Metagenome Family F086141

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F086141
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	158 residues
Representative Sequence	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAVKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Number of Associated Samples	87
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	43.24 %
% of genes near scaffold ends (potentially truncated)	46.85 %
% of genes from short scaffolds (< 2000 bps)	90.99 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (54.955 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (18.919 % of family members)
Environment Ontology (ENVO)	Unclassified (45.045 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.054 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.04% β-sheet: 30.89% Coil/Unstructured: 46.07%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00990	GGDEF	50.45
PF13417	GST_N_3	1.80
PF01425	Amidase	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
All Organisms	root	All Organisms	45.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
cellular organisms	root	All Organisms → cellular organisms	45.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.24 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.60 %
Candidatus Thermoplasmatota	phylum	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Thermoplasmata	class	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	1.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	30.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Thermoplasmatales	order	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales	1.80 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.90 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	29.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
unclassified Thermoplasmatales	no rank	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales	1.80 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.90 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	27.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Thermoplasmatales archaeon BRNA1	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon BRNA1	1.80 %
Baekduiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae	0.90 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.90 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	27.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Thermoplasmatales archaeon BRNA1	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon BRNA1	1.80 %
unclassified Vibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → unclassified Vibrio	0.90 %
Baekduia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia	0.90 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	17.12 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	4.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Thermoplasmatales archaeon BRNA1	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon BRNA1	1.80 %
Vibrio sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → unclassified Vibrio → Vibrio sp.	0.90 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	0.90 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.95 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	17.12 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	4.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Thermoplasmatales archaeon BRNA1	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon BRNA1	1.80 %
Vibrio sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → unclassified Vibrio → Vibrio sp.	0.90 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	0.90 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003987\|Ga0055471_10020457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1581	Open in IMG/M
3300004643\|Ga0062591_100615043	Not Available	963	Open in IMG/M
3300005327\|Ga0070658_10425193	Not Available	1143	Open in IMG/M
3300005329\|Ga0070683_101363437	Not Available	682	Open in IMG/M
3300005333\|Ga0070677_10363618	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon BRNA1	753	Open in IMG/M
3300005338\|Ga0068868_100557258	Not Available	1011	Open in IMG/M
3300005347\|Ga0070668_100353202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1245	Open in IMG/M
3300005353\|Ga0070669_101016331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	712	Open in IMG/M
3300005354\|Ga0070675_101770469	Not Available	570	Open in IMG/M
3300005356\|Ga0070674_100209875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	1509	Open in IMG/M
3300005364\|Ga0070673_100463215	Not Available	1142	Open in IMG/M
3300005366\|Ga0070659_101475553	Not Available	606	Open in IMG/M
3300005438\|Ga0070701_11013180	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon BRNA1	580	Open in IMG/M
3300005441\|Ga0070700_100042678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2786	Open in IMG/M
3300005466\|Ga0070685_10091139	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300005466\|Ga0070685_10175001	Not Available	1377	Open in IMG/M
3300005547\|Ga0070693_100242469	Not Available	1191	Open in IMG/M
3300005618\|Ga0068864_101854506	Not Available	608	Open in IMG/M
3300005844\|Ga0068862_100826095	Not Available	907	Open in IMG/M
3300006058\|Ga0075432_10051375	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300006169\|Ga0082029_1106731	Not Available	1189	Open in IMG/M
3300006871\|Ga0075434_100895304	Not Available	902	Open in IMG/M
3300006876\|Ga0079217_11543499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → unclassified Vibrio → Vibrio sp.	527	Open in IMG/M
3300006881\|Ga0068865_100123875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1926	Open in IMG/M
3300006918\|Ga0079216_10167497	Not Available	1166	Open in IMG/M
3300009094\|Ga0111539_10526117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	1378	Open in IMG/M
3300009094\|Ga0111539_10596659	Not Available	1286	Open in IMG/M
3300009100\|Ga0075418_11007781	Not Available	901	Open in IMG/M
3300009100\|Ga0075418_12769778	Not Available	535	Open in IMG/M
3300009148\|Ga0105243_10793858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	932	Open in IMG/M
3300009156\|Ga0111538_10150078	All Organisms → cellular organisms → Bacteria	2961	Open in IMG/M
3300009176\|Ga0105242_10354181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1357	Open in IMG/M
3300009789\|Ga0126307_10041191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3586	Open in IMG/M
3300009789\|Ga0126307_10149138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1871	Open in IMG/M
3300009789\|Ga0126307_10316316	Not Available	1256	Open in IMG/M
3300009789\|Ga0126307_10578188	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300009840\|Ga0126313_10021702	All Organisms → cellular organisms → Bacteria	4282	Open in IMG/M
3300009840\|Ga0126313_10097404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2157	Open in IMG/M
3300010036\|Ga0126305_10564740	Not Available	763	Open in IMG/M
3300010038\|Ga0126315_10002859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7237	Open in IMG/M
3300010039\|Ga0126309_10130456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	1329	Open in IMG/M
3300010040\|Ga0126308_10014366	All Organisms → cellular organisms → Bacteria	4118	Open in IMG/M
3300010040\|Ga0126308_10181606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1344	Open in IMG/M
3300010040\|Ga0126308_10208798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1257	Open in IMG/M
3300010041\|Ga0126312_10370133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1017	Open in IMG/M
3300010041\|Ga0126312_10712270	Not Available	725	Open in IMG/M
3300010041\|Ga0126312_11226086	Not Available	553	Open in IMG/M
3300010044\|Ga0126310_11164027	Not Available	617	Open in IMG/M
3300010045\|Ga0126311_10481546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	968	Open in IMG/M
3300010166\|Ga0126306_10278938	Not Available	1282	Open in IMG/M
3300010166\|Ga0126306_10626763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	858	Open in IMG/M
3300010166\|Ga0126306_10774598	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300010166\|Ga0126306_11125052	Not Available	643	Open in IMG/M
3300010375\|Ga0105239_11072494	Not Available	927	Open in IMG/M
3300010399\|Ga0134127_11308970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	794	Open in IMG/M
3300011119\|Ga0105246_11041051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	744	Open in IMG/M
3300017792\|Ga0163161_10682400	Not Available	854	Open in IMG/M
3300018422\|Ga0190265_10878973	Not Available	1019	Open in IMG/M
3300018432\|Ga0190275_10301591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1571	Open in IMG/M
3300018432\|Ga0190275_10330571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1507	Open in IMG/M
3300018432\|Ga0190275_10357728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1454	Open in IMG/M
3300018466\|Ga0190268_10590982	Not Available	784	Open in IMG/M
3300018469\|Ga0190270_10101402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2207	Open in IMG/M
3300018469\|Ga0190270_12884332	Not Available	543	Open in IMG/M
3300019356\|Ga0173481_10611565	Not Available	575	Open in IMG/M
3300019377\|Ga0190264_10228456	Not Available	1056	Open in IMG/M
3300020181\|Ga0196958_10062707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	1173	Open in IMG/M
3300025901\|Ga0207688_10679221	Not Available	651	Open in IMG/M
3300025908\|Ga0207643_10208129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1193	Open in IMG/M
3300025909\|Ga0207705_11505924	Not Available	509	Open in IMG/M
3300025917\|Ga0207660_11701113	Not Available	507	Open in IMG/M
3300025919\|Ga0207657_10174330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1741	Open in IMG/M
3300025920\|Ga0207649_10101997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1901	Open in IMG/M
3300025925\|Ga0207650_11502409	Not Available	572	Open in IMG/M
3300025927\|Ga0207687_11567006	Not Available	566	Open in IMG/M
3300025933\|Ga0207706_10217336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1674	Open in IMG/M
3300025935\|Ga0207709_10297994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1198	Open in IMG/M
3300025935\|Ga0207709_11116162	Not Available	648	Open in IMG/M
3300025937\|Ga0207669_10311584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1201	Open in IMG/M
3300025937\|Ga0207669_10660080	Not Available	856	Open in IMG/M
3300025940\|Ga0207691_10050125	Not Available	3823	Open in IMG/M
3300025945\|Ga0207679_10931145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	795	Open in IMG/M
3300025960\|Ga0207651_10650182	Not Available	926	Open in IMG/M
3300025960\|Ga0207651_11997196	Not Available	521	Open in IMG/M
3300025972\|Ga0207668_10915334	Not Available	781	Open in IMG/M
3300026023\|Ga0207677_10523336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1029	Open in IMG/M
3300026118\|Ga0207675_100011015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	8466	Open in IMG/M
3300026121\|Ga0207683_10455258	Not Available	1180	Open in IMG/M
3300027907\|Ga0207428_11108724	Not Available	553	Open in IMG/M
3300028578\|Ga0272482_10196099	Not Available	618	Open in IMG/M
3300028587\|Ga0247828_10168494	Not Available	1114	Open in IMG/M
3300028589\|Ga0247818_10233346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1213	Open in IMG/M
3300028592\|Ga0247822_11533843	Not Available	564	Open in IMG/M
3300028597\|Ga0247820_10677603	Not Available	717	Open in IMG/M
3300028889\|Ga0247827_10235331	Not Available	1033	Open in IMG/M
3300030336\|Ga0247826_10516461	Not Available	905	Open in IMG/M
3300030336\|Ga0247826_10543656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	884	Open in IMG/M
3300031229\|Ga0299913_10865222	Not Available	875	Open in IMG/M
3300031548\|Ga0307408_102161601	Not Available	537	Open in IMG/M
3300031731\|Ga0307405_10627332	Not Available	881	Open in IMG/M
3300031824\|Ga0307413_10360976	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300031901\|Ga0307406_10389248	Not Available	1102	Open in IMG/M
3300031901\|Ga0307406_10914634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	748	Open in IMG/M
3300031903\|Ga0307407_11412531	Not Available	549	Open in IMG/M
3300031908\|Ga0310900_11621013	Not Available	548	Open in IMG/M
3300031911\|Ga0307412_11703689	Not Available	578	Open in IMG/M
3300032002\|Ga0307416_100732486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1080	Open in IMG/M
3300032002\|Ga0307416_101891573	Not Available	700	Open in IMG/M
3300032080\|Ga0326721_10319385	Not Available	873	Open in IMG/M
3300032126\|Ga0307415_101010481	Not Available	774	Open in IMG/M
3300032126\|Ga0307415_101081729	Not Available	750	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.45%
Environmental	Environmental	49.55%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.45%
Terrestrial	Environmental → Terrestrial	48.65%
Aquatic	Environmental → Aquatic	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	41.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.01%
Marine	Environmental → Aquatic → Marine	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.02%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.11%
Loam	Environmental → Terrestrial → Soil → Loam	6.31%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Sand	Environmental → Terrestrial → Soil → Sand	0.90%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.11%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.70%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.80%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.90%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	18.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	9.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.90%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055471_100204573	3300003987	Natural And Restored Wetlands	MNPQAAGELVHLWLQAHDDPATVATQRGPVSRAIRELAPDNRLAGVGQTPSGPAMAVLLDTALLVFQARPMAALNEASVPVRARLLHLSPGSAELEVTERFEDLPDLTGATKPTRVHLWQLHTTSFDLRIDGTEVVTTGVETGPDGNEHLGRAIAGLLGWKLP*
Ga0062591_1006150431	3300004643	Soil	RRLRAMNPQAAGELVHLWLQAHEDPAGVATQRGPVSRAIRELAPYGRLTGIGQTPTGPAMAVLLDTGLLVFQARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEQLGRAIAAKLGWQLP*
Ga0070658_104251931	3300005327	Corn Rhizosphere	ARRLRAMNPQAAGELVHLWLQAHEDPAGVATQRGPVSRAIRELAPDGHLTGVGQTPTGPAMAVLLDTGLLVFQARPMAALVETSVPVRCRLLSLLPGRLDLEVTERFEDLPDLDGTVKPTRVHVWQLHSEPLDLRIDGREVVHGGVESAPDANEHLGRAIAAKLGWQLP*
Ga0070683_1013634371	3300005329	Corn Rhizosphere	MNPQAAGELVHLWLQAHDDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEQLGRAIAAKLGWQLP*
Ga0070677_103636181	3300005333	Miscanthus Rhizosphere	VGLRGMNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSMPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP*
Ga0068868_1005572582	3300005338	Miscanthus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVLQARPMAAMQESSMPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP*
Ga0070668_1003532022	3300005347	Switchgrass Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDNALLVFQARPMAAMQESSVPVRCRLLPLAPGQLDLEVTERFEDRPDFSGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP*
Ga0070669_1010163311	3300005353	Switchgrass Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAG
Ga0070675_1017704691	3300005354	Miscanthus Rhizosphere	MNPQAAGELVHLWLQAHDDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEQLGRAIAAKLGWQ
Ga0070674_1002098752	3300005356	Miscanthus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSMPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP*
Ga0070673_1004632152	3300005364	Switchgrass Rhizosphere	RRAARRLRAMNPQAAGELVHLWLQAHEDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLELEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEQLGRAIAAKLGWQLP*
Ga0070659_1014755531	3300005366	Corn Rhizosphere	ARRLRAMNPQAAGELVHLWLQAHDDPADVATQRGPVSRAIRELAPDGHLTGVGQTPTGPAMAVLLDTGLLVFQARPMAALVETSVPVRCRLLSLLPGRLDLEVTERFEDLPDLDGTVKPTRVHVWQLHSEPLDLRIDGREVVHGGVESAPDANEHLGRAIAAKLGWQLP*
Ga0070701_110131801	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSMPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGK
Ga0070700_1000426784	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDLTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP*
Ga0070685_100911392	3300005466	Switchgrass Rhizosphere	MNPQAAGELVHLWLQAHEDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEQLGRAIAAKLGWQLP*
Ga0070685_101750012	3300005466	Switchgrass Rhizosphere	VSRAIRELAPDGHLVGVGQTPTGPAMAVLLDNALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAVKPTRVHLWQLHTEALDLRIDGLEVVHTGGEAGPDANERLGRAIAGKLGWQLP*
Ga0070693_1002424691	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNPQAAGELVHLWLQAHDDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEHLGRAIAAKLGWQLP*
Ga0068864_1018545062	3300005618	Switchgrass Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDLADLTGAIKPTRVHLWQLHTEALDLRIDGSEVVHAGVDAGPDPNEALGRAI
Ga0068862_1008260953	3300005844	Switchgrass Rhizosphere	PQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDLTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP*
Ga0075432_100513754	3300006058	Populus Rhizosphere	RAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFQARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEQLGRAIAAKLGWQLP*
Ga0082029_11067313	3300006169	Termite Nest	MNPQAAGELVHLWLQAHEDPSSVATQRGPVSRAIRELAPDGHLAGVGQTPTGPAMAVLLDGGLLVFQARPMAALTETAVPVRCRLLPLAHGKVDLEVTERFEDLPDLDSAVKPTRVHVWQLHTEAVDLRIDGREVVHGGVESGPDANEQLGRAIALKLGWRLP*
Ga0075434_1008953043	3300006871	Populus Rhizosphere	WLQAHDDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEQLGRAIAAKLGWQLP*
Ga0079217_115434991	3300006876	Agricultural Soil	MNPQAAGELVHLWLAAHDDPASVAVQRGPVSRAVRELAPDNRLVGVGQTPTGPAMAVLLDTGLLVFQARPMAALNETSVPVRCRLLHLIPATVSLEVTERFEDMADLTGTVKPTRVHLWQLHSDDLDLRIDGTEVVHAGVETGPDPNEQLG
Ga0068865_1001238753	3300006881	Miscanthus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAVKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP*
Ga0079216_101674972	3300006918	Agricultural Soil	MNPQAAGELVHFWLQAHDDPASVASQRGPVSRAVRELAPDNRLVGVGQTPSGPAMAVLLDSGLLVFRARPMAALDDSSMPVRCRLLHLMPGTLELEVTERFEDRPDHEGTVKPTRVHLWQLHTDNLDLRIDGTEVVHAGVETGPDPNEQLGRAIAEKLGWQLP*
Ga0111539_105261172	3300009094	Populus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHSEALDVRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP*
Ga0111539_105966592	3300009094	Populus Rhizosphere	MNPQAAGELVHLWLQAHDDPAAVATQRGPVSRAIRELAPDGHMTGVGQTPTGPAMAVLLDTGLLVFQARPMAALVETSVPVRCRLLSLLPGRLDLEVTERFEELPDLDGTVRPARVHVWQLHSEPLDLRIDGREVVHGGVEAGPDANEQLGRAIAARLGWQLP*
Ga0075418_110077812	3300009100	Populus Rhizosphere	MNPQAAGELVHFWLQAHDDPESVASQRGPVSRAVRELAPDSRLVGVGQTPSGPAMVVLLDTGLLVFQARPMAALVETSVPVRCRLLPLLPAKLDLEVTERFEDVADLDGAVKPTRVHLWQLHTEGLDLRIDGTEVVHAGVESGPDPNEHLGRAVAGKLGWPLP*
Ga0075418_127697781	3300009100	Populus Rhizosphere	VHFWLQAHDDPESVASQRGPVSRAVRELAPDSRLVGVGQTPSGPAMAVLLDTGLLVFQARPMAALNETAVPVRCRLLHITPGTIDLEVTERFEERPDHTGAIKPTRVHLWQLHTEGLDLRIDGTEVVHAGVETGPDPNEQLGRAIAAKLGWTLP*
Ga0105243_107938582	3300009148	Miscanthus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERL
Ga0111538_101500784	3300009156	Populus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHASGEAGPDANERLGRAIAGKLGWQLP*
Ga0105242_103541812	3300009176	Miscanthus Rhizosphere	MNPQAAGELVHLWLQAHDDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVESAPDANEHLGRAIAAKLGWQLP*
Ga0126307_100411915	3300009789	Serpentine Soil	MNPQAAGELVQLWLQAHDDPASVASHRGPISRAVRELAPDGHLVGVGQTPTGPAMAVLLDTGLLVIQARPLAALNEASVPVRARLLHLMPGTIELEVTERFEDRPDLTGAVKPTRVHLWQLHTEGFDLRIDGTEVVHAGVESGPDPNEHLGRAIAGKLGWPLP*
Ga0126307_101491382	3300009789	Serpentine Soil	MNPQAAGELVQLWLEAHDDPSSVASQRGPVSRAIRELAPDGRLVGIGQTPMGPAMAVLLDAALLVFQSRPLAALNDTSTPVRARLVHLLPGSVGIEVTERFEDRPEPTRVHLWQLHADGLDLRIDGSEIVHAGVEAGPDANETLGRAIAGKLGWPLP*
Ga0126307_103163162	3300009789	Serpentine Soil	MNPQAAGELVHLWLQAHEDPASVATQRGPVSRAIRELAPDGHLVGVGQTTTGPAMAVLLDAGLLVFQARPAAALVETSVPVRCRLLPLLPSKLDLEVTERFEDLADLDGAVKPTRVHVWQLHTEAVDLRIDGHEVVTGAVEAGPDGNEQLGRAIAMKLGWPLP*
Ga0126307_105781882	3300009789	Serpentine Soil	MNPQAAGELVHLWLQAHEDPASVASHRGPVSRAVRELAPDGRLVGVGETPTGPAMTVLLDAGVLVIQTRPLAALDDTSTPVRARLVHLLPGSARIEVTERFEDRPEPTRVHLWQLHTEGLDLRIDGTEVVHAGVEAGPDANEALGRAIAGKLGWPLP*
Ga0126313_100217024	3300009840	Serpentine Soil	MNPQAAGELVHLWLQAHEDPASVATQRGPVSRAVRELAPDGHLVGVGQTTTGPAMAVLLDAGLLVFQARPMAALVETSVPVRCRLLPLLPAKLDLEVTERFEDLADLDGAVKPTRVHVWQLHTEAVDLRIDGHEVVTGGVESGPDGNEQLGRAIALKLGWELP*
Ga0126313_100974041	3300009840	Serpentine Soil	MNPQAAGELVHLWLQAHDDPSSVATQRGPVSRAIRELAPDGRLAGVGQTSAGPAMAVLLDTGLLVFQTRPMAALNETATPVRCRLLQLQAGAIDLEVTERFEDRADMTGAVQPTRVHLWQLHTEGLDLRIDGTEVVHADVETGPDLNEQLGRAIAAKLGW
Ga0126305_105647402	3300010036	Serpentine Soil	MNPQAAGELVHLWLQAHEDPASVASHRGPVSRAVRELAPDGRLVGVGETPTGPVMTVLLDAGVLVIQTRPLAALDDTSTPVRARLVHLLPGSARIEVTERFEDRPEPTRVHVWQLHTEGLDLRIDGTEVVHAGVEAGPDANEALGRAIAGELGWPLP*
Ga0126315_100028598	3300010038	Serpentine Soil	MNPQAAGELVHLWLQAHDDPSSVATQRGPVSRAIRELAPDGRLAGVGQTSAGPAMAVLLDTGLLVFQTRPMAALNETATPVRCRLLQLQAGAIDLEVTERFEDRADMTGAVQPTRVHLWQLHTEGLDLRIDGTEVVHADVETGPDLNEQLGRAIAAKLGWQLP*
Ga0126309_101304562	3300010039	Serpentine Soil	MNPQAAGELVHLWLQAHEDPASVASQRGPVSRAVRELAPDGRLVGIGQTPTGPAMAVLLDASVLIIQARPLAALDDTSTPVRARLVHLLPGSVQIEVTERFEDRPEPIRVHLWQLHTEGLDLRIDGTEVVHAGIEAGPDANEALGRAIAGKLGWPLP*
Ga0126308_100143666	3300010040	Serpentine Soil	MNPQAAGELVQLWLEAHDDPSRVASQRGPVSRAIRELAPDGRLVGIGQTSAGPAMAVLLDAALLVFQSRPLAALDDTSTPVRARLVHLLPGSAGIEVTERFEDRPEPTRVHLWQLHADGLDLRIDGREVVHVGVEAGPDANEALGRAIAGKLGWPLP*
Ga0126308_101816062	3300010040	Serpentine Soil	MNPQAAGELVQLWLQAHDDPASVASHRGPVSRAVRELAPDGHLVGVGQTPTGPAMAVLLDTGLLVIQARPLAALNEAPVPVRARLLHLMPGTIELEVTERFEDRPDLTGAVKPTRVHLWQLHTEGFDLRIDGTEIVHAGVESGPDPNEHLGRAIAGKLGWPLP*
Ga0126308_102087982	3300010040	Serpentine Soil	MNPQAAGELVHLWLQAHEDPASVASQRGPVSRAIRELAPDGRLVGVGQTPTGPAMAVLLDAGLLVFQARPMAALPDTSVPVRCRLVHLMPGSIDLEVTERFEELPDLTGAVKPTRVHVWQLHTEGLDLRIDGTEGVLAGVETGHDPNEQLGRAIAAKLGWKLP*
Ga0126312_103701331	3300010041	Serpentine Soil	MNPQAAGELVHLWLQAHDDPASVASRRGPVSRAIRELAPDGRLVGVGQTPTGPAMAVLLDTGLLVFQARPMAALDESAVPVRCRLLYLIAGQVELEVTERFEDRAELTGAVKPTRVHLWQLHTDGLDLRIDGTEVVQAGVESGPDPNEQLGRAIAEKLGWK
Ga0126312_107122701	3300010041	Serpentine Soil	AAGELVQLWLEAHDDPASVASQRGPVSRAIRELAPDGRLVGIGQTPMGPAMAVLLDAALLVFQSRPLAALNDTSTPVRARLVHLLPGSVGIEVTERFEDRPEPTRVHLWQLHADGLDLRIDGSEIVHAGVEAGPDANETLGRAIAGKLGWPLP*
Ga0126312_112260861	3300010041	Serpentine Soil	MNPQAAGELVHLWLQAHDDPASVANQRGPVSRAVRELAPDNRLVGVGQTPSGPAMAVLLDTGLLVFQARPMAALVETSVPVRCRLLPLIPAKIDLEVTERFEELPDLDGTVKPTRVHVWQIHTDAVDLRIDGREVVHARVEAGPDPNEHLGRERHGDV
Ga0126310_111640271	3300010044	Serpentine Soil	MNPQAAGELVQLWLEAHDDPSSVASQRGPVSRAIRELAPDGRLVGIGQTPTGPAMAVLLDASVLIIQARPLAALDDTSTPVRARLVHLLPGSVQIEVTERFEDRPEPTRVHLWQLHTEGLDLRIDGTEVVHGGIEAGPDAN
Ga0126311_104815461	3300010045	Serpentine Soil	MNPQAAGELVHLWLQAHEDPASVASQRGPVSRAVRELAPDGRLVGIGQTPTGPAMAVLLDASVLIIQARPLAALDDTSTPVRARLVHLLPGSVQIEVTERFEDRPEPTRVHLWQLHTEGVDLRIDGTEV
Ga0126306_102789383	3300010166	Serpentine Soil	MNPQAAGELVQLWLEAHDDPSRVASQRGPVSRAIRELAPDGRLVGIGQTPAGPAMAVLLDAALLVFQSRPLAALDDTSTPVRARLVHLLPGSAGIEVTERFEDRPEPTRVHLWQLHADGLDLRIDGREVVHVGVEAGPDANEALGRAIAGKLGWPLP*
Ga0126306_106267631	3300010166	Serpentine Soil	MNPQAAGELVQLWLQAHDDPASVASHRGPISRAVRELAPDGHLVGVGQTPTGPAMAVLLDTGLLVIQARPLAALNEASVPVRARLLHLMPGTIELEVTERFEDRPDLTGAVKPTRVHLWQLHTEGFDLRIDGTEVVHAGVESGPDPNEHLG
Ga0126306_107745981	3300010166	Serpentine Soil	MNPQAAGELVHLWLQAHEDPASVASHRGPVSRAVRELAPDGRLVGVGQTPTGPAMAVLLDAGVLVIQTRPLAALDDTSTPVRARLVHLLPGSARIEVTERFEDRPEPTRVHVWQLHTEGLDLRIDGTEVVHAGVEAGPDANEALGRAIAGELGWPLP*
Ga0126306_111250521	3300010166	Serpentine Soil	SVATQRGPVSRAVRELAPDGHLVGVGQTTTGPAMAVLLDAGLLVFQARPMAALVETSVPVRCRLLPLLPAKLDLEVTERFEDLADLDGAVKPTRVHVWQLHTEAVDLRIDGHEVVTGAVEAGPDGNEQLGRAIAMKLGWPLP*
Ga0105239_110724942	3300010375	Corn Rhizosphere	MNPQAAGELVHLWLQAHEDPAGVATQRGPVSRAIRELAPDGHLTGVGQTPTGPAMAVLLDTGLLVFQARPMAALVETSVPVRCRLLSLLPGRLDLEVTERFEDLPDLDGTVKPTRVHVWQLHSEPLDLRIDGREVVHGGVESAPDANEHLGRAIAAKLGWQLP*
Ga0134127_113089702	3300010399	Terrestrial Soil	MNPQAAGELVHLWLAAHDDPASVAAQRGPVSRAIRELAPDNRPVGVGQTPTGPAMAVLLDTGLLVFQARPMAALNETSVPVRCRLLSLMPGQADLEVTERFEDVPDLDGTVKPTRVHAWQIHTQALDLRID
Ga0105246_110410512	3300011119	Miscanthus Rhizosphere	MNPQAAGELVHLWLQAHEDPAGVATQRGPVSRAIRELAPDGHLTGVGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDA
Ga0163161_106824002	3300017792	Switchgrass Rhizosphere	LWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDNALLVFQARPMAAMQESSVPVRCRLLPLAPGRLDLEVTERFEDRPDFSGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0190265_108789732	3300018422	Soil	MNPQAAGELVHLWLQAHEDPASVAAQRGPVSRAIRELAPDGHLVGVGQTTTGPAMAVLLDTGLLVFQARPMAALVETSVPVCCRLLPLIAAKVDLEVTERFEDLADLDGAVKPTRVHVWQLHTEAVDLRIDGREVVHGGVETGPDGNEQLGRAIALKLGWQLP
Ga0190275_103015912	3300018432	Soil	MNPQAAGELVQLWLEAHEDPASVASQRGPVSRAIRELAPDGRLVGIGQTPSGPAMAVLLDAGLLVFQARPLAALDETSTPVRARLLQLFPGAVRLEVTERFEDRPEPTRVHLWQLHTDGLDLRIDGTEVVHAGIDAGPDANEALGRAIAHKLGWPLP
Ga0190275_103305712	3300018432	Soil	MNPQAAGELVHLWLAAHDDPASVAVQRGPVSRAIRELAPDNRLVGVGQTPTGPAMAVLLDTGLLVFQARPMAALNETSVPVRCRLLHLIPATVSLEVTERFEDMADLAGAVKPTRVHLWQLHTDGLDLRIDGTEVVHAGVETGPDPNEQLGRAIAAKLGWELP
Ga0190275_103577282	3300018432	Soil	MNPQAAGELVHLWLQAHEDPASVAAQRGPVSRAIRELAPDGRLVGVGQTPTGPAMAVLLDAGLLVFQARPMAALAETSVPVRCRLLPLLPAKLDLEVTERFEELADLDGAVKPTRVHVWQLHTEAVDLRIDGREVVTGGAESGPDGNEQLGRAIALKLGWELP
Ga0190268_105909822	3300018466	Soil	MNPQAAGELVHLWLQAHDDPASVAVQRGPVSRAIRELAPDGRLAGIGQTPTGPAMAVLLDTGLLVFHARPMAALNDTSVPVRCRLLHLTPATVDLEVTERFEDRADADGAIKPTRVHLWQLHTEGLDLRIDGTEVVHAGVEAGPDANEALGRAVAGKLGWPLP
Ga0190270_101014023	3300018469	Soil	MNPQAAGELVHLWLTAHDDPASVAAQRGPVSRAIRELAPDGHLVGVGQSPTGPAMAVLLDSGLLVFQARPMAALHEASVPVRCRLLQLAPGAVELEVTERFEDRPDATGAVKPTRVHLWQLHTEALDLRIDGTEVVHTGVESGPDGNELLGRAIAGQLGWVLP
Ga0190270_128843321	3300018469	Soil	RSVGCGSMNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDAALLVFQARPMAALNEASVPVRCRLLHLTPGTVDLEITERFEDRPDFTGAVKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0173481_106115652	3300019356	Soil	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLPLAPDQLDLEVTERFEDRPDFTGALEPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPD
Ga0190264_102284563	3300019377	Soil	MNPQAAGELVHLWLQAHEDPASVAAQRGPVSRAIRELAPDGHLVGVGQTTTGPAMAVLLDTGLLVFQARPMAALVETSVPVRCRLLPLIAAKVDLEVTERFEDLADLDGAVKPTRVHVWQLHTEAVDLRIDGREVVHGGVETAPDGNEQLGRAIALKLGWQLP
Ga0196958_100627071	3300020181	Soil	MNPQAAGELVHLWLQAHDDPASVASQRGPVSRAVRELAPDGRLVGIGQTPTGPAMVVLLDDALLVFQARPLAALDDTSVPVRARLLQLSVGTAELDVTERFEDRPDLAGTVKPTRVHLWQLHAGGVDLRIDGLEVVHAGVEAGPDANEALGRAIAAKLGWVLP
Ga0207688_106792212	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDLTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207643_102081293	3300025908	Miscanthus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLPLAPGQLDLEVTERFEDRPDFSGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207705_115059241	3300025909	Corn Rhizosphere	RLRAMNPQAAGELVHLWLQAHDDPAGVATQRGPVSRAIRELAPDGHLTGVGQTPTGPAMAVLLDTGLLVFQARPMAALVETSVPVRCRLLSLLPGRLDLEVTERFEDLPDLDGTVKPTRVHVWQLHSEPLDLRIGGGGEVAVRLTDGPELLRRLDHDHLVRRRPEVGDR
Ga0207660_117011131	3300025917	Corn Rhizosphere	RAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSMPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207657_101743303	3300025919	Corn Rhizosphere	MNPQAAGELVHLWLQAHDDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEQLGRAIAAKLGWQLP
Ga0207649_101019971	3300025920	Corn Rhizosphere	MNPQAAGELVHLWLQAHDDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDIPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGV
Ga0207650_115024091	3300025925	Switchgrass Rhizosphere	HDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDNALLVFQARPMAAMQESSVPVRCRLLPLAPGQLDLEVTERFEDRPDFSGAIKPTRVHLWQLHTEALDLRIDGLEVVHTGGEAGPDANERLGRAIAGKLGWQLP
Ga0207687_115670061	3300025927	Miscanthus Rhizosphere	HLWLQAHDDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEQLGRAIAAKLGWQLP
Ga0207706_102173363	3300025933	Corn Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAVKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207709_102979941	3300025935	Miscanthus Rhizosphere	LRGMNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAVKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207709_111161621	3300025935	Miscanthus Rhizosphere	MNPQAAGELVHLWLQAHDDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLDLEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGP
Ga0207669_103115841	3300025937	Miscanthus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSMPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTAALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207669_106600802	3300025937	Miscanthus Rhizosphere	MNPQAAGELVQLWLQAHDDPASVASQRGPVSRAVRELAPDGHLVGVGQTPSGPAMAVLLDAGLLVIQARPLAALHETSVPVRARLLHLMPGTIDLEVTERFEDRPDLTGAVRPTRVHLWAFHTEGLDLRIDGTEVVHAGVESGPDPNEVLGRAIAGKLGWPLP
Ga0207691_100501253	3300025940	Miscanthus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSMPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207679_109311452	3300025945	Corn Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQSRPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKL
Ga0207651_106501822	3300025960	Switchgrass Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207651_119971961	3300025960	Switchgrass Rhizosphere	RRAARRLRAMNPQAAGELVHLWLQAHEDPAGVATQRGPVSRAIRELAPDGRLTGIGQTPTGPAMAVLLDTGLLVFHARPMAALVETSVPVRARLLSLLPGQLELEVTERFEDLPDLDGTVKPTRVHVWQLHTEALDLRIDGREVVHGGVEAGPDANEQLGRAIAAKLGWQLP
Ga0207668_109153342	3300025972	Switchgrass Rhizosphere	QRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLPLAPGQLDLEVTERFEDRPDFSGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207677_105233362	3300026023	Miscanthus Rhizosphere	MNPQAAGELVHLWLQAHEDPAGVATQRGPVSRAIRELAPDGHLTGVGQTPTGPAMAVLLDTGLLVFQARPMAALVETSVPVRCRLLSLLPGRLDLEVTERFEDRPDLTGNVKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207675_1000110157	3300026118	Switchgrass Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQSRPMAAMQESSVPVRCRLLPLAPGQLDLEVTERFEDRPDLTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207683_104552583	3300026121	Miscanthus Rhizosphere	VVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAVKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0207428_111087242	3300027907	Populus Rhizosphere	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHSEALDVRIDGLEVVHAGG
Ga0272482_101960991	3300028578	Soil	MNPQAAGELVHLWLQAHEDPASVAAQRGPVSRAIRELAPDGHLVGVGQTTTGPAMAVLLDTGLLVFQARPMAALVETSVPVRCRLLPLIAAKVDLEVTERFEDLADVDGAVKPTRVHVWQLHTEALDLRIDGREVVHGGVETGPDGNEQLGRAIALKLGWQLP
Ga0247828_101684942	3300028587	Soil	MNPQAAGELVHLWLQAHDDPASVASYRGPVSRAIRELAPDGHLVGVGQTPSGPAMAVLLDTGLLVIQARPLAALHETSVPVRARLLHLMPGTIDLEVTERFEDRADLTGAVKPTRVHLWALHTEGLDLRIDGTEVVHAGVETGPDPNEVLGRAIAAKLGWPLP
Ga0247818_102333461	3300028589	Soil	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTDALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0247822_115338431	3300028592	Soil	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERFEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHTGGEAGPDTNER
Ga0247820_106776032	3300028597	Soil	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDGALLVFQARPMAAMQESSVPVRCRLLPLAPGQLDLEVTERFEDRPDLTGNVKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAIAGKLGWQLP
Ga0247827_102353311	3300028889	Soil	AGELVHLWLQAHDDPASVASYRGPVSRAIRELAPDGHLVGVGQTPSGPAMAVLLDTGLLVIQARPLAALHETSVPVRARLLHLMPGTIDLEVTERFEDRADLTGAVKPTRVHLWALHTEGLDLRIDGTEVVHAGVETGPDPNEVLGRAIAAKLGWPLP
Ga0247826_105164612	3300030336	Soil	MNPQAAGELVHLWLQAHDDPAAVATQRGPVSRAIRELAPDGHMTGVGQTPTGPAMAVLLDTGLLVFQARPMAALVETSVPVRCRLLSLLPGRLDLEVTERFEELPDLDGTVRPARVHVWQLHSEPLDLRIDGREVVHGGVEAGPDANEQLGRAIAARLGWQLP
Ga0247826_105436562	3300030336	Soil	MNPQAAGELVHLWLQAHDDPASVAVQRGPVSRAIRELSPDGRLAGIGQTPTGPAMAVLLDTGLLVFHARPMAALNEASVPVRCRLLHLTPATVDVEVTERFEDRADADGMIKPTRVHLWHLHTESLDLRIDGTEVVHAGVETGPDLNEQLGRAIATKLGWQLP
Ga0299913_108652222	3300031229	Soil	MNPQAAGELVHLWLQAHDDPASVASHRGPVSRAIRELAPDGRLVGVGQTPSGPAMAVLLDAALLVFQARPLAALHDTSVPVRARLLHLTPGTIDLEVTERFEDRPDPTGAVKPTRVHLWQLHTEALDLRIDGTEVVHAGVETGPDANEALGRAIAGKLGWQFS
Ga0307408_1021616011	3300031548	Rhizosphere	MNPQAAGELVHLWLQAHEDPASVASQRGPVSRAIRELAPDGRLVGVGQTPTGPAMAVLLDAGLLVFQARPMAALPDTSVPVRCRLVHLMPGSIDLEVTERFEELPDLTGAVKPTRVHVWQLHTEGLDLRIDGTEGVLAGVETGHDPNEQL
Ga0307405_106273321	3300031731	Rhizosphere	MNPQAAGELVHFWMQAHDDPDSVASQRGPVSRAVRELAPDNRLVGVGQTPSGPAMAVLLDTGLLVFQARPMAALNETGVPVRCRLLHLVPGSLELEVTERFEERPDHTGAIKPTRVHLWQLHTNGLDLRIDGSEVVHADVETGPDLNEQLGRAIAEKLGWQLP
Ga0307413_103609763	3300031824	Rhizosphere	MNPQAAGELVHLWLQAHEDPSSVATQRGPVSRAVRELAPDGHLVGVGQTTAGPAMAVLLDAGLLVFQARPMAALVETSVPVRCRLLPLLPAKLDLEVTERFEDLPDLDGAVKPTRVHLWQLHTEAVDLRIDGREVVHGGVETGPDGNEQLGRAIALKLGWQLP
Ga0307406_103892481	3300031901	Rhizosphere	MNPQAAGELVQLWLQAHDDPASVATHRGPVSRAVRELAPDGHLVGVGQTPTGPAMAVLLDTGLLVIQARPLAALNEAPVPVRARLLHLMPGTIELEVTERFEDRPDLTGAVKPTRVHLWQLHTEGLDLRIDGTEVVHAGVESGPDPNEHLGRAIAGKLGWPLP
Ga0307406_109146341	3300031901	Rhizosphere	MNPQAAGELVHLWLQAHEDPASVASQRGPVSRAIRELAPDGRLVGVGQTPTGPAMAVLLDAGLLVFQARPMAALPDTSVPVRCRLVHLMPGSIDLEVTERFEELPDLTGAVKPTRVHVWQLHTEGLDLRIDGTEGVLAGVETGHDPNEQLGRAIAA
Ga0307407_114125312	3300031903	Rhizosphere	MNPQAAGELVHLWLQAHDDPAGVATQRGPVSRAVRELAPDGRLAGIGQTPTGPAMAVLLDTGLLVFHARPMAALDDTSVPVRCRLLQLAPETVDLEVTERFEDRQDHTGTVKPTRVHLWQLHTDGLDLRIDGTE
Ga0310900_116210131	3300031908	Soil	MNPQAAGELVQLWLEAHDDPASVVTQRGPVSRAIRELAPDGHLVGVGQTPTGPAMAVLLDSALLVFQARPMAAMQESSVPVRCRLLSLMPGQLDLEVTERLEDRPDFTGAIKPTRVHLWQLHTEALDLRIDGLEVVHAGGEAGPDANERLGRAI
Ga0307412_117036891	3300031911	Rhizosphere	MNPQAAGELVHLWLQAHEDPASVASQRGPVSRAIRELAPDGRLVGVGQTPTGPAMAVLLDAGLLVFQARPMAALPDTSVPVRCRLVHLMPGSIDLEVTERFEELPDLTGAVKPTRVHVWQLHTEGLDLRIDGTEGVLAGVETGHDPNEQLGRAIAAKLG
Ga0307416_1007324862	3300032002	Rhizosphere	MNPQAAGELVHLWLQAHEDPASVASQRGPVSRAIRELAPDGRLVGVGQTPTGPAMAVLLDAGLLVFQARPMAALPDTSVPVRCRLVHLMPGSIDLEVTERFEELPDLTGAVKPTRVHVWQLHTEGLDLRIDGTEGVLAGVETGHDPNEQLGRAIAAKLGWKLP
Ga0307416_1018915731	3300032002	Rhizosphere	MNPQAAGELVQLWLQAHEDPSSVATQRGPVSRAIRELAPDGHLVGVGQTPTGAAMAVLLDTALLVFQARPMAALVETSVPVRCRLLPLLPAKLDLEVTERFEDLPDLDGAVKPTRVHLWQLHTEAVDLRIDGREVVHGGVETGPDGNE
Ga0326721_103193851	3300032080	Soil	RGTPRPLGARGRVGCAPMNPQAAGELVHLWLQAHEDPASVATQRGPVSRAIRELAPDGHLVGVGQTTTGPAMAVLLDAGLLVFQARPMAALVETSVPVRCRLLPLLPAKLDLEVTERFEDLADLDGAVKPTRVHVWQVHTEAVDLRIDGREVVTGGVEAGPDGNEQLGRAIALKLGWELP
Ga0307415_1010104811	3300032126	Rhizosphere	RLRAMNPQAAGELVHLWLQAHEDPASVASQRGPVSRAIRELAPDGRLVGVGQTPTGPAMAVLLDTGLLVIQARPLAALNEAPVPVRARLLHLMPGTIELEVTERFEDRPDLTGAVKPTRVHLWQLHTEGLDLRIDGTEVVHAGVETGPDPNEQLGRAIAAKLGWTLP
Ga0307415_1010817291	3300032126	Rhizosphere	MNPQAAGELVQLWLQAHEDPSSVATQRGPVSRAIRELAPDGHLVGVGQTPTGAAMAVLLDTALLVFQARPMAALLETSVPVRCRLLPLLPAKLDLEVTERFEDLADLDGAVKPTRVHVWQLHREAVDLRIDGHEVVTGGVESGPDGNEQLGRAIALKLGWELP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086141

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences