Metagenome / Metatranscriptome Family F086253

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086253
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	79 residues
Representative Sequence	MCESMDKNRILGASAGRAGNLPRSPYPSRVRSVDPAAVHRRRLSLPQEICSVSLRRLRLSKGGLTAGQKSAEGILGHDV
Number of Associated Samples	105
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.50 %
% of genes near scaffold ends (potentially truncated)	73.87 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.369 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.712 % of family members)
Environment Ontology (ENVO)	Unclassified (18.018 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.550 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.08% β-sheet: 0.00% Coil/Unstructured: 86.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13495	Phage_int_SAM_4	23.42
PF08388	GIIM	10.81
PF00078	RVT_1	8.11
PF14319	Zn_Tnp_IS91	2.70
PF13408	Zn_ribbon_recom	0.90
PF13366	PDDEXK_3	0.90
PF13557	Phenol_MetA_deg	0.90
PF12867	DinB_2	0.90
PF00589	Phage_integrase	0.90
PF06739	SBBP	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.37 %
Unclassified	root	N/A	30.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.37 %
Unclassified	root	N/A	30.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.37 %
Unclassified	root	N/A	30.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.32 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.01 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.31 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	3.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.80 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.90 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %
Chlamydiae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.31 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.31 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	3.60 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
unclassified Chlamydiota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → unclassified Chlamydiota	0.90 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.90 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.90 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.31 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.50 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	3.60 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Pectobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae	0.90 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.90 %
Chlamydiota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → unclassified Chlamydiota → Chlamydiota bacterium	0.90 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.90 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.90 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.50 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	3.60 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	2.70 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.90 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.90 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.90 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.90 %
Dickeya	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae → Dickeya	0.90 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.90 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	0.90 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.90 %
Chlamydiota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → unclassified Chlamydiota → Chlamydiota bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	3.60 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	2.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.90 %
Bradyrhizobium huanghuaihaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium huanghuaihaiense	0.90 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.90 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.90 %
Desulfobulbus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus	0.90 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.90 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.90 %
unclassified Opitutaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae	0.90 %
Dickeya chrysanthemi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae → Dickeya → Dickeya chrysanthemi	0.90 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.90 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.90 %
Chlamydiota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → unclassified Chlamydiota → Chlamydiota bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	3.60 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	2.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.80 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.90 %
Dickeya chrysanthemi Ech1591	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae → Dickeya → Dickeya chrysanthemi → Dickeya chrysanthemi Ech1591	0.90 %
Desulfobulbus propionicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus → Desulfobulbus propionicus	0.90 %
Opitutaceae bacterium TAV1	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TAV1	0.90 %
Bradyrhizobium huanghuaihaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium huanghuaihaiense	0.90 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.90 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.90 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.90 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.90 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.90 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.90 %
Chlamydiota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → unclassified Chlamydiota → Chlamydiota bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10086629	Not Available	666	Open in IMG/M
3300002917\|JGI25616J43925_10153323	Not Available	919	Open in IMG/M
3300002917\|JGI25616J43925_10166675	Not Available	871	Open in IMG/M
3300004633\|Ga0066395_10093493	Not Available	1434	Open in IMG/M
3300004803\|Ga0058862_12541339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	534	Open in IMG/M
3300005334\|Ga0068869_101078959	Not Available	702	Open in IMG/M
3300005456\|Ga0070678_101336612	Not Available	668	Open in IMG/M
3300005534\|Ga0070735_10812009	Not Available	551	Open in IMG/M
3300005561\|Ga0066699_10308861	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300005650\|Ga0075038_11378136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1986	Open in IMG/M
3300006028\|Ga0070717_11811616	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300006059\|Ga0075017_100800240	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300006162\|Ga0075030_100713506	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300006163\|Ga0070715_10064761	Not Available	1615	Open in IMG/M
3300006174\|Ga0075014_100902803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	529	Open in IMG/M
3300006175\|Ga0070712_101435229	Not Available	602	Open in IMG/M
3300006237\|Ga0097621_100312608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1390	Open in IMG/M
3300006640\|Ga0075527_10084963	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300006800\|Ga0066660_11463703	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006846\|Ga0075430_101537634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TAV1	547	Open in IMG/M
3300006893\|Ga0073928_10707202	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300007521\|Ga0105044_11221837	Not Available	556	Open in IMG/M
3300009081\|Ga0105098_10826621	Not Available	502	Open in IMG/M
3300009549\|Ga0116137_1098051	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300009617\|Ga0116123_1161369	Not Available	576	Open in IMG/M
3300009811\|Ga0105084_1051552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	730	Open in IMG/M
3300009826\|Ga0123355_11762653	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300009839\|Ga0116223_10214444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1172	Open in IMG/M
3300010043\|Ga0126380_12071334	All Organisms → cellular organisms → Bacteria → Proteobacteria	523	Open in IMG/M
3300010146\|Ga0126320_1341995	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300010373\|Ga0134128_10249109	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300010373\|Ga0134128_13228342	Not Available	501	Open in IMG/M
3300010400\|Ga0134122_11540960	Not Available	686	Open in IMG/M
3300012019\|Ga0120139_1165558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium huanghuaihaiense	580	Open in IMG/M
3300012201\|Ga0137365_11003639	Not Available	605	Open in IMG/M
3300012350\|Ga0137372_10762522	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012351\|Ga0137386_11256544	Not Available	515	Open in IMG/M
3300012469\|Ga0150984_116372622	Not Available	1167	Open in IMG/M
3300012951\|Ga0164300_10971694	Not Available	543	Open in IMG/M
3300012958\|Ga0164299_11611466	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300012971\|Ga0126369_10858838	Not Available	992	Open in IMG/M
3300012977\|Ga0134087_10468793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300012984\|Ga0164309_11289328	Not Available	617	Open in IMG/M
3300013102\|Ga0157371_11373181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300013831\|Ga0120126_1006426	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300014880\|Ga0180082_1114650	Not Available	616	Open in IMG/M
3300014969\|Ga0157376_10269836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1598	Open in IMG/M
3300015051\|Ga0137414_1214840	Not Available	4289	Open in IMG/M
3300016341\|Ga0182035_10936447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pectobacteriaceae → Dickeya → Dickeya chrysanthemi → Dickeya chrysanthemi Ech1591	765	Open in IMG/M
3300017934\|Ga0187803_10009890	All Organisms → cellular organisms → Bacteria → Proteobacteria	3807	Open in IMG/M
3300017942\|Ga0187808_10250286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	793	Open in IMG/M
3300017972\|Ga0187781_10039937	All Organisms → cellular organisms → Bacteria	3233	Open in IMG/M
3300017972\|Ga0187781_10349255	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300018046\|Ga0187851_10502849	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → unclassified Chlamydiota → Chlamydiota bacterium	688	Open in IMG/M
3300018476\|Ga0190274_13560516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	526	Open in IMG/M
3300019787\|Ga0182031_1464529	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300020060\|Ga0193717_1036356	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300020583\|Ga0210401_10032246	All Organisms → cellular organisms → Bacteria	4991	Open in IMG/M
3300021088\|Ga0210404_10594217	Not Available	629	Open in IMG/M
3300021180\|Ga0210396_10092664	All Organisms → cellular organisms → Bacteria	2736	Open in IMG/M
3300021420\|Ga0210394_10448503	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300021420\|Ga0210394_10742705	All Organisms → cellular organisms → Bacteria → Proteobacteria	859	Open in IMG/M
3300021444\|Ga0213878_10015652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2749	Open in IMG/M
3300023101\|Ga0224557_1006660	All Organisms → cellular organisms → Bacteria	7704	Open in IMG/M
3300024240\|Ga0224522_1156266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	520	Open in IMG/M
3300024323\|Ga0247666_1011378	Not Available	1952	Open in IMG/M
3300025940\|Ga0207691_11660665	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300025941\|Ga0207711_10576939	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300026078\|Ga0207702_12460243	Not Available	507	Open in IMG/M
3300026474\|Ga0247846_1048573	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300026557\|Ga0179587_10515736	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300027029\|Ga0208731_1035221	Not Available	549	Open in IMG/M
3300027105\|Ga0207944_1011842	Not Available	768	Open in IMG/M
3300027535\|Ga0209734_1063180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	703	Open in IMG/M
3300027616\|Ga0209106_1066083	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300027768\|Ga0209772_10123585	Not Available	804	Open in IMG/M
3300027768\|Ga0209772_10305702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	504	Open in IMG/M
3300027853\|Ga0209274_10733701	Not Available	509	Open in IMG/M
3300027903\|Ga0209488_11022509	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300028068\|Ga0255355_1043912	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300028577\|Ga0265318_10035565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfobulbus → Desulfobulbus propionicus	1914	Open in IMG/M
3300028747\|Ga0302219_10208706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	754	Open in IMG/M
3300028788\|Ga0302189_10082184	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300028788\|Ga0302189_10345201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	592	Open in IMG/M
3300028798\|Ga0302222_10144115	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	940	Open in IMG/M
3300028806\|Ga0302221_10387180	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300029944\|Ga0311352_11109735	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300029951\|Ga0311371_12607934	Not Available	510	Open in IMG/M
3300029957\|Ga0265324_10024088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	2164	Open in IMG/M
3300030399\|Ga0311353_10713702	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300030617\|Ga0311356_10416766	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300030618\|Ga0311354_11588394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	575	Open in IMG/M
3300030659\|Ga0316363_10026233	All Organisms → cellular organisms → Bacteria	3054	Open in IMG/M
3300031236\|Ga0302324_100323840	All Organisms → cellular organisms → Bacteria	2347	Open in IMG/M
3300031472\|Ga0272437_1092358	All Organisms → cellular organisms → Bacteria → Proteobacteria	2109	Open in IMG/M
3300031680\|Ga0318574_10352875	Not Available	857	Open in IMG/M
3300031708\|Ga0310686_104265234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	587	Open in IMG/M
3300031718\|Ga0307474_10695001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	803	Open in IMG/M
3300031770\|Ga0318521_10554778	Not Available	693	Open in IMG/M
3300031823\|Ga0307478_11679649	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031852\|Ga0307410_11337091	Not Available	628	Open in IMG/M
3300031896\|Ga0318551_10357757	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300031941\|Ga0310912_10913948	Not Available	675	Open in IMG/M
3300031942\|Ga0310916_10029625	All Organisms → cellular organisms → Bacteria → Proteobacteria	4003	Open in IMG/M
3300031954\|Ga0306926_10228111	All Organisms → cellular organisms → Bacteria → Proteobacteria	2311	Open in IMG/M
3300031962\|Ga0307479_10502725	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300032044\|Ga0318558_10048492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1869	Open in IMG/M
3300032051\|Ga0318532_10054461	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300032892\|Ga0335081_10190408	All Organisms → cellular organisms → Bacteria → Proteobacteria	2856	Open in IMG/M
3300032893\|Ga0335069_10522953	All Organisms → cellular organisms → Bacteria → Proteobacteria	1372	Open in IMG/M
3300033402\|Ga0326728_10815611	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.49%
Host-Associated	Host-Associated	13.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.97%
Aquatic	Environmental → Aquatic	13.51%
Plants	Host-Associated → Plants	11.71%
Human	Host-Associated → Human	0.90%
Arthropoda	Host-Associated → Arthropoda	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.66%
Peat	Environmental → Terrestrial → Peat	14.41%
Freshwater	Environmental → Aquatic → Freshwater	9.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.11%
Sediment	Environmental → Aquatic → Sediment	3.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.90%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.90%
Digestive System	Host-Associated → Human → Digestive System	0.90%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.41%
Loam	Environmental → Terrestrial → Soil → Loam	8.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.90%
Ice	Environmental → Aquatic → Freshwater → Ice	0.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.90%
Sand	Environmental → Terrestrial → Soil → Sand	0.90%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.90%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.90%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.90%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.12%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.90%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.90%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.90%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.90%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.90%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.60%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.80%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.80%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.90%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.90%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.90%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.90%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.90%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.90%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.90%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013831	Permafrost microbial communities from Nunavut, Canada - A21_5cm_6M	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300024240	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026474	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T0	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027105	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF018 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028068	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T75	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100866291	3300000793	Forest Soil	MDQTCESMNKNRILGASAGRAGNLLRSPYPSMVRSVDPAIVHGRQPNLPREICXVSLRRLRXXKDVLTAXQKSA*
JGI25616J43925_101533231	3300002917	Grasslands Soil	RIQGVSVGRVGNVPRSPYSIKDATRDSATVLGRQLELPQEICPVSLRRLRGPRGNLTAGQKSAEGVVDHVVGKTSEALQYRKGGVNR*
JGI25616J43925_101666751	3300002917	Grasslands Soil	MNKNRIQGVSVGRVGNVPRSPYSIKDATRDSATVLGRQLELPQEICPVSLRRLRGPRGNLTAGQKSAEGVVDHVVGKTSEALQYRKGGVNR*
Ga0066395_100934931	3300004633	Tropical Forest Soil	RREAGSERSMDQTCESMNKNRILGASAGRAGNLLRSPYPSMVRSVDPAIVHGRQPNLPREICTVSLRRLRLSKDVLTAAQKSA*
Ga0058862_125413391	3300004803	Host-Associated	MDKNRVQGVSVGRAGNLPRSPYPSKMRSVDPAAVHGRRLSLPQEICSASLRRLRLSKGGLTAGQKSAEGIVGHVVGKLVRHSDAERR
Ga0068869_1010789592	3300005334	Miscanthus Rhizosphere	MDKNRVQGVSVGRAGNLPRSPYPSKMRSVDPAAAHGRRLSLPQEICSASGNGLRLSKGSLTAGQKSAEGVV
Ga0070678_1013366121	3300005456	Miscanthus Rhizosphere	MDKNRVQGVSVGRAGNLPRSPYPSKMRSVDPAAAHGRRLSLPQEICSASLRRLRLSKGGLTAGQKSAEGILGHDVGKASEAL
Ga0070735_108120092	3300005534	Surface Soil	MCESMDKNRIQGASIGRAGNSSRSPYPSRVQSVDPATVHRRRLSLPQEICSASLRRLRLSKDGLTAEQKSAEGILG
Ga0066699_103088613	3300005561	Soil	MCESMNKNRIQGVSVGRAGNVPRSPYSIKDATRSRRVDSATVYRRQLELPREICPVSLRRLR
Ga0075038_113781362	3300005650	Permafrost Soil	MRESMDKNRIQGVSVGRAGDLLQSPYPSSARSVDPATVRRRRLNLPREICSVSLWRLRLSKGNLTAEQKSAEDILGHVVGKAIEALQC*
Ga0070717_118116162	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDKNRVQGASVGRAGDLPRSPYPSKMRSVDPATVHGKRLNLPQEICSVSLRRLRMLRGTLTAG*
Ga0075017_1008002401	3300006059	Watersheds	MCESMDKNRIPGVSAGRAGNLPRSPYPSRVRSVDSAAVHRRRLNLPQEICSASLRLRLSKGGLTAGQKSAEGILGHDVGKASEALRK
Ga0075030_1007135063	3300006162	Watersheds	MCESMDKNRIQGVSVGRAGNLPQSPYPSKMRNVDSAAVHRRRLNLPQEICAVSLRRLRLPKGSLTAEQKSAAGILGYAVGKASEALQRRK
Ga0070715_100647611	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MCESMDKNRIQGVSVGRAGNLPRSPYPSKMRSVDPAAVHGRRLSLPQEICLVSLRRLRLPRGSLTAGQKSAEGKVGHVVGKVSEALEQPTRL*
Ga0075014_1009028031	3300006174	Watersheds	VEQKREPMNKNRMRGVSVGRAGVLSRSPYPSSMQNVDPVVVRGRRLKLPREICPVSRKRLSAPRGVRSAGQKSAEG
Ga0070712_1014352291	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDQMCESMDKNRIQGVSTGRAGNLPRSPYPSRERSVDPAAVHRRRLSLPQEICSVSLRRLRLSKGGLTAGQKSAKGILGHDVGKASKELISNRW*
Ga0097621_1003126081	3300006237	Miscanthus Rhizosphere	MDKNRIQGVSVGRAANLPRSPYPSKMRSVDPAAVHRRRLSLSQEICSVSPWRLRLSKGSLTAEQKSAEGIV
Ga0075527_100849632	3300006640	Arctic Peat Soil	MRESMDKNRIQGVSVGRAGNLPRSPYPSSTRSVDPATVRGRRLNLPREICSVSFRRLRLPRGILTAEQKSAEGIVGHVVGKASEALQ
Ga0066660_114637031	3300006800	Soil	MCESMDKNRIQGANAGRAGNLPRSPYPSRVRSVDSATVHRRRLNLPQEICSVSLRRLRTSKGGLTAEQK
Ga0075430_1015376341	3300006846	Populus Rhizosphere	VRVMDKNRILGASAGRAGNLPRSPYPSRVRSVDSAAVHRRRLSLPQEICSVSLRRLRLSKGGLTAEQ
Ga0073928_107072022	3300006893	Iron-Sulfur Acid Spring	MCESMDKNRIQGVSVGRVGNLPRSPYSSRMRNVDSATVHRRRLNLPQEICSVSRKRLRWPKGNLTTGQKSAEGILGHAV
Ga0105044_112218371	3300007521	Freshwater	MCEPMDKNRIQGASAGRAGDLPRSPYPSKVRSVDAAAVHGRRLNLPQEICSVSLRRLRLSKGNLTAEEKSA
Ga0105098_108266211	3300009081	Freshwater Sediment	MDQMCESMDKNRIQGASAGRAGNLPRSPYPSRVRSVDPATMHSRRLNLPQEICSVSPQRLRLSKGG
Ga0116137_10980511	3300009549	Peatland	MCESMDKNRIQGVSVGRAGNLPRSPYPSKMRSVDPAAVHGRRLSLPQEICSVSLRRLRLSKDGLTAEQKSAE
Ga0116123_11613692	3300009617	Peatland	MCESMDKNRIQGVSVGRAGNLPRSPYPSKMRSVDPAAVHGRRLSLPQEICSASLRRLRLSKGGLTAGQKSAEGIVGHDVGKASEALR
Ga0105084_10515522	3300009811	Groundwater Sand	MCASMDKNRIQGASTGRAGNVLRSPFPSRVRRVDPATVHGRRLHLPQEICVVSPRRLRPSRDGLTAAQKSADGVVGHDVGPAS
Ga0123355_117626531	3300009826	Termite Gut	MCESMDKNRILGASAGRAGNLSRSPYPSRVRSVDPATVHRRRLSLPQEICSVSLRRLGLLKGNLTAEQKSAEGILGHDVGKASEELIRFAF*
Ga0116223_102144443	3300009839	Peatlands Soil	MDQMCESMDKNRIQGASIGRAGNLPRSPYPSKVRSVDPATVHRRQLNLPQEICSASLRRLRLSKDGLTAEQKSAEGILGRDCRQD*
Ga0126380_120713341	3300010043	Tropical Forest Soil	MDKNRIQGVSVGQAAYLPQSPYPSSTRSVDPAIVRGRRLNLPREICFVPRKRLSLPQGGLTPEQKSAEGVVGLVVGKASEALRSERWSKQI
Ga0126320_13419951	3300010146	Soil	MDQTCESMDKNRIQGVSVGRAGNLPQSPYSSRMRNVDPATVRRRQLNLPQEICSVSRKRLRLPKDSLTAGQKSAEGIVGHAVGKASEALQG*
Ga0134128_102491092	3300010373	Terrestrial Soil	MCESMDKNRIPGASAGRAGNLPRSPYPSKVRSVDPATVHRRRLNLPQEICSVSLQRLRMSKGSLTAEQKSAEGKVGHDVGKASEALRNAERRSNG*
Ga0134128_132283421	3300010373	Terrestrial Soil	MCESMDKNWIQGVSVGRAGNLSRSPYPSRVRNVDSATVHRRRLSLPQEICFVSPWRLRLSKGSLTAEQKSAEGILG
Ga0134122_115409601	3300010400	Terrestrial Soil	MCESMDKNRIQGASAGRAGYLPQSPYPSKVRNVDPATVHGRQLNLPQEICSASLWRLRLSKGCL
Ga0120139_11655582	3300012019	Permafrost	LMDKNRIEGASVGRAGNVLRSPYPSRTRSVDPATVHERRLNLPREICSVSLWRLRMPRGILTAGQKSAEGVVGHAVGKASEALRTERWS
Ga0137365_110036391	3300012201	Vadose Zone Soil	MCESMDKNRIQGASAGRAGDLPRSPYPSRVRSVDPATVHRRRLSLPQEICSASLQRLRLSKGGLTAGQKSAEGILGHDVGKA
Ga0137372_107625222	3300012350	Vadose Zone Soil	MCESMDKNRIQGVSVGRAGNIPRSPYPSKMRSVDLAAVHRRWLSLPQEICPVSLRRLRSSKDGLTAEQKSA
Ga0137386_112565441	3300012351	Vadose Zone Soil	VGRAGVLSRSPYPSSMQDVDPAVVRGRRLKLPREICSVSRKRLSAPRGVLSAGQKSAEGIVGHVVGEAS
Ga0150984_1163726221	3300012469	Avena Fatua Rhizosphere	MDQMCESMDKNRIQGVSVGRAGNLPQSPYSSRMRNVDPATVRRRQLNLPQEICSVSRKRLRLPKDSLTAGQKSAEGIVGHAVGKASEALQG*
Ga0164300_109716942	3300012951	Soil	MCESMDKNRIQGVSVGRAGNLSRSPYPSRMRNVDSATVHRRQLNLPQEICFVSLRRLRLPKDSLTAEQKSAEGI
Ga0164299_116114661	3300012958	Soil	MCESMDKNRIQGASAGRAGNLPRSPYPSKVRSVDPAAVHRRRLSLPQEICSVSLRRLRLSKGGLTA
Ga0126369_108588381	3300012971	Tropical Forest Soil	MCESMDKNRILGASAGRAGNLPRSPKSIKARSVDSATVHRRRLSLPQEICSASLRRLRLSKGG
Ga0134087_104687932	3300012977	Grasslands Soil	MCESMDKNRIQGASAGRAGNLPRSPYPSRVRCVDPAAVHRRRLNLPQEICSVSRGRLRLSKGSLTAEQKSAEGVVGH
Ga0164309_112893282	3300012984	Soil	MDKNRVQGVSVGRAGNLPRSPYTSKMRSVDPAAAHGRRLSLPQEICSASGNGLRLSKGSLTAGQKSAEGIVGHDVGKASEALRM
Ga0157371_113731812	3300013102	Corn Rhizosphere	MCESMDKNRIQGASAGRAGNLSRSPYPSRMRSVDSATVHRRQLNLPQEICFVSLRRLTLSKGGVI
Ga0120126_10064262	3300013831	Permafrost	MCESMDKNRIQGVSVGRAGNLPRSPYPSKMRSVDSAAVHGRRLSLPQEICSASLRRLRLSKGNLTAGQKSAEGVVGH
Ga0180082_11146502	3300014880	Soil	MCESMDKNRIQGVSVGRAGNLPRSPYPSKMRSVDPAAVHGRRLSLPQEICSASLRRLRLSKGGLTEEQ
Ga0157376_102698363	3300014969	Miscanthus Rhizosphere	MCESMDKNRILGASAGRAGYLPRSPYPSKVRSVDSAAVHRRRLSLPQEICSVSLRRLRLSKGGLTAEQKSAE
Ga0137414_12148406	3300015051	Vadose Zone Soil	MRESMDKNRIQGMSVGRAATYVEAHIHQVRRSVDPAAVRRRRLNLPREICSVSFRRLRLSRGSLTAEQKSA*
Ga0182035_109364471	3300016341	Soil	MCESMDKNRIQGASAGRAGNLPRSPYPSRVRSVDPATVHRRRLNLPQEICSVSPRRLRLSKGGLTAGQKSAEGIVCAEQRVLLGRVQV
Ga0187803_100098903	3300017934	Freshwater Sediment	MDKNRIQGASAGRAADLPRSPYPSRTPSVEPATVHGRRLNLPREICLVSPRRLRLPRGNLTAGQKSAEGIVSGNGEGPNERSGK
Ga0187808_102502862	3300017942	Freshwater Sediment	MEQTCESMDKNRIQGVSAGRAGNLSRSPYPSRARSVDSATVHGRRLSLPQEICSASLRRLRLSKGGLTAGQKSAEGILGHDVGRLVRHS
Ga0187781_100399373	3300017972	Tropical Peatland	MDKNRIQGVSTERAANLPRSPYPSKVRNVDPAIVHGRRLSLPQEICSVSLRRLRLSKGSLTAGQKSAEGILGHDVGEAREALRMPKGGVNR
Ga0187781_103492551	3300017972	Tropical Peatland	MCESMDKNRIQGVSAGRAGNLPRSPYPSKMRSVDLAAVHRRRLSLPQEICSVSLRRLRLSKGSLTAEQKS
Ga0187851_105028491	3300018046	Peatland	MCESMDKNRILGASAGRAGNLPRSPYPSRVRSVDPAAVHRRRLSLPQEICSVSLRRLRLSKGGLTAGQKSAEGILGHDV
Ga0190274_135605161	3300018476	Soil	MRGSMNKNRIGGVSVGRAAHSPRSPYPSRTQSVNPATVRRRRLNLPREIWSVSRKRLREPRGTLTAEQK
Ga0182031_14645293	3300019787	Bog	MRESMDKNRIQGVSVGRAGNLREAHIHQVRERRSGDCAQKAIELTREICSVSLRRLRLPRGILTAEQKSAEGILGHDVGKAIEALQG
Ga0193717_10363562	3300020060	Soil	MTQGLPPRGGAEGSVEQMRESMDKNRIQGVSVGRAGNLPRSPYPSKMRGVDPAAVRRRRLNLPREICSVSFRRLRLSRGSLTAEQKSA
Ga0210401_100322466	3300020583	Soil	MCESMDKNRVQGVSVGRVGNLPRSPYPSKTRNVDPAAVHKRRLSLPQEICSASRERLRLPEGDLTAGQKSAEGILAMTSVRLVRHSDAERRSQQIGRAGNGG
Ga0210404_105942171	3300021088	Soil	VEQMRESMDKNRIQGVSVGRADNLPRSPSPSITRSVDPATVRRRRLNLPREICFVSLRRLRMPRGILTAGQKSAEGIV
Ga0210396_100926642	3300021180	Soil	MRESMDKNRIQGVSVGRAGNLPRSPYPSSTRSVDPATVRRRRLNLPREICSVSFRRLRLSRGSLTADQKSAEGILCAEQRIVQEG
Ga0210394_104485031	3300021420	Soil	MRESMDKNRIQGVSVGRAGNLPRSPYPSSTRSVDPATARRRRLNLPREIWSVSPRRLRLPRGILTAEQESAEGILG
Ga0210394_107427051	3300021420	Soil	MDQKCESMDKNRIQGVSVGRAGNLLRSPYPSKKRSVDPAAVHGRRLSLPQEICPASRRRLRLSKGDL
Ga0213878_100156523	3300021444	Bulk Soil	MRESMDKNRIQGASVGRAGYLPRSPYPSSTRSVDPAAVRRRRLNLPREICCVSLRRLRLSGGSLTAEQKSAEGIVGHVVGEANEAL
Ga0224557_10066603	3300023101	Soil	MCESMDKNRILGASAGRAGNLPRSPYPSRVRSVDPAAVHRRRLSLPQEICSVSLRRLRLSKGGLTAGQKSAEGIVRS
Ga0224522_11562662	3300024240	Soil	MCESMDKNRIPGVSAGRAGNLPRSPYPSRVRSVDSAAVHRRRLSLPQEICSASLRRLRLSKGGLTAGQKSAEGILGHDVGKAS
Ga0247666_10113783	3300024323	Soil	MDKNRIQGVSVGRAGNLPRSPYPSKMRSVDPATAHGRRLSLPQETCSVSLRRLRLSKGGLTTEQKSAEGILCAEQRIAHEG
Ga0207691_116606652	3300025940	Miscanthus Rhizosphere	MDQTCESMNKNRILGASAGRAGNLLRSPYPSRVRSVDSAIVHGRQSSLPREICFVSLQRLRLPKDSLTAE
Ga0207711_105769392	3300025941	Switchgrass Rhizosphere	SIDQTCESMNKNRILGASAGQAANVLQSPYPSKVRSVDSATVHGRQLSLPREICFVSLRRLRLLKGSLTTEQKSAEGIVGHVVG
Ga0207702_124602431	3300026078	Corn Rhizosphere	MCESMDKNRILGASAGRAGNLPRSSYPSRARSVDSATVHRRRLRLPQEICSASLRRLRLSKGGLTAGQKSAKGILSHDVGKASKE
Ga0247846_10485732	3300026474	Soil	VEQMRESMDKNRIQGVSVGRAGNLPRSPYPSSTRSVDPATVRRRRLNLPREICSVSLRRLRLPRGILTAEQKSAEG
Ga0179587_105157362	3300026557	Vadose Zone Soil	MCESMDKNRIQGASAGRAGNLPQSPYPSKVRSVDSAAVHRRRLSLPQEICSRVRNGLRLSKGGLT
Ga0208731_10352211	3300027029	Forest Soil	MRESMDKKRIQGVSVGRAGNLPRSPYPSSTRSVDPATARRRRLNLPREICSVSPRRLRLPRGILTAEQKSAEGIVGHVVGEAR
Ga0207944_10118421	3300027105	Forest Soil	MCESMDNNRIQGVSAGQAGNLPRSPYPSRVRSVDPATVHRRRLNLPQEICSVSLRRLRLSKGGLTAGQKSAEGIVGH
Ga0209734_10631801	3300027535	Forest Soil	MEQTCESMDKNRIQGVSVGRAGNLPRSPYPSKMRSVDPAAVHGRRLSLPQEICFASRERLRLPKGGLTAGQKSAEGILGQA
Ga0209106_10660831	3300027616	Forest Soil	MCEPMNKNRIQGVSAGRAGNLPRSPDPSRVQSVDPAVVHRRRLNLPQEICSVSLRRLRLSKGGLTAGQKSAEGIVGHD
Ga0209772_101235851	3300027768	Bog Forest Soil	MRESMDKNRIQGVSVGRAGDLPRSPYPSKMRSVDSAIVRGRRLNLPREICSVSLRRLRLSRGSLIAGQKSAEGIVGHVVGKAS
Ga0209772_103057021	3300027768	Bog Forest Soil	MCESMDKNRIQGVSVGRAGNLPRSPYPSKMRSVDPAAVHGRRLSLPQEICSASLRRLRLSKGGLTAGQKSAEGIVGHDVGKASEALRNRK
Ga0209274_107337011	3300027853	Soil	VEQMRESMDKNRIQGVSVGRAGNLPRSPYPSSTRSVDPATVRRRRLNLPREICFVSLRRLRMPRGILTAG
Ga0209488_110225091	3300027903	Vadose Zone Soil	MDKNRVQGASVGRAGDLPRSPYPSKMRSVDPATVHGKRLNLPQEICSVSLRRLRMPRGTLTAGQK
Ga0255355_10439122	3300028068	Soil	MRESMDKNRIQGVSVGRAGNLPRSPYPSSTRSVDPATVRRRRLNLPREICFVSLRRLRMPRGILTTEQKSAEGILGHDVGKA
Ga0265318_100355651	3300028577	Rhizosphere	MRESMDKNRIQGVSVGRAGNLPRSPYPSSRRSVDPATVRRRRLNLPREICFVSLRRLRMPRGILTAEQKSAEGILGHDVGKASEALQG
Ga0302219_102087061	3300028747	Palsa	MRESMDKNRIQGVSVGRAGNLPRSPYPSSTRSVDPATVRRRQLNLPREICFVSLRRLRMPQGILTAEQKSAEGIVGHDVGKASEALQSR
Ga0302189_100821841	3300028788	Bog	MDQMCESMDKNRIQGASAGRAGNLPRSPYPSRVRSVDSAIAHRRRLSLPQEICSVSLRRLRLSKSSLTAEQKS
Ga0302189_103452011	3300028788	Bog	MCESMDKNRVQGVSVGRAGNLPRSPYPSKMRSADPAAAHGRRLSLPQEICSVSLRRLRLPKGGLTAEQK
Ga0302222_101441152	3300028798	Palsa	MRESMDKNRIQGVSVGRAGNLPRSPYPSSTQSVDPATVRRRRLNLPREICFVSLRRLRMPRGILTAEQKSAE
Ga0302221_103871801	3300028806	Palsa	MRESMDKNRIQGVSVGPAGNLPRSQYPSSTRSVDPATVRRRRLNLPREICFVSLRRLRMPRGILTAEQKSAEGVVGHDIEKA
Ga0311352_111097351	3300029944	Palsa	MRESMDKNRIQGVSVGRAGNLPRSPFPSKMRSVDPAAVHGRRLSLPQEICFASQERLRLPKGGLTAGQKSAEGIVGQDVGKASEALRSR
Ga0311371_126079341	3300029951	Palsa	MCESMDKNRIQGVSVGRAGNLPRSPYPSMMRSVDLGAVHGRRLSLPQEICSVSLWRLRLSKGGLTPE
Ga0265324_100240882	3300029957	Rhizosphere	MRESMDKNRIQGVSVGRAGNLPRSPYPSSSRSVDPATVRRRRLNLPREICFVSLRRLRMPRGILTAEQKSAEGILGHDVGKASEALQG
Ga0311353_107137021	3300030399	Palsa	MCESMDKNRIQGVSAGRAGNLPRSPYPSKVRSVDPAAVHRRRLSLPQEICSVSLRRLRLSKGGLIAGQKS
Ga0311356_104167661	3300030617	Palsa	MRESMNKNRIQGVSVGRAGNLPRSPYPSSTRSVDPAIVRRRRLNLPREICSVSFRRLRLPRGILIAEQKSAEGIVGHDVGKASE
Ga0311354_115883941	3300030618	Palsa	MRESMDKNRIQGVSVGRAGNLPRSPYPSSTRSVDPATVRRRRLNLPREICSVSLRRLRMPRGILTAEQKSAEGIVGHDVGKAS
Ga0316363_100262333	3300030659	Peatlands Soil	MDQMCESMDKNRIQGASIGRAGNLPRSPYPSKVRSVDPATVHRRQLNLPQEICSASLRRLRLSKDGLTAEQKSAEGILGRDCRQD
Ga0302324_1003238401	3300031236	Palsa	MEQTCESMNKNRIPGASAGRAGNLPRNPYPSRVRSVDSANVHGKQLSLHQEIRSASLRRLRWPEGRLTAVNKSAEGIVCAEQHVAQEG
Ga0272437_10923581	3300031472	Rock	MCESMDKNRIQGVSVGRAGNLSRSPYPSRMRNVDSATVHRRQLNLPQEICSVSLRRLRLPKGGLTAEQKSAEGIVGYAVGKASEALNVESRR
Ga0318574_103528751	3300031680	Soil	MCESMDKNRIQGVSVGRAGDFPQSPYPSKMRSVDPAAVHRRRQSLPQEICSVSLWRLRSSKDGLTAGQ
Ga0310686_1042652342	3300031708	Soil	MCESMDKNRVPGVSVGRAGNLPRSPYPSKMRSVDAAAAHGRRLSLPQEICSASLQRLRLPKGGLTAGQKSAEGILGHVVGKAGE
Ga0307474_106950011	3300031718	Hardwood Forest Soil	MCESMDKNRIQGASAGRAGNLPRSSYPSRVRSVDPAAVHRRRLSLPQEICSVSLRRLRLSKGGLTAGQKS
Ga0318521_105547781	3300031770	Soil	MCESMDKNRILGASAGRAGHLPRSSYPSRVRSVDPATVHRRRLSLPQEICSASLRRLRLSKGSLTVEQKSAEG
Ga0307478_116796491	3300031823	Hardwood Forest Soil	MDQMCESMDKNRIQGVSAGRAGHLPQSPYPSKVGSVDSAAVHRRRLSLPQEICSVSLRRLRLSRGGLTAEQKSAE
Ga0307410_113370912	3300031852	Rhizosphere	MCESMDKNRIQGVSVGRAGNLSRSPYPSRMRNVDSATVHRRRLNLPQEICFVSLRRLRLPKDSLTAEQK
Ga0318551_103577571	3300031896	Soil	MCESMDKNRIQGASAGRAGNLLRSPYPSRVLSVDSATVHRRRLSLPQEICSVSLRRLRLSRGGLTAGQKSAEGVVCAEQRVAQEG
Ga0310912_109139481	3300031941	Soil	MCEPMNKNRIQGVSAGRAGNLPQSPDPSRVRSVDSAVVHRRRLNLPQEICSVSLRRLRLSKGGLTAGQKSAEGI
Ga0310916_100296254	3300031942	Soil	MCEPMNKNRIQGVSAGRAGNLPQSPDPSRVRSVDSAVVHRRRLNLPQEICSVSLRRLRLSKGGLTAGQKSAEGIVCAEQRVLLGRVQVPLALE
Ga0306926_102281112	3300031954	Soil	MDKNRIQGASAGRAADLPRSPYPSRVPRVEPATVHGRRLNLPREICLVSPRRLRLLKGNLTAGQKSAEGIVSGDGEGLNERSGK
Ga0307479_105027252	3300031962	Hardwood Forest Soil	MCESMDKNRIQGASAGRAGNLPRSPYPSKVRSVDPAAVHRRRLSLPQEICFVSVNGLRLSQGGLTAGQRSAEGKVGHD
Ga0318558_100484923	3300032044	Soil	MCESMDKNRIQGVSVGRAGDFPQSPYPSKMRSVDPAAVHRRRQSLPQEICSVSLC
Ga0318532_100544611	3300032051	Soil	MEQTCESMDKNRIQGASAGRAGDLPRSSYPSRVRSVDPAIAHGRRLRLPQEICSVSPRRLRLSKDGLIA
Ga0335081_101904083	3300032892	Soil	MCESMNKNRILGASAGRAGNLPRSPYPSRVRSVDPAAVHRRQLSLPQEICSVSLRRLRLPKGGLIAEQKSAEGILGHDCRQG
Ga0335069_105229533	3300032893	Soil	MCESMDKNRVLGASAGRAGNLPRSPYPSKVRSVDSAAVHRRRLSLPQGICSASLRRLRLSKGSLTAGQKSAEGILGHDVGKASEALRMPK
Ga0326728_108156112	3300033402	Peat Soil	MCESMDKNRILGASAGRAGNLPRSPYPSKVRSVDPAAVHRRRLSLPQEICSVSGNGLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086253

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences