NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F086301

Metagenome Family F086301

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F086301
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 53 residues
Representative Sequence MCLQKCPKCNQDHIHYLGDNCTGEIEDWHCPTCDAHYEVDVVINRHFETMREVVV
Number of Associated Samples 84
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 88.18 %
% of genes near scaffold ends (potentially truncated) 29.73 %
% of genes from short scaffolds (< 2000 bps) 87.39 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (59.459 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(23.423 % of family members)
Environment Ontology (ENVO) Unclassified
(76.577 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(92.793 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 47.27%    Coil/Unstructured: 52.73%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF11284DUF3085 2.70
PF13148DUF3987 0.90
PF01476LysM 0.90



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A59.46 %
All OrganismsrootAll Organisms40.54 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10096352Not Available1246Open in IMG/M
3300000101|DelMOSum2010_c10278191Not Available511Open in IMG/M
3300000115|DelMOSum2011_c10144460Not Available714Open in IMG/M
3300001450|JGI24006J15134_10046559Not Available1803Open in IMG/M
3300001450|JGI24006J15134_10130937All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium850Open in IMG/M
3300001460|JGI24003J15210_10118312Not Available727Open in IMG/M
3300001589|JGI24005J15628_10127723Not Available807Open in IMG/M
3300002242|KVWGV2_10378386All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300002482|JGI25127J35165_1046154Not Available956Open in IMG/M
3300004829|Ga0068515_107880All Organisms → Viruses → Predicted Viral1346Open in IMG/M
3300004829|Ga0068515_111587All Organisms → Viruses → Predicted Viral1106Open in IMG/M
3300004829|Ga0068515_128151Not Available703Open in IMG/M
3300006025|Ga0075474_10109545All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium887Open in IMG/M
3300006027|Ga0075462_10164365Not Available675Open in IMG/M
3300006029|Ga0075466_1000864All Organisms → cellular organisms → Bacteria → Proteobacteria11230Open in IMG/M
3300006029|Ga0075466_1027021All Organisms → Viruses → Predicted Viral1814Open in IMG/M
3300006029|Ga0075466_1042408Not Available1371Open in IMG/M
3300006735|Ga0098038_1007487All Organisms → cellular organisms → Bacteria4389Open in IMG/M
3300006735|Ga0098038_1096434All Organisms → Viruses → Predicted Viral1023Open in IMG/M
3300006735|Ga0098038_1140018Not Available811Open in IMG/M
3300006735|Ga0098038_1142132Not Available804Open in IMG/M
3300006735|Ga0098038_1204571Not Available637Open in IMG/M
3300006737|Ga0098037_1058128All Organisms → Viruses → Predicted Viral1383Open in IMG/M
3300006790|Ga0098074_1093944Not Available798Open in IMG/M
3300006802|Ga0070749_10447169All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300006920|Ga0070748_1295906Not Available576Open in IMG/M
3300006929|Ga0098036_1039422All Organisms → Viruses → Predicted Viral1475Open in IMG/M
3300006929|Ga0098036_1060365All Organisms → Viruses → Predicted Viral1172Open in IMG/M
3300007540|Ga0099847_1021990Not Available2072Open in IMG/M
3300007963|Ga0110931_1203050Not Available592Open in IMG/M
3300008216|Ga0114898_1071078All Organisms → Viruses → Predicted Viral1075Open in IMG/M
3300008216|Ga0114898_1072747All Organisms → Viruses → Predicted Viral1060Open in IMG/M
3300008217|Ga0114899_1050830Not Available1479Open in IMG/M
3300008218|Ga0114904_1032445All Organisms → Viruses → Predicted Viral1445Open in IMG/M
3300009001|Ga0102963_1281698Not Available655Open in IMG/M
3300009124|Ga0118687_10006930All Organisms → cellular organisms → Bacteria3812Open in IMG/M
3300009414|Ga0114909_1071070Not Available991Open in IMG/M
3300009414|Ga0114909_1157923Not Available597Open in IMG/M
3300009602|Ga0114900_1160281Not Available575Open in IMG/M
3300010148|Ga0098043_1207014Not Available542Open in IMG/M
3300010149|Ga0098049_1269145Not Available516Open in IMG/M
3300010300|Ga0129351_1313680Not Available592Open in IMG/M
3300010300|Ga0129351_1385083All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300010883|Ga0133547_11429465All Organisms → Viruses → Predicted Viral1303Open in IMG/M
3300011013|Ga0114934_10111469All Organisms → Viruses → Predicted Viral1321Open in IMG/M
3300012920|Ga0160423_10038701Not Available3505Open in IMG/M
3300012953|Ga0163179_10644193Not Available894Open in IMG/M
3300017697|Ga0180120_10321627Not Available616Open in IMG/M
3300017697|Ga0180120_10429793Not Available516Open in IMG/M
3300017720|Ga0181383_1138005Not Available655Open in IMG/M
3300017731|Ga0181416_1138118Not Available587Open in IMG/M
3300017734|Ga0187222_1024437Not Available1457Open in IMG/M
3300017744|Ga0181397_1050470Not Available1152Open in IMG/M
3300017745|Ga0181427_1026271All Organisms → Viruses → Predicted Viral1452Open in IMG/M
3300017753|Ga0181407_1014285All Organisms → Viruses → Predicted Viral2241Open in IMG/M
3300017755|Ga0181411_1174986Not Available610Open in IMG/M
3300017759|Ga0181414_1051729All Organisms → Viruses → Predicted Viral1099Open in IMG/M
3300017759|Ga0181414_1067319Not Available952Open in IMG/M
3300017760|Ga0181408_1080211All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300017773|Ga0181386_1145448Not Available726Open in IMG/M
3300017773|Ga0181386_1172798Not Available656Open in IMG/M
3300017824|Ga0181552_10072964All Organisms → Viruses → Predicted Viral1956Open in IMG/M
3300017951|Ga0181577_10262897All Organisms → Viruses → Predicted Viral1131Open in IMG/M
3300017963|Ga0180437_11229622Not Available533Open in IMG/M
3300018421|Ga0181592_10120725All Organisms → Viruses → Predicted Viral2020Open in IMG/M
3300018426|Ga0181566_10222574All Organisms → Viruses → Predicted Viral1388Open in IMG/M
3300018426|Ga0181566_10768181Not Available659Open in IMG/M
3300018426|Ga0181566_10867689All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300018428|Ga0181568_11347650Not Available531Open in IMG/M
3300020176|Ga0181556_1233000Not Available675Open in IMG/M
3300020381|Ga0211476_10110232All Organisms → Viruses → Predicted Viral1025Open in IMG/M
3300020388|Ga0211678_10272478Not Available694Open in IMG/M
3300020404|Ga0211659_10292995Not Available717Open in IMG/M
3300020474|Ga0211547_10311366Not Available798Open in IMG/M
3300021375|Ga0213869_10060344All Organisms → Viruses → Predicted Viral1940Open in IMG/M
3300021378|Ga0213861_10417249All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium656Open in IMG/M
3300021957|Ga0222717_10161050All Organisms → Viruses → Predicted Viral1359Open in IMG/M
3300021958|Ga0222718_10191087All Organisms → Viruses → Predicted Viral1124Open in IMG/M
3300021961|Ga0222714_10550541Not Available584Open in IMG/M
3300021964|Ga0222719_10292374All Organisms → Viruses → Predicted Viral1060Open in IMG/M
3300022072|Ga0196889_1035691Not Available995Open in IMG/M
3300022072|Ga0196889_1052326Not Available789Open in IMG/M
3300022072|Ga0196889_1088868Not Available570Open in IMG/M
3300022072|Ga0196889_1105933Not Available509Open in IMG/M
3300022074|Ga0224906_1011691All Organisms → cellular organisms → Bacteria3367Open in IMG/M
3300022074|Ga0224906_1034781All Organisms → Viruses → Predicted Viral1697Open in IMG/M
3300022929|Ga0255752_10340810Not Available616Open in IMG/M
3300024344|Ga0209992_10063116All Organisms → Viruses → Predicted Viral1731Open in IMG/M
3300025070|Ga0208667_1024479Not Available1135Open in IMG/M
3300025120|Ga0209535_1197513Not Available570Open in IMG/M
3300025127|Ga0209348_1029481Not Available1978Open in IMG/M
3300025127|Ga0209348_1181024Not Available601Open in IMG/M
3300025128|Ga0208919_1041364All Organisms → Viruses → Predicted Viral1617Open in IMG/M
3300025137|Ga0209336_10025454Not Available2046Open in IMG/M
3300025138|Ga0209634_1029460All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2928Open in IMG/M
3300025168|Ga0209337_1187514Not Available855Open in IMG/M
3300025251|Ga0208182_1046633Not Available915Open in IMG/M
3300025264|Ga0208029_1011163All Organisms → Viruses → Predicted Viral2486Open in IMG/M
3300025286|Ga0208315_1135046Not Available560Open in IMG/M
3300025286|Ga0208315_1157379Not Available503Open in IMG/M
3300025305|Ga0208684_1115148Not Available658Open in IMG/M
3300025508|Ga0208148_1000044Not Available44055Open in IMG/M
3300025508|Ga0208148_1069202Not Available823Open in IMG/M
3300025630|Ga0208004_1111466Not Available636Open in IMG/M
3300025645|Ga0208643_1116638Not Available713Open in IMG/M
3300029319|Ga0183748_1026608All Organisms → Viruses → Predicted Viral1938Open in IMG/M
3300029319|Ga0183748_1029491All Organisms → Viruses → Predicted Viral1795Open in IMG/M
3300029787|Ga0183757_1008998All Organisms → Viruses → Predicted Viral2953Open in IMG/M
3300031519|Ga0307488_10280223All Organisms → Viruses → Predicted Viral1084Open in IMG/M
3300032277|Ga0316202_10482898Not Available582Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine23.42%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous15.32%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater12.61%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean10.81%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh8.11%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.31%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.60%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.60%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine2.70%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water2.70%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.80%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.80%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.90%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.90%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.90%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.90%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.90%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.90%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment0.90%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300002242Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey matEnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300004829Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVsEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006790Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009602Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017734Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020381Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020404Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025286Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1009635223300000101MarineMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVVFE*
DelMOSum2010_1027819113300000101MarineMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETM
DelMOSum2011_1014446023300000115MarineMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCKTCDAHYEVDVNIHRHFETMREVVFE*
JGI24006J15134_1004655923300001450MarineMCVQRCPKCNEDDIHYLGDNCTGEMEDWHCPNCDTHYEVDVEINRHFENMREVVV*
JGI24006J15134_1013093723300001450MarineMSMEKCPKCCKDNLTYVGDNCTGEIEDWHCMSCDTFYEVDVEIKRHFNNMREVQYES*
JGI24003J15210_1011831223300001460MarineMCVQRCPKXXEDDIHYLGDXCTGEMEDWHCPNCDTHYEVDVEINRHFXXMREVVV*
JGI24005J15628_1012772333300001589MarineMCVQRCPKCNEDDIHYLGDNCTGEMEDWHCPNCDTHYEVDVEINRHFETMREVVV*
KVWGV2_1037838623300002242Marine SedimentPKCNEEDIHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFETMREVVL*
JGI25127J35165_104615433300002482MarineMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVDVVINRHFDSMREVVV*
Ga0068515_10788023300004829Marine WaterMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCPTCDAFYEVDVVINRHFETMREVVFE*
Ga0068515_11158723300004829Marine WaterMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCPTCDAFYEVDVNIHRHFETMREVVFE*
Ga0068515_12815113300004829Marine WaterMCLQKCPKCNQDFIHYLGDNCTGEIEDWHCPTCDAHYEVDVVINRHFETMREVVFE*
Ga0075474_1010954523300006025AqueousMSIEKCPKCCKDNLTYVGDNCTGEIEDWHCMSCDTFYEVDIEIKRHFNNMREVRYES*
Ga0075462_1016436513300006027AqueousMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCPTCDAHYEVDVVINRHFETMREVVFE*
Ga0075466_1000864243300006029AqueousMCLQKCPKCNEDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVVFE*
Ga0075466_102702143300006029AqueousMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVEVDINRHFDTMREAVI*
Ga0075466_104240813300006029AqueousMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFE
Ga0098038_100748753300006735MarineMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVVV*
Ga0098038_109643413300006735MarineKCNEDDLHYLGDNCTGEIEDWGCPKCDTCYEVDVDINRHFETMREVVV*
Ga0098038_114001813300006735MarinePKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVVFE*
Ga0098038_114213233300006735MarineMCVQRCPKCNEDDLHYLGDNCTGEIEDWGCPKCDTCYEVDVDINRHFDTMREVVV*
Ga0098038_120457123300006735MarineMCVQRCPKCNEDDLHYLGDNCTGEIEDWGCPKCDTCYEVDVDINRH
Ga0098037_105812813300006737MarineIMCVQRCPKCNEDDLHYLGDNCTGEIEDWGCPKCDTCYEVDVDINRHFDTMREVVV*
Ga0098074_109394423300006790MarineMCVQRCPKCNEEDLHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFETMREVVV*
Ga0070749_1044716923300006802AqueousMCVQRCPKCNEADLHYLGDNCTGEIEDWHCPTCDAHYEVDVNIHRHFETMREVVFE*
Ga0070748_129590613300006920AqueousMCLQKCPKCNEDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVV
Ga0098036_103942253300006929MarineMCVQRCPKCNEDDLHYLGDNCTGEIEDWGCPKCDTCYEVDVDINRHFETMREVVV*
Ga0098036_106036513300006929MarineCNEDDLHYLGDNCTGEIEDWGCPKCDTCYEVDVDINRHFDTMREVVV*
Ga0099847_102199013300007540AqueousMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVEVDINRHFDTMRE
Ga0110931_120305023300007963MarineMCVQRCPKCNEEDLRYQADKCTGEIEDWHCPNCDTYYEVDVVINRHFETMREVVV*
Ga0114898_107107823300008216Deep OceanMWVQRCPKCNEDDLRYQGDICTGEMEEWSCPNCETEYVVEVDINRHFDTMREVVV*
Ga0114898_107274713300008216Deep OceanMCVQRCPKCNEEDIHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFETMREVVL*
Ga0114899_105083013300008217Deep OceanMCVQRCPKCNEEDIHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFDTMREVVL*
Ga0114904_103244523300008218Deep OceanMCVQRCPKCNKDDLRYQGDICTGEMEEWSCPNCETEYVVEVDINRHFDTMREVVV*
Ga0102963_128169823300009001Pond WaterMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCQTCDAHYEVDVNIHRHFETMRE
Ga0118687_1000693043300009124SedimentMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCQTCDAHYEVDVNIHRHFETMREVVFE*
Ga0114909_107107013300009414Deep OceanMCVQRCPKCNEDDLRYQGDICTGEMEEWSCPNCETEYVVEVDINRHFDTMREVVV*
Ga0114909_115792313300009414Deep OceanGFIMCVQRCPKCNEEDIHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFETMREVVL*
Ga0114900_116028123300009602Deep OceanMCVQRCPKCNEDDLRYQGDICTGEMEEWSCPNCETEYVVEVDINRHFDTMR
Ga0098043_120701413300010148MarineMCVQRCPKCNEDDLHYLGDNCTGEIEDWGCPKCDTCYEVDVDINRHFD
Ga0098049_126914523300010149MarineMSMEKCPKCYKDDLTYLGDNCTGEIEDWHCMSCDTHYEVDIEINRHFDSMREVAI*
Ga0129351_131368023300010300Freshwater To Marine Saline GradientMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCPTCDAHYEVDVVINRHFETMREVVV*
Ga0129351_138508323300010300Freshwater To Marine Saline GradientMSIEKCPKCCKDNLTYVRDNCTGEIEDWHCMSCDTFYEVDIEIKRHFNNMREVRYES*
Ga0133547_1142946543300010883MarineMCVQKCPKCNEEDIHYLGDNCTGEIEDWHCPNCDTHYEVDVEINRHFETMREVVV*
Ga0114934_1011146923300011013Deep SubsurfaceRGFIMCVQRCPKCNEEDIHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFETMREVVL*
Ga0160423_1003870163300012920Surface SeawaterMCVQRCPKCNEEDLRYQADKCTGEIEDWYCPNCDTYYEVDVVINRHFETMREVVV*
Ga0163179_1064419323300012953SeawaterMCVQRCPKCNEEDLHYLGDKCTGEIEDWHCPNCETYYEVDVVINRHFETMREVVV*
Ga0180120_1032162723300017697Freshwater To Marine Saline GradientMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCPTCDAHYEVDVVINRHFETM
Ga0180120_1042979313300017697Freshwater To Marine Saline GradientMCLQKCPKCNEDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIH
Ga0181383_113800523300017720SeawaterMCVQRCPKCNEEDIHYLGDNCTGEIENWHCPNCDTHYEVDVVINRHFETMREVVL
Ga0181416_113811813300017731SeawaterMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFET
Ga0187222_102443733300017734SeawaterMCVQRCPKCNEEDIHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFET
Ga0181397_105047033300017744SeawaterMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVEVDINRHFDTMREVVI
Ga0181427_102627133300017745SeawaterMCLQKCPKCNQDFIHYLGDNCTGEIEDWHCPTCDAHYEVDVNIHRHFETTREVVFE
Ga0181407_101428523300017753SeawaterMCLQKCPKCNQDHIHYVGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVVFE
Ga0181411_117498613300017755SeawaterMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCQTCDAHYEVDVNIHRHFETMREVVFE
Ga0181414_105172933300017759SeawaterMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTHYEVDVVINRHFDTM
Ga0181414_106731923300017759SeawaterMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHLETMREAVFE
Ga0181408_108021123300017760SeawaterMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVEVEINRHFENMREVVV
Ga0181386_114544813300017773SeawaterMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVEVVINRHFDTMRELVI
Ga0181386_117279823300017773SeawaterMCVQRCPKCNEENIHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFETMREVVL
Ga0181552_1007296413300017824Salt MarshMCLQKCPKCNQDFIHYLGDNCTGEIEDWHCPTCDAHYEVDVVINRHFETMREVVFE
Ga0181577_1026289723300017951Salt MarshMCLQKCPKCNQDFIHYLGDNCTGEMEDWHCPTCDAHYEVDVVINRHFETMREVVV
Ga0180437_1122962223300017963Hypersaline Lake SedimentMCLQKCPKCNQDHIHYVGDNCTGEIEDWHCPTCDAFYEVDVNIHRHFETMREVVFE
Ga0181592_1012072523300018421Salt MarshMCLQKCPKCNQDYIHYLGDNTTGEMEDWHCPTCDAHYEVDVVINRHFETMREVVV
Ga0181566_1022257433300018426Salt MarshMCLQKCPKCNQDFIHYLGDNCTGEIEDWHCPTCDAHYEVDVNIHRHFETMREGK
Ga0181566_1076818123300018426Salt MarshMCLQKCPKCNQDFIHYLGDNCTGEIEDWHCPTCDAHYEVDVNIHRHFETMRELVFE
Ga0181566_1086768913300018426Salt MarshKCNQDFIHYLGDNCTGEIEDWHCPTCDAHYEVDVVINRHFETMREVVV
Ga0181568_1134765013300018428Salt MarshMCLQKCPKCNQDFIHYLGDNCTGEIEDWHCPTCDAHYEVDVVINRHFETMREVVV
Ga0181556_123300013300020176Salt MarshMCVQRCPKCNEEDLRYWGDIATGEIEEWGCKNCDTSFVVDVKITRHFETMREVVFE
Ga0211476_1011023223300020381MarineMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCPTCDAFYEVDVNIHRHFETMREVVFE
Ga0211678_1027247823300020388MarineMCLQKCPKCNQDHIHYLGDNCTGEVEDWHCQTCDAHYEVDVNIHRHFET
Ga0211659_1029299523300020404MarineMCVQRCPKCNEDDLHYLGDNCTGEIEDWGCPKCDTCYEVDVDINRHFDTMREVVV
Ga0211547_1031136613300020474MarineMCVQRCPKCNEDDLRYQGDICTGEMEEWSCPNCETEYVVEVDINRHFDTMREVVI
Ga0213869_1006034433300021375SeawaterMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVVFE
Ga0213861_1041724923300021378SeawaterMSIEKCPKCCKDNLTYVGDNCTGEIEDWHCMSCDTFYEVDIEIKRHFNNMREVRYES
Ga0222717_1016105023300021957Estuarine WaterMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCPTCDAFYEVDVVINRHFETMREVVFE
Ga0222718_1019108723300021958Estuarine WaterMCLQKCPKCNQDHIHYVGDNCTGEIEDWHCMTCDTFYEVDVNIHRHFETMREVVFE
Ga0222714_1055054123300021961Estuarine WaterMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCPTCDAFYEVDVVIN
Ga0222719_1029237423300021964Estuarine WaterMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCMTCDTFYEVDVNIHRHFET
Ga0196889_103569113300022072AqueousMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMR
Ga0196889_105232623300022072AqueousMCLQKCPKCNEDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMK
Ga0196889_108886823300022072AqueousMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNI
Ga0196889_110593313300022072AqueousNEDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVVFE
Ga0224906_1011691103300022074SeawaterMCVQRCPKCNEGDLHYLGDNCTGEIEDWGCPNCDTCYEVEVEINRHFENMREVVV
Ga0224906_103478133300022074SeawaterMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVEVVINRHFDTMREVVI
Ga0255752_1034081023300022929Salt MarshMCLQKCPKCNQDFIHYLGDNCTGEIEDWHCPTCDAHYEVDVVINRHFETMREGK
Ga0209992_1006311633300024344Deep SubsurfaceMCVQRCPKCNEEDIHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFETMREVVL
Ga0208667_102447923300025070MarineMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVVV
Ga0209535_119751313300025120MarineMCVQRCPKCNEDDIHYLGDNCTGEMEDWHCPNCDTHYEVDVEINRHFETMREVVV
Ga0209348_102948143300025127MarineMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVDVVINRHFDSMREVVV
Ga0209348_118102423300025127MarineMCVQRCPKCNEGDLHYLGDNCTGEIEDWGCPKCDTCYEVDVDINRHFETMREVVV
Ga0208919_104136423300025128MarineMCVQRCPKCNEDDLHYLGDNCTGEIEDWGCPKCDTCYEVDVDINRHFETMREVVV
Ga0209336_1002545433300025137MarineMCVQKCPKCNQDHIHYLGDNCTGEMEDWHCPNCDTHYEVDVVINRHFENMREVVL
Ga0209634_102946013300025138MarineMCVQRCPKCNEDDIHYLGDNCTGEMEDWHCPNCDTHYEVDVEINRHFETMREV
Ga0209337_118751423300025168MarineMCVRKCPKCNQDHIHYLGDNCTGEMEDWHCPNCDTHYEVDVVINR
Ga0208182_104663323300025251Deep OceanMCVQRCPKCNEDDLRYQGDICTGEMEEWSCPNCETEYVVEVDINRHFDTMREVVV
Ga0208029_101116353300025264Deep OceanMWVQRCPKCNEDDLRYQGDICTGEMEEWSCPNCETEYVVEVDINRHFDTMREVVV
Ga0208315_113504623300025286Deep OceanMCVQRCPKCNEEDIHYLGDNCTGEIEDWHCPNCDTHYEVDVVIN
Ga0208315_115737913300025286Deep OceanMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVEVDINRHFDTMREVVV
Ga0208684_111514813300025305Deep OceanMCVQRCPKCNEEDIHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFDTMREVVL
Ga0208148_1000044163300025508AqueousMCLQKCPKCNEDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVVFE
Ga0208148_106920223300025508AqueousMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVEVDINRHFDTMREAVI
Ga0208004_111146613300025630AqueousMCLQKCPKCNQDHIHYLGDNCTGEIEDWHCPTCDAHYEVDVVINRHFETMREVVFE
Ga0208643_111663813300025645AqueousMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHF
Ga0208545_112057823300025806AqueousMCLQKCPKCNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDV
Ga0183748_102660863300029319MarineMCVQRCPKCNEEDLHYLGDNCTGEIEDWHCPNCDTHYEVDVVINRHFETMREVVV
Ga0183748_102949123300029319MarineMCLQKCPKCNQDFIHYLGDNCTGEIEDWHCPTCDTHYEVDVVINRHFETMREVVFE
Ga0183757_100899833300029787MarineMCVQRCPKCNEADLHYLGDNCTGEIEDWGCPNCDTCYEVDVVINRHFDTMREVVV
Ga0307488_1028022323300031519Sackhole BrineMCVQRCPKCNEDDIHYLGDNCTGEMEDWHCPNCDTHYEVDVEINRHFENMREVVV
Ga0316202_1048289823300032277Microbial MatNQDHIHYLGDNCTGEMEDWHCQTCDAHYEVDVNIHRHFETMREVVFE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.