Metagenome / Metatranscriptome Family F086483

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086483
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	114 residues
Representative Sequence	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRAAAPQPRPGCEPEPDGANHRRCADVWLYSMLRCELAEGHDGPHMATASGYRRPARWVRDDRGLAHALPEPAD
Number of Associated Samples	55
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	52.34 %
% of genes near scaffold ends (potentially truncated)	40.00 %
% of genes from short scaffolds (< 2000 bps)	76.36 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.818 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (39.091 % of family members)
Environment Ontology (ENVO)	Unclassified (46.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.727 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.49% β-sheet: 27.01% Coil/Unstructured: 63.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF08323	Glyco_transf_5	13.64
PF00534	Glycos_transf_1	4.55
PF02604	PhdYeFM_antitox	1.82
PF00196	GerE	1.82
PF04107	GCS2	1.82
PF13361	UvrD_C	1.82
PF00296	Bac_luciferase	1.82
PF07311	Dodecin	1.82
PF01434	Peptidase_M41	0.91
PF07005	SBD_N	0.91
PF01569	PAP2	0.91
PF00491	Arginase	0.91
PF00589	Phage_integrase	0.91
PF01381	HTH_3	0.91
PF03065	Glyco_hydro_57	0.91
PF13683	rve_3	0.91
PF11829	DUF3349	0.91
PF08044	DUF1707	0.91
PF16561	AMPK1_CBM	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0297	Glycogen synthase	Carbohydrate transport and metabolism [G]	13.64
COG0438	Glycosyltransferase involved in cell wall bisynthesis	Cell wall/membrane/envelope biogenesis [M]	13.64
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.82
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.82
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	1.82
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.82
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.91
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG3395	D-threonate/D-erythronate kinase OtnK and related C4-acid sugar kinases, YgbK/DUF1537 family	Carbohydrate transport and metabolism [G]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
All Organisms	root	All Organisms	38.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
cellular organisms	root	All Organisms → cellular organisms	38.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14.55 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.00 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.91 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.91 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.64 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.91 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.91 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	0.91 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.91 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	0.91 %
unclassified Kutzneria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria	0.91 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.82 %
Kutzneria sp. 744	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria → Kutzneria sp. 744	0.91 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	0.91 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004620\|Ga0068957_1443454	Not Available	533	Open in IMG/M
3300009520\|Ga0116214_1184930	Not Available	781	Open in IMG/M
3300009521\|Ga0116222_1308198	Not Available	684	Open in IMG/M
3300009524\|Ga0116225_1538784	Not Available	518	Open in IMG/M
3300009525\|Ga0116220_10387740	Not Available	623	Open in IMG/M
3300009672\|Ga0116215_1040143	Not Available	2140	Open in IMG/M
3300009672\|Ga0116215_1057153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	1766	Open in IMG/M
3300009683\|Ga0116224_10135165	Not Available	1189	Open in IMG/M
3300009700\|Ga0116217_10027466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4385	Open in IMG/M
3300009700\|Ga0116217_10199400	Not Available	1316	Open in IMG/M
3300009700\|Ga0116217_10571706	Not Available	706	Open in IMG/M
3300009764\|Ga0116134_1100299	Not Available	1049	Open in IMG/M
3300009824\|Ga0116219_10301206	Not Available	904	Open in IMG/M
3300009824\|Ga0116219_10329081	Not Available	858	Open in IMG/M
3300009824\|Ga0116219_10764655	Not Available	527	Open in IMG/M
3300009839\|Ga0116223_10342717	Not Available	886	Open in IMG/M
3300009839\|Ga0116223_10583050	Not Available	646	Open in IMG/M
3300010379\|Ga0136449_100343863	All Organisms → cellular organisms → Bacteria	2686	Open in IMG/M
3300010379\|Ga0136449_101788128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	920	Open in IMG/M
3300010379\|Ga0136449_102330013	Not Available	775	Open in IMG/M
3300012350\|Ga0137372_10053786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3543	Open in IMG/M
3300014164\|Ga0181532_10335897	Not Available	849	Open in IMG/M
3300014200\|Ga0181526_10058162	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300014200\|Ga0181526_10354056	Not Available	933	Open in IMG/M
3300014493\|Ga0182016_10202894	Not Available	1279	Open in IMG/M
3300016750\|Ga0181505_10434267	Not Available	724	Open in IMG/M
3300017821\|Ga0187812_1117422	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300017939\|Ga0187775_10226189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria → Kutzneria sp. 744	707	Open in IMG/M
3300017942\|Ga0187808_10009385	All Organisms → cellular organisms → Bacteria	3791	Open in IMG/M
3300017943\|Ga0187819_10060770	Not Available	2244	Open in IMG/M
3300017943\|Ga0187819_10614287	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300017955\|Ga0187817_10941847	Not Available	553	Open in IMG/M
3300017959\|Ga0187779_10348427	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300017961\|Ga0187778_10093973	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300017966\|Ga0187776_10650164	Not Available	740	Open in IMG/M
3300017966\|Ga0187776_11378201	Not Available	536	Open in IMG/M
3300017973\|Ga0187780_10642745	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300018001\|Ga0187815_10253298	Not Available	745	Open in IMG/M
3300018002\|Ga0187868_1300413	Not Available	530	Open in IMG/M
3300018013\|Ga0187873_1042680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2024	Open in IMG/M
3300018033\|Ga0187867_10041597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2801	Open in IMG/M
3300018034\|Ga0187863_10010990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5861	Open in IMG/M
3300018058\|Ga0187766_10002060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	11877	Open in IMG/M
3300018058\|Ga0187766_10394344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300018085\|Ga0187772_10365511	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300018085\|Ga0187772_11362742	Not Available	526	Open in IMG/M
3300018086\|Ga0187769_10199932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1479	Open in IMG/M
3300018086\|Ga0187769_10240208	Not Available	1346	Open in IMG/M
3300018086\|Ga0187769_10350740	Not Available	1106	Open in IMG/M
3300018086\|Ga0187769_10613746	Not Available	822	Open in IMG/M
3300018086\|Ga0187769_11063440	Not Available	612	Open in IMG/M
3300018088\|Ga0187771_10853982	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300018089\|Ga0187774_10184779	Not Available	1127	Open in IMG/M
3300018090\|Ga0187770_10257982	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300029939\|Ga0311328_10357671	Not Available	1062	Open in IMG/M
3300030707\|Ga0310038_10099507	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300030707\|Ga0310038_10256895	Not Available	806	Open in IMG/M
3300032160\|Ga0311301_10114401	All Organisms → cellular organisms → Bacteria	5143	Open in IMG/M
3300032160\|Ga0311301_10194229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3502	Open in IMG/M
3300032160\|Ga0311301_10348268	Not Available	2320	Open in IMG/M
3300032160\|Ga0311301_11298095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	920	Open in IMG/M
3300032770\|Ga0335085_11447214	Not Available	718	Open in IMG/M
3300032770\|Ga0335085_12082458	Not Available	574	Open in IMG/M
3300032782\|Ga0335082_11077109	Not Available	669	Open in IMG/M
3300032783\|Ga0335079_10876401	Not Available	924	Open in IMG/M
3300032783\|Ga0335079_11116070	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300032783\|Ga0335079_11193504	Not Available	766	Open in IMG/M
3300032805\|Ga0335078_10085302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4592	Open in IMG/M
3300032805\|Ga0335078_10155094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3234	Open in IMG/M
3300032805\|Ga0335078_10682795	Not Available	1276	Open in IMG/M
3300032805\|Ga0335078_11030571	Not Available	971	Open in IMG/M
3300032805\|Ga0335078_11693715	Not Available	694	Open in IMG/M
3300032805\|Ga0335078_11929192	Not Available	636	Open in IMG/M
3300032805\|Ga0335078_12095297	Not Available	601	Open in IMG/M
3300032828\|Ga0335080_10307896	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300032828\|Ga0335080_10327170	Not Available	1658	Open in IMG/M
3300032828\|Ga0335080_10344518	Not Available	1609	Open in IMG/M
3300032828\|Ga0335080_10584660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1176	Open in IMG/M
3300032828\|Ga0335080_10651459	Not Available	1102	Open in IMG/M
3300032828\|Ga0335080_10967821	Not Available	869	Open in IMG/M
3300032828\|Ga0335080_10969379	Not Available	868	Open in IMG/M
3300032828\|Ga0335080_11999032	Not Available	561	Open in IMG/M
3300032892\|Ga0335081_10002368	All Organisms → cellular organisms → Bacteria	29643	Open in IMG/M
3300032892\|Ga0335081_10035223	All Organisms → cellular organisms → Bacteria	8004	Open in IMG/M
3300032892\|Ga0335081_10309548	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300032892\|Ga0335081_10608421	Not Available	1346	Open in IMG/M
3300032892\|Ga0335081_11035945	Not Available	952	Open in IMG/M
3300032892\|Ga0335081_11784007	Not Available	666	Open in IMG/M
3300032892\|Ga0335081_12694738	Not Available	507	Open in IMG/M
3300032954\|Ga0335083_10106709	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300032954\|Ga0335083_10297326	Not Available	1420	Open in IMG/M
3300032955\|Ga0335076_10063050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	3660	Open in IMG/M
3300032955\|Ga0335076_10547831	Not Available	1039	Open in IMG/M
3300032955\|Ga0335076_11605460	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300033004\|Ga0335084_10824922	Not Available	941	Open in IMG/M
3300033158\|Ga0335077_10099491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3413	Open in IMG/M
3300033158\|Ga0335077_10230476	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300033158\|Ga0335077_10636939	Not Available	1107	Open in IMG/M
3300033158\|Ga0335077_10875860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	907	Open in IMG/M
3300033158\|Ga0335077_10923293	Not Available	877	Open in IMG/M
3300033158\|Ga0335077_11522338	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300033158\|Ga0335077_11822603	Not Available	571	Open in IMG/M
3300033158\|Ga0335077_12121573	Not Available	518	Open in IMG/M
3300033158\|Ga0335077_12141913	Not Available	515	Open in IMG/M
3300033433\|Ga0326726_10172560	Not Available	1983	Open in IMG/M
3300033502\|Ga0326731_1111139	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300034090\|Ga0326723_0539761	Not Available	537	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.45%
Aquatic	Environmental → Aquatic	14.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.82%
Freshwater	Environmental → Aquatic → Freshwater	14.55%
Peat	Environmental → Terrestrial → Peat	3.64%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	56.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	55.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.18%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	39.09%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	24.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	16.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.91%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004620	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068957_14434541	3300004620	Peatlands Soil	VVEAGSCEQALHLAAGQASGLREPAGSGPQPDDADHRRCADVWVHSLLRCELEEGHDRPHMAAARGYWRPARWVRDDRGLAHVLPEPDTGPP*
Ga0116214_11849301	3300009520	Peatlands Soil	MLFNVTVREHTCTGRFYNDVVEAGSCEEALDLAAGQATAPQPLPGSTPQPDDANRRRCADAWVYSLLHCELAEGHDPPHMAVARGYRRPAQWVRDDRGLAYASPKPASPP*
Ga0116222_13081981	3300009521	Peatlands Soil	MPLFYVSVREHTYTGRFYHDIVEAGSFEDALQLAAGRATAPQPPPAARPQPDGADGRRCADVWVYSLLHCELAEGHDPPHMAVAPGYRRPVRWVRDDRGLAHALPEPASRPVPRQAPP
Ga0116225_15387841	3300009524	Peatlands Soil	MLFNVTVREHTYTGRFYNDVVEAGSCEEALNLAAGQATAPQPLPGSTPQPDDANHRRCADAWVYSLLRCDLTEGHDPPHMAVARGYRRPAQWVRDD
Ga0116220_103877401	3300009525	Peatlands Soil	VPDRVLPMPLFHITLREHTYTGRFYNDVVEAGSFEEALRLAAGQATASRPPPGLRPQPDGANRRRCADVWIHSLLHCALAKGHDPPHMAVARGYWRPVRWVRDDRGLASDTGAARPA*
Ga0116215_10401433	3300009672	Peatlands Soil	MPLFYVTVREHTYTGRFYHDIVEAGSSGDALQLAAGRAAAPQPPPAARPQPDGADGRRCADVWVYSLLHCELAEGHDPPHMAAARGYRRPARWVRDHRGLAQALPEPASRPSAGLD*
Ga0116215_10571533	3300009672	Peatlands Soil	VTEHTPTGRFYTDVVQAESCEQALQLAAERASVPHPPPASTPQPGAAARPRCADVWVYSLLHCELEEGHDPPHMALAPGYRRPVRWVRDEHGLAHAVPEQPTVGRANSLT*
Ga0116215_11413982	3300009672	Peatlands Soil	MPLFNVTVREHAYTGRFYDDIVTAESCEEALQLAAERATAPRGSPGSEPQPDATNRRRCADVWVYSLLHCELADGHDPPHMAVATGYRRPMRWVRDDRGLAHAFPEPATGPPVI
Ga0116224_101351652	3300009683	Peatlands Soil	MPLFYVSVREHTYTGRFYHDIVEAGSFEDALQLAAGRATAPQPPPAARPQPDGADGRRCADVWVYSLLHCELAEGHDPPHMAAARGYWRPARWVRDHRGLAQALPEPASRPSAGLD*
Ga0116217_100274662	3300009700	Peatlands Soil	MAREHTYTGRFYDDVVEAGSCEQALQLAAGRASGLRVPPGSEPQPDDADRRRCADVWVYSVLRCELAEGHDPPHMAAARGYWRPARWVRDDRGLAHVLPEPDTGPQ*
Ga0116217_101994002	3300009700	Peatlands Soil	MLFNVTVREHTYTGRFYNDVVEAGSCEEALHLAAGQATAPQPLPGSTPQPDDANRRRCADAWVYSLLHCELAEGHDPPHMAVARGYRRPAQWVRDDRGLAYASPKPASPP*
Ga0116217_105717061	3300009700	Peatlands Soil	GDVPPMPLFYVSVREHTYTGRFYHDIVEAGSFEDALQLAAGRATAPQPPPAARPQPDGADGRRCADVWVYSLLHCELAEGHDPPHMAAARGYWRPARWVRDHRGLAQALPEPASRPSAGLD*
Ga0116134_11002992	3300009764	Peatland	MLLFNVTVREHTYTGRFHNDVVEAGSCEEALHLAAGQATAPQPPPGSTPQPDDANRRRCADAWVYSLLRCELTEGHDPPHMAIARGYRRPARWVRDDRGLAHASPKPASPA*
Ga0116219_103012061	3300009824	Peatlands Soil	GRRAGHRIPTAPGSGQRSFNVTLREHTYAGRFYDDVVEAGSFEEALRLAAGQATASRPPPGLRPQPDGANRRRCADVWIHSLLHCALAKGHDPPHMAVARGYWRPVRWVRDDRGLASDTGAARPA*
Ga0116219_103290811	3300009824	Peatlands Soil	TGRFYNDVVEAGSCEEALDLAAGQATAPQPPPGSTPQPDDANRRRCADAWVYSLLHCELAEGHDPPHMAVARGYRRPAQWVRDDRGLAYASPKPASPP*
Ga0116219_107646551	3300009824	Peatlands Soil	MPPRRAAHFPRSKCPNKVPPVPLFSAIVREHACTGQFYHDVVEAGSCEQALHLAAGQASGLREPAGSGPQPDDADHRRCADVWVHSLLRCELEEGHDRPHMAAARGYWRPARWVR
Ga0116223_103427171	3300009839	Peatlands Soil	MLFNVTVREHTYTGRFYNDVVEAGSCEEALDLAAGQATAPQPPPGSTPQPDDANRRRCADAWVYSLLHCELAEGHDPPHMAVARGYRRPAQWVRDDRGLAYASPKPASPP*
Ga0116223_105830502	3300009839	Peatlands Soil	LFNVTVREHAYTGRFYDDIVTAESCEEALQLAAERATAPRGSPGSEPQPDATNRRRCADVWVYSLLHCELADGHDPPHMAVATGYRRPMRWVRDDRGLAH
Ga0136449_1003438632	3300010379	Peatlands Soil	MPLFHITLREHTYTGRFYNDVVEAGSFEEALRLAAGQATASRPPPGLRPQPDGANRRRCADVWIHSLLHCALAKGHDPPHMAVARGYWRPVRWVRDDRGLASDTGAARPA*
Ga0136449_1017881281	3300010379	Peatlands Soil	PPGSRQRSFNVTLREHTYAGRFYNDVVEAGSFEEALRLAAGQATGPQPPPGFRPQPDGANRRRCADVWIHSLLHCELAEGHDPPHMAVARGYWRPVSWVRDDRGLACNTGAARPA*
Ga0136449_1023300132	3300010379	Peatlands Soil	MLTLFLGGSAHEKRRPMPLFNVTVREHTCTGRSYTDVVQAESWEEALQLAAERATASRPLPAFQPRPDAADCPRCADIWVHSLLHCGLEEGHDPPHIAVPPGYWRPVRWVRDDRDLARPLPEPATSQP*
Ga0137372_100537863	3300012350	Vadose Zone Soil	MPLFHVTVREHTYTGRFYHDVVEAGSFEDALQLAAGRAAAPEPPPAAGPQPDGADRRRCADVWVCSLLRCELAEGHDPPHMAVARGYRRPARWVRDDRGLARALPEPGCRPSARRD*
Ga0181532_103358971	3300014164	Bog	MPLFHITLREHTYTGRFYNDVVEAGSFEEALQLAAGQATGPEPPPGFRPQPDGANRRRCADVWIYSLLHCELAEGHYPPHMAVARGYWRPVRWVRDDRGLACNTGAARPA*
Ga0181526_100581622	3300014200	Bog	MLLFNVTVREHTCTGRFHNDVVEAGSCEEALHLAAGQATAPQPPPGSTPQPDDANRRRCADAWVYSLLRCELTEGHDPPHMAIARGYRRPARWVRDDRGLAHASP
Ga0181526_103540561	3300014200	Bog	MPLFDIMLREHTYTGRFYNDVVEAGSFGEALQLAAGQATGPEPPPGFRPQPDGANRRRCADVWIYSLLHCELAEGHYPPHMAVARGYWRPVRWVRDDRGLACNTGAARPA*
Ga0182016_102028942	3300014493	Bog	MPLFHITLREHTYTGRFYNDVVKAGSFEEALQLAAGQATGPEPPPGFRPQPDGANRRRCADVWIYSLLHCELAEGHYPPHMAVARGYWRPVRWVRDDRGLACNTGAARPA*
Ga0181505_104342671	3300016750	Peatland	VVEAGSFEEALQLAAGQAMGPEPPPGFRPQPDGANRRRCADVWIYSLLHCELAEGHDPPHVAVARGYWRPVRWVRDDRGLACDTGAARLA
Ga0187812_11174222	3300017821	Freshwater Sediment	MPLFHVTVREHTYTGRFYHDVVEAGSFEEALHLAAGRATAPQPPPGARPRPDGSDRRRCADVWVYSLLHCELADGHDPPHMAVAPGYRRPVRWVR
Ga0187775_102261891	3300017939	Tropical Peatland	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRAAAPQPRPGSEPEPDGANHRRCADVWLYSLLHCELAEGHDGPHMATASGYRRPARWVRDDRGLAHALPEPGPAASLD
Ga0187808_100093853	3300017942	Freshwater Sediment	MPLFYVTVREHSYTGRFYHEIVDAGSFEDALQLAAGRATAPQPPPAARPQPDGADRRRCADVWLYSLLHCELAEGHDPPHIAAARGYWRPARWVRDDRGLAQALPEPASRPSARLD
Ga0187819_100607701	3300017943	Freshwater Sediment	MPLFYVTVREHTYTGRFYHEIVEAGSFEDALQLAAGRAAAPQPPPAARPQPDGADRRRCADVWLYSLLHCELAEGHDPPHIAAARGYWRPARWVRDDRGLAQALPEPASRPSARLD
Ga0187819_106142871	3300017943	Freshwater Sediment	SVTVTEHTDATSTGRFHDDFVAAGSCEQALHLAAGQASGLRAPAGSGPAPDDADHRRCADVWVHSLLRCELEEGHDPPHLAAAPGYWRPARWVRDDRGLAHALPEPGTGPGTRI
Ga0187817_109418471	3300017955	Freshwater Sediment	GPRTFPRSQCPNKVPPVPLFSAIVREHAYTGQFHHDVVEAGSCEQALHLAAGQASGLRAPAGYGPAPDDVDHRRCADVWVHSLLRCELEEGHDPPHLAAAPGYWRPARWVRDDRGLAHALPEPGTGPGSRI
Ga0187779_103484272	3300017959	Tropical Peatland	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRATAPQPPPRSEPEPDDANHRRCADVWLYSLLRCELAEGHDGPHMATAPGHRRPARWVRDDRGLAHALPEPEPTARLD
Ga0187778_100939731	3300017961	Tropical Peatland	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRATAPQPPPRSEPEPDDANHRRCADVWLYSLLRCELAEGHDGPHMATAPGYRRPARWVRDDRGLAHALPEPEPTARLD
Ga0187776_106501642	3300017966	Tropical Peatland	MPLFHVMVREHTYTGRFYHHVVEAGSLEEALQLAAGRSAAPQPPPAAGPRPGGADGRRCADVWVYSLLHCELTEGHDPPHMAAAPGYRRAVRWVRDDRGLAQALPE
Ga0187776_113782011	3300017966	Tropical Peatland	MQYYVTVREHAYTGRFHNDVVQAGSFEEALQLAAERAAGLRPPPGPAPRPDGANHRRCAGVWVYPMLHCELAEGHDPPHIAAAPGYWRAARWVRDDRGLAHALPEPA
Ga0187780_106427451	3300017973	Tropical Peatland	NKVPPVPLFSVMVREHACTGQFYQDVVEAGSCEQALHLAAGQASGRRASAGPGPQPGDAGHRRCADAWGCSLLRCALAEGHDRPHMAAAPGYWRPARWVRDDRGLAHAVPEPDTGTRI
Ga0187815_102532981	3300018001	Freshwater Sediment	MPLFYVTVREHTYTGRFYHDIVEAGSSGDALQLAAGRAAAPQPPPAARPQPDGADRRRCADVWLYSLLHCELAEGHDPPHIAAARGYWRPARWVRDDRGLAQALPEPASRPSARLD
Ga0187868_13004131	3300018002	Peatland	PARRSRGWAETSSKPVPNKVLPMPLFHITLREHTYTGRFYNDVVKAGSFEEALQLAAGQATGPEPPPGFRPQPDGANRRRCADVWIYSLLHCELAEGHYPPHMAVARGYWRPVRWVRDDRGLACNTGAARPA
Ga0187873_10426803	3300018013	Peatland	MPLFHITLREHTYTGRFYNDVVEAGSFEEALQLAAGQATGPEPPPGFRPQPDGANRRRCADVWIYSLLHCELAEGHYPPHMAVARGYWRPVRWVRDDRGLACNTGAARPA
Ga0187867_100415971	3300018033	Peatland	MPLFDIMLREHTYTGRFYNDVVEAGSFGEALQLAAGQATGPEPPPGFRPQPDGASRRRCADVWIYSLLHCELAEGHEPPHMAVARGYWRPVRWVRDDRGFARNTGAARPA
Ga0187863_100109905	3300018034	Peatland	MPLFHITLREHTYTGRFYNDVVKAGSFEEALQLAAGQATGPEPPPGFRPQPDGANRRRCADVWIYSLLHCELAEGHYPPHMAVARGYWRPVRWVRDDRGLACNTGAARPA
Ga0187883_101429241	3300018037	Peatland	MPLFNVAVREHTYTGQFYSDVVQAGSPEEALQVAAAQAAAPEPPPGPTPRTEAAGRPGCADVWVYTLLHCDLEAGHDPPHMAVAHGYRRPVRWVRDDLGIAHLVPDPATV
Ga0187766_100020601	3300018058	Tropical Peatland	YTGRFYHDVVEAESFEDALQLAAGQATAPQPPPRSEPEPDRANHRRCADIWVYSLLRCELAEGHDPPHMATAPGHRRPARWVRDDRGLAHALSEPAGPRSAWIGEGRQRPASFRHLPPAV
Ga0187766_103943442	3300018058	Tropical Peatland	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRATAPQPPPGFEPEPDGANNPGCADVWLDSLLRCELAEGHDGPHMATASGYRRPARRVRDDRDLAHALPEPEPTARLD
Ga0187772_103655112	3300018085	Tropical Peatland	MQFYVTVREHTYTGRFYNDVVQAESFEEALQLAAERAAGLRPPPDPAPRPDGANRRRCADVWVYPTLHCELAEGHDPPHIAAAPGYWRPARWVRDDRGLAHALPEPATGPS
Ga0187772_113627421	3300018085	Tropical Peatland	EALQLAAERAAGLRPPPGSTPRPDGANHRRCADVWVYPMLHCELAEGHDPPHKAAAPGYWRAARWVRDDRGLAHALPEPATGPS
Ga0187769_101999322	3300018086	Tropical Peatland	MPLFYVTVREHTYTGRFYHDVVEAGSFEEALQLAAGRADAPQPPSARPQPDGADRQRCADVWVYSLLHCELIEGHDPPHMAAAPGHRRAARWVRDDRGLAHAWPEPASRPSAISPATQLPSALERESSQVPLAGEGGA
Ga0187769_102402081	3300018086	Tropical Peatland	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRATAPQPPPRSEPEPDRANHRRCADIWVYSLLRCELAEGHDRPHMVTASGYRRPARWVRDDRGLAHALPEPAD
Ga0187769_103507402	3300018086	Tropical Peatland	MQFYVTVREHTYTGRFYNDVVRAESFEEALQLAAERAAGLWPPPGSAPRPDAANHRRCADVWVYPMLHCELAEGHDPPHIAAAPGYWRAARWVRDDRGLAHALPEPATGPS
Ga0187769_106137461	3300018086	Tropical Peatland	VPLFSVIVREHTYTGQFYHDVVEAGSCEQALHLAAGHASGPRAPAGPGPLPDDADHRRCADVWVHCLLRCELEQGHDRPHMAAAPGYWRPARWVRDDRGLAHAVPGPGTGPGTRT
Ga0187769_110634402	3300018086	Tropical Peatland	MSSFHITAREHTYTGRFYTDIVEAESFEQALQLAAERATAPQPPPGSKPRPDGADRRRCSDVFVYRLLHCELAEGHDPPHMAVAPGYWRPARWVRDERGLAHALPEPATGNRE
Ga0187771_108539821	3300018088	Tropical Peatland	VPLFSVIVREHAYTGQFYHDVVEAGSCEQALHLVATRATARQPPPGSGPQPDDADHRRCAGVWVRSLLRCELAEGHDRPHMAAAAGYRRPARWVRDDRGLAHAVPEPDTGTRI
Ga0187774_101847792	3300018089	Tropical Peatland	MLLFHVTVREHTHTGRFYHDVVEAESFEDALQLAAGRASAPQPRPGSEPEPDDANHRRCADVWLYSLLRCELAEGHDGPHMATASGYRRPARWVRDDRGLAHALPEPAD
Ga0187770_102579822	3300018090	Tropical Peatland	MPLFSVMVREHTYTGQFYHDVVEAGSCEQALHLAAEHASGLRPPAGPGPLPDDADHPRCADVWVHSLLRCELEEGHDRPHMAAAPGYRRPARWVRDDRGLAHAVPGPGTGPGTRT
Ga0311328_103576712	3300029939	Bog	GSFEEALQLAAGQATGPEPPPGFRPQPDGANRRRCADVWIYSLLHCELAEGHYPPHMAVARGYWRPVRWVRDDRGLACNTGAARPA
Ga0310037_102582442	3300030494	Peatlands Soil	MARFNVTVREHSYTGRFYSDVVQAESCEEALEAAAARAAAPQPSLDPTLQADAAGRPRCADVWVYSLLHCELVAGHDPPHMAVAHGYRRLASWVRDD
Ga0310038_100995072	3300030707	Peatlands Soil	MAREHTYTGRFYDDVVEAGSCEQALQLAAGRASGLRVPPGSEPQPDDADRRRCADVWVYSVLRCELAEGHDPPHMAAARGYWRPARWVRDDRGLAHVLPEPDTGPQ
Ga0310038_102568951	3300030707	Peatlands Soil	MLFNVTVREHTYTGRFYNDVVEAGSCEEALDLAAGQATAPQPLPGSTPQPDDANRRRCADAWVYSLLHCELAEGHDPPHMAVARGYRRPAQWVRDDRGLAYASPKPASPP
Ga0311301_101144013	3300032160	Peatlands Soil	MPPRRAAHFPRSKCPNKVPPVPLFSAIVREHACTGQFYHDVVEAGSCEQALHLAAGQASGLREPAGSGPQPDDADHRRCADVWVRSLLRCELEEGHDPPHLAAAAGYWRPARWVRDDRGLAHALPGPGTGPGTRI
Ga0311301_101942291	3300032160	Peatlands Soil	MPLFYVSVREHTYTGRFYHDIVEAGSFEDALQLAAGRATAPQPPPAARPQPDGADGRRCADVWVYSLLHCELAEGHDPPHMAAARGYRRPARWVRDHRGLAQALPEPASRPSAGLD
Ga0311301_103482682	3300032160	Peatlands Soil	VTEHTPTGRFYTDVVQAESCEQALQLAAERASVPHPPPASTPQPGAAARPRCADVWVYSLLHCELEEGHDPPHMALAPGYRRPVRWVRDEHGLAHAVPEQPTVGRANSLT
Ga0311301_112980951	3300032160	Peatlands Soil	PPGSRQRSFNVTLREHTYAGRFYNDVVEAGSFEEALRLAAGQATGPQPPPGFRPQPDGANRRRCADVWIHSLLHCELAEGHDPPHMAVARGYWRPVSWVRDDRGLACNTGAARPA
Ga0335085_114472141	3300032770	Soil	MPLFSVIVREHAYTGQFYHDVVEAGSCEQALHLAAARATARQPPPGSGPQPDDADHRRCADAWVRSLLRCELAEGHDPPYTAAAPGYWRPARWMRDDRGLAHAVPEPGTGPGTRS
Ga0335085_120824581	3300032770	Soil	MLFHVTVREHTYTGRFYNDVVQAGSFEEALQLAAERAGLRPLPGSAPRPDGSNRRRCADVWVYPILHCELAEGHDPPHIAAAPGYWRAARWVRDDRGLAHALPEPATGPS
Ga0335082_110771091	3300032782	Soil	MRPCRAPLSPRGKCPNKVPPVPLLSVVVREHAYTGQFYHDVVEAGSCEQALQLAAGHASRLRAPTGSGPQPDDADHRRCADVWVHSLVRCELEEGHEPPHMAAAPGYRRPVSWVRDERGLAKHCLSQTPA
Ga0335079_108764011	3300032783	Soil	MPSFYVTVTEHTYTGRSYHDVVEAGSPGEAMQLAAGRAAVPQPPPGAEPEPHDAERRRCADVWVYSLLRCELTEGHDPPHMATAPGYWRPVRWVRDNRGLAQALPEPDTGPPSAWIEDGRQRPASLGHLPPAIP
Ga0335079_111160701	3300032783	Soil	MPLFHVTVREHTYTGRFYHDVVQAGSLEEALQLAAGRAAAPQPPAARPQPDGTDGRRCADVWVCSLLRCELAEGHHPPHMATARGYWRPARWVRDDRGLAHALPEPDTGPPPAWIEEGRQRPASLRHLPPAVP
Ga0335079_111935042	3300032783	Soil	MPSFYVTVREHTYTGRSYHDVVEAGSPEEALRLAAGRATAPQPLPGSGPEPDGADRRRCGDVWVCSLLRCELTEGHDPPHMATAHGYWRPARWVRDDRGLAHALPDPASRPSAISPATQLPSAPEGESSPIPRTGQGGA
Ga0335078_100853021	3300032805	Soil	MQYYVTVREHTYTGRFYNDVVQAESFEEALQLAAERTAGLRPPPGSAPRPDGANHRRCADVWVYPMLHCELAEGHDPPHTAAAPGYWRAARWVRDDRGLAHALPEPATGPS
Ga0335078_101550942	3300032805	Soil	MPSFYVTVTEHTYTGRSYHDVVEAGSPGEALQLAAGRAAVPQPPPGAGPEPHDAERRRCADVWVYSLLRCELTEGHDPPHMATAPGYWRPVRWVRDNRGLAQALPEPASRPAAIAPATQLPSAPEGESSRIPLTGQGGA
Ga0335078_106827952	3300032805	Soil	TYTGRFYHDVVEAGSLEEALQLAAGRAAAPQPPPAARPQPHDADRPRCADVWVYSLLCCELTEGHDPPHTATAPGYRHAVRWVRDDRGLAHALPEPDTGPAPAWIEEGR
Ga0335078_110305711	3300032805	Soil	FAGQFYSDVVEAGSGEEALQLAAGQATGLQPPPAPEPQPDDARCADVWVYPLLHCELVEGHDLPHMAVARGYWRPVRWVRDVRGIARTTPEPATSPP
Ga0335078_116937151	3300032805	Soil	YHDVVEAGSPEEALRLAAGRAAVPQPLPGSEPEPDGADRRRCGDVWVCSLLRCELTEGHDPPHMATAHGYWRPARWVRDDRGLAHALPDPASRPSAISPATQLPSAPEGESSPIPRTGQGGA
Ga0335078_119291921	3300032805	Soil	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRAAAPQPRPGCEPEPDGANHRRCADVWLYSVLGCELAEGHDGPHMATASGYRRPARWVRDDRGLAHALPEPAD
Ga0335078_120952971	3300032805	Soil	LQLAAAQATAPQPPGYEQRSFSVTVAEHAYGTGAGRFHDDVVEARSCEQALQLVAAQATALQPPGSGPQPDGTDRRRCADVWVHSLLRCELAEGHDPPHIAAARGYWRPARWVRDDRGLAHALPEPDTGPP
Ga0335080_103078962	3300032828	Soil	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRATAPQPPPGSEPEPDGANHWRCADVWVYSLLGCELAAGHDGPHMGTAPGYRRPARWVRDDRGLAHALPEPAVPTARLD
Ga0335080_103271701	3300032828	Soil	MQFYVTVREHTYTGRFYNDVVQAESFEEALQLAAERTAGLRPPPGSAPRPDGANHRRCADVWVYPMLHCELAEGHDPPHTAAAPGYWRAARWVRDDRGLAHALPEPATGPS
Ga0335080_103445184	3300032828	Soil	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRATAPHPPPGSEPEPDGANHRRCADVWVYSLLGCELAEGHDGPHMGTAPGHRRPARWVRDDRGLAHPLPEPAGPTPRLD
Ga0335080_105846602	3300032828	Soil	MPSFYVTVTEHTYTGRSYHDVVEAGSPGEALQLAAGRAAVPQPPPGAGPEPHDAERRRCADVWVYSLLRCELTEGHDPPHMATAPGYWRPVRWVRDNRGLAQALPEPDTGPPSAWIEDGRQRPASLGHLPPAIP
Ga0335080_106514592	3300032828	Soil	TGRSYHDVVEAGSPGEAMQLAAGRAAVPQPPPGAEPEPHDAERRRCADVWVYSLLRCELTEGHDPPHMATAPGYWRPVRWVRDNRGLAQALPEPASRPAAIAPATQLPSAPEGESSRIPLTGQGGA
Ga0335080_109678212	3300032828	Soil	RLLPMPLFHVTVREHSYTGRFYHDVVEAESFEDALQLAAGRAAAPQPRPGCEPEPDGANHRRCADVWLYSMLHCELAEGHDGPHMATASGYRRPARWVRDDRGLAHALPEPAD
Ga0335080_109693791	3300032828	Soil	GQAITPNLPPGSKQLSFNVAVQEHTFTGRFYSDVVEAGSGQEALRLAAGQAAGLQPLPGSRPQPDHARCADVWVYPLLHCELAEGHDLPHMAIAPGYWRPARWVRDCRGIAHTAPEPATGPP
Ga0335080_119990322	3300032828	Soil	MPLFNVTVREHTCTGRSYTDVVQAESWEEALQLAAERATASRPLPSFQPRPDAADCPRCADIWVDSLLHCGLEEGHDPPHIAVPPGYWRPVRWVRDDRDLAHPLPEPATG
Ga0335081_1000236835	3300032892	Soil	MPSFYVTVTEHTYTGRSYHDVVEAGSPGEAMQLAAGRAAVPQPPPGAEPEPHDAERRRCADVWVYSLLRCELTEGHDPPHMATAPGYWRPVRWVRDNRGLAQALPEPASRPAAIAPATQLPSAPEGESSRIPLTGQGGA
Ga0335081_100352235	3300032892	Soil	MPSFYVTVREHTYTGRFYHDVVEAGSLEEALQLAAGRAAAPQPPPAARPQPHDADRPRCADVWVYSLLCCELTEGHDPPHTATAPGYRHAVRWVRDDRGLAHALPEPDTGPAPAWIEEGR
Ga0335081_103095482	3300032892	Soil	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRATAPQPPPGSEPEPDGANHWRCADVWVYSLLGCELAAGHDGPHMGTAPGYRRPARWVRDDRGLAYALPEPAGPTARLD
Ga0335081_106084212	3300032892	Soil	MPSFYVTVREHTYTGRSYHDVVEAGSPEEALRLAAGRAAVPQPLPGSEPEPDGADRRRCGDVWVCSLLRCELTEGHDPPHMATAHGYWRPARWVRDDRGLAHALPDPASRPSAISPATQLPSAPEGESSPIPRTGQGGA
Ga0335081_110359451	3300032892	Soil	TFTGRFYSDVVEAGSGQEALRLAAGQAAGLQPLPGSRPQPDHARCADVWVYPLLHCELAEGHDLPHMAIAPGYWRPARWVRDCRGIAHTAPEPATGPP
Ga0335081_117840071	3300032892	Soil	MPLFYVTVTEHTYTGRFYHDVVEAGSPGEALRLAAGRAAAPQPPPAARPRPDDADRRRCGDVWVYSLLRCELAEGHDPPHMVTAPGYRRPVRWVRDDRGLAQALPEPDTGLAHALPEPDTGPPPARIEEGRQRPASLGHLPPAVP
Ga0335081_126947381	3300032892	Soil	MPLFHVTMKEHTYTGRFYHDVVEAESFEDALQLAAGRATAPHPPPGSEPEPDGANHRRCADVWVYSLLGCELAEGHDGPHMGTAPGHRRPARWVRDDRGLAHPLPEPAGPTPRLD
Ga0335083_101067091	3300032954	Soil	MLFHVTVREHTYTGRFYNDVVQAGSFEEALQLAAERAGLRPLPGSAPRPDGSNRRRCADVWVYPILHCELAEGHDPPHIAAAPGYWRPARWVRDKRGLAHAVPEPATSPS
Ga0335083_102973262	3300032954	Soil	SKQQPFNVTVRDHTFTGQFYSDVVEAGSGEEALQLAAGQATGLQPPPGPEPQPDDSRCADVWVYPLLHCELVEGHDLPHMAVARGYGRAVRWVRDVRGIARITPEPATSRP
Ga0335076_100630502	3300032955	Soil	MPLFHVTVREHTYTGRFYHDVVQAGSLEEALQPAAGRAAAPQPPAARPQPDGTDGRRCADVWVCSLLRCELAEGHHPPHMATARGYWRPARWVRDDRGLAHALPEPDTGPPPAWIEEGRQRPASLRHLPPAVP
Ga0335076_105478312	3300032955	Soil	MPSFYVTVREHTYTGRSYHDVVEAGSPEEALRLAAGRATAPQPLPGSEPEPDGADRRRCGDVWVCSLLRCELTEGHDPPHMATAHGYWRPARWVRDDRGLAHALPDPASRPSAISPATQLPSAPEGESSPIPRTGQGGA
Ga0335076_116054602	3300032955	Soil	MPLFDVTVTEHTYTGRFYHDVVEAGSPGEALRLAAGRAAAPQPPPAARPRPDDADRRRCGDVWVYSLLRCELAEGHDPPHMATAPGYRRPVRWVRDDRGLAQALPEPDTGLAH
Ga0335084_108249222	3300033004	Soil	MPLFHVTVREHSYTGRFYHDVVEAESFEDALQLAAGRATAPQPPPGSEPEPDGANHRRCADVWLDSLLGCELAEGHDGPHMGTARGYRRPARWVRDDRGLAHALSEPAD
Ga0335077_100994912	3300033158	Soil	VAEQAYGTGAGRFHDDVVEAGSCEHALRLAAARATAPQPSAGSGPQPDGADRRGCADVWVHSLLRCELEEGHDPPHMAAARGYWRPARWVRDDRGLAHALPEPGTGSR
Ga0335077_102304762	3300033158	Soil	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRAAAPQPRPGCEPEPDGANHRRCADVWLYSMLRCELAEGHDGPHMATASGYRRPARWVRDDRGLAHALPEPAD
Ga0335077_106369392	3300033158	Soil	MSAFHITAREHTYIGRFYTDIVEAESFEQALQLAAGRATAPQPPPGSKPRPDGADRRRCSDTFLYRLLHCELAEGHDPPHMAVAPGYWRPARWVRDERGLAHALPEPATGNREVEGREAQSEESPTS
Ga0335077_108758602	3300033158	Soil	EHTYTGRFYHDVVEAESFEDALQLAAGRATAPHPPPGSEPEPDGANHRRCADVWVYSLLGCELAEGHDGPHMGTAPGHRRPARWVRDDRGLAHPLPEPAGPTPRLD
Ga0335077_109232932	3300033158	Soil	MPLFHVTVREHTYTGRFYHDVVEAESFEDALQLAAGRATAPQPPPGSEPEPDGANHWRCADVWVYSLLGCELAAGHDGPHMGTAPGYRRPARWVRDDRGLAHALPEPAGPTARLD
Ga0335077_115223382	3300033158	Soil	MPSFYVTVTEHTYTGRSYHDVVEAGSPGEALQLAAGRAAVPQPPPGAGPEPHDAERRRCADVWVYSLLRCELTEGHDPPHMATAPGYWRPVRWVRDNRGLAQALPEP
Ga0335077_118226031	3300033158	Soil	MPLFHVTVREHTYTGRFYHDVVEAGSFEDALQLAAGRATAPQPPPGSEPEPDGANHRRCADVWVYPLLRCELAQGHDPPHMATARGYWRPARW
Ga0335077_121215731	3300033158	Soil	NDVVQAESFEEALQLAAERAAGLRPPPGSTPRPDGANRRRCADVWIYPTLHCELAEGHDPPHIAAAPGYWRPARWVRDDRGLAHALPEPATGPS
Ga0335077_121419131	3300033158	Soil	LAAERAAGLGPPPGSTPRPDGANHRRCADVWVYPMLHCELPEGHDPPHIAAAPGYWRAARWVRDDRGLAHALPEPATGPS
Ga0326726_101725602	3300033433	Peat Soil	LFHVTVREHTYTGRFYHEVVEAESFEDALQLAAGRATAPQPPPGSEPEPDGANHRRCADVWLDSLLRCELAEGHDEPHMGTARGYRRPARWVRDDRGLAHALPEPAGPPPALD
Ga0326731_11111392	3300033502	Peat Soil	MPLFHVTVREHTYTGRFYHEVVEAESFEDALQLAAGRATAPQPPPGSEPEPDGANHRRCADVWLDSLLRCELAEGHDEPHMGTARGYRRPARWVRDDRGLAHALPEPAGPPPALD
Ga0326723_0539761_1_318	3300034090	Peat Soil	HTYTGRFYHEVVEAESFEDALQLAAGRATAPQPPPGSEPEPDGANHRRCADVWLDSLLRCELAEGHDEPHMGTARGYRRPARWVRDDRGLAHALPEPAGPPPALD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086483

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences