Metagenome Family F086435

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086435
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	69 residues
Representative Sequence	MTRMGYPQSGLTALLDALERELLAAQADEVRDAWRESGRARNIACQEVRALLNEAIAASE
Number of Associated Samples	80
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.91 %
% of genes near scaffold ends (potentially truncated)	93.64 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.818 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (66.364 % of family members)
Environment Ontology (ENVO)	Unclassified (70.909 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (61.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.09% β-sheet: 0.00% Coil/Unstructured: 40.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01135	PCMT	10.00
PF04542	Sigma70_r2	7.27
PF00326	Peptidase_S9	1.82
PF01695	IstB_IS21	0.91
PF11994	DUF3489	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	10.00
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	10.00
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	10.00
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	10.00
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	7.27
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	7.27
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	7.27
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	7.27
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.82 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.82 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.82 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.91 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	79.09 %
Unclassified	root	N/A	18.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.55 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.18 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.64 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.18 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	3.64 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.18 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	3.64 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005439\|Ga0070711_101737337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300005471\|Ga0070698_100958032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300005602\|Ga0070762_10396055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	889	Open in IMG/M
3300005764\|Ga0066903_107432695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300005764\|Ga0066903_108519581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300010046\|Ga0126384_10669039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	917	Open in IMG/M
3300010048\|Ga0126373_11564117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300010048\|Ga0126373_13122065	Not Available	516	Open in IMG/M
3300010358\|Ga0126370_11649640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300010360\|Ga0126372_10321053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1373	Open in IMG/M
3300010361\|Ga0126378_12567462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300010376\|Ga0126381_102405498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300011269\|Ga0137392_11591777	Not Available	512	Open in IMG/M
3300012971\|Ga0126369_10912975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	964	Open in IMG/M
3300016294\|Ga0182041_10130536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1904	Open in IMG/M
3300016357\|Ga0182032_10567801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	940	Open in IMG/M
3300016357\|Ga0182032_11021782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300016371\|Ga0182034_10435251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1083	Open in IMG/M
3300016422\|Ga0182039_10186278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1643	Open in IMG/M
3300020581\|Ga0210399_10603036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	908	Open in IMG/M
3300020581\|Ga0210399_11106341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300021171\|Ga0210405_10064648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2886	Open in IMG/M
3300021181\|Ga0210388_10632818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	935	Open in IMG/M
3300021358\|Ga0213873_10213716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300021406\|Ga0210386_11256506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300021432\|Ga0210384_10643146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	951	Open in IMG/M
3300021432\|Ga0210384_11122618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300021432\|Ga0210384_11718483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300021478\|Ga0210402_10473032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1164	Open in IMG/M
3300021560\|Ga0126371_11295058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300025916\|Ga0207663_10996384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300027874\|Ga0209465_10192815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300031545\|Ga0318541_10708737	Not Available	562	Open in IMG/M
3300031546\|Ga0318538_10392832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300031573\|Ga0310915_11144681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300031668\|Ga0318542_10079616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1550	Open in IMG/M
3300031668\|Ga0318542_10542870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300031679\|Ga0318561_10094895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1560	Open in IMG/M
3300031679\|Ga0318561_10123096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1379	Open in IMG/M
3300031680\|Ga0318574_10752474	Not Available	571	Open in IMG/M
3300031681\|Ga0318572_10014311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3851	Open in IMG/M
3300031682\|Ga0318560_10240131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972	Open in IMG/M
3300031682\|Ga0318560_10270989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	913	Open in IMG/M
3300031723\|Ga0318493_10369804	Not Available	781	Open in IMG/M
3300031723\|Ga0318493_10760174	Not Available	545	Open in IMG/M
3300031724\|Ga0318500_10056262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1687	Open in IMG/M
3300031724\|Ga0318500_10168508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1038	Open in IMG/M
3300031736\|Ga0318501_10200366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1044	Open in IMG/M
3300031744\|Ga0306918_10190027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1542	Open in IMG/M
3300031751\|Ga0318494_10878758	Not Available	525	Open in IMG/M
3300031763\|Ga0318537_10008443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3430	Open in IMG/M
3300031763\|Ga0318537_10088481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1144	Open in IMG/M
3300031763\|Ga0318537_10224028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300031768\|Ga0318509_10138421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1337	Open in IMG/M
3300031768\|Ga0318509_10526857	Not Available	660	Open in IMG/M
3300031770\|Ga0318521_10753929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300031771\|Ga0318546_10442630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300031778\|Ga0318498_10153404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	1048	Open in IMG/M
3300031779\|Ga0318566_10124554	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300031780\|Ga0318508_1181763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300031782\|Ga0318552_10680983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300031792\|Ga0318529_10083752	All Organisms → cellular organisms → Bacteria → Proteobacteria	1423	Open in IMG/M
3300031792\|Ga0318529_10301400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300031793\|Ga0318548_10493974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300031794\|Ga0318503_10226186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300031794\|Ga0318503_10256039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	568	Open in IMG/M
3300031797\|Ga0318550_10431481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300031797\|Ga0318550_10616774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300031798\|Ga0318523_10328240	Not Available	763	Open in IMG/M
3300031798\|Ga0318523_10392911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300031805\|Ga0318497_10652002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300031823\|Ga0307478_11051253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300031832\|Ga0318499_10279472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300031846\|Ga0318512_10178194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1034	Open in IMG/M
3300031879\|Ga0306919_10458240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	981	Open in IMG/M
3300031879\|Ga0306919_10516330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300031880\|Ga0318544_10143497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300031893\|Ga0318536_10552837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300031894\|Ga0318522_10155388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300031897\|Ga0318520_10782657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300031912\|Ga0306921_10036986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5488	Open in IMG/M
3300031912\|Ga0306921_12025596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300031941\|Ga0310912_10173642	All Organisms → cellular organisms → Bacteria → Proteobacteria	1638	Open in IMG/M
3300031942\|Ga0310916_11068569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300031946\|Ga0310910_10627923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	851	Open in IMG/M
3300031947\|Ga0310909_11092304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	648	Open in IMG/M
3300031959\|Ga0318530_10195820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	828	Open in IMG/M
3300031959\|Ga0318530_10223099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300031962\|Ga0307479_11476453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300032001\|Ga0306922_11061331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300032010\|Ga0318569_10101748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1299	Open in IMG/M
3300032055\|Ga0318575_10222729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	949	Open in IMG/M
3300032068\|Ga0318553_10254757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	917	Open in IMG/M
3300032068\|Ga0318553_10391803	Not Available	727	Open in IMG/M
3300032076\|Ga0306924_10417839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	1534	Open in IMG/M
3300032076\|Ga0306924_12512282	Not Available	516	Open in IMG/M
3300032090\|Ga0318518_10228211	Not Available	955	Open in IMG/M
3300032090\|Ga0318518_10431072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300032090\|Ga0318518_10628141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300032090\|Ga0318518_10722935	Not Available	506	Open in IMG/M
3300032205\|Ga0307472_100805289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859	Open in IMG/M
3300032205\|Ga0307472_102480378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300032261\|Ga0306920_100560579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1692	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.09%
Host-Associated	Host-Associated	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.09%
Plants	Host-Associated → Plants	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.73%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	82.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	66.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070711_1017373371	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTNYPQSGLTALLDALERELLAAPADEVRSAWRESGRARNMACLEVQALLDEAIAASEDGSAAPSPSDTCAGLDRLLGV
Ga0070698_1009580321	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTRMDYPQSGLTALLDALERERLAAHADEVRDAWRESGRARNIACHEVRVLLNEAIAASEEGSAAPPPDTCT
Ga0070762_103960551	3300005602	Soil	MTRTNYPQSGLTALLDALERELLAAPADEVRSAWRESGRARNMACLEVQAPLDEAIAASEDGS
Ga0066903_1074326951	3300005764	Tropical Forest Soil	MSRTGNPQSGLTALLGALERDLLAAPADEVRSAWRGTGRARKIACEEARALLDEAIAASEEG
Ga0066903_1085195811	3300005764	Tropical Forest Soil	MTGIGYPQSALTALLDALERELLAAQADEVRDAGRETGRARNIAYQEVRALLNGAIAASEECFAAT
Ga0126384_106690391	3300010046	Tropical Forest Soil	MAMTRTDYPQSGLTALLDALERELLAAPADEVRSAWRESGRARNIACQEVRALLDEAIAVSEDGSAAPSPSDT
Ga0126382_120806372	3300010047	Tropical Forest Soil	MTRTRYPQSGLAALLDALERELLAAPVDEVREAWRGTDRARNIARQQIRALLNEAIAASLVASAPLFLPILFGAARLYVW
Ga0126373_115641172	3300010048	Tropical Forest Soil	MTRKDTPRSGLVALLDALEQEVLAAPAEEMRDALREAGRSGDIVCHEVRVLLNEAIAVSEDGF
Ga0126373_131220651	3300010048	Tropical Forest Soil	MGYPQSALTALLDALERELLAAQADEVRDAWRETGPARNIACQEVRALLNDAIAANEDGSAATLPPDTCAGIDR
Ga0126370_116496401	3300010358	Tropical Forest Soil	MTRTDNPQSRLAALLDTLEWELLAAPADEVRHAWRKTGRARDITCQAVRVLLNEAIAASEEG
Ga0126372_103210531	3300010360	Tropical Forest Soil	MIRTRFHPEPTALLDALERELLAAPAGEVRDAWRGTGRARSIACQEVRALLDDAIAASKEGDAATPPPDTGAGIDRLFDV
Ga0126378_125674621	3300010361	Tropical Forest Soil	MTRVGNPQSELTALLDALERELLAAPAHEVRNAWHKTGRARNIACQEVRALLNEAIDASEDGSAATPPFDA
Ga0126381_1024054982	3300010376	Tropical Forest Soil	MTRIGYRQSGLTALLDALEQELLSAHADELRDALRETGRTHTIACLEVRALLNEAVAAS
Ga0137392_115917771	3300011269	Vadose Zone Soil	MDYPQSGLTALLDALERELLAAHADEVRDAWRETGRAHNIACQEVRALLDEAIAASEDGSAAPPPPDTCAG
Ga0126369_109129751	3300012971	Tropical Forest Soil	MTRLAYPQSELTALLDALERELLAAPAHEVRNAWRKSGRARNIACQEVRALLNEAIAASEERSAMTPLFDTFAGTGLDRLLGV
Ga0182041_101305363	3300016294	Soil	MTRTGNPHSRLTALLDALEAELLAAPADEVRNALREAGRAGNVACQEVRALLNEAIAASEDGSA
Ga0182032_105678011	3300016357	Soil	MTRTRYPQSGLAALLDALERELLAAPVDEVREACRGTDRARNIARQQIRTLLNEAIAASEEGSAAIPL
Ga0182032_110217822	3300016357	Soil	MTRIRYPQSGLTALLDALERELLAAPAAEMRDAWRETGRARNVVCEEVRTLLDEAIAASEDGSAAMPPPDTCAG
Ga0182034_104352511	3300016371	Soil	MTRTGSPQFGLTALLDALERELLAAQADEVPDALRESGRARNIVCQEIRALLNEAIAESEDGTA
Ga0182039_101862781	3300016422	Soil	MTRIGYPRSALTALLDGLERELLSAHADEVRDALRETGRTHTIACLEVRALLNEAVAASE
Ga0210399_106030362	3300020581	Soil	MTRIGYPQSKLTALLDALERELLAADADEVRDARREGDAAVKIACQEVRAVLDEAIATSEEDSDRALPDSCTGLD
Ga0210399_111063411	3300020581	Soil	MTRMGYPQSGLTALLDALERELLAAQADEVRDAWRESGRARNIACQEVRALLNEAIAASE
Ga0210405_100646483	3300021171	Soil	MTRMDYQQSGLTALLDALERELLAAPGDEVRDALREAGRARNIACQEVRALLNEAIAASEEGSAATLLPDTCTGLDR
Ga0210388_106328181	3300021181	Soil	MTRTGYPQSGLTALLDALERELLAAQTDEVRDAWRGTGRARNIARQEVRALLNEAIAASEEGSAAPPPDTRTGLDRLLGVS
Ga0213873_102137162	3300021358	Rhizosphere	MTRIGYPLSELPALLDAFEREILAADADEVRAAWRGRARNIAYQEVRAVLNEAIAASEEGSVATLPPDS
Ga0210386_112565062	3300021406	Soil	MIRTRFHPELTALLDALERELLAAPAGEVRDAWGRTGRARSIACQEVRALLDEAIAAGEDGSAPTPLPDTCTGIDQL
Ga0210384_106431462	3300021432	Soil	MTRIGYPQSKLTALLDALERELLAADADEVRDARREGDAAVKIACQEVRAVLDEAIATSEEDSDRALPDSCTGLDRLL
Ga0210384_111226182	3300021432	Soil	LVLAMIRTRFHPELTALLDALERELLAAPAGEVRDAWRGTGRARSIACQEVRALLDEAI
Ga0210384_117184831	3300021432	Soil	MTFMKYARSELTALLDALEGEFLAAPADEVRDAWREAGRARNIACQEVRALLNDAIAASEDGFAVTPPHGACTGLDRLLGASR
Ga0210402_104730323	3300021478	Soil	MTRIRDPQSGLTALLDAWEQELLAAHAVEVRNALRETGRARNIAGREIRALLNEAIAASEEGSTATLPPDTYTGLGRLHGASREL
Ga0126371_112950581	3300021560	Tropical Forest Soil	MTRIGYPRSALTVLLDALERELLAAPAAEVRDAWRGTGRARSIACQEVRALLDEAIAASEDGSAATPPSDTCAGIDRLFDVLRQL
Ga0207663_109963841	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MIRTRFHPELTALLDALERELLAAPAGEVRDAWRGTDRARSIACQEVRALLDEAIAAGEDGSAPTP
Ga0209465_101928153	3300027874	Tropical Forest Soil	MTRIGYPRSALTVLLDALERELLAAPAAEVRDAWRGTGRARSIACQEVRALLDDAIAASKEGDAATPPPDTGAG
Ga0318541_107087372	3300031545	Soil	MTGTGYPQSGLTALLDALERELLAAPADEVRDAWRKRGRERNIARQEVRAFLNEAIAASEEGS
Ga0318538_103928322	3300031546	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLNEAIAASEEASAAAPPPDACAGLGRFLGV
Ga0318573_100897401	3300031564	Soil	MTRIRYSQSGLTALLDALERELLAAPADEVRDAWRATGRARDFACEEVRTLLDEAMAAI
Ga0310915_105497181	3300031573	Soil	MTRTVSPQSGLTALLDALEGELLAAPADDLRDALCEAGRAGTLVCHEVRALLNEA
Ga0310915_111446811	3300031573	Soil	MTRTGDPQSRLAALLDALEREILAAQPDEIRDAWHGTGRAREIALQEVRALLDEAIAASEEGPAAT
Ga0318542_100796163	3300031668	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLNEAIAASE
Ga0318542_105428702	3300031668	Soil	MTRTGNPHSRLTALLDALEAELLAAPADEVRNALREAGRAGNVACQEVRALLNEAIAAS
Ga0318561_100948951	3300031679	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLNEAIAAS
Ga0318561_101230963	3300031679	Soil	MTRTGDPQSRLAALLDALEREILAAQPDEIRDAWHGTGRAREIALQEVRALLDEAIAASEEGPAAALL
Ga0318574_107524741	3300031680	Soil	MTGTGYPQSGLTALLDALERELLAAPADEVRDAWRKRGRERNIARQEVRAFLNEAIAASE
Ga0318572_100143114	3300031681	Soil	MTRIGYPRSALTALLDGLERELLSAHADEVRDALRETGRTHTIACLEVRALLNEAVAASEEGSAATLLPDACSELDR
Ga0318560_102401313	3300031682	Soil	MTRTGNPHSRLTALLDALEAELLAAPADEVRNALREAGRAGNVACQEVRALLNEAIAASEDGSAATAWFDTFA
Ga0318560_102709893	3300031682	Soil	MTRIRYSQSGLTALLDALERELLAAPADEVRDAWRATGRARDFACEEVRTLLDEAMAAIDDGS
Ga0318493_103698042	3300031723	Soil	MTRTGNPHSGLTALLDAFEAELLAAPADEVRDALREAGRAGNVACQEVRALLNEAIAASEDGSAATAWFDTCAGTG
Ga0318493_107601742	3300031723	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLNEAIAASEEASAAAPPPDACAGLDRFLGVPR
Ga0318500_100562621	3300031724	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLNEAIAASEEASA
Ga0318500_101685081	3300031724	Soil	MTRTGNPHSGLTALLDAFEAELLAAPADEVRDALREAGRAGNVACQEVRALLNEAIAASEDGSAAMA
Ga0318501_102003662	3300031736	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLNEAIAASEEASAAAPPPDACAGLD
Ga0306918_101900274	3300031744	Soil	MTRMGSPQFGLTALLDALERELLAAQADEVPDALRESGRARNIVCQEIRALLNEAIAESEDGTAATLPRDICPGLDRLLG
Ga0318494_108787582	3300031751	Soil	MTRTCNPPSRLTALLDVLEAELLAAPADEVRDALREAGRAGNVACQEVRALLNEAIA
Ga0318537_100084433	3300031763	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLNEAIAASEEASAAAPPPDACAGLDRF
Ga0318537_100884811	3300031763	Soil	MTRIGYPRSALTALLDGLERELLSAHADEVRDALRETGRTHTIACLEVRALLNEAVAASEEG
Ga0318537_102240282	3300031763	Soil	MTRIRYPQSGLTALLDALERELLAAPAAEVRDAWREPGRARNIVCQEVRALLDEA
Ga0318509_101384211	3300031768	Soil	MTRTGDPQSRLAALLDALEREILAAQPDEIRDAWHGTGRAREIALQEVRALLDEAIAASEEGPAAALLPDTCTGLGRLPG
Ga0318509_105268572	3300031768	Soil	LVLAMTRTGNPHCGLTALLDAFEAELLAAPADEVRDALREAGRAGNVACQEVRALLNEAIAASEDGSAAM
Ga0318521_102316753	3300031770	Soil	MTRTGNPHSRLTALLDALEAELLAAPADEVRNALREAGRAGNVACQEVRALLN
Ga0318521_107539292	3300031770	Soil	MTRMGSPQFGLTALLDALERELLAAQAGEVLDALRECGRARNIVCREICQEIRALLNEAIVASEE
Ga0318546_104426302	3300031771	Soil	MTRMGSPQFGLTALLDALERELLAAQADEVPDALRESGRARNIVCQEIRALLNEAIAESEDGTAATLPR
Ga0318498_101534043	3300031778	Soil	MTRTGDPQSRLAALLDALEREILAAQPDEIRDAWHGTGRAREIALQEVRALLDEAIAASEEGPAATLLPDTCTGLG
Ga0318566_101245543	3300031779	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLNEAIAASEEAS
Ga0318508_11817632	3300031780	Soil	MTRTCNPHSRLTALLDALEAELLAAPADKVRDALREAGRAGNVACQEVRALLNEAIAASEDGSAAT
Ga0318552_106809832	3300031782	Soil	MTRVGYPQSILTALLDALERQLLAANADEVCDACRETGRAHKIACQEVRALLNEAIATSQEGST
Ga0318529_100837523	3300031792	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLNEAIAASEEASAAAPPPDACAG
Ga0318529_103014002	3300031792	Soil	MTRTCNPPSRLTALLDVLEAELLAAPADEVRDALREAGRAGNVACQEVRALLNEAIAASEDGPAATLPPDACT
Ga0318548_104939742	3300031793	Soil	MTRIRYPQSGLTALLDALERELLAAPAAEVRDAWRETGRARNIVCEEVRALLDEAIAASEDGSAARPPPDTCAGLDRLLGVSR
Ga0318503_102261862	3300031794	Soil	MTRTGNPHSRLTALLDALEAELLAAPADEVRNALREAGRAGNVACQEVRALLNEAIAASE
Ga0318503_102560392	3300031794	Soil	MTRTRYPQSGLAALLDALERELLAAPVDEVREACRGTDRARNIARQQIRTLLNEAIAASEEGSAAIPLPDTW
Ga0318550_104314811	3300031797	Soil	MTRTCNPPSRLTALLDVLEAELLAAPADEVRDALREAGRAGNVACQEVRALLNEAIAASE
Ga0318550_106167741	3300031797	Soil	MTRTCNPHSRLTALLDALEAELLAAPADKVRDALREAGRAGNVACQEVRALLNEAIAASEDGSAATAWFD
Ga0318523_103282401	3300031798	Soil	MTRMGSPQFGLTALLDALERELLAAQADEVPDALRESGRARNIVCQEIRALLNEAIAESEDGTAATLPRDICPG
Ga0318523_103929112	3300031798	Soil	MTRIGYPRSALTALLDGLERELLSAHADEVRDALRETGRTHTIACLEVRALLNEAVAASEEGSAATLLPDA
Ga0318497_103344633	3300031805	Soil	MTRTGNPHSRLTALLDALEAELLAAPADEVRNALREAGRAGNVACQEVRAFL
Ga0318497_106520022	3300031805	Soil	MTRTGSPQFGLTALLDALERELLAAQADEVPDALRESGRARNIVCQEIRALLNEAIA
Ga0307478_110512532	3300031823	Hardwood Forest Soil	MTRMDYQQSGLTALLDALERELLAAPGDEVRDALREAGRARNIACQEVRALLNEAIAASEEGSA
Ga0318499_102794721	3300031832	Soil	MTRIGYPRSALTALLDGLERELLSAHADEVRDALRETGRTHTIACLEVRALLNEAVAASEEGSAATLLPDACSELD
Ga0318517_101253181	3300031835	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLN
Ga0318512_101781941	3300031846	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRDAWRETGRARNIAYQEVRVLLNEAIAASEEASAAAPPPDACA
Ga0306919_104582403	3300031879	Soil	MTRTGNPHSRLTALLDALEAELLAAPADEVRNALREAGRAGNVACQEVRALLNEAIAASEDGSAATAWFDTFAG
Ga0306919_105163302	3300031879	Soil	MTRMGSPQFGLTALLDALEGELLAAQADEVPDALRESGRARNIVCQEIRALLNEAIAESEDGSAETLPPDFCTGLHRLLGFS
Ga0318544_101434973	3300031880	Soil	MTRTSNPHSRLTALLDALEAELLAAPADKVRDALREAGRAGNVACQEVRALLNEAIAASEDGPAAT
Ga0318536_105528371	3300031893	Soil	MTRPGNPQSRLAALLDALEREILAAQTDEMRGAWRGTGRARNIALQEVRALLDEAIAASEEGPA
Ga0318522_101553881	3300031894	Soil	MTRIGYPRSALTALLDGLERELLSAHADEVRDALRETGRTHTIACLEVRALLNEAVAASEEGSAATLLPD
Ga0318520_107826571	3300031897	Soil	MTRTCNPHSRLTALLDALEAELLAAPADEVRDALREAGRAGNVACQEVRALLNEAIAA
Ga0306921_100369861	3300031912	Soil	MTRIRYSQSGLTALLDALERELLAAPADEVRDAWRATGRARDFACEEVRTLLDEAMAAIDDGSA
Ga0306921_120255962	3300031912	Soil	MTRTGNPHSRLTALLDALEAELLAAPAAEVRDALREAGRAGNVACQEVRAMLNEAIAASEDGSAATVWFDTCA
Ga0310912_101736423	3300031941	Soil	MTGTGYPQSGLTALLDALERELLAAPADEVRDAWRKRGRERNIARQEVRAFLNEAIAASEEGSAEHCRP
Ga0310916_110685691	3300031942	Soil	MTRTCNPPSRLTALLDVLEAELLAAPADEVRDALREAGRAGNVACQEVRALLNEAIAASEDGPAATLPPDACTGLDQ
Ga0310910_106279232	3300031946	Soil	MTRTCNPHSRLTALLDALEAELLAAPADEVRDALREAGRAGNVACQEVRALLNEATAASEDGSAATAWFDTCAGTGLDR
Ga0310909_110923041	3300031947	Soil	MTRTGSPQFGLTALLDALERELLAAQADEVPDALRESGRARNIVCQEIRALLNEAIAES
Ga0318530_101958202	3300031959	Soil	MTRTGDPQSRLAALLDALEREILAAQPDEIRDAWHGTGRAREIALQEVRALLDEAIAATEEGPAATLLPDTC
Ga0318530_102230992	3300031959	Soil	MTRIGYPRSALTALLDGLERELLSAHADEVRDALRETGRTHTIACLEVRALLNEAVAASEEGSAATLLPDACSELDRH
Ga0307479_114764532	3300031962	Hardwood Forest Soil	MTRIGYPQSELTALLDAFERELLAAHADEVRDAWPETGRARNIACQEVRALLNEAIAASEDGSAAPSPSD
Ga0306922_110613311	3300032001	Soil	MTCTGNPHSRLTALLDALEAELLAAPADKVRDALREAGRAGNVACQEVRALLNEAISASEDS
Ga0318569_101017481	3300032010	Soil	MTRTGDPQSRLAALLDALEREILAAQPDEIRDAWHGTGRAREIALQEVRALLDEAIAASEEGPAA
Ga0318575_102227291	3300032055	Soil	MTRIRYSQSGLTALLDALERELLAAPADEVRDAWRATGRARDFACEEVRTLLDEAMAAIDDGSASTLPPG
Ga0318553_102547573	3300032068	Soil	MTRVGYPQSILTALLDALERQLLAANADEVCDACRETGRAHKIACQEVRALLNEAIATSQ
Ga0318553_103918031	3300032068	Soil	MTGTGYPQSGLTALLDALERELLAAPADEVRDAWRKRGRERNIARQEVRAFLNEAIAASEEGSAEHCRPTAPAW
Ga0306924_104178391	3300032076	Soil	MTGTRYPQSALAALLDALERELLAAPVDEVREAWRGTDRARNIARQQIRALLNEAIAASEEGSAAIPPPDTWTGLDRRLI
Ga0306924_125122821	3300032076	Soil	MTRMDYPQSRLSALLDALERELLAVPAYEVRADLREAGRAHNIARQEVRVLLNEAIAASEEDSASASPPDTRAGLDRLLGVS
Ga0318518_102282112	3300032090	Soil	MTGTGYPQSGLTALLDALERELLAAPADEVRDAWRKRGRERNIARQEVRAFLNEAIAASEEGSAEHCR
Ga0318518_104310721	3300032090	Soil	MTRMDYPQSGLTALLDALERELLAAHADELRNAWRETGRARNIAYQEVRVLLNEAIAASEEASAAAPPPDACAGLDRFL
Ga0318518_106281411	3300032090	Soil	MTRTGDPQSRLAALVDALEREILAAQPDEIRDAWHGTGRAREIALQEVRALLDEAIAASEEGPAAALLPDTCTGLG
Ga0318518_107229352	3300032090	Soil	MTRTRYPQSGLAALLDALERELLAAPVDEVREAWRGTDRARNIARQQIRALLNEAIAASEEGSAAIPPPDTWTGLD
Ga0318577_100710691	3300032091	Soil	MTRIRYSQSGLTALLDALERELLAAPADEVRDAWRATGRARDFACEEVRTLLDEAMA
Ga0307472_1008052892	3300032205	Hardwood Forest Soil	MTRTGYPQSGLTALLDALERELLAAQTDEVRDAWRGTGRARNIARQEVRALLNEAIAASEEGLTATLPPDTYTGLGRL
Ga0307472_1024803781	3300032205	Hardwood Forest Soil	MIRTRFHPELTALLDALERELLAAPAGEVRDAWRGTGRARSIACQEVRALLDEAIAAGEDGSAPT
Ga0306920_1005605791	3300032261	Soil	MTRVGYPQSILTALLDALERQLLAANADEVCDACRETGRAHKIACQEVRALLNEAIATSQEGSTATLPP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086435

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences