVGLGLVRHGREGGTFMAAVAEGLVLAVSTRAPVIGLAGFNEDRERRLLRDMGGGHEVRVSSLEYGV*
Ga0007743_13058282	3300005415	Freshwater Lake	MKGLTSEGLVGAVAERTLLGMLAGAEVDCAIGLSLIRHGREGGTLVGAIAERLVLAVSTRAPVIGLTGFDEDRDRGLLRDMGGGHGKK
Ga0102874_12269491	3300007546	Estuarine	MMAGAEVDCAVGLSLIGHGREGGAFVAAVAEGLVLTVSTRAPVISLTGFNEDRERRLLGDMGGGHGARVSSLEY
Ga0102875_12721381	3300007547	Estuarine	MRAVAEGTLLGVLAGAEVDGSVSLSLVRHWREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0102879_11005202	3300007549	Estuarine	MGAVAQGALLGVLAGAEVDGAGGFGLKRYRREGGTLMGTIAERLVLAVSARAPVVSLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0102880_11994992	3300007550	Estuarine	AERTLLGVLTGAEVDRAVSLSLVGHGREGRTFMAAVAEGLVLAVSTRAPVIGLAGFNEDGDWGLLRDMGGGHDEKMTEGR*
Ga0102881_12399212	3300007551	Estuarine	MGAVAQGTLLRVLAGAEVNGAVRLGLIRHRREGVTFVGAIAERLVLAVAARAPVVGLTGFDEDGYRRLLSDVGG*
Ga0102817_10841522	3300007555	Estuarine	MGAITQRALLGVLAGAEVDRAGGFGLKRYRREGGTLVGAIAERLVLAVSARAPVVGLTGFDEDGDRGLLGDVRGAHDSRVWSLEYGV*
Ga0102914_10566263	3300007561	Estuarine	MGAITQRALLGLLAGAEVDRAGGFGLKRYRREGGTLVGAIAERLVLAVSARAPVVGLAGFDEDGDRGLLGDVRGAHDSRVWSMEYRGM*
Ga0102915_10388772	3300007562	Estuarine	MGAITQRALLGVLAGAEVDRAGGFGLKRYRREGGTLVGAIAERLVLAVSARAPVVGLAGFDEDGDRGLLGDVRGAHDSRVWSLEYGV*
Ga0102915_10939752	3300007562	Estuarine	VGAVAERTLLGVLAGAEIDRAVGLSLIRHGREGGTLVGAVAERLRLAVSTRAPVVGLTGFNEDRERRLLRDMGGGHDEKMTEGR*
Ga0102917_10347863	3300007590	Estuarine	MGAITQRALLGLLAGAEVDRAGGFGLKRYRREGGTLVGAIAERLVLAVSARAPVVGLAGFDEDGDRGLLGDVRGAHDSRVWSLEYGV*
Ga0102918_10111043	3300007593	Estuarine	MGAITQRALLGVLAGAEVDRAGGFGLERYRREGGTLVGAIAERLVLAVSARAPVVGLAGFDEDGDRGLLGDVRGAHDSRVWSLEYGV*
Ga0102919_11274912	3300007597	Estuarine	MGAITQRALLGVLAGAEVDRAGGFGLERYRREGGTLVGAIAERLILAVSARAPVIGLAGFDEDGDRGLLGDVRGAHDSRVWSLEYGV*
Ga0102919_12986592	3300007597	Estuarine	MGAITQRALLGLLAGAEVDRAGGFGLVWNGHESGTLVGAIAERLVLAVSARAPVVSLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0102897_11451762	3300007617	Estuarine	MGAVAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTFVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDAGRAHDERV*
Ga0102871_12224922	3300007620	Estuarine	EIDRAVGLGLIRHGRESGTLVGAIAERLVLAVSARAPVVGLTGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0102872_11121351	3300007621	Estuarine	MGAVAQGALLGVLAGAEVDRAGSFGLKRYRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0102870_10841772	3300007625	Estuarine	MRAVAEGTLLGVLAGAEIDRAVGLGLIRHGRESGTLVGAIAERLVLAVSARAPVVSLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0102869_10551203	3300007627	Estuarine	MGAVAQGALLGVLAGAEVDGSVSLSLVRHWREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0102903_10680552	3300007630	Estuarine	MRAVAEGTLLGVLAGAEVDGSVSLSLVRQWREGGTLVGAIAERLILAVSARAPVIGLAGFDEDGDRGLLGDVRGAHDSRVWSLEYGV*
Ga0102901_10332792	3300007634	Estuarine	MGAITQRALLGVLAGAEVDRAGGFGLKRYRREGGTLVGAIAERLVLAVSARAPVVGLAGFDEDGNRGLLGDVRGAHDSRVWSLEYGV*
Ga0102865_10796061	3300007639	Estuarine	MKGLTSEGLVGAVAERTLLGMLAGAEVDCAIGLSLIRHGREGGTLVGAIAERLVLAVSTRAPVVGLAGFDEDGDCGLLRDMGGGHDEKMTEGR*
Ga0102876_10565512	3300007642	Estuarine	LKGLTSEGLVGAVAERTLLGVLAGAEIDRAVGLSLIRDRREGGTLVGAIAERLVLAVSTRAPVVGLAGFNEDGDWGLLRDMGGGHDEKMTEGR*
Ga0102902_10633111	3300007644	Estuarine	AERTVFGVLTGAEVDRAVSLSLVGHGREGRTFMAAVAEGLVLAVSTRAPVVGLTGFNEDRERRLLGDMGGGHDDKMTEGR*
Ga0102902_11355071	3300007644	Estuarine	MGAVAQGALLGVLAGAEVDGAGGFGLKRYRREGGTLMGTIAERLVLAVSARAPVVSLAGFDEDGNRGLLGGVRGGHGKEIQDERWQIKDG*
Ga0102868_10489102	3300007653	Estuarine	MGAITQRALLGLLAGAEVDRAGGFGLKRYRREGGTLVGAIAERLILAVSARAPVIGLAGFDENWDRGLLGDVRGAHDS
Ga0102866_10766892	3300007661	Estuarine	MGAITQRALLGVLAGAEVDRAGGFGLKRYRREGGTLVGAVAERLVLAVSARAPVVGLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0102899_11811862	3300007706	Estuarine	MGAITQRALLGVLAGAEVDRAGGFGLERYRREGGTLVGAIAERLVLAVSARAPVVGLAGFDEDGDRGLLGDVRGAHDSRVWSIEYRV*
Ga0102859_10951132	3300007708	Estuarine	MGAITQRALLGLLAGAEVDRAGGFGLKRYRREGGTLVGAIAERLVLAVSARAPEVGLAGFDEDGDRGLLRNVGGAHDERI*
Ga0102859_12256811	3300007708	Estuarine	LKGLTSEGLVGAVTKRALLGMLTGAEIDGSVAFSLIRDGDEGGTLVGAVAEGLRLAVSARAPIVGLAGFNEDGNRGLLRDVGGGHDEKMTEGR*
Ga0102867_10605562	3300007716	Estuarine	LMRAVAEGTLLGVLAGAEVDGSVSLSLVRHWREGGTLVGAIAERLVLAVSARAQVVSLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0105737_10551562	3300007862	Estuary Water	LKGLTSEGLVGAVTKRALLGMLTGAEIDGAVAFSLIRDGNEGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0105745_10802852	3300007972	Estuary Water	LKGLTSEGLVGAVTKRALLGMLTGAEIDGSVAFSLIRDGDEGGTLVGAVAEGLRLAVSARAPIIGLAGFNEDGNRGLLRDMGGGHGVRVSSLEYEYRGLL*
Ga0105748_100932992	3300007992	Estuary Water	LKGLTSEGLVGAVTKRALLGMLTGAEIDGSVAFSLIRDGDEGGTLVGAVAEGLRLAVSARAPIVGLAGFNEDGNRGLLRDVGGGHGRRVWSIEYGV*
Ga0105748_101126732	3300007992	Estuary Water	MGSVAKSALLGVLAGAEVDRAVGLGLVGHRRETRTLMGAIAEGLVLAVAARAPVVGLTGFDEDGYRRLLRDVGG*
Ga0102893_10390232	3300008052	Estuarine	MGAITQRALLGVLAGAEVDRAGGFGLKRYRREGGTLVGAIAERLVLAVSARAPVVGLASFDEDGNRGLLGDVRGAHDSRVWSMEYRGM*
Ga0114347_10041225	3300008114	Freshwater, Plankton	MGAITEGAFLGVLAGAEVDRAGGFGLVWNGHESGTLVGAIAERLVLAVSARAAVVGLAGFDEDGNRGLLGDVGSGHEEKMTEDRWKIKDG*
Ga0102891_11342502	3300008950	Estuarine	LKGLTSERLKGAVAQGALLGVLAGAEVDGSVSLSLVRHWREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0102831_12444161	3300008996	Estuarine	MGAVAQGALLGVLAGAEVDGAGGFGLKRYRREGGTLMGTIAERLVLAVSARAPVVSLAGFDEDGDRGLLGDVRGGHGKEIQDERW
Ga0102829_11324492	3300009026	Estuarine	MGAITQRALLGVLAGAEVDRAGGFGLERYRREGGTLMGAVAERLVLAVSAGTPVIGLTGFDEDGDRGLLRDMGGGHDEKMTEGR*
Ga0102892_10491642	3300009057	Estuarine	MGAITQRALLGVLAGAEVDRAGGFGLKRYRREGGTLVGAIAERLVLAVSARAPVVGLTGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG*
Ga0102815_106867011	3300009080	Estuarine	MRAVAEGTLLGVLAGAEVDGSVSLSLVRHWREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDAGRAHDERV*
Ga0102812_108706812	3300009086	Estuarine	MGAVAQGALLGVLAGAEVDGAGGFGLKRYRREGGTLMGTIAERLVLAVSARAPVVSLAGFDEDGDRGLLGDVRGGHG
Ga0114980_100516204	3300009152	Freshwater Lake	LKGLTSEGLVRAVTEGTLLRMLTGAEIDRAVGFGLVRHGREGGTFVAAVAERLRLAVSTRAPVVGLTGFDEDRDRGLLRDMGGGHERKMTEGR*
Ga0114980_101210232	3300009152	Freshwater Lake	LKGLTSEGLVGAIAEGALLGVLTGAEIDGTIRFGLIRDRRERGILVGAIAEGLRLAVSTRAPVVGLTGFDEDRERRLLGDMGGGHDEKMTEGR*
Ga0114980_103477371	3300009152	Freshwater Lake	GMKGLTSEGLMGAVTERTLLGVLTGTEIDGTISFSLIRDRREGGTLVGAIAEGLRLAVSARAPIVGLTSFDEDGDGRLLRDVGGGHERRVWSLEYRV*
Ga0114980_106021092	3300009152	Freshwater Lake	LKGLTSEGLVGAIAEGTLLGVLTGAEIDGTIRFGLIRDRRERGTLVGAVAERLRLAVSARAPVVGLTGFDEDGERRLLGDMGGGHDEKMTEGR*
Ga0114968_106573972	3300009155	Freshwater Lake	MKGLTSESLVGAIAKGALLGMLTGAEIDRTIGFSLIRDRRERGTLVGAIAERLRLAVATRAPVVGLTGFDEDGERRLLGNMGGGHGVRVSSLEYGV*
Ga0114977_100183975	3300009158	Freshwater Lake	LKGLTSEGLVRAVTEGTLLGVLTGAEIDCSVGLGLVRHRREGGTFVAAVAERLRLAVSTRAPVVGLTGFDEDRDRGLLRDMGGGHERKMTEGR*
Ga0114977_101892911	3300009158	Freshwater Lake	VGAIAEGALLGVLTGAEIDGTIRFGLIRDRRERGTLVGAIAEGLRLAVSTRAPVVGLAGFNEDGERRLLGDMGGGHDEKMTEGR*
Ga0114977_103045901	3300009158	Freshwater Lake	VGAVAEGAFLGVLTGAEIDGAVGFSLIRDRRESGPLVGTIAERLGFAVSTRAPVVGLTGFDEDRERRLLGDMGGGHDEKMTEGR*
Ga0114977_107694761	3300009158	Freshwater Lake	EGALLGVLTGAEIDGTIRFGLIRDRRESRPLVGAVAEGLVLTVSTRAPVIGLAGFDEDGNRGLLRDVGGGHDEKMTEGR*
Ga0114978_100417864	3300009159	Freshwater Lake	LLGVLTGAEIDCSVGLGLVRHRREGGTFVAAVAERLRLAVSTRAPVVGLTGFDEDRDGRLLRDMGGGHGEEIQDER*
Ga0114978_102075731	3300009159	Freshwater Lake	TSEGLVGAIAEGALLGVLTGAEIDGTIRFGLIRDRRERGTLVGAIAEGLRLAVSTRAPVVGLAGFNEDGERRLLGDMGGGHDEKMTEGR*
Ga0114966_100465114	3300009161	Freshwater Lake	MKGLTSESLVGAIAKGALLGMLTGAEIDRSIGFSLIRDRRERGTLVGAIAERLRLAVATRAPVVGLTGFDEDGERRLLGNMGGGHGVRVSSLEYGV*
Ga0114970_101143013	3300009163	Freshwater Lake	GLKGLTSEGLVGAIAEGTLLGVLTGAEIDGTIRFGLIRDRRERGTLVGAVAERLRLAVSARAPVVGLTGFDEDGERRLLGNMGGGHGVRVSSLEDGV*
Ga0114975_100210342	3300009164	Freshwater Lake	VGAVAEGAFLGVLTGAEIDGTIRFGLIRDRRERGTLVGAIAEGLRLAVSTRAPVVGLAGFNEDGERRLLGDMGGGHDEKMTEGR*
Ga0114974_100271294	3300009183	Freshwater Lake	MKGLTSEGLVGAVAQSALLGVLTGAEIDCSVGLGLVRHRREGGTFVAAVAERLRLAVSTRAPVVGLTGFDEDRDRGLLRDMGGGHERKMTEGR*
Ga0114974_101281532	3300009183	Freshwater Lake	MQGLEGLVGAVAEGALLGVLAGAEVDGAVGFGLIRDRREGGTLVGAIAERLGLGMTAGTPVVGLAGFNEYRNRRLLRDMRCGHG*
Ga0114974_107529682	3300009183	Freshwater Lake	LKGLTSEGLVRAVTEGTLLRMLTGAEIDRAVGFGLVRHGREGGTFVAAVAEGLVLTVSTRAPVVGLASFDEDRDGRLLRDMGGGHERKMTEGR*
Ga0114982_12764481	3300009419	Deep Subsurface	GTLLGVLAGAEVDRAVRLGLIRHGRESGTLVGAIAERLVLAMSTGAPVVGLAGFDEDGDRGLLGDVRGGHGERV*
Ga0114967_100542882	3300010160	Freshwater Lake	VGAIAEGALLGVLTGAEIDGTIRFGLIRDRRERGTLVGAVAERLRLAVSARAPVVGLTGFDEDGERRLLGDMGGGHDEKMTEGR*
Ga0102883_10743001	3300010312	Estuarine	MGAVAQGALLGVLAGAEVDGAGGFGLKRYRREGGTLMGTIAERLVLAVSARAPVVSLAGFDEDGDRGLLGDVRGGH
Ga0133913_127731753	3300010885	Freshwater Lake	MQGLEGLVGAVAEGALLGVLAGAEVDGAVGFGLIRDRREGGTLVGAIAERLGLGMTAGTPVVGLAGFNEYRNRRLLRDMRC
Ga0138308_1126294	3300010965	Lake Chemocline	MLAGAEVYGAIGFSLIKDRRERGALVGAVAERLRLAVATRAPVIGLTGFDEDGDRGLLRDMGGGHERKMTEGR*
Ga0129318_101003792	3300011009	Freshwater To Marine Saline Gradient	MKGLTSEGLVGAVAERTLLGMLAGAEVDCAIGLSLIRHGREGGTLVGAIAERLVLAVAARAPVVGLAGFNEDGDGGLLRDVGGGH
Ga0119955_100064914	3300012006	Freshwater	MKGLTSESLVGAIAKGALLGMLTGTEIDRTIGFSLIRDRRERGTLVGAIAERLRLAVATRAPVVGLTGFDEDGERRLLRDVGGGHGRRVWSLEYRV*
Ga0157203_10083992	3300012663	Freshwater	MKGLTSEGLVGAVAERTLLGMLAGAEVDCAIGLSLIRHGREGGTLVGAIAERLVLAVSTRAPVIGLTSFDEDGNRGLLRDMGGGHGKKIQDG*
Ga0157210_10050584	3300012665	Freshwater	MKGLTSEGLVGAVAERTLLGMLAGAEVDCAIGLSLIRHGREGGTLVGAIAERLVLAVSTRAPVIGLTGFDEDGNRGLLRDMGGGHGKKIQDG*
Ga0138278_11230881	3300012754	Freshwater Lake	MKGLTSESLVGTIAKGALLGMLTGAEIDRTIGFSLIRDRRERGTLVGAVAERLRLAVSARAPVVGLTGFDEDGERRLL
Ga0138289_12220762	3300012763	Freshwater Lake	MQGLEGLVGAVAEGAFLGVLTGAEIDGAVGFSLIRDRRESGPLVGTIAERLGFAVSTRAPVVGLTGFDEDRERRLLGDMGGGHDEKMTEGR*
Ga0177922_101797512	3300013372	Freshwater	LGVLTGAEIDCSVGLGLVRHRREGGTFVAAVAKRLRLAVSTRAPVIGLTGFDEDRDRGLLRDMGGGHGKKIQRADDRYGMKDRR*
Ga0194062_10368613	3300021069	Anoxic Zone Freshwater	MKGLTSESLVGAIAKGALLGMLTGAEIDRTIGFSLIRDRRERGTLVGAIAERLRLAVATRAPVVGLTGFDEDGERRLLGNMGGGHGVRVSSLEYGV
Ga0222712_105824942	3300021963	Estuarine Water	KGLTSERLMGAVAQGALLGVLAGAEVDGAGGFGLKRYRREGGTLMGTIAERLVLAVSARAPVVSLAGFDEDGNRGLLGDVRGGHGKEIQDERWKIKDG
Ga0256302_10899911	3300024571	Freshwater	MRAVAEGTLLGVLTGAEVNGAVRLGLIRHGRESGPLVGAITERLVLAVSARAPVVSLAGFDEDGDWGL
Ga0256319_10660561	3300026454	Freshwater	MKGRTSEPLVGTIAKGALLRVLAGAEVDHASGFGLVRHRREGAALVGTVAEGLGLAVSAGTPVVGLTGF
Ga0255065_10504621	3300027142	Freshwater	VGSVAQGTLLGVLAGAEVNGAVRLGLIRHGRESGPLVGAITERLVLAVSARAPVVSLAGFDEDGDWGLLRDVGGAH
Ga0208169_10838371	3300027223	Estuarine	MGAVAQGALLGVLAGAEVDGAGGFGLKRYRREGGTLMGTIAERLVLAVSARAPVVSLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG
Ga0255109_10747642	3300027329	Freshwater	MGAVAQGTLLRVLAGTEVNGAVRLGLIRHRRESGTLVGAIAERLVLAVSARAPVVSLAGFDEDGDWGLLRDVGGAHSERV
Ga0209597_11484901	3300027746	Freshwater Lake	MQGSEGLVGTVAEGTLLGVLAGAEVDRAVGFSLIRNRGEGRTLVGAIAERLGLGMTAGTPVVGLAGFNEYRNRRLLRDMRCGHG
Ga0209296_13215681	3300027759	Freshwater Lake	SEGLVRAVTEGTLLRMLTGAEIDRAVGFGLVRHGREGGTFVAAVAEGLVLTVSTRAPVVGLASFDEDRDGRLLRDMGGGHERKMTEGR
Ga0209246_101561501	3300027785	Freshwater Lake	VGAVAERTLLGMLAGAEVDCAIGLSLIRHGREGGTLVGAIAERLVLAVSTRAPVIGLTGFDEDGNRGLLRDMGGGHGKKIQDG
Ga0209400_12052222	3300027963	Freshwater Lake	MKGLTSESLVGAIAKGALLGMLTGAEIDRTIGFSLIRDRRERGTLVGAIAERLRLAVATRAPVVGLTGFDEDGERRLLGNMGGGHGVRV
Ga0334992_0021606_1824_2105	3300033992	Freshwater	MKGLTSEGLMRAVAERTLLGVLAGAEIDRAVRLGLVRHGRESRTLMGAVAEGLVLAVSAGTPVVGLTGFDEDRDRRLLRDVGGGHDEKMTEGR
Ga0334992_0157320_615_896	3300033992	Freshwater	MKGLNSERLMGAITQSALLGVLAGAEIDRAVRLGLVRHRSKSRAFVGAVAEGLVLAVAAGAPVVGLAGFNEDGDGRLLRDMGGGHDEKMTEGR
Ga0334996_0246783_201_470	3300033994	Freshwater	MKGLTSEGLMRAIAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDAGRAHDERV
Ga0334998_0309228_35_277	3300034019	Freshwater	MRAVAEGTLLGVLAGAEVDGSVSLSLVRHWREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRNVGGAHDERV
Ga0335004_0116836_10_219	3300034021	Freshwater	VLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDAGRAHDERV
Ga0335005_0049614_2472_2762	3300034022	Freshwater	MKGLTSEGLVGAVAKRTLLGVLAGTEVDRAVGLSLIRDRREGGTFVGAVAERLAFAVSTRAPVVGLTGFNKDRERRLLGDMGGGHGRRVWSLEYRV
Ga0335005_0058201_60_278	3300034022	Freshwater	MLAGAEVDCAIGLSLIRHGREGGTLVGAIAERLVLAVSTRAPVIGLTGFDEDWNRGLLRDMGGGHGKKIQDG
Ga0335029_0473501_8_250	3300034102	Freshwater	MGAVAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDVGRAHDERV
Ga0335035_0650381_250_528	3300034105	Freshwater	MKGLTSEGLVGAVAERTLLGMLAGAEVDCAIGLSLIRHGREGGTLVGAIAERLVLAVSTRAPVIGLTGFDEDWNRGLLRDMGGGHGKKIQDG
Ga0335055_0106060_316_588	3300034110	Freshwater	MRAVAEGTLLGVLAGAEVDGAVSLSLVRHWREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLGDVRGGHGKEIQDERWKIKDG
Ga0335068_0060903_405_674	3300034116	Freshwater	MKGLTSEGLMGAIAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSARAPVVGLAGFDEDGDRGLLRNVGGAHDERV
Ga0335068_0323433_229_471	3300034116	Freshwater	MGAIAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDVGRAHDERV
Ga0335053_0222971_273_542	3300034118	Freshwater	MKGLTSEGLMGAIAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDAGRAHDERV
Ga0335017_0017088_390_671	3300034167	Freshwater	MKGLTSEGLVGAVAERTLLGMLAGAEVDCAIGLSLIRHGREGGTLVGAIAERLVLAVSTRAPVIGLTGFDEDWNRGLLRDMGGGHDEKMTEGR
Ga0335065_0043714_2860_3102	3300034200	Freshwater	MRAIAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDAGRAHDERV
Ga0335039_0194206_695_964	3300034355	Freshwater	MKGLTSEGLMRAIAQGTLLRVLAGAEVNGAVRLGLIRHRREGGTLVGAIAERLVLAVSAGAPVVGLAGFDEDGDRGLLRDVGRAHDERV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086637

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences